mRNA_C-tenellus_contig117.5.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig117.5.1 vs. uniprot
Match: D8LRX5_ECTSI (LigB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRX5_ECTSI) HSP 1 Score: 294 bits (753), Expect = 3.910e-93 Identity = 137/248 (55.24%), Postives = 173/248 (69.76%), Query Frame = 1 Query: 334 RYLNCNSEPAEWFRSLAKGWEKPSAIVVISAHWEERDQVLVTSSSKHPLLFDYYGFPDYTYEIEYPCPGDPTLAQSIIELLRAGGVEAGAEETRGYDHGVFVPLKLIYPDADIPVVQVSMRASLGVEQHMKIGMLLSDLQEKHSDILVIGSGQATHNLRTMDPSYPPGVGRKEEDGFVKWLKQTMIDEDLRPEDRKVLLRLWEEKAPHARLAHPREEHLLPLHVVAGYVGFSPGKTVYDRFFLGTMSL 1077 + ++ S A+W+R+ K W KPSAIVV+SAHWE R V VT+ KHPL FDYYGFPDY Y++EY PG P LA+ IIELL A G A +++RGYDHG F+PLKL+YPDAD+PVVQVS+ L E+H+K+G L L ++ D+L++GSGQATH + YPPG G +E+ FV WLK+T + PE+R+ LR WE APH R AHPREEHLLPLHV AG GF PG ++D F +G MSL Sbjct: 2 KQIDATSAAAQWYRTFTKKWAKPSAIVVVSAHWEGRGAVKVTTGEKHPLFFDYYGFPDYCYDLEYAPPGHPELARRIIELLEADGFNARGDDSRGYDHGTFIPLKLMYPDADVPVVQVSLLGGLDPEKHLKMGKTLKKLVDER-DVLIVGSGQATHGRGSDHRPYPPGKGAPKEEAFVDWLKETAASPAVTPEERQRRLREWERDAPHGRNAHPREEHLLPLHVAAGCTGFQPGSIIFDDFAMGHMSL 248
BLAST of mRNA_C-tenellus_contig117.5.1 vs. uniprot
Match: A0A836CEX8_9STRA (Catalytic LigB subunit of aromatic ring-opening dioxygenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEX8_9STRA) HSP 1 Score: 235 bits (599), Expect = 6.490e-70 Identity = 127/270 (47.04%), Postives = 165/270 (61.11%), Query Frame = 1 Query: 295 GPCFFMDDDKGTFRYLNCNSEPAEWFRSLAKGWEKPSAIVVISAHWE-ERDQVLVTSSSKHPLLFDYYGFPDYTYEIEYPCPGDPTLAQSIIELLRAGGVEAGAEETRGYDHGVFVPLKLIYPDADIPVVQVSMRASLGVEQHMKIGMLLSDLQEKHSDILVIGSGQATHNLRTMDPSYPPGVGRKEED---GFVKWLKQTMIDEDLRPEDRKVLLRLWEEKAPHARLAHPREEHLLPLHVVAGYVGFSPGKTVYDRFFLGTMSLLSFVF 1092 GPCFF + G F ++ NS A FR L+ KP IV+ +AHWE + ++ VT L++DYYGFP TY++ YP PGDP LA I+ LL+ G+ A E RG+DHGVF+PLK+IYPDAD+PVV +S+ ++L H+ +G LS L + +LV GSG ATHNL + + G G E F+ WLK T+ D E + LLR W E+APHAR +HPREEHLLPLHV AG GF+ G+ V D G MS+ SF F Sbjct: 22 GPCFFYEA-AGPFSAIDKNSRVAADFRKLSTVLPKPKVIVICTAHWEADGPKIRVTGQPAPSLVYDYYGFPAETYKLTYPAPGDPQLAADIVALLKGAGISAELELERGFDHGVFIPLKMIYPDADVPVVAISLSSTLDPAFHISVGKALSGLAGR--GVLVFGSGMATHNLGMVRSAAAHGEGVPVEPRAGAFIDWLKATLGDGVSAQERERRLLR-WTEEAPHARHSHPREEHLLPLHVAAGAAGFAAGELVLDATVFGGMSMASFAF 287
BLAST of mRNA_C-tenellus_contig117.5.1 vs. uniprot
Match: I7ZAX2_9GAMM (Catalytic LigB subunit of aromatic ring-opening dioxygenase n=1 Tax=Hydrocarboniphaga effusa AP103 TaxID=1172194 RepID=I7ZAX2_9GAMM) HSP 1 Score: 221 bits (562), Expect = 9.270e-65 Identity = 119/259 (45.95%), Postives = 163/259 (62.93%), Query Frame = 1 Query: 295 GPCFFMD-DDKGTFRYLNCNSEPAEWFRSLA-KGWEKPSAIVVISAHWEERDQVLVTSSSKHPLLFDYYGFPDYTYEIEYPCPGDPTLAQSIIELLRAGGVEAGAEETRGYDHGVFVPLKLIYPDADIPVVQVSMRASLGVEQHMKIGMLLSDLQEKHSDILVIGSGQATHNLRTMDPSYPPGVGRKEEDGFVKWLKQTMIDEDLRPEDRKVLLRLWEEKAPHARLAHPREEHLLPLHVVAGYVGFSPGKTVYDRFFLG 1065 GPCFFM+ + T+R L W R L+ + +KP A++V+SAHWE ++ VT+ + L++DYYGFP +TYE++YP PGDP LA+ I+ L G+ A + RG+DHGVFVPLKLIYP ADIPVVQ+S+RA L +H+ +G L+ L+E+ +L+IGSG + HN+R G G++ F +WL + + + PE RK LR WE +AP AR AHPREEHLLPL V AG G GK ++ G Sbjct: 17 GPCFFMEWNPPDTWRSLEA------WLRGLSVEVGDKPRALLVVSAHWEA-ERYSVTAHPQPSLIYDYYGFPQHTYELQYPAPGDPALAEEIVRRLGVAGLPAEIDRERGFDHGVFVPLKLIYPQADIPVVQLSLRAGLNPAEHLAVGAALAPLREQ--GVLIIGSGYSYHNMRGYG-----GAGQRPSIEFDRWLNEALTAD---PETRKERLRDWE-RAPSARAAHPREEHLLPLMVAAGAAGQDIGKRLFGELVFG 257
BLAST of mRNA_C-tenellus_contig117.5.1 vs. uniprot
Match: A0A2M7G2W7_9BACT (Dioxygenase n=1 Tax=bacterium (Candidatus Blackallbacteria) CG17_big_fil_post_rev_8_21_14_2_50_48_46 TaxID=2014261 RepID=A0A2M7G2W7_9BACT) HSP 1 Score: 214 bits (545), Expect = 2.920e-62 Identity = 115/258 (44.57%), Postives = 158/258 (61.24%), Query Frame = 1 Query: 295 GPCFFMDDDKGTFRYLNCNSEPAEWFRSLAKGWEKPSAIVVISAHWEERDQVLVTSSSKHPLLFDYYGFPDYTYEIEYPCPGDPTLAQSIIELLRAGGVEAGAEETRGYDHGVFVPLKLIYPDADIPVVQVSMRASLGVEQHMKIGMLLSDLQEKHSDILVIGSGQATHNLRTMDPSYPPGVGRKEEDGFVKWLKQTMIDEDLRPEDRKVLLRLWEEKAPHARLAHPREEHLLPLHVVAGYVGFSPGKTVYDRFFLGT 1068 GPCFFMD T+ + + A+W ++L P AIVV+SAHWE +VL+T ++ PLL+DYYGFP++TY++ YP PG P LA I L A + A + RGYDHGVF+PLKLIYP+A IPVVQ+S+ ASL +H++IG L+ L+E+ +L++GSG + HNLR + ++ F WL QT+ E+R + L W KAP R HPREEHLLPL VVAG + G+ V+ +G+ Sbjct: 14 GPCFFMD---WTWGPADSWDKLADWLKNLRHTLPVPQAIVVVSAHWENSAEVLITGHAQPPLLYDYYGFPEHTYQLSYPAPGAPDLAGKIQTHLAAQAIPARIDAERGYDHGVFIPLKLIYPEAQIPVVQISLLASLDPARHLEIGKALAPLREE--GVLLLGSGMSFHNLRVFGQNV-----MEQSQAFDAWLTQTL---QASAEERNLALADWA-KAPSGRFCHPREEHLLPLMVVAGAAESAKGEKVFTDAIMGS 257
BLAST of mRNA_C-tenellus_contig117.5.1 vs. uniprot
Match: A0A1B1YYA5_9GAMM (Dioxygenase n=3 Tax=Bacteria TaxID=2 RepID=A0A1B1YYA5_9GAMM) HSP 1 Score: 213 bits (543), Expect = 6.310e-62 Identity = 121/267 (45.32%), Postives = 161/267 (60.30%), Query Frame = 1 Query: 295 GPCFFMD-DDKGTFRYLNCNSEPAEWFRSLAKGW-EKPSAIVVISAHWEERDQVLVTSSSKHPLLFDYYGFPDYTYEIEYPCPGDPTLAQSIIELLRAGGVEAGAEETRGYDHGVFVPLKLIYPDADIPVVQVSMRASLGVEQHMKIGMLLSDLQEKHSDILVIGSGQATHNLRTMDPSYPPGVGRKEEDGFVKWLKQTMIDEDLRPEDRKVLLRLWEEKAPHARLAHPREEHLLPLHVVAGYVGFSPGKTVY-DRFFLGTMSLLSF 1086 GPCFFMD + T+ + A W R + G ++P A+++IS HWEE V V ++ PLLFDYYGFP +TY++ YP PGDP LA + ELL+AGGV AE RG DHGVFVP LIYP AD+P+VQ+S+ A+L H+ +G LL L+++ +L++GSG + HN+R + P ++ F WL E P R LL WE +AP AR +HPREEHLLPL V AG G PG+ V+ DR T+S +F Sbjct: 16 GPCFFMDWNPPDTWERM------AAWLRGIDAGLGQRPRAVLLISGHWEE-PVVSVNIQARPPLLFDYYGFPPHTYQLNYPAPGDPALAARVRELLQAGGVPTRAETERGLDHGVFVPFLLIYPQADVPIVQLSLHANLDAAAHLALGALLEPLRDE--GVLIVGSGMSYHNMRGLMGGADPA---RDSLAFDSWLGDACTAE---PAARSRLLADWE-RAPAARSSHPREEHLLPLMVAAGAGGDDPGRRVFQDRVLGATVSAFAF 266
BLAST of mRNA_C-tenellus_contig117.5.1 vs. uniprot
Match: A0A1Y0BMB9_9BACT (J571 n=1 Tax=uncultured bacterium TaxID=77133 RepID=A0A1Y0BMB9_9BACT) HSP 1 Score: 213 bits (541), Expect = 1.170e-61 Identity = 121/267 (45.32%), Postives = 161/267 (60.30%), Query Frame = 1 Query: 295 GPCFFMD-DDKGTFRYLNCNSEPAEWFRSLAKGWE-KPSAIVVISAHWEERDQVLVTSSSKHPLLFDYYGFPDYTYEIEYPCPGDPTLAQSIIELLRAGGVEAGAEETRGYDHGVFVPLKLIYPDADIPVVQVSMRASLGVEQHMKIGMLLSDLQEKHSDILVIGSGQATHNLRTMDPSYPPGVGRKEEDGFVKWLKQTMIDEDLRPEDRKVLLRLWEEKAPHARLAHPREEHLLPLHVVAGYVGFSPGKTVY-DRFFLGTMSLLSF 1086 GPCFFMD + T+ + A W R + G + +P A+++IS HWEE V V ++ PLLFDYYGFP +TY +EYP PGDP LA + ELL+AGGV + E RG DHGVFVP L+YP AD+P+VQ+S+ SL H+ IG LL L+++ +L++GSG + HN+R + PG ++ F WL + E P R LL WE +AP AR +HPREEHLLPL V AG G G+ V+ DR T+S +F Sbjct: 14 GPCFFMDWNPPDTWDRM------AAWLRGIDAGLDQRPKAVLLISGHWEE-PVVSVNVQARPPLLFDYYGFPPHTYRLEYPAPGDPALAARVRELLQAGGVPSRTEAERGLDHGVFVPFLLVYPHADVPIVQLSLHESLDAGTHLAIGALLEPLRDQ--GVLIVGSGMSYHNMRGLMGGGDPG---RDSLAFDTWLGEACTAE---PATRSRLLADWE-RAPAARASHPREEHLLPLMVAAGAAGADIGRRVFHDRVLGATVSAFAF 264
BLAST of mRNA_C-tenellus_contig117.5.1 vs. uniprot
Match: A0A1M5QQY5_9GAMM (Aromatic ring-opening dioxygenase, catalytic subunit, LigB family n=1 Tax=Hydrocarboniphaga daqingensis TaxID=490188 RepID=A0A1M5QQY5_9GAMM) HSP 1 Score: 212 bits (540), Expect = 1.690e-61 Identity = 119/258 (46.12%), Postives = 161/258 (62.40%), Query Frame = 1 Query: 295 GPCFFMD-DDKGTFRYLNCNSEPAEWFRSLAKGWE---KPSAIVVISAHWEERDQVLVTSSSKHPLLFDYYGFPDYTYEIEYPCPGDPTLAQSIIELLRAGGVEAGAEETRGYDHGVFVPLKLIYPDADIPVVQVSMRASLGVEQHMKIGMLLSDLQEKHSDILVIGSGQATHNLRTMDPSYPPGVGRKEEDGFVKWLKQTMIDEDLRPEDRKVLLRLWEEKAPHARLAHPREEHLLPLHVVAGYVGFSPGKTVY-DR 1053 GPCFFMD + T+ L W R + G E +P+AI+V+SAHWE D VT +++ L++DY+GFP +TY+++YP PG PTLAQ I+E LRA G+ + ++ RG+DHGVFVPL L++PDADIPVVQ+S+R L +H+ G L+ L+++ +L++GSG + HN+R G G + F WL+ T+ P R LR WE+ AP AR AHPREEHLLPL V AG G S G VY DR Sbjct: 17 GPCFFMDWNPPDTWTSLG------NWLRGI--GGEISARPTAIIVVSAHWEA-DDFSVTGAAQPSLIYDYHGFPPHTYQLQYPAPGAPTLAQQIVERLRAAGLPSQRDDARGWDHGVFVPLMLMFPDADIPVVQLSLRRGLDAAEHLAAGAALAGLRDE--GVLIVGSGYSYHNMRGYG-----GAGERAAAEFDGWLQTTITA--TAPAQRAAALRRWED-APSARAAHPREEHLLPLMVAAGAAGDSAGTCVYTDR 255
BLAST of mRNA_C-tenellus_contig117.5.1 vs. uniprot
Match: A0A522CMS9_9PROT (Dioxygenase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A522CMS9_9PROT) HSP 1 Score: 211 bits (538), Expect = 3.050e-61 Identity = 122/255 (47.84%), Postives = 155/255 (60.78%), Query Frame = 1 Query: 295 GPCFFMD-DDKGTFRYLNCNSEPAEWFRSLAKGW-EKPSAIVVISAHWEERDQVLVTSSSKHPLLFDYYGFPDYTYEIEYPCPGDPTLAQSIIELLRAGGVEAGAEETRGYDHGVFVPLKLIYPDADIPVVQVSMRASLGVEQHMKIGMLLSDLQEKHSDILVIGSGQATHNLRTMDPSYPPGVGRKEEDGFVKWLKQTMIDEDLRPEDRKVLLRLWEEKAPHARLAHPREEHLLPLHVVAGYVGFSPG-KTVYD 1050 GPCFFMD D T++ + +W +SL EKP AI+VISAHWEE D V S+ PL++DYYGFP TYE++YP PG P LA+ + LL G+ A + RGYDHGVFVPLKLIYPDA+IPVVQ+S+R +L QH+ G L+ L+++ +L++GSG + HNL G +K F WL Q P+ R +L W E AP AR AHPREEHLLPL VVAG G G +T+ D Sbjct: 14 GPCFFMDWDPPDTWKKMG------DWLKSLPSSMPEKPKAILVISAHWEE-DAFTVMSNPAPPLIYDYYGFPPETYELKYPAPGAPDLAKKVAGLLENAGLPARLNDARGYDHGVFVPLKLIYPDAEIPVVQLSLRRNLDPAQHLAAGRALASLRDE--GVLIVGSGMSYHNLEKFFRGDRQGDSQK----FDAWLTQAATSA---PQQRDDMLVHWAE-APSARQAHPREEHLLPLMVVAGAAGGDAGHQTLSD 251
BLAST of mRNA_C-tenellus_contig117.5.1 vs. uniprot
Match: A0A2T6E2T7_9GAMM (Dioxygenase n=1 Tax=Saccharospirillum sp. MSK14-1 TaxID=1897632 RepID=A0A2T6E2T7_9GAMM) HSP 1 Score: 210 bits (534), Expect = 1.300e-60 Identity = 111/263 (42.21%), Postives = 154/263 (58.56%), Query Frame = 1 Query: 295 GPCFFMDDDKGTFRYLNCNSEPA--EWFRSLAKGWEKPSAIVVISAHWEERDQVLVTSSSKHPLLFDYYGFPDYTYEIEYPCPGDPTLAQSIIELLRAGGVEAGAEETRGYDHGVFVPLKLIYPDADIPVVQVSMRASLGVEQHMKIGMLLSDLQEKHSDILVIGSGQATHNLRTMDPSYPPGVGRKEEDGFVKWLKQTMIDEDLRPEDRKVLLRLWEEKAPHARLAHPREEHLLPLHVVAGYVGFSPGKTVYDRFFLGTMSL 1077 P FF+ G +N S A + + ++ WEKP A++VISAHWE DQ V + L FDYYGFP TY EYP Q+I L G+ G E RGYDHGVFVP+KLIYP+AD+PV+QVS+ L + H+++G L+ L+E+ +++IGSG + HN+R + + G + + F +WL + + D DL P+ R+ L W E APHAR HPREEHLLPLHV G +P + V+D+ LG ++ Sbjct: 5 APVFFLPHGGGPLPLMNDPSHQAIIDLLKQVSTRWEKPKAVLVISAHWEA-DQPTVLADVDPGLYFDYYGFPAETYTYEYPTQNPQPWQQAIAAALDDAGLSFGRETGRGYDHGVFVPMKLIYPEADLPVMQVSLVKGLDPQAHLELGRALASLREQ--GVMIIGSGFSFHNMRAYN--FQGGEASPQSEAFHQWLVEQLTDADLSPQQRQDALAAWTE-APHARFCHPREEHLLPLHVCVGAANGAPAEIVFDQAMLGQRAI 261
BLAST of mRNA_C-tenellus_contig117.5.1 vs. uniprot
Match: UPI001EF204CD (dioxygenase n=1 Tax=Candidatus Nitrotoga sp. M5 TaxID=2890409 RepID=UPI001EF204CD) HSP 1 Score: 209 bits (533), Expect = 1.940e-60 Identity = 106/226 (46.90%), Postives = 148/226 (65.49%), Query Frame = 1 Query: 349 NSEPAEWFRSLAKGWEKPSAIVVISAHWEERDQVLVTSSSKHPLLFDYYGFPDYTYEIEYPCPGDPTLAQSIIELLRAGGVEAGAEETRGYDHGVFVPLKLIYPDADIPVVQVSMRASLGVEQHMKIGMLLSDLQEKHSDILVIGSGQATHNLRTMDPSYPPGVG--RKEEDGFVKWLKQTMIDEDLRPEDRKVLLRLWEEKAPHARLAHPREEHLLPLHVVAGYV 1020 + E + ++++ EKPSAI+V+SAHWEE +TS S PL++DYYGFPD +Y+I YPCPG P LA+ I +L G+++ +ETRG+DHG+FVPLKL+YP+ADIP VQ+S+ +L E+H+K+G +L L + S +LVIGSG + HNL+ + P + + + F WL +T +L +R L WE AP AR HPREEHLLPLHV GY+ Sbjct: 25 HDEMVQCLKNISATIEKPSAIIVVSAHWEESCST-ITSGSNPPLIYDYYGFPDESYQITYPCPGQPLLARKIAKLFSEAGIQSSLDETRGFDHGLFVPLKLMYPEADIPCVQISLLKNLQPEEHVKVGQVLQKLND--SSLLVIGSGFSFHNLQAF---FAPNTADTKVQNESFEAWLLETCGSLELGERERMNRLINWE-AAPFARYCHPREEHLLPLHVCYGYI 243 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig117.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig117.5.1 >prot_C-tenellus_contig117.5.1 ID=prot_C-tenellus_contig117.5.1|Name=mRNA_C-tenellus_contig117.5.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=281bp MDDDKGTFRYLNCNSEPAEWFRSLAKGWEKPSAIVVISAHWEERDQVLVTback to top mRNA from alignment at C-tenellus_contig117:7535..10340+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig117.5.1 ID=mRNA_C-tenellus_contig117.5.1|Name=mRNA_C-tenellus_contig117.5.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2806bp|location=Sequence derived from alignment at C-tenellus_contig117:7535..10340+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig117:7535..10340+ >mRNA_C-tenellus_contig117.5.1 ID=mRNA_C-tenellus_contig117.5.1|Name=mRNA_C-tenellus_contig117.5.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=843bp|location=Sequence derived from alignment at C-tenellus_contig117:7535..10340+ (Choristocarpus tenellus KU2346)back to top |