mRNA_C-tenellus_contig1170.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig1170.1.1 vs. uniprot
Match: A0A6H5KT61_9PHAE (Hira domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KT61_9PHAE) HSP 1 Score: 305 bits (782), Expect = 1.090e-86 Identity = 236/520 (45.38%), Postives = 293/520 (56.35%), Query Frame = 1 Query: 37 AGLGLENERGGRIGKSG-VLECSPLPQEFRSLPARRYTRVTMFRGGKVVWSNFLAGIATSCCGNSRVGAVGVEDGSIYIYDRSGTLVAPALVISPPVAYLECSGDVQDPTTSISSKYPQNRRGVVGDQLMAISGEGEVFVWDLDAMSLTVKGSLGPLMRSLSLGSSLASQSPTSTTAGKGRDQGETAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVVRAGVTSEGSPLVLMSCPGGVGGGLQVFLLHKGLGTWVRVADGRYSLSNFYGSGPCTVHAT--GLVSGLQGIVRSSARPSPSALLQASALPATHLSSSAMRGITGEGGLQVSVTRTHLEDSMACALMLGSSEEFVDILQAYAGCLAKTCVGANDARVRALCDKLLVGCRPEGDQSVLAVTVGGSEGGANGGAL------------EL-GARFGSGPTVLGVSKFKLLKEVVLPALGANRSLQRLVHEYSNELSLIN-------PPHCLSQSSAPLEVRSKSVPGNAVNGVTNGVGGGAV 1527 +G G+E RGGR V+ECS L ++F LP+RRYT VT+ RGG+ W +++AG+AT+CCGN RV AVG EDGS+Y+YDR+G AP +VISPPVAYLEC D G+ LMAISG+G+V VW+LD+M + VK SL PL RSL+ G A XXXXXXXXXXXXXXXXXXXXXXX VSV RAGVT EG PLV+++C G GG LQ F H GL TWVRVADGR +LS+FY SGPCT +T G++S LQ VRS A PSP A+LQAS A ++AM G L EF D+L+AYAG LAK+ G + RVR LCDKL++ + + V G + GG G EL G R +GP++LG+ K LL +VVLPAL NRSLQRLV EY + L ++ PP +PLE R+ P A+ + G G+V Sbjct: 660 SGAGVEGNRGGRAPSGATVMECSALDEDFGGLPSRRYTLVTVTRGGREAWRDYVAGMATACCGNDRVAAVGAEDGSVYVYDRNGVRSAPPMVISPPVAYLECC----DKXXXXXXXXXXXXAAQPGEHLMAISGDGDVTVWNLDSMRIVVKTSLSPLFRSLT---------------SSGVSPAAAAASGSXXXXXXXXXXXXXXXXXXXXXXXAKKGVSVARAGVTPEGMPLVMLACHGAPGGSLQAFTFHLGLETWVRVADGRSALSDFYSSGPCTSPSTRGGVLSALQRGVRSGASPSPGAILQAS--KAGKRPAAAMAGAPARESLXXXXXXXXXXXXXXXXXXXXXXXEFEDVLRAYAGHLAKS-AGYGEGRVRTLCDKLML--------ASIGVGKGANIGGDGGSGXXXXXXXXXXXTGELPGLRLCNGPSILGLDKLHLLSKVVLPALSGNRSLQRLVSEYYDNLEYVSKSRRQQLPPPA---PPSPLEQRTPRGPAAAIPHIAEGSSVGSV 1146
BLAST of mRNA_C-tenellus_contig1170.1.1 vs. uniprot
Match: A0A7S1VV58_9STRA (Protein HIRA n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VV58_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 7.220e-12 Identity = 81/251 (32.27%), Postives = 122/251 (48.61%), Query Frame = 1 Query: 694 VVRAGVTSEGSPLVLMSCP-------GGVGGGLQVFLLHKGLGTWVRVADGRYSLSNFYGSGPC--TVHATGLVSGLQGIVRSSARPSPSALLQASALPATHLSSSAMRGI-TGEGGLQVSVTRTHLEDSMACALMLGSSEEFVDILQAYAGCLAKTCVGANDARVRALCDKLLVGCRPEGDQSVLAVTVGGSEGGANGGALELGARFGSGPTVLGVSKFKLLKEVVLPALGANRSLQRLVHEYSNELSLI 1416 + R VT +G ++++S G GG LQ FL + L W+R+AD R+ LS+FY P T G ++G+ VR S S ++A + +SAM G +GEG L S R+H ED MACA+ LGSS EF L Y L+ +G + ++R L D ++ GD S A++ S +LG ++ L+++ V+P + NRSLQRL +E + +L I Sbjct: 513 LARIQVTDKGRLIMILSAQMTNAHHGNGPGGSLQAFLYDRSLELWMRMADSRFVLSDFYSILPSVRTASRKGDLAGMDDAVRGG---SSSGSIRAKR---RNHDTSAMYGAPSGEGNLLAS--RSHCEDRMACAVALGSSHEFESWLVNYVRALS---IGGFEDQLRLLVDLIV------GDDSREALS-----------KTPSCWWLSSATQLLGFNRKTLVRKAVIPEMSKNRSLQRLTNEIALQLDSI 735
BLAST of mRNA_C-tenellus_contig1170.1.1 vs. uniprot
Match: A0A7S2WVS7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVS7_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 3.650e-11 Identity = 117/466 (25.11%), Postives = 183/466 (39.27%), Query Frame = 1 Query: 88 VLECSPLPQEFRSLPARRYTRVTMFR-----GGKVVWSNFLAGIATSCCGNSRVGAVGVEDGSIYI-YDRSGTLVAPALVISPP--VAYLECSGDVQDPTTSISSKYPQNRRGVVGDQ---LMAISGEGEVFVWDLDAMSLTVKGSL---------GPLMRSLSLGSSLASQSPTSTTAGKGRDQGETAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVVRAGVTSEGSPLVLMSCPGGVGGGLQVFLLHKGLGTWVRVADGRYSLSNFYGSGPCTVHATGLVSGLQGIVRSSARPSP-SALLQASALPATHLSSSAMRGITGE-GGLQVSVTRTHLEDSMACALMLGSSEEFVDILQAYAGCLAKTCVGANDARVRALCDKLLVGCRPEGDQSVLAVTVGGSEGGANGGALELGARFGSGPTVLGVSKFKLLKEVVLPALGANRSLQRLVHEYSNELSLIN 1419 V+EC LP +L A + + +F G+ W L G A++ + + AVG E+G+++I + +SG + PA ++ + +L S +DP + N L+ ++ G + VWD+ + + SL P R ++ L S + R+Q +V + GS S P ++ F+LH+GLGTW+RV DGR+ S+F+ P V +G LQ +S+ P P SALL+ +H GE G Q +T HLE+ +A L SS EF + Q Y L ++R+R +CD LL S L G+ G G+ + S +LL++VV PA S QRL EYS +L ++ Sbjct: 283 VVECRSLPPA--TLAAVKASGQDVFTVAASTAGRECWRTHLHGQASTVAASQDLIAVGTEEGALHILHAQSGVRLLPAAMLGEGRGIVFLSFSTP-RDPRLAPPPLQTGNGPASTASPVCYLLIVTEGGRLLVWDMSQLRAVAEASLKSLLSPQLENPAAREPNVDRRLLSAQVETREPQDARNQ--------------------------HMLGEQVVVTVLVLSSHVLPGSG----SSPARTHSSVEAFVLHQGLGTWLRVGDGRFFASDFFSMLP-PVSKSGPAERLQAECAASSSPPPASALLRLD----SH----------GEPSGFQAGLTLAHLEERLAATAALRSSHEFREWFQRYVRALVAM---GGESRLRLVCDVLL--------SSSLQ------------GSFPPGTLLGTLSGLATDSGHELLEKVVFPACAGTSSFQRLALEYSAQLKALD 677
BLAST of mRNA_C-tenellus_contig1170.1.1 vs. uniprot
Match: A0A2K1J8U7_PHYPA (Protein HIRA n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1J8U7_PHYPA) HSP 1 Score: 75.9 bits (185), Expect = 1.800e-10 Identity = 76/257 (29.57%), Postives = 119/257 (46.30%), Query Frame = 1 Query: 688 VSVVRAGVTSEGSPLVLMSCPGGVGGGLQVFLLHKGLGTWVRVADGRYSLSNFYGSGPCTVHATGLVSGLQ-GIVRSSARPSPSALLQASALPATHLSSSAMRGITGEGGLQVSVTRTHLEDSMACALMLGSSEEFVDILQAYAGCLAKTCVGANDARVRALCDKLLVGCRPEGDQSVLAVTVGGSEGGANGGALELGARFGSGPTVLGVSKFKLLKEVVLPALGANRSLQRLVHEYSNELSLINPPHCLSQSSAPL 1455 + +V A ++ G+PL+++ F+ + G+ W+RVAD + SNF + P + G ++ LQ G+ R++ PS L +L E Q TR HLE M+ AL L S+ E+ L AY CL K +++AR+R LC++LL P G P +LG+SK +LLKE VLPA+ ANR++QRL++E+ + ++ SQS + Sbjct: 806 MKLVSARLSKAGAPLIVLV-------NRHAFIFNIGMCCWLRVADDSFPASNFVSTWPDADN--GELANLQAGVARAAG---PSFLWNRMSL--------------SEEKWQ---TRVHLEVQMSSALALKSASEYSRCLVAYVRCLTKE---SDEARLRELCEELLGPVGPVGKLQSWK------------------------PDILGLSKRELLKEFVLPAMAANRAIQRLLNEFIDLVTECEAAEKASQSGGSI 1006
BLAST of mRNA_C-tenellus_contig1170.1.1 vs. uniprot
Match: A0A1Z5JXZ9_FISSO (Protein HIRA n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JXZ9_FISSO) HSP 1 Score: 75.1 bits (183), Expect = 3.180e-10 Identity = 114/452 (25.22%), Postives = 187/452 (41.37%), Query Frame = 1 Query: 88 VLEC---SPLPQEFRSLPARRYTRVTMFRGGKVVWSNFLAGIA-TSCCGNSRVGAVGVEDGSIYIYDRS---GTLVAPALVISPPVAYLECSGDVQDPTTSISSKYPQNRRGVVGDQLMAISGEGEVFVWDL-DAMSLTVKGSLGPLMRSLSLGSSLASQSPTSTTAGKGRDQGETAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVVRAGVTSEGSPLVLMSCPGG----VGGGLQVFLLHKGLGTWVRVADGRYSLSNFYGSGPCTVHATGLVSGLQGIVRSSARPSPSALLQASALPATHLSSSAMRGITGEGGLQVSVTRTHLEDSMACALMLGSSEEFVDILQAYAGCLAKTCVGANDARVRALCDKLLVGCRPEGDQSVLAVTVGGSEGGANGGALELGARFGSGPTVLGVSKFKLLKEVVLPALGANRSLQRLVHEYSNEL 1407 ++EC S +P + P V + + V WS+ + G + T+ ++R+ A+G DGSI +Y S G L A A PP+ + SG V +S + + + Q++ ++ +G ++ + +SL KGS+ P M ++L +S + R +T L+L+S P G VGG +Q F+ + W+R+AD R+ LS+FY S P A G ++ + V+ A S L A+H ++SA+ EG TR H ED +ACA+ S E+ + + G L + D L ++++G P T G E ++ L L P +L + +L++ VVLP + NRSLQRL +E S E+ Sbjct: 689 IVECTNSSKIPSGSKGNPVPCID-VVIKKDSTVTWSDQIVGTSCTALSASNRLLAIGTADGSIQLYGNSPSIGWLAANAFRSHPPLIF---SGAV------VSLRLEETDALL---QMLVVTSDGSFGLYSVFPRLSLMKKGSILPPMTHMALSAS----------------------------------------------NKNFVYPQLSRIQITRNNQLLLLLSFPNGESRGVGGSIQSFVYNDLSELWMRLADSRFVLSDFYSSLPSRSPA-GPLTEMDDSVKLGALEST--------LKASHRNASAIYLQGSEGNFLA--TRAHCEDRLACAVAFESGPEY----RLWLGKLVRILSMTGDETGLRLLTEMILGRGP---------TNGADEDNSSCWWLSLS------PEILKQDRKELIRSVVLPEMSKNRSLQRLTNELSLEI 1051
BLAST of mRNA_C-tenellus_contig1170.1.1 vs. uniprot
Match: UPI0002C337A7 (protein HIRA-like isoform X1 n=2 Tax=Fragaria vesca subsp. vesca TaxID=101020 RepID=UPI0002C337A7) HSP 1 Score: 73.9 bits (180), Expect = 7.210e-10 Identity = 75/262 (28.63%), Postives = 120/262 (45.80%), Query Frame = 1 Query: 688 VSVVRAGVTSEGSPLVLMSCPGGVGGGLQVFLLHKGLGTWVRVADGRYSLSNFYGSGPCTVHATGLVSGLQGIVRSSARPSPSALLQASALPATHLSSSAMRGITGEGGLQVSVTRTHLEDSMACALMLGSSEEFVDILQAYAGCLAKTCVGANDARVRALCDKLLVGCRPEGDQSVLAVTVGGSEGGANGGALELGARFGSGPTVLGVSKFKLLKEVVLPALGANRSLQRLVHEYSNELSLINPPHCLSQSSAPLEVRSKS 1473 + V+ A ++ GSPLV+++ FL GL W+RVAD +S SNF S + +G ++GLQ V+ P +T +G +Q TR HLE +A L L S E+ L +Y LA+ A+++R+R +C+ L G + + S+ P VLG+SK KLL+E +LPA+ +NR +QRL++E+ + +S SA + ++SK+ Sbjct: 757 IKVISAKLSRSGSPLVVLATR-------HAFLFDMGLMCWLRVADDCFSGSNFASSWHLGLTQSGELAGLQVDVKKYLARKPG-----------------WSRVTDDG-VQ---TRAHLEAQLASLLALKSPNEYRQCLLSYIRFLARE---ADESRLREVCESFL------GPPTGMVEATSDSK------------NLAWDPFVLGMSKHKLLREDILPAMASNRKVQRLLNEFMDLIS--------EYESAEVNIKSKT 961
BLAST of mRNA_C-tenellus_contig1170.1.1 vs. uniprot
Match: A0A448YVK3_9STRA (Hira domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YVK3_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 2.350e-9 Identity = 118/449 (26.28%), Postives = 171/449 (38.08%), Query Frame = 1 Query: 151 VTMFRGGKVVWSNFLAGIATSCCGNSRVGA---VGVEDGSIYIYDRSGTL---------VAPALVISPPVAYLECSGDVQDPTTSISSKYPQNRRGVVGDQLMAISGEGEVFVWDLDA-MSLTVKGSLGPLMRSLSLGSSLASQSPTSTTAGKGRDQGETAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVVRAGVTSEGSPLVLMSCPGGVGGGLQVFLLHKGLGTWVRVADGRYSLSNFYGSGPCTVH------ATGLVSGLQGIVRSSARPSP-------SALLQASALPATHLSSSAMRGITGEGGLQVSVTRTHLEDSMACALMLGSSEEFVDILQAYAGCLAKTCVGANDARVRALCDKLLVGCRPEGDQSVLAVTVGGSEGGANGGALELGARFGSGPTVLGVSKFKLLKEVVLPALGANRSLQRLVHEYSNELSLIN 1419 +++ +GG+ +W + L G ++CC + + VG DG + IY S TL P V+ P+ L R G +L+ +S +G V+ L+ + L KGSL P M + L + L + A RAG + +P V G GG LQ F+ W+RVAD R+ LS+FY S P G +S L VR A S ++L S T ++ R E V +R+H ED MACAL LGS EF Y LA T N+ +R + D +L+G P G + E N L P VL + KL+ VV+P + NR+LQRL +E + E+ L++ Sbjct: 947 LSISKGGQSLWKDQLPG--STCCAIAASKSWLVVGTSDGCLQIYGTSPTLGWQSASAFRSHPPFVLGRPIVALHL------------------REGGAQTELLVVSSDGRFGVYVLEPRLKLLYKGSLLPAMTHVLLSADLQTDLYLPKLA--------------RIQLTETNRLLLLLSLRSASTPGRNSGPDEGRAGRGTNQAPSV------GAGGSLQGFVYDLESELWMRVADSRFVLSDFYNSLPSFSSLKKQSTTDGPLSKLDDYVRMGAGSSSLQRSRRARSILGNSVSFQTSTVTTTSRQNDDEANNDVD-SRSHCEDRMACALALGSVSEFEFWFSMYVKILALT---GNEVLLRLVID-MLMGKYPSGASN--------GEAACNSTCWWLS----ESPMVLTFDRVKLVSTVVIPEMSKNRALQRLTNEIAVEVELLH 1338
BLAST of mRNA_C-tenellus_contig1170.1.1 vs. uniprot
Match: B5Y4W6_PHATC (Protein HIRA n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y4W6_PHATC) HSP 1 Score: 72.0 bits (175), Expect = 2.980e-9 Identity = 101/410 (24.63%), Postives = 154/410 (37.56%), Query Frame = 1 Query: 88 VLECS-----PLPQEFRSLPARRYTRVTMFRGGKVVWSNFLAGIATSC-CGNSRVGAVGVEDGSIYIYDRSGTL---------VAPALVISPPVAYLECSGDVQDPTTSISSKYPQNRRGVVGDQLMAISGEGEVFVWD-LDAMSLTVKGSLGPLMRSLSLGSSLASQSPTSTTAGKGRDQGETAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVVRAGVTSEGSPLVLMSCP------------------GGVGGGLQVFLLHKGLGTWVRVADGRYSLSNFYGSGPCTVHA-TGLVSGLQGIVRSSARPSPSALLQASALPAT---------HLSSSAMRGITGEGGLQVSVTRTHLEDSMACALMLGSSEEFVDILQAYAGCLAKTCVGANDARVRALCDKLL 1185 V EC+ P+ S+P V + R GK+ W + + G + S ++ + AVG DG + +Y S T+ P+LV+ P+ S+ + Q + L+ ++G+G V+ L + L KGS+ P M ++LG+SL S+ + + + R +T L+L+S GVGG LQ F+ + W++ AD R+ LS+FY + P + G +S L+ VR A LQAS PA H R G TR H ED MACA+ L S++EF L Y L CV + +R L D L+ Sbjct: 822 VAECTNSVKLPVGSRTTSIPC---VDVALSRDGKISWKDQIPGTSCSAIAASTTLMAVGTTDGCLQLYGTSPTIGWTCGQSFRSHPSLVLGHPIV-------------SLQLQETQGEDDEIFATLLTLTGDGTFAVYSVLPVLQLQFKGSVMPAMSHMALGTSLTSEQHS---------------------------------------------IKISRIQITETNRVLLLLSLQTVDNAQLRGGLRGTTQIDAGVGGSLQAFVFDQKAELWMKAADNRFVLSDFYSALPSAKFSPNGELSRLEDAVRIGA-------LQASMKPAQRGRLRDTDRHADEMFSRADLESGNFIP--TRAHCEDRMACAIALESADEFKKWLSLYIKVL---CVVGHTDFLRVLVDILM 1158
BLAST of mRNA_C-tenellus_contig1170.1.1 vs. uniprot
Match: A0A1Z5JDQ7_FISSO (Protein HIRA n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JDQ7_FISSO) HSP 1 Score: 68.9 bits (167), Expect = 2.580e-8 Identity = 114/462 (24.68%), Postives = 182/462 (39.39%), Query Frame = 1 Query: 88 VLEC---SPLPQEFRSLPARRYTRVTMFRGGKVVWSNFLAGIATSCCG---NSRVGAVGVEDGSIYIYDRS---GTLVAPALVISPPVAYLECSGDVQDPTTSISSKYPQNRRGVVGDQLMAISGEGEVFVWDL-DAMSLTVKGSLGPLMRSLSLGSSLASQSPTSTTAGKGRDQGETAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVVRAGVTSEGSPLVLMSCPG------GVGGGLQVFLLHKGLGTWVRVADGRYSLSNFYGSGPCTVHATGLVSGLQGIVRSSARPSPSALLQASALPATHLSSSAMRGITGEGGLQVSVTRTHLEDSMACALMLGSSEEFVDILQAYAGCLAKTCVGANDARVRALCDKLLVGCRPE------GDQSVLAVTVGGSEGGANGGALELGARFGSGPTVLGVSKFKLLKEVVLPALGANRSLQRLVHEYSNEL 1407 ++EC S +P + P V + + WS+ + G TSC ++R A+G DGSI +Y S G L A A PP L CSG V +S + + + Q++ ++ +G + + +SL KGS+ P M ++L +A +D + R +T L+L+S GVGG +Q F+ + W+R+AD R+ LS+FY S P A G ++ + V+ A S L A+H ++SA+ E TR H ED +ACA+ S E+ + + G L + D L ++++G P D S +++ P VL + +L++ VVLP + NRSLQRL +E S E+ Sbjct: 709 IVECTNSSKIPSGAKGNPVPCID-VVIKKDNTATWSDQIVG--TSCAAVSASNRFLAIGTADGSIQLYGTSPSIGWLSANAFRSHPP---LICSGAV------VSLRLEETEASL---QMLVVTSDGSFGLHTVFPRLSLVKKGSILPPMTHMAL------------SAASNKD---------------------------------LVYPQLSRIQITKNNQLLLLLSFSNTNRESCGVGGSVQSFVYNDMSELWMRLADSRFVLSDFYSSLPSRSPA-GRLTEIDDSVKLGALEST--------LKASHRNASAIYLQGSEKSGNFLATRAHCEDRLACAVAFESGPEY----RLWLGRLVRILSITGDETGLRLLTEMILGRGPSLTNGVGNDDSCWWLSL--------------------SPEVLKQDRKELIQSVVLPEMSKNRSLQRLTNELSLEI 1077
BLAST of mRNA_C-tenellus_contig1170.1.1 vs. uniprot
Match: A0A1Y1I787_KLENI (Protein HIRA n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I787_KLENI) HSP 1 Score: 62.8 bits (151), Expect = 1.990e-6 Identity = 69/240 (28.75%), Postives = 107/240 (44.58%), Query Frame = 1 Query: 691 SVVRAGVTSEGSPLVLMSCPGGVGGGLQVFLLHKGLGTWVRVADGRYSLSNFYG--SGPCTVHATGLVSGLQGIVRSSARPSP---SALLQASALPATHLSSSAMRGITGEGGLQVSVTRTHLEDSMACALMLGSSEEFVDILQAYAGCLAKTCVGANDARVRALCDKLLVGCRPEGDQSVLAVTVGGSEGGANGGALELGARFGSGPTVLGVSKFKLLKEVVLPALGANRSLQRLVHEY 1395 ++V + G+PL+++S + + H G+ W+R+AD + S F + H ++ LQ V + R + LL SA EG Q +R HLE +A A+ + S E+ L AYA L + A++ R+R LC Q LA T GSE G +VLG+SK +LL+ V+LPA+ ANR++QRL++E+ Sbjct: 766 TIVSLRFSKAGAPLIVLS-------NREAHMYHLGMRCWLRIADESFPASEFTSVRGADASGHEKEDLTVLQAEVAAQGRGRRGLFNPLLDISA---------------AEGQAQ---SRAHLESQLAAAVTMNSPTEYKRWLTAYARHLTRE---ADEGRLRELC------------QEFLAPTGSGSE----------------GASVLGMSKRELLQAVILPAMSANRAVQRLLNEF 949 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1170.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1170.1.1 >prot_C-tenellus_contig1170.1.1 ID=prot_C-tenellus_contig1170.1.1|Name=mRNA_C-tenellus_contig1170.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=560bp MAGLGLENERGGRIGKSGVLECSPLPQEFRSLPARRYTRVTMFRGGKVVWback to top mRNA from alignment at C-tenellus_contig1170:824..4569+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig1170.1.1 ID=mRNA_C-tenellus_contig1170.1.1|Name=mRNA_C-tenellus_contig1170.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3746bp|location=Sequence derived from alignment at C-tenellus_contig1170:824..4569+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig1170:824..4569+ >mRNA_C-tenellus_contig1170.1.1 ID=mRNA_C-tenellus_contig1170.1.1|Name=mRNA_C-tenellus_contig1170.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1680bp|location=Sequence derived from alignment at C-tenellus_contig1170:824..4569+ (Choristocarpus tenellus KU2346)back to top |