mRNA_C-tenellus_contig11710.5.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig11710.5.1
Unique NamemRNA_C-tenellus_contig11710.5.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig11710.5.1 vs. uniprot
Match: A0A6H5JYN6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JYN6_9PHAE)

HSP 1 Score: 525 bits (1353), Expect = 9.060e-186
Identity = 259/280 (92.50%), Postives = 272/280 (97.14%), Query Frame = 1
Query:    1 MSHRKFEAPRHGSLGFLPKKRTKKHHGHIRSFPRDDAGKEPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTVLETPPMVVVGMVGYVETPRGLRTLTTVWAGHLSDECKRRFYKHWYKSKKKAFTRYAKKFAEAPQEIDAELERIKKYCQVVRVIAHTQVGLVKLRQKAANIMEIQINGGDIAAKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTEVKK 840
            MSHRKFEAPR+GSLGFLPKKRTKKH GHIRSFP+DDA KEPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVT+LETPP+VVVG+VGYVETP+GLRTLTTVWAGHLSDECKRRFYKHWY SKKKAFTRYAKKFA+APQEIDAEL RIK+Y QVVRVIAHTQ+GLVKLRQK A+I EIQ+NGGD+AAKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTE+ K
Sbjct:   31 MSHRKFEAPRNGSLGFLPKKRTKKHRGHIRSFPKDDAAKEPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTILETPPIVVVGVVGYVETPKGLRTLTTVWAGHLSDECKRRFYKHWYTSKKKAFTRYAKKFADAPQEIDAELGRIKQYAQVVRVIAHTQIGLVKLRQKKAHICEIQVNGGDVAAKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTELNK 310          
BLAST of mRNA_C-tenellus_contig11710.5.1 vs. uniprot
Match: A0A835YUS8_9STRA (Ribosomal protein L3 superfamily protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUS8_9STRA)

HSP 1 Score: 482 bits (1241), Expect = 3.570e-169
Identity = 238/280 (85.00%), Postives = 259/280 (92.50%), Query Frame = 1
Query:    1 MSHRKFEAPRHGSLGFLPKKRTKKHHGHIRSFPRDDAGKEPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTVLETPPMVVVGMVGYVETPRGLRTLTTVWAGHLSDECKRRFYKHWYKSKKKAFTRYAKKFAEAPQEIDAELERIKKYCQVVRVIAHTQVGLVKLRQKAANIMEIQINGGDIAAKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTEVKK 840
            MSHRKFEAPR GSLGFLPKKRTKKH G IRSFPRDDA K   LTAFMAYKAGMTH+ REV+RPGSK+HKKE VEAVT+LETPPMVVVG+VGYVETPRGLRTLTTVWA HLSDE +RRFYK+WYKSKKKAFTRYAKK AE+P E++ ELERIKKYCQVVRVIAHTQVGLVKLR K A++MEIQ+NGG +A KV FARGLFE++VPVD+VFAKDECID+LGA+KGHGTEGVVTRWGVTRL RKTHRGLRKVACIG+WHPARVSFSVARAGQHGYHHRTE+ K
Sbjct:    1 MSHRKFEAPRRGSLGFLPKKRTKKHFGKIRSFPRDDASKPCQLTAFMAYKAGMTHVVREVERPGSKLHKKETVEAVTILETPPMVVVGVVGYVETPRGLRTLTTVWAEHLSDEIRRRFYKNWYKSKKKAFTRYAKKCAESPAEVEKELERIKKYCQVVRVIAHTQVGLVKLRVKKAHVMEIQVNGGSVADKVAFARGLFEKQVPVDSVFAKDECIDILGATKGHGTEGVVTRWGVTRLARKTHRGLRKVACIGSWHPARVSFSVARAGQHGYHHRTEINK 280          
BLAST of mRNA_C-tenellus_contig11710.5.1 vs. uniprot
Match: A0A7S2V865_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V865_9STRA)

HSP 1 Score: 466 bits (1200), Expect = 5.740e-163
Identity = 222/280 (79.29%), Postives = 255/280 (91.07%), Query Frame = 1
Query:    1 MSHRKFEAPRHGSLGFLPKKRTKKHHGHIRSFPRDDAGKEPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTVLETPPMVVVGMVGYVETPRGLRTLTTVWAGHLSDECKRRFYKHWYKSKKKAFTRYAKKFAEAPQEIDAELERIKKYCQVVRVIAHTQVGLVKLRQKAANIMEIQINGGDIAAKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTEVKK 840
            MSHRKFEAPRHGSLGFLPKKRTK HHG IR+FP+DDA K PHLTAFMAYKAGMTHI REV+RPGSK+HKKEVVEAVT++E PPM+VVG+VGYVETPRGLR+LTTVWA HLS+ECKRRFYK+WYKSK+KAFT+YAKK+ ++P ++D EL+R+KKYCQV+RVIAHTQ+  VKLRQK A+IMEIQ+NGG +  KVDF + LFE++V VD+VFA+DE ID +GASKGHGTEGVVTRWGVTRLPRKTHRGLRKVACIG WHPARV ++VAR GQHGYHHRTEV K
Sbjct:    1 MSHRKFEAPRHGSLGFLPKKRTKHHHGRIRTFPKDDASKPPHLTAFMAYKAGMTHIVREVERPGSKLHKKEVVEAVTIMEAPPMMVVGLVGYVETPRGLRSLTTVWAEHLSEECKRRFYKNWYKSKRKAFTKYAKKYTDSPADLDFELKRMKKYCQVIRVIAHTQIRKVKLRQKKAHIMEIQVNGGSVEDKVDFGKNLFEKEVSVDSVFAQDEVIDTIGASKGHGTEGVVTRWGVTRLPRKTHRGLRKVACIGPWHPARVPYTVARTGQHGYHHRTEVNK 280          
BLAST of mRNA_C-tenellus_contig11710.5.1 vs. uniprot
Match: H6WB96_VAULI (Ribosomal protein L3 superfamily protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB96_VAULI)

HSP 1 Score: 457 bits (1177), Expect = 2.230e-159
Identity = 222/280 (79.29%), Postives = 251/280 (89.64%), Query Frame = 1
Query:    1 MSHRKFEAPRHGSLGFLPKKRTKKHHGHIRSFPRDDAGKEPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTVLETPPMVVVGMVGYVETPRGLRTLTTVWAGHLSDECKRRFYKHWYKSKKKAFTRYAKKFAEAPQEIDAELERIKKYCQVVRVIAHTQVGLVKLRQKAANIMEIQINGGDIAAKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTEVKK 840
            MSHRKFEAPR GSLGFLPKKRTKKH G IRSFP DD  KE HLTAFMAYKAGMTHI REV+RPGSK+HKKE VE VT+LE PPMVVVG+VGY ETP GL+T+ +VWAGHLSDEC+RR YK+W+ SKKKAFT YAKKFAE P+EI+ +L++IKK+CQVVRVIAHTQVGLVKLR K A+IMEIQ+NGG +  KVDFA+GLFE+ VP+ +VF+KDECIDVLGA+KGHGT+GVV RWGVTRL RKTHRGLRKVACIG+WHPARV+FSVARAGQHGYHHRTE+ K
Sbjct:    1 MSHRKFEAPRKGSLGFLPKKRTKKHFGKIRSFPHDDPSKECHLTAFMAYKAGMTHIVREVERPGSKLHKKETVEPVTILECPPMVVVGVVGYKETPNGLKTVVSVWAGHLSDECRRRMYKNWHSSKKKAFTAYAKKFAEKPEEIERDLKKIKKHCQVVRVIAHTQVGLVKLRVKKAHIMEIQVNGGTVEEKVDFAKGLFERHVPISSVFSKDECIDVLGATKGHGTKGVVARWGVTRLARKTHRGLRKVACIGSWHPARVAFSVARAGQHGYHHRTEINK 280          
BLAST of mRNA_C-tenellus_contig11710.5.1 vs. uniprot
Match: A0A7S3Y2B0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2B0_HETAK)

HSP 1 Score: 453 bits (1165), Expect = 1.090e-157
Identity = 227/281 (80.78%), Postives = 249/281 (88.61%), Query Frame = 1
Query:    1 MSHRKFEAPRHGSLGFLPKKRTKKHHGHIRSFPRDDAGKEPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTVLETPPMVVVGMVGYVETPRGLRTLTTVWAGHLSDECKRRFYKHWYKSKKKAFTRYAKKFAEAPQ-EIDAELERIKKYCQVVRVIAHTQVGLVKLRQKAANIMEIQINGGDIAAKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTEVKK 840
            MSHRKFEAPRHGSLGFLPKKRTKKH G IRSFPRDDA K  HLTAFMAYKAGMTHI RE+D+PGSK +KKEVVEAVTVLE PPMV VG+VGYVETP GLRTLTTVWA HL +  KRRFYK+WYKSKKKAFT+YAKK+ E    +I AEL RIKKYCQVVRVIAHTQ   + LR K A+IMEIQ+NGG ++ KVDFA+ LFE+++ VD+VFAKDECIDVLGASKGHGTEGVVTRWGVTRLPRKTHRGLRKVACIGAWHP+RVSFSVAR+GQHGYHHRTE+ K
Sbjct:    1 MSHRKFEAPRHGSLGFLPKKRTKKHRGKIRSFPRDDASKPTHLTAFMAYKAGMTHIVREMDKPGSKYNKKEVVEAVTVLEAPPMVAVGVVGYVETPSGLRTLTTVWANHLDEAVKRRFYKNWYKSKKKAFTKYAKKYYEGGSGDIAAELARIKKYCQVVRVIAHTQPKKLNLRLKKAHIMEIQVNGGSVSDKVDFAQNLFEKQIEVDSVFAKDECIDVLGASKGHGTEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPSRVSFSVARSGQHGYHHRTEMNK 281          
BLAST of mRNA_C-tenellus_contig11710.5.1 vs. uniprot
Match: H3G9A1_PHYRM (Uncharacterized protein n=29 Tax=Oomycota TaxID=4762 RepID=H3G9A1_PHYRM)

HSP 1 Score: 452 bits (1163), Expect = 3.440e-157
Identity = 217/280 (77.50%), Postives = 249/280 (88.93%), Query Frame = 1
Query:    1 MSHRKFEAPRHGSLGFLPKKRTKKHHGHIRSFPRDDAGKEPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTVLETPPMVVVGMVGYVETPRGLRTLTTVWAGHLSDECKRRFYKHWYKSKKKAFTRYAKKFAEAPQEIDAELERIKKYCQVVRVIAHTQVGLVKLRQKAANIMEIQINGGDIAAKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTEVKK 840
            M HRKFEAPRHG LGFLPKKRTK H G +R FPRDDA K PHLTAFM +KAGMTHI REVDRPGSKVHKKE+VE V+++ETPPMVVVG+VGY+ETPRGLRTLTTV+A HLS+E KRRFYK+WYKSK+KAFT+YAKK+  AP +I+ EL RIKKYCQVVRV+AHTQV  VKLRQK A+++E+Q+NGG +A KVDFA+ LFE++VPV AVFAKDE IDV+G +KGHG EGV+TRWGVTRLPRKTHRGLRKVACIGAWHP+RV F+V RAGQHGYHHRTE+ K
Sbjct:    1 MGHRKFEAPRHGHLGFLPKKRTKHHRGRVRKFPRDDASKAPHLTAFMGFKAGMTHIVREVDRPGSKVHKKEIVEPVSIVETPPMVVVGVVGYLETPRGLRTLTTVFAEHLSEEIKRRFYKNWYKSKRKAFTKYAKKYQTAPADIENELNRIKKYCQVVRVLAHTQVRKVKLRQKKAHLLEVQVNGGSVADKVDFAKSLFEKQVPVTAVFAKDEMIDVIGVTKGHGIEGVITRWGVTRLPRKTHRGLRKVACIGAWHPSRVRFTVPRAGQHGYHHRTEINK 280          
BLAST of mRNA_C-tenellus_contig11710.5.1 vs. uniprot
Match: A0A8K1FED4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FED4_PYTOL)

HSP 1 Score: 450 bits (1158), Expect = 1.400e-156
Identity = 216/280 (77.14%), Postives = 248/280 (88.57%), Query Frame = 1
Query:    1 MSHRKFEAPRHGSLGFLPKKRTKKHHGHIRSFPRDDAGKEPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTVLETPPMVVVGMVGYVETPRGLRTLTTVWAGHLSDECKRRFYKHWYKSKKKAFTRYAKKFAEAPQEIDAELERIKKYCQVVRVIAHTQVGLVKLRQKAANIMEIQINGGDIAAKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTEVKK 840
            M HRKFEAPRHG LGFLPKKRTK H G +R FPRDDA K PHLTAFM YKAGMTHI REVDRPGSKVHKKEVVEAVT+LETPPMVVVG+VGY+ETPRGLRTLTTV+A HL++E KRRFYK+WY+SK+KAFT+Y+KK+   P EI+ EL RIKKYCQVVRV+ HTQ+  V LRQK A+++E+Q+NGG +A KVDFA+ LFE++VPV AVFA+DE IDV+G +KGHG EGV+TRWGV+RLPRKTHRGLRKVACIGAWHP+RV FSVARAGQHGYHHRTE+ K
Sbjct:    1 MGHRKFEAPRHGHLGFLPKKRTKHHRGRVRKFPRDDASKAPHLTAFMGYKAGMTHIVREVDRPGSKVHKKEVVEAVTILETPPMVVVGVVGYLETPRGLRTLTTVFAEHLNEEVKRRFYKNWYRSKRKAFTKYSKKYQTNPAEIENELNRIKKYCQVVRVLTHTQIRKVNLRQKKAHLIEVQVNGGSVAEKVDFAKSLFEKQVPVSAVFAQDEMIDVIGVTKGHGFEGVITRWGVSRLPRKTHRGLRKVACIGAWHPSRVRFSVARAGQHGYHHRTEINK 280          
BLAST of mRNA_C-tenellus_contig11710.5.1 vs. uniprot
Match: A0A7S2FZZ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FZZ7_9STRA)

HSP 1 Score: 444 bits (1143), Expect = 7.320e-155
Identity = 213/280 (76.07%), Postives = 248/280 (88.57%), Query Frame = 1
Query:    1 MSHRKFEAPRHGSLGFLPKKRTKKHHGHIRSFPRDDAGKEPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTVLETPPMVVVGMVGYVETPRGLRTLTTVWAGHLSDECKRRFYKHWYKSKKKAFTRYAKKFAEAPQEIDAELERIKKYCQVVRVIAHTQVGLVKLRQKAANIMEIQINGGDIAAKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTEVKK 840
            MSHRKFEAPRHGSLGFLPKKRTK H G +RSFP+DDA + PHLTAFM YKAGMTH+ REV+RPGSK H KE+V+AVT++ETPPMVVVG+VGYV T +GLRTL TVW  HL+ E KRRFYK+WY SK+KAFT+Y KK+ +APQ+I+AE+ER+K  CQV+RVIAHTQ+G + LRQK A++ME+QINGG  A KVDF R LFE++V VD+VFAKDE IDVLGA+KGHGTEGV+TRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVAR+GQ+GYHHRTE+ K
Sbjct:    1 MSHRKFEAPRHGSLGFLPKKRTKHHRGRVRSFPKDDASEAPHLTAFMGYKAGMTHVVREVERPGSKTHHKEIVDAVTIIETPPMVVVGLVGYVRTAQGLRTLNTVWTQHLNKEVKRRFYKNWYASKQKAFTKYTKKYIDAPQDIEAEIERMKSDCQVIRVIAHTQIGKIGLRQKKAHMMEVQINGGSSADKVDFGRNLFEKEVSVDSVFAKDENIDVLGATKGHGTEGVITRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARSGQNGYHHRTEMNK 280          
BLAST of mRNA_C-tenellus_contig11710.5.1 vs. uniprot
Match: A0A7S2SCP9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SCP9_9STRA)

HSP 1 Score: 444 bits (1142), Expect = 5.000e-154
Identity = 215/280 (76.79%), Postives = 248/280 (88.57%), Query Frame = 1
Query:    1 MSHRKFEAPRHGSLGFLPKKRTKKHHGHIRSFPRDDAGKEPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTVLETPPMVVVGMVGYVETPRGLRTLTTVWAGHLSDECKRRFYKHWYKSKKKAFTRYAKKFAEAPQEIDAELERIKKYCQVVRVIAHTQVGLVKLRQKAANIMEIQINGGDIAAKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTEVKK 840
            MSHRKFEAPRHGSLGFLPKKRTK H G +RSFP+DDA K  HLTAFMAYKAGMTH+ RE +RPGSKVH KEVV+AVT+LETPPMVVVG+VGYV T  GLRTLTT WAGHLSDE +RRFYK+WYKSK+KAF++Y K+F E+P E +A+L+R+K  CQV+RVIAHTQ+  + LRQK A+IMEIQ+NGG IA KVDFA GLFE++V V+ VFAKDE IDVLGA+KGHGTEGV+ RWG+TRLPRKTHRGLRKVACIGAWHP+RV+FSVAR+GQHGYHHRTE+ K
Sbjct:   10 MSHRKFEAPRHGSLGFLPKKRTKHHRGRVRSFPKDDATKPCHLTAFMAYKAGMTHVVREPERPGSKVHHKEVVDAVTILETPPMVVVGVVGYVATATGLRTLTTAWAGHLSDEVRRRFYKNWYKSKQKAFSKYTKQFKESPAETEAQLQRMKDQCQVIRVIAHTQIAKIGLRQKKAHIMEIQVNGGSIADKVDFAHGLFEKQVTVEDVFAKDENIDVLGATKGHGTEGVIARWGITRLPRKTHRGLRKVACIGAWHPSRVAFSVARSGQHGYHHRTEMNK 289          
BLAST of mRNA_C-tenellus_contig11710.5.1 vs. uniprot
Match: A0A7S4AYI8_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4AYI8_CHRCT)

HSP 1 Score: 441 bits (1133), Expect = 8.850e-153
Identity = 210/280 (75.00%), Postives = 248/280 (88.57%), Query Frame = 1
Query:    1 MSHRKFEAPRHGSLGFLPKKRTKKHHGHIRSFPRDDAGKEPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTVLETPPMVVVGMVGYVETPRGLRTLTTVWAGHLSDECKRRFYKHWYKSKKKAFTRYAKKFAEAPQEIDAELERIKKYCQVVRVIAHTQVGLVKLRQKAANIMEIQINGGDIAAKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTEVKK 840
            MSHRKFE PRHGSLGFLPKKR  +H G ++SFP+DD  K PHLTAF+AYKAGMTHI R+VD+PGSK HKKEVVEAV+VLETPPM VVG+VGYV+T  G+R LTTVWA HL+DE KRRFYK+WYK KKKAFT+Y KK+A+  ++IDAE+E+IKKYCQVVRV++HTQ+  +KL QK A++MEIQINGGD+AAKVDFA  LFE++VPVD VFA++E +DV+G +KGHG EGVV+RWGVTRLPRKTHRGLRKVACIGAWHPA+V +SVARAGQHGYHHRTE+ K
Sbjct:    1 MSHRKFERPRHGSLGFLPKKRASRHRGKVKSFPKDDPSKPPHLTAFLAYKAGMTHITRDVDKPGSKAHKKEVVEAVSVLETPPMRVVGIVGYVQTSNGIRALTTVWAEHLNDELKRRFYKNWYKCKKKAFTKYVKKYADGQKDIDAEVEKIKKYCQVVRVLSHTQIRKLKLGQKKAHLMEIQINGGDVAAKVDFALNLFEKEVPVDGVFAQNEMLDVIGVTKGHGYEGVVSRWGVTRLPRKTHRGLRKVACIGAWHPAKVQYSVARAGQHGYHHRTEMNK 280          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11710.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JYN6_9PHAE9.060e-18692.50Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YUS8_9STRA3.570e-16985.00Ribosomal protein L3 superfamily protein n=1 Tax=T... [more]
A0A7S2V865_9STRA5.740e-16379.29Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
H6WB96_VAULI2.230e-15979.29Ribosomal protein L3 superfamily protein n=1 Tax=V... [more]
A0A7S3Y2B0_HETAK1.090e-15780.78Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
H3G9A1_PHYRM3.440e-15777.50Uncharacterized protein n=29 Tax=Oomycota TaxID=47... [more]
A0A8K1FED4_PYTOL1.400e-15677.14Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2FZZ7_9STRA7.320e-15576.07Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S2SCP9_9STRA5.000e-15476.79Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4AYI8_CHRCT8.850e-15375.00Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig11710contigC-tenellus_contig11710:3065..5006 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FHR5
Preferred nameRPL3
PFAMsRibosomal_L3
Model size840
Max annot lvl2759|Eukaryota
KEGG koko:K02925
KEGG Pathwayko03010,map03010
KEGG ModuleM00177
Hectar predicted targeting categoryother localisation
Exons4
Evalue1.16e-186
EggNOG OGsCOG0087@1|root,KOG0746@2759|Eukaryota
Descriptionribosomal large subunit assembly
Cds size840
COG categoryJ
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789191.374601-CDS-C-tenellus_contig11710:3064..32141680789191.374601-CDS-C-tenellus_contig11710:3064..3214Choristocarpus tenellus KU2346CDSC-tenellus_contig11710 3065..3214 +
1680789191.3885796-CDS-C-tenellus_contig11710:3512..37121680789191.3885796-CDS-C-tenellus_contig11710:3512..3712Choristocarpus tenellus KU2346CDSC-tenellus_contig11710 3513..3712 +
1680789191.3982687-CDS-C-tenellus_contig11710:3903..40481680789191.3982687-CDS-C-tenellus_contig11710:3903..4048Choristocarpus tenellus KU2346CDSC-tenellus_contig11710 3904..4048 +
1680789191.4062338-CDS-C-tenellus_contig11710:4661..50061680789191.4062338-CDS-C-tenellus_contig11710:4661..5006Choristocarpus tenellus KU2346CDSC-tenellus_contig11710 4662..5006 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig11710.5.1prot_C-tenellus_contig11710.5.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig11710 3065..5006 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig11710.5.1

>prot_C-tenellus_contig11710.5.1 ID=prot_C-tenellus_contig11710.5.1|Name=mRNA_C-tenellus_contig11710.5.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=280bp
MSHRKFEAPRHGSLGFLPKKRTKKHHGHIRSFPRDDAGKEPHLTAFMAYK
AGMTHIAREVDRPGSKVHKKEVVEAVTVLETPPMVVVGMVGYVETPRGLR
TLTTVWAGHLSDECKRRFYKHWYKSKKKAFTRYAKKFAEAPQEIDAELER
IKKYCQVVRVIAHTQVGLVKLRQKAANIMEIQINGGDIAAKVDFARGLFE
QKVPVDAVFAKDECIDVLGASKGHGTEGVVTRWGVTRLPRKTHRGLRKVA
CIGAWHPARVSFSVARAGQHGYHHRTEVKK
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mRNA from alignment at C-tenellus_contig11710:3065..5006+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig11710.5.1 ID=mRNA_C-tenellus_contig11710.5.1|Name=mRNA_C-tenellus_contig11710.5.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1942bp|location=Sequence derived from alignment at C-tenellus_contig11710:3065..5006+ (Choristocarpus tenellus KU2346)
ATGTCTCACCGTAAGTTCGAAGCCCCCCGTCACGGGTCGCTCGGTTTCCT CCCCAAGAAGCGCACAAAAAAGCATCACGGGCACATCCGCTCGTTTCCCA GGGATGACGCCGGCAAGGAACCCCACCTAACCGCATTCATGGCATACAAG GTAGCGCCAGTCACTACCATTAACCTTGAATGGCCCGTTTTCTCACCCCA CCACTCTTCCTGTACTGCATTTTATTGTGTGTGATTGCGACCCTTTCACT TCATTGGTATTCATCTATATCCTAGTCCCCAACCTCTTATTTGCTAACAA GTGTCCAGTGCAGTACTTTGCATTGAACAGCTCAAGCAGTTTTCTTGAAC CACTGAACAATTTTGATTTCCACTCCATTCCATTCCGTAACCCTCAATGT ATAAACACCTGACAATTCTGCGTAACTTTGCACTAACGGCCCCAACAGGC CGGTATGACCCACATTGCTCGTGAAGTGGACCGCCCAGGCTCTAAGGTTC ACAAAAAAGAGGTTGTGGAGGCTGTCACTGTGCTGGAGACCCCCCCTATG GTGGTTGTTGGTATGGTTGGCTACGTCGAGACTCCTCGGGGTCTTCGCAC ACTCACCACCGTATGGGCGGGTCATTTGTCCGATGAGTGCAAGAGGAGGT GAGACGTAACGTTGATCGCCTTCTGAAGTGAATGCCAACAGGCCTACAAG TATGATCAGTAAATTCGATATATTTTAGATCTATCTGCGTGTAGTGCGCT CGTTGATCACAATGCAATCATTCTGCACTACAATTATCGCTCTATCAAAA GTTGGGAAATTAAATATCAAACTAAAACATTCCCACCAGATTCTACAAGC ACTGGTACAAGTCCAAGAAGAAGGCATTCACCAGGTACGCTAAGAAGTTC GCAGAGGCTCCCCAAGAGATTGATGCTGAGCTGGAGCGAATCAAGAAGTA CTGCCAGGTTGTGCGGGTCATTGCGCACACACAGGTGAATTCAACATTCA ATAAATTATTGAGGTTGTGTAATGCTTGCCCATAAATTCGTATTTAGATT TTTTTGTGCTACAAATGAAAGTCCAAGGCTTTGAAGATATTGTAAGTGCA TAGTTCATCTGACTTATCAGTGAAGAACTGTCATCAAGCAAATGTCTTTC GCTCCTATCTGAGCCTTGGACTTTCCCTCTTTCTGGTCTTTTTTCGGGGG AAATGTATTTATGTGCCAGGTTGCCAAGGTGTTGAGACAATGAAGATATT CTAAATGCATAGTTCATCTGACTTATCAGTGAAGAACTGTCATCAAGCAA ATGTCTTTCGCTCCTATCTGAGTCTCGAATTTTGCATCCCCTGTACATCA TTAAATCTTGTTGAGAATTCATTTGGCAGGGCCATGCCGTTGCGATTATC TCATCAACAGGTATGTATTGAAGGGCTGATGTATATCTGTTGCTTAGACG ACCAACAGTAGTGTCATCCTTTCAGACATTATTTTTCACTTGCTTCCCAA TTAGAAGCAGAGGGGAAAAAAAATGTTATTCATGGAGAGTTGAGCTAAAC CAATTCATTATTGTTCATATTCCAAACTTCAAACCTATTCTGAACAGGTG GGTCTGGTAAAGCTTCGTCAAAAGGCAGCAAACATAATGGAGATCCAGAT CAATGGTGGTGATATTGCAGCAAAGGTAGACTTTGCTCGTGGTCTCTTTG AGCAGAAGGTGCCAGTGGATGCAGTGTTTGCCAAGGACGAGTGTATTGAT GTACTGGGTGCCTCGAAGGGTCACGGAACAGAGGGAGTAGTTACCCGTTG GGGTGTGACACGTCTACCCCGTAAGACCCACCGTGGTCTTCGGAAGGTGG CGTGTATTGGAGCATGGCACCCGGCCCGTGTAAGCTTCTCAGTGGCACGT GCTGGTCAGCATGGGTACCACCACAGGACTGAGGTAAAGAAA
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Coding sequence (CDS) from alignment at C-tenellus_contig11710:3065..5006+

>mRNA_C-tenellus_contig11710.5.1 ID=mRNA_C-tenellus_contig11710.5.1|Name=mRNA_C-tenellus_contig11710.5.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=840bp|location=Sequence derived from alignment at C-tenellus_contig11710:3065..5006+ (Choristocarpus tenellus KU2346)
ATGTCTCACCGTAAGTTCGAAGCCCCCCGTCACGGGTCGCTCGGTTTCCT
CCCCAAGAAGCGCACAAAAAAGCATCACGGGCACATCCGCTCGTTTCCCA
GGGATGACGCCGGCAAGGAACCCCACCTAACCGCATTCATGGCATACAAG
GCCGGTATGACCCACATTGCTCGTGAAGTGGACCGCCCAGGCTCTAAGGT
TCACAAAAAAGAGGTTGTGGAGGCTGTCACTGTGCTGGAGACCCCCCCTA
TGGTGGTTGTTGGTATGGTTGGCTACGTCGAGACTCCTCGGGGTCTTCGC
ACACTCACCACCGTATGGGCGGGTCATTTGTCCGATGAGTGCAAGAGGAG
ATTCTACAAGCACTGGTACAAGTCCAAGAAGAAGGCATTCACCAGGTACG
CTAAGAAGTTCGCAGAGGCTCCCCAAGAGATTGATGCTGAGCTGGAGCGA
ATCAAGAAGTACTGCCAGGTTGTGCGGGTCATTGCGCACACACAGGTGGG
TCTGGTAAAGCTTCGTCAAAAGGCAGCAAACATAATGGAGATCCAGATCA
ATGGTGGTGATATTGCAGCAAAGGTAGACTTTGCTCGTGGTCTCTTTGAG
CAGAAGGTGCCAGTGGATGCAGTGTTTGCCAAGGACGAGTGTATTGATGT
ACTGGGTGCCTCGAAGGGTCACGGAACAGAGGGAGTAGTTACCCGTTGGG
GTGTGACACGTCTACCCCGTAAGACCCACCGTGGTCTTCGGAAGGTGGCG
TGTATTGGAGCATGGCACCCGGCCCGTGTAAGCTTCTCAGTGGCACGTGC
TGGTCAGCATGGGTACCACCACAGGACTGAGGTAAAGAAA
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