mRNA_C-tenellus_contig117.11.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig117.11.2 vs. uniprot
Match: D8LNZ8_ECTSI (60S ribosomal export protein NMD3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNZ8_ECTSI) HSP 1 Score: 740 bits (1910), Expect = 2.420e-257 Identity = 392/557 (70.38%), Postives = 443/557 (79.53%), Query Frame = 2 Query: 248 PQQMMPTMLCCMCSTPIAPNPTSMCVQCIRTQVDITEGVATNLTIHECRGCKRYLRPPWVEAKLESRELMALCLRKVIGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQVMGVTFVVRNQQCTDCAAAFTDSTWKAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFRDGMDFYFSERNHAARFTDFLEGVVPCRTKHSKKLVSADNHSNVFNFHYTNLVTLVPVCKDDLVLLPRRLADSLGNIPRLVIAQRISSAVNFVDPLTAQTAEVTEEKYWRSEFPSLLSSTRLTVYVVLGTEPLPDNPRPGMPAR-RRIRKARLAEVELARDDDLGKNDIRFTAVTHLGHLLRAGDSVMGYDMSAVNLPSGE--GDSLLSSMPDVILVRKVYPRNTTSGDNNSGDGVGTGGGEKRQWKLRELEKDESGMGGGGAFAG-REEAMVEQDYERFLQQLEGDKEMRRQVNIYKAGPVAVRGRRGTTSVGTGEGGEXXXXXXXXXXMVDGDEADEEEIRLEELLDELTLDDAETGPD-EVVMGSAPTLNIEA 1903 P++ MPT+LCCMCS PI PNPTSMCV CIRTQVDITEG+ATNLT+H+CRGC+RYLRP WVE KLESRELMA+CLRK+ GLKKVKLVDA+WIWTEPHSRRLK+KLTVQKEVGNGAVLQQ M VTFVVRNQQC CAAAFTD+TW AVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTF+DGMDFYF+E++H+ARF DFLEGVVP + KHSKKLVSADNHSN+FNFHYT LVTLVPVCKDDLVLLP+RLA+SLGNI RL +AQRI+SAV FVDPLTAQTA+VTEEKYWR EFPSLLSSTRL YVVLGTEPLP+ RP P R RIRKAR+AEVELAR+ DLG+ND R TAV+HLGH+LRAGD+V+ YD+S+ NLP GE GD L +PDV+LVRKVYPR+ G GG R WKL ELEKD + R+EA E+DYERFLQQLE DK+MRRQVN+YK G A + G+G M D +E DEEE+RL+ELLD +TLD+A GPD E +G+A EA Sbjct: 19 PEKQMPTILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKLTVQKEVGNGAVLQQAMVVTFVVRNQQCDTCAAAFTDNTWTAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFKDGMDFYFTEKSHSARFVDFLEGVVPTKVKHSKKLVSADNHSNIFNFHYTYLVTLVPVCKDDLVLLPKRLAESLGNISRLAVAQRITSAVQFVDPLTAQTADVTEEKYWRYEFPSLLSSTRLVPYVVLGTEPLPEKARPSAPRRGHRIRKARVAEVELARECDLGRNDDRVTAVSHLGHILRAGDTVLAYDVSSANLPEGEATGD-LKGRLPDVVLVRKVYPRHDREG----------GGKADRHWKLGELEKDGGDXXXXXXVSEKRDEAAAEKDYERFLQQLESDKDMRRQVNLYKQGLAAK------PAAADGDGA-----------MEDVEEMDEEEVRLDELLDAMTLDNANAGPDGEEDLGAASASIFEA 547
BLAST of mRNA_C-tenellus_contig117.11.2 vs. uniprot
Match: A0A835ZB23_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB23_9STRA) HSP 1 Score: 618 bits (1593), Expect = 6.240e-210 Identity = 322/559 (57.60%), Postives = 396/559 (70.84%), Query Frame = 2 Query: 266 TMLCCMCSTPIAPNPTSMCVQCIRTQVDITEGVATNLTIHECRGCKRYLRPPWVEAKLESRELMALCLRKVIGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQVMGVTFVVRNQQCTDCAAAFTDSTWKAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFRDGMDFYFSERNHAARFTDFLEGVVPCRTKHSKKLVSADNHSNVFNFHYTNLVTLVPVCKDDLVLLPRRLADSLGNIPRLVIAQRISSAVNFVDPLTAQTAEVTEEKYWRSEFPSLLSSTRLTVYVVLGTEPLPDNPRPGMPARRRIRKARLAEVELARDDDLGKNDIRFTAVTHLGHLLRAGDSVMGYDMSAVNLPSGEGDSLLSSMPDVILVRKVYPRNTTSGDNNSGDGVGTGGGEKRQWKLRELEKDESGMGGGGAFAGREEAMVEQDYERFLQQLEGDKEMRRQVNIYKAGPVAVRGRRGTTSVGTGEGGEXXXXXXXXXXMVDGDEADEEEIRLEELLDELTLDDAETGPDE-----VVMGSAPTLNIEALELEAVQD 1927 T+ CC+CS PI PNPT MCVQCIRTQVDITEG+A TI +CRGC R+L+P WVEA LESRELMA+CLRKV GL +VKLVDA+W+WTE HSRRLKLKLTVQKEV NGA+LQQ + V F VRNQQCT+C A++T++TWKAVVQ+RQRVDHKRTFFYLEQLILKHNAH N+QT +DGMDF+++ERN AAR FLE V+PCR K+SKKL+SADNHSN +NFHYT LVT+ PVCKDDLVLLP RLA++LG RL + QRIS+ + VDP+TAQTA+V + Y R EF +LLSSTRL +VVLG EPLP P M RR+R+ARLAEV +AR+ DLG ND +FTA++HLGHLL+AGD+V+GYD+++ NLP L +++PDV+LVRKVY T G KR W+L LEKD + R+ + DYERF+QQLE DKEMRRQVN++K + + G + D +E DEE+IR+EELLD++ LDD + PD+ G AP +N AL L+ D Sbjct: 18 TVACCICSAPIKPNPTHMCVQCIRTQVDITEGIALKPTIFQCRGCMRWLKPNWVEATLESRELMAICLRKVSGLNRVKLVDASWVWTEAHSRRLKLKLTVQKEVQNGAILQQALIVEFTVRNQQCTECQASYTNNTWKAVVQIRQRVDHKRTFFYLEQLILKHNAHVNAINVQTHKDGMDFFYAERNQAARMLSFLESVIPCRIKNSKKLISADNHSNTYNFHYTYLVTVAPVCKDDLVLLPARLAETLGQFARLAVVQRISNGIALVDPVTAQTADVNVDHYARHEFVALLSSTRLVPFVVLGLEPLPLPSAPTMAQGRRMRRARLAEVTVARECDLGANDTQFTAISHLGHLLKAGDTVLGYDVASANLPEDHLRGLKTALPDVVLVRKVY----------------TSGAGKRAWRLEALEKDRE-----AELSKRDADAHDADYERFMQQLEADKEMRRQVNLFKDLAIGAAAKTGGSD--------------------DDNEVDEEQIRVEELLDDMRLDDPDAAPDDGDAQVFSAGEAPGVNFAALALDDEDD 535
BLAST of mRNA_C-tenellus_contig117.11.2 vs. uniprot
Match: A0A7S2WJE1_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJE1_9STRA) HSP 1 Score: 511 bits (1315), Expect = 8.700e-168 Identity = 274/537 (51.02%), Postives = 360/537 (67.04%), Query Frame = 2 Query: 266 TMLCCMCSTPIAPNPTSMCVQCIRTQVDITEGVATNLTIHECRGCKRYLRPPWVEAKLESRELMALCLRKVIGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQVMGVTFVVRNQQCTDCAAAFTDSTWKAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFRDGMDFYFSERNHAARFTDFLEGVVPCRTKHSKKLVSADNHSNVFNFHYTNLVTLVPVCKDDLVLLPRRLADSLGNIPRLVIAQRISSAVNFVDPLTAQTAEVTEEKYWR------SEFPSLLSSTRLTVYVVLGTEPLPDNPRPGMPARRRIRKARLAEVELARDDDLGKNDIRFTAVTHLGHLLRAGDSVMGYDMSAVNLPSGEGDSLLS--SMPDVILVRKVYPRNTTSGDNNSGDGVGTGGGEKRQWKLRELEKDESGMGGGGAFAGREEAMVEQD---YERFLQQLEGDKEMRRQVNIYK--AGPVAVRGRRGTTSVGTGEGGEXXXXXXXXXXMVDGDEADEEEIRLEELLDELTL 1837 T+LCC C PIA NP+ MC C+ + DITEG+AT L++H CRGC+R+LRP WV A+LES+ELMALCLRK+ GL KV LVDA WIWTEPHS RLK+K+T+QKEV GA+LQQ V FV+RNQQC DC +TD TWKAVVQVRQRVDHKRTF+YLEQL+LKHN HS+C +IQ+FRDGMDFYF+E+N A RFTDFL+G +P R K++KKL+S+DNHSN+FNF +T L ++P+CKDDL +LP RLA +L +I LV+ +R++ V+ VDPLT A + Y + S F ++S+ RL Y+VLG EP+ + R G ++ K RLA VE+AR DLG ND +F V+HLGH+LR GD+V+GYD+SA NL + + ++P+V+LVRK+Y GV + ++R W LR+LE D R++ +E D YERF+QQLEGDKEMR+ VN+Y+ AGP + EG E DE DEE++ ++ELL+ L + Sbjct: 18 TVLCCQCGNPIAANPSMMCAHCLSVRSDITEGIATQLSVHRCRGCERWLRPSWVTAELESKELMALCLRKIKGLSKVNLVDAQWIWTEPHSMRLKIKVTIQKEVDGGAILQQSFVVEFVIRNQQCEDCQKQYTDGTWKAVVQVRQRVDHKRTFYYLEQLLLKHNVHSRCISIQSFRDGMDFYFAEKNEAVRFTDFLQGNIPVRIKNTKKLISSDNHSNIFNFKFTFLCIIIPLCKDDLTVLPVRLAKTLSDISPLVLVERVTRLVHLVDPLTCDRATFDSDHYGKLTSGVESSFGGIMSAPRLIEYIVLGIEPILASERAGAASKVFKSKTRLAHVEVARASDLGVNDTKFHTVSHLGHILRTGDTVLGYDVSAANLDDADVARIEKRRALPEVVLVRKLY-------------GVES---QRRGWTLRKLEYDAVEE----PTRTRKKDDMESDSADYERFIQQLEGDKEMRKHVNLYRREAGPRKAAAAA-VDPLEEDEGEE--------------DEMDEEQVHIDELLEGLDI 519
BLAST of mRNA_C-tenellus_contig117.11.2 vs. uniprot
Match: W7TWI9_9STRA (60S ribosomal export protein NMD3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWI9_9STRA) HSP 1 Score: 511 bits (1317), Expect = 2.420e-167 Identity = 287/576 (49.83%), Postives = 377/576 (65.45%), Query Frame = 2 Query: 248 PQQMMPTMLCCMCSTPIAPNPTSMCVQCIRTQVDITEGVATNLTIHECRGCKRYLRPP----WVEAKLESRELMALCLRKVIGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQVMGVTFVVRNQQCTDCAAAFTDSTWKAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFRDGMDFYFSERNHAARFTDFLEGVVPCRTKHSKKLVSADNHSNVFNFHYTNLVTLVPVCKDDLVLLPRRLADSLGNIPRLVIAQRISSAVNFVDPLTAQTAEVTEEKYWRS--EFPSLLSSTRLTVYVVLGTEPLPDNPRPGMPARRRIRKARLAEVELARDDDLGKNDIRFTAVTHLGHLLRAGDSVMGYDMSAVNLPSGEGDSL----LSSMPDVILVRKVYPRNTTSGDNNSGDGVGTGGGEKRQWKLRELEKDESGMGGGGAFAGREEAMVEQDYERFLQQLEGDKEMRRQVNIYKAGPVAVRGRRGT------------------------TSVGTGEGG---EXXXXXXXXXXMVDGDEADEEEIRLEELLDELTLDDAETGPDE 1864 P Q +CCMC+ I PNPT+MC+QC+RTQV+I G++T +T+H+CRGC +Y+ W + ESRELMA+CLRKV GL +++LVDA WIWTEPHS+RLKLKLTVQ+EV NGAVLQ+ + V FVVRNQQC DC A++T WKA+VQVRQRVDHKRTF +LEQLILKHNAH+Q IQ F DGMDFYF+ERN AARFT+FLE P R K SKKLVS D+HSNVFN+ YT ++ +VPVCKDDLV+LP +LA +LG+I RL + R+ + ++ +DPLT QTAEV+ EKY ++ EF +LLS++RL ++VLG+EP + PARR ++ RLAEVE+A DLG ND R+ THLGH+LRAGD+V+GY ++ +L S + D L + +PD +LVRKVY +N G + W+L++ E DE + AG E ++D + QQLEGD+EMRR+VN+YKAG G T +++G G+G + D E DEE +RL+ELLD+L LDD + PD+ Sbjct: 10 PNQTPVAAICCMCAINIQPNPTNMCLQCLRTQVNIASGLSTRVTMHQCRGCLKYMGGSGGTGWSHYEAESRELMAVCLRKVAGLNRLRLVDAGWIWTEPHSKRLKLKLTVQQEVMNGAVLQEAVVVEFVVRNQQCPDCQASYTIGAWKAIVQVRQRVDHKRTFLHLEQLILKHNAHAQALQIQGFADGMDFYFAERNQAARFTEFLETACPVRVKQSKKLVSQDDHSNVFNYKYTTIIEIVPVCKDDLVILPTKLAQNLGDIARLCLVLRVLNHLHLIDPLTGQTAEVSVEKYHKAGFEFRALLSASRLVEFMVLGSEPALAPTKTSAPARR-SKRHRLAEVEVALMSDLGANDTRYRVFTHLGHILRAGDTVLGYLLATASLNSADADELETKTRAGLPDAVLVRKVY--------SNEGR-------IRPAWRLKKFEADEMEV----VEAGNAE-QEDRDLRDYRQQLEGDREMRRRVNMYKAGRPLPGGAEDTDHENAALGQKAGKTKGKVEKMTVVSAMGEGDGSTRLDERDRSTNEGLGEDVGEDDEEALRLDELLDDLELDDPDAPPDD 564
BLAST of mRNA_C-tenellus_contig117.11.2 vs. uniprot
Match: A0A7S2AZN0_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AZN0_9STRA) HSP 1 Score: 503 bits (1296), Expect = 1.120e-165 Identity = 273/517 (52.80%), Postives = 359/517 (69.44%), Query Frame = 2 Query: 317 MCVQCIRTQVDITEGVATNLTIHECRGCKRYLRPPWVEAKLESRELMALCLRKVIGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQVMGVTFVVRNQQCTDCAAAFTDSTWKAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFRDGMDFYFSERNHAARFTDFLEGVVPCRTKHSKKLVSADNHSNVFNFHYTNLVTLVPVCKDDLVLLPRRLADSLGNIPRLVIAQRISSAVNFVDPLTAQTAEVTEEKYWR-SEFPSLLSSTRLTVYVVLGTEPLP-DNPRPGMPARRRIRKARLAEVELARDDDLGKNDIRFTAVTHLGHLLRAGDSVMGYDMSAVNLPSGEGDSLLS-----SMPDVILVRKVYPRNTTSGDNNSGDGVGTGGGEKRQWKLRELE-KDESGMGGGGAFAGREEAMVEQDYERFLQQLEGDKEMRRQVNIYKAGPVAVRGRRGTTSVGTGEGGEXXXXXXXXXXMVDGDEADEEEIRLEELLDELTLDD 1843 MC QC+++ VDIT+G+ T L+++ CRGC+++L+P W+EA LES EL+ALCL+K+ GL KVKLVDA+W+WTEPHS RLK+KL +QKEV N AVLQQ V +V+RNQQC+DC +T WKAVVQVRQRVDHKRTF+YLEQL+LKH H+ C +IQTFRDGMDFYF+ERN A RFTDFL+ VVP R K++KKL+S+DNHSN+FN+ +T+L + P+CKDDLV+LP+ LA +LGNI LV+ +R+S+ ++ VDP T Q A E +++ F ++LS+ RL YVVLGTE L D P + RK RL EVELAR DLG ND R T V+HLGHLLRAGD+V+GYD+ L S + +++ ++PD LVRK+Y G + GDG T + R+WKL+EL ++E GG GA E + +DYE+F+QQLEGD+EMRRQVN++KA + T+V T D E DE+EIR+ ELL++L LDD Sbjct: 1 MCAQCLKSAVDITDGIPTQLSVYRCRGCQKWLKPGWIEADLESGELLALCLKKIRGLNKVKLVDASWVWTEPHSMRLKIKLNIQKEVMNAAVLQQAFVVEYVIRNQQCSDCQKQYTGGVWKAVVQVRQRVDHKRTFYYLEQLLLKHGVHTNCLSIQTFRDGMDFYFAERNQAVRFTDFLQTVVPIRMKNTKKLISSDNHSNLFNYKFTHLGVIAPLCKDDLVVLPKALALTLGNISPLVLIERVSTFIHLVDPFTCQRASFDIEHFYKVGAFGAVLSAARLVEYVVLGTEDLILDERESSTPTPTQKRKKRLVEVELARSADLGVNDTRLTCVSHLGHLLRAGDTVLGYDLERGALHSLDRETMAQVEKRRALPDSALVRKLY------GVGSGGDGETT---KSRRWKLKELAVQEEERNGGKGA-----EDVAMKDYEQFMQQLEGDREMRRQVNLFKA---TDDDQDMDTAVATD----------------DACEMDEQEIRIGELLEDLGLDD 484
BLAST of mRNA_C-tenellus_contig117.11.2 vs. uniprot
Match: T0RPV6_SAPDV (60S ribosomal export protein NMD3 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0RPV6_SAPDV) HSP 1 Score: 498 bits (1281), Expect = 2.160e-163 Identity = 253/482 (52.49%), Postives = 325/482 (67.43%), Query Frame = 2 Query: 236 MQTVPQQMMPTMLCCMCSTPIAPNPTSMCVQCIRTQVDITEGVATNLTIHECRGCKRYLRPPWVEAKLESRELMALCLRKVIGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQVMGVTFVVRNQQCTDCAAAFTDSTWKAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFRDGMDFYFSERNHAARFTDFLEGVVPCRTKHSKKLVSADNHSNVFNFHYTNLVTLVPVCKDDLVLLPRRLADSLGNIPRLVIAQRISSAVNFVDPLTAQTAEVTEEKYWRSEFPSLLSSTRLTVYVVLGTEPLPDNPRPGMPARRRIRKARLAEVELARDDDLGKNDIRFTAVTHLGHLLRAGDSVMGYDMSAVNLPSGEG---DSLLSSMPDVILVRKVYPRNTTSGDNNSGDGVGTGGGEKRQWKLRELEKDESGMGGGGAFAGREEAMVEQDYERFLQQLEGDKEMRRQVNIYK 1672 M VP+Q +P +LCCMC+ PI N +MCV C++ QVD+TEG+ + +H+CRGC ++ RPPWV A+LESREL+A+CL+K+ GL KVKLVDA W+WTEPHS+RLKLKLTVQKEV NGA+LQQ VTF+VRNQQC +C A+FT+++WKAVVQVRQ+VDHKRTFFYLEQLILKH H + ++I++ DG+DF+F ERNHA RF DFL VP + K +KKL+SADNHSN N+ +T V L VCKDDLV LP +LA LGNI L I +++S+++ +DP T Q AE+ +KYWR F +L SS +L Y VL + PL G+P R RK RLAE+E+ R+ D G ND RF THLG LL GD+ MGYD+S + D ++PDVILVRK + R R WKL+ +E ES + E+ E DY+ FL +LE DKEMR ++NIYK Sbjct: 1 MLHVPEQSLPNILCCMCAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKWSRPPWVAAELESRELLAICLKKISGLNKVKLVDAGWVWTEPHSKRLKLKLTVQKEVMNGAILQQSFVVTFIVRNQQCDECQASFTNNSWKAVVQVRQKVDHKRTFFYLEQLILKHRVHEKTSSIESHPDGVDFFFVERNHALRFVDFLSETVPIKLKTAKKLISADNHSNTANYKFTYAVDLATVCKDDLVALPLKLARQLGNISSLCIVTQVTSSIHVIDPFTMQRAEIDNDKYWRYPFKALRSSKQLVEYTVLDSNPLQIPTLGGVPVRTN-RKTRLAEMEIVRNSDFGVNDTRFQTTTHLGMLLNVGDTAMGYDLSTSVFNDSDTKPLDEAGITLPDVILVRKQFLRRVQK--------------RSRNWKLKNIEGIESAV----PVKKAEQTKTEMDYQHFLDELEDDKEMRSKINIYK 463
BLAST of mRNA_C-tenellus_contig117.11.2 vs. uniprot
Match: A0A024UHG0_9STRA (60S ribosomal export protein NMD3 n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A024UHG0_9STRA) HSP 1 Score: 493 bits (1270), Expect = 1.090e-161 Identity = 251/483 (51.97%), Postives = 329/483 (68.12%), Query Frame = 2 Query: 236 MQTVPQQMMPTMLCCMCSTPIAPNPTSMCVQCIRTQVDITEGVATNLTIHECRGCKRYLRPPWVEAKLESRELMALCLRKVIGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQVMGVTFVVRNQQCTDCAAAFTDSTWKAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFRDGMDFYFSERNHAARFTDFLEGVVPCRTKHSKKLVSADNHSNVFNFHYTNLVTLVPVCKDDLVLLPRRLADSLGNIPRLVIAQRISSAVNFVDPLTAQTAEVTEEKYWRSEFPSLLSSTRLTVYVVLGTEPLPDNPRPGMPARRRIRKARLAEVELARDDDLGKNDIRFTAVTHLGHLLRAGDSVMGYDMSAV---NLPSGEGDSLLSSMPDVILVRKVYPRNTTSGDNNSGDGVGTGGGEKRQWKLRELEKDESGMGGGGAFAGREEAMVEQDYERFLQQLEGDKEMRRQVNIYKA 1675 M VP+ +P +LCC+C+ PI N +MCV C++ QVD+TEG+ + +H+CRGC ++ RP WV A LESREL+A+CL+K+ GL KVKLVDA WIWTEPHS+RLKLKLTVQKEV NGA+LQQ VTF+VRNQQC DC A+FT+ +WKAVVQVRQ+V+HKRTFF+LEQLILKH H + T+I++ DG+DF+F ERNHA RF DFL+ VP K +KKL+SADNHSN N+ +T V + PVCKDDLV LP +LA LGNI L + +++S+++ +DP T Q AE+ +KYWR F +L SS +LT Y VL + PL + + G+P R RK RLA+V++ R+ D G ND+RF VTHLG LL GD+ MGYD+S +L + D S+PDV+LVRK + R R+WKL+ +E E M ++ + DYE FL LE DK+MR ++NIYKA Sbjct: 1 MMYVPEHELPDILCCICAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKWSRPQWVSADLESRELLAICLKKITGLNKVKLVDAGWIWTEPHSKRLKLKLTVQKEVMNGAILQQSFIVTFIVRNQQCDDCQASFTNHSWKAVVQVRQKVEHKRTFFFLEQLILKHRVHEKTTSIESQPDGVDFFFVERNHALRFVDFLQETVPISLKTAKKLISADNHSNTANYKFTYAVDIAPVCKDDLVALPLKLARQLGNISSLCLVTQVTSSIHVIDPFTMQRAEIDNDKYWRYPFKALRSSKQLTEYTVLDSSPLEISTKGGIPVRTN-RKTRLADVDIVRNSDFGVNDMRFHTVTHLGMLLNVGDTAMGYDLSTSVFNDLDTKPLDEAGISLPDVVLVRKQFLRRVQK--------------RSRKWKLKTIEGIEPTM----PLKKADQTKHDLDYEHFLNDLEEDKDMRSRINIYKA 464
BLAST of mRNA_C-tenellus_contig117.11.2 vs. uniprot
Match: A0A6G0XWA3_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWA3_9STRA) HSP 1 Score: 493 bits (1269), Expect = 1.340e-161 Identity = 262/542 (48.34%), Postives = 347/542 (64.02%), Query Frame = 2 Query: 245 VPQQMMPTMLCCMCSTPIAPNPTSMCVQCIRTQVDITEGVATNLTIHECRGCKRYLRPPWVEAKLESRELMALCLRKVIGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQVMGVTFVVRNQQCTDCAAAFTDSTWKAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFRDGMDFYFSERNHAARFTDFLEGVVPCRTKHSKKLVSADNHSNVFNFHYTNLVTLVPVCKDDLVLLPRRLADSLGNIPRLVIAQRISSAVNFVDPLTAQTAEVTEEKYWRSEFPSLLSSTRLTVYVVLGTEPLPDNPRPGMPARRRIRKARLAEVELARDDDLGKNDIRFTAVTHLGHLLRAGDSVMGYDMSAVNLPSGEG---DSLLSSMPDVILVRKVYPRNTTSGDNNSGDGVGTGGGEKRQWKLRELEKDESGMGGGGAFAGREEAMVEQD--YERFLQQLEGDKEMRRQVNIYKAGPVAVRGRRGTTSVGTGEGGEXXXXXXXXXXMVDGDEADEEEIRLEELLDELTLDDAETG 1855 V + +P +LCC+C+ PI N +MCV C++ QVD+TEG+ + +H+CRGC ++ RP WV A+LESREL+A+CL+K+ GL KVKLVDA WIWTEPHS+RLKLKLTVQKEV NGA+LQQ VTF+VRNQQC +C A+FT+ +WKAVVQVRQ+V+HKRTFFYLEQLILKH H + TNI++ DG+DF+F ERNHA RF DFL+ VP K +KKL+SADNHSN N+ +T V + PVCKDDLV LP +LA LGNI L + +++S+++ +DP T Q AE+ EKYWR F +L SS +LT Y VL + P+ + G+P R RK RLAE+E+ R+ D G ND RF V+HLG LL GD+ MGYD+ + D ++PDV+LVRK + R +R+WKL+ +E ES G+++ + D YE FL LE DKEMR ++NIYK S+ G+GG+ I L+ELLD++T++D E G Sbjct: 3 VAEHSLPDILCCICAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKWSRPQWVSAELESRELLAICLKKITGLNKVKLVDAGWIWTEPHSKRLKLKLTVQKEVMNGAILQQSFIVTFIVRNQQCDECQASFTNHSWKAVVQVRQKVEHKRTFFYLEQLILKHRVHEKTTNIESQPDGVDFFFVERNHALRFVDFLQETVPISLKTAKKLISADNHSNTANYKFTYAVDIAPVCKDDLVALPLKLARQLGNISSLCLVTQVTSSIHVIDPFTMQRAEIENEKYWRYPFKALRSSKQLTEYTVLDSTPMEIPMKGGVPVRTN-RKTRLAELEIVRNSDFGVNDTRFQTVSHLGMLLNVGDTAMGYDLVTSVFNDADTKPLDEAGITLPDVVLVRKQFLRRVQK--------------RQRKWKLKTIEGIES--------MGKKDDPTKHDLDYEHFLNDLEQDKEMRSRINIYKNDEXXXXXXXXXASMEDGDGGD---------------------IPLDELLDDMTMEDQENG 500
BLAST of mRNA_C-tenellus_contig117.11.2 vs. uniprot
Match: W2I7I2_PHYPR (60S ribosomal export protein NMD3 n=9 Tax=Peronosporaceae TaxID=4777 RepID=W2I7I2_PHYPR) HSP 1 Score: 492 bits (1266), Expect = 4.020e-161 Identity = 253/482 (52.49%), Postives = 331/482 (68.67%), Query Frame = 2 Query: 236 MQTVPQQMMPTMLCCMCSTPIAPNPTSMCVQCIRTQVDITEGVATNLTIHECRGCKRYLRPPWVEAKLESRELMALCLRKVIGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQVMGVTFVVRNQQCTDCAAAFTDSTWKAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFRDGMDFYFSERNHAARFTDFLEGVVPCRTKHSKKLVSADNHSNVFNFHYTNLVTLVPVCKDDLVLLPRRLADSLGNIPRLVIAQRISSAVNFVDPLTAQTAEVTEEKYWRSEFPSLLSSTRLTVYVVLGTEPLPDNPRPGMPARRRIRKARLAEVELARDDDLGKNDIRFTAVTHLGHLLRAGDSVMGYDMSAVNLPSGEGDSLLSS---MPDVILVRKVYPRNTTSGDNNSGDGVGTGGGEKRQWKLRELEKDESGMGGGGAFAGREEAMVEQDYERFLQQLEGDKEMRRQVNIYK 1672 M T+ QM PT+LCCMC+TPI N + CV C+++QVD+TEG+ + IH+CRGC R+ RPPWV A+LESREL+A+CL+K+ L +VKL+DA WIWTEPHSRRLKLKLTVQKEV + ++QQ VTFVVRNQQC C A+F + +W+AVVQVRQRVDHKRTFF+LEQLILKH AH + TNI++ DG+DF+FSERNHA RF DFL+ VP + K +KKL+SADNHSN N+ +T V + PVCKDDLVLLP +LA LGN+ L + Q ++S+++ VDP T Q AE+ EKYWR F +L S +T + VL + P+ P G A R RK RLA++E+ RD D G ND RF V+HLG LL GDS GYD+++ + L+ S +PDV+LV+K++PR R WKL+++E G+ G + + EQDYE+FL +LE DKE+R Q+N+YK Sbjct: 1 MSTMTSQM-PTILCCMCATPIVANAANTCVSCLKSQVDVTEGIPKEVIIHQCRGCMRWSRPPWVAAELESRELLAMCLKKINNLNRVKLIDANWIWTEPHSRRLKLKLTVQKEVMSKMIMQQSFVVTFVVRNQQCDACQASFANQSWRAVVQVRQRVDHKRTFFFLEQLILKHRAHEKTTNIESHPDGVDFFFSERNHALRFVDFLQESVPMKVKTAKKLISADNHSNTHNYKFTYAVEIAPVCKDDLVLLPVKLARMLGNMSCLCLVQSVTSSIHVVDPFTTQVAEIDSEKYWRYPFRALRSIKAMTDFTVLDSNPMAI-PSGGGRAIRVTRKTRLADMEVVRDADFGVNDTRFRTVSHLGMLLHVGDSARGYDLTSAVFNDADLVPLVQSGMTLPDVVLVKKMFPRRIQK--------------RARNWKLKKME----GVEQAGPVRKTDLSKEEQDYEQFLDELEEDKELRSQINLYK 462
BLAST of mRNA_C-tenellus_contig117.11.2 vs. uniprot
Match: D0MSQ0_PHYIT (60S ribosomal export protein NMD3 n=18 Tax=Peronosporaceae TaxID=4777 RepID=D0MSQ0_PHYIT) HSP 1 Score: 491 bits (1263), Expect = 1.210e-160 Identity = 254/482 (52.70%), Postives = 330/482 (68.46%), Query Frame = 2 Query: 236 MQTVPQQMMPTMLCCMCSTPIAPNPTSMCVQCIRTQVDITEGVATNLTIHECRGCKRYLRPPWVEAKLESRELMALCLRKVIGLKKVKLVDAAWIWTEPHSRRLKLKLTVQKEVGNGAVLQQVMGVTFVVRNQQCTDCAAAFTDSTWKAVVQVRQRVDHKRTFFYLEQLILKHNAHSQCTNIQTFRDGMDFYFSERNHAARFTDFLEGVVPCRTKHSKKLVSADNHSNVFNFHYTNLVTLVPVCKDDLVLLPRRLADSLGNIPRLVIAQRISSAVNFVDPLTAQTAEVTEEKYWRSEFPSLLSSTRLTVYVVLGTEPLPDNPRPGMPARRRIRKARLAEVELARDDDLGKNDIRFTAVTHLGHLLRAGDSVMGYDMSAVNLPSGEGDSLLSS---MPDVILVRKVYPRNTTSGDNNSGDGVGTGGGEKRQWKLRELEKDESGMGGGGAFAGREEAMVEQDYERFLQQLEGDKEMRRQVNIYK 1672 M T+ QM PT+LCCMC+TPI N + CV C+++QVD+TEG+ + IH+CRGC R+ RPPWV A+LESREL+A+CL+K+ L +VKL+DA WIWTEPHSRRLKLKLTVQKEV + ++QQ VTFVVRNQQC C A+F + +W+AVVQVRQRVDHKRTFF+LEQLILKH AH + TNI++ DG+DF+FSERNHA RF DFL+ VP + K +KKL+SADNHSN N+ +T V + PVCKDDLVLLP +LA LGN+ L + Q ++S+++ VDP T Q AEV EKYWR F +L S +T VL + P+ P G A R RK RLA++E+ RD D G ND RF V+HLG LL GDS GYD+++ + L+ S +PDV+LV+K++PR R WKL+++E G+ G + + EQDYE+F+ +LE DKEMR Q+N+YK Sbjct: 1 MSTMTSQM-PTILCCMCATPIVANAANTCVSCLKSQVDVTEGIPKEVIIHQCRGCMRWSRPPWVAAELESRELLAMCLKKINNLNRVKLIDANWIWTEPHSRRLKLKLTVQKEVLSKMIMQQSFVVTFVVRNQQCDACQASFANQSWRAVVQVRQRVDHKRTFFFLEQLILKHRAHEKTTNIESHPDGVDFFFSERNHALRFVDFLQESVPMKVKTAKKLISADNHSNTHNYKFTYAVEIAPVCKDDLVLLPVKLARMLGNMSCLCLVQSVTSSIHVVDPFTTQVAEVDSEKYWRYPFRALRSIKAMTDLTVLDSNPMAI-PSGGGRAIRVTRKTRLADMEVVRDADFGVNDTRFRTVSHLGMLLHVGDSARGYDLTSAVFNDADLVPLVQSGLTLPDVVLVKKMFPRRIQK--------------RARNWKLKKME----GVEQAGPVRKADLSKEEQDYEQFMDELEEDKEMRSQINLYK 462 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig117.11.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig117.11.2 >prot_C-tenellus_contig117.11.2 ID=prot_C-tenellus_contig117.11.2|Name=mRNA_C-tenellus_contig117.11.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=576bp MTMEVEDMQTVPQQMMPTMLCCMCSTPIAPNPTSMCVQCIRTQVDITEGVback to top mRNA from alignment at C-tenellus_contig117:15875..20180+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig117.11.2 ID=mRNA_C-tenellus_contig117.11.2|Name=mRNA_C-tenellus_contig117.11.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4306bp|location=Sequence derived from alignment at C-tenellus_contig117:15875..20180+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig117:15875..20180+ >mRNA_C-tenellus_contig117.11.2 ID=mRNA_C-tenellus_contig117.11.2|Name=mRNA_C-tenellus_contig117.11.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=1728bp|location=Sequence derived from alignment at C-tenellus_contig117:15875..20180+ (Choristocarpus tenellus KU2346)back to top |