mRNA_C-tenellus_contig11655.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig11655.1.1 vs. uniprot
Match: D8LFY3_ECTSI (EGF-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFY3_ECTSI) HSP 1 Score: 165 bits (417), Expect = 5.270e-47 Identity = 72/97 (74.23%), Postives = 81/97 (83.51%), Query Frame = 1 Query: 1 LLLSTAVVHTRGACPNYCSGHGTCGSGATCSCNSGWDFAPDCSLRTCSTGVAWADKAYAIDTAHSEVECSNAGLCNRANGLCECFSPFTGAACQRGE 291 +L ++A + ACPN+CSGHGTCG GA C+CNSGWDFAPDCSLRTCS GVAWADKAYA D AHSEVECSNAG+C+R G+C CFSPFTGAACQR Sbjct: 15 VLQASAALLANAACPNHCSGHGTCGPGAKCTCNSGWDFAPDCSLRTCSKGVAWADKAYATDIAHSEVECSNAGICDRDTGICSCFSPFTGAACQRAR 111
BLAST of mRNA_C-tenellus_contig11655.1.1 vs. uniprot
Match: F0YK13_AURAN (EGF-like domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YK13_AURAN) HSP 1 Score: 135 bits (341), Expect = 2.280e-38 Identity = 59/82 (71.95%), Postives = 65/82 (79.27%), Query Frame = 1 Query: 40 CPNYCSGHGTCGSGATCSCNSGWDFAPDCSLRTCSTGVAWADKAYAIDTAHSEVECSNAGLCNRANGLCECFSPFTGAACQR 285 CPN CSGHG CG+ CSC G+D+APDCSLRTCS G+AWADKAYA+D AHS ECSNAGLCNR G CECF +TG ACQR Sbjct: 13 CPNMCSGHGDCGAENVCSCFDGFDYAPDCSLRTCSKGIAWADKAYAVDLAHSMAECSNAGLCNRDTGKCECFDGYTGLACQR 94
BLAST of mRNA_C-tenellus_contig11655.1.1 vs. uniprot
Match: A0A835ZG45_9STRA (EGF-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG45_9STRA) HSP 1 Score: 129 bits (325), Expect = 2.280e-35 Identity = 58/96 (60.42%), Postives = 70/96 (72.92%), Query Frame = 1 Query: 1 LLLSTAVVHTRGA-CPNYCSGHGTCGSGATCSCNSGWDFAPDCSLRTCSTGVAWADKAYAIDTAHSEVECSNAGLCNRANGLCECFSPFTGAACQR 285 LL+ A+ T A CPN+CSGHGTCG TC+CN GW A DCSLR C G AWADKAYA D AH++VECS AG+C+ G C+CF+P+ G+ACQR Sbjct: 7 LLVLAALQQTATAVCPNFCSGHGTCGPENTCACNDGWTAAVDCSLRNCPLGAAWADKAYATDKAHADVECSGAGICDGETGECQCFTPYVGSACQR 102
BLAST of mRNA_C-tenellus_contig11655.1.1 vs. uniprot
Match: A0A7S3ZWQ5_9STRA (Hypothetical protein n=4 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZWQ5_9STRA) HSP 1 Score: 134 bits (336), Expect = 2.280e-34 Identity = 59/84 (70.24%), Postives = 65/84 (77.38%), Query Frame = 1 Query: 34 GACPNYCSGHGTCGSGATCSCNSGWDFAPDCSLRTCSTGVAWADKAYAIDTAHSEVECSNAGLCNRANGLCECFSPFTGAACQR 285 G CPN CSGHG+CG CSC G+D+APDCSLRTCS G AWADKAYA+D AHS ECS+AGLCNR G CECF +TG ACQR Sbjct: 19 GQCPNMCSGHGSCGPENVCSCFEGFDYAPDCSLRTCSKGAAWADKAYAVDLAHSPSECSSAGLCNRDTGKCECFDGYTGLACQR 102
BLAST of mRNA_C-tenellus_contig11655.1.1 vs. uniprot
Match: A0A7S0T0J1_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0T0J1_9STRA) HSP 1 Score: 125 bits (314), Expect = 2.420e-31 Identity = 57/96 (59.38%), Postives = 67/96 (69.79%), Query Frame = 1 Query: 1 LLLSTAVVHTRGACPNYCSGHGTCGSGATCSCNSGWDF-APDCSLRTCSTGVAWADKAYAIDTAHSEVECSNAGLCNRANGLCECFSPFTGAACQR 285 LLL+ + ACPN CSGHGTC G C C +GW+ A DCS R C+ G AWADKAYA D AH ECSNAG+C+R+ GLC+CF FTG+ACQR Sbjct: 19 LLLNINISIIESACPNSCSGHGTCAGGNICQCFTGWNGGAADCSFRQCANGTAWADKAYATDEAHQTTECSNAGICDRSTGLCKCFDGFTGSACQR 114
BLAST of mRNA_C-tenellus_contig11655.1.1 vs. uniprot
Match: A0A8K1CGE0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGE0_PYTOL) HSP 1 Score: 122 bits (305), Expect = 4.130e-30 Identity = 52/95 (54.74%), Postives = 66/95 (69.47%), Query Frame = 1 Query: 1 LLLSTAVVHTRGACPNYCSGHGTCGSGATCSCNSGWDFAPDCSLRTCSTGVAWADKAYAIDTAHSEVECSNAGLCNRANGLCECFSPFTGAACQR 285 LLL+ A CPN+CSGHGTCG+ C+C++ W APDCSLR C +GVAW+DKA + AH+ ECSN G+C+ G C CF+ +TGAACQR Sbjct: 4 LLLTMATRRVSATCPNFCSGHGTCGASNQCTCDTAWSAAPDCSLRKCPSGVAWSDKASTTNKAHATAECSNRGMCDYTKGECMCFNGYTGAACQR 98
BLAST of mRNA_C-tenellus_contig11655.1.1 vs. uniprot
Match: A0A7R9YF46_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YF46_9STRA) HSP 1 Score: 102 bits (255), Expect = 3.040e-24 Identity = 43/75 (57.33%), Postives = 56/75 (74.67%), Query Frame = 1 Query: 61 HGTCGSGATCSCNSGWDFAPDCSLRTCSTGVAWADKAYAIDTAHSEVECSNAGLCNRANGLCECFSPFTGAACQR 285 HG+CG+ C+C++ + APDCS R C + AW D+A A+DTAH+ +EC+NAGLCNR G+CECF FTG ACQR Sbjct: 1 HGSCGADNVCACDADFSAAPDCSKRQCPSAAAWFDRATAVDTAHALMECANAGLCNREQGVCECFDGFTGQACQR 75
BLAST of mRNA_C-tenellus_contig11655.1.1 vs. uniprot
Match: A0A7S1CQY3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CQY3_9STRA) HSP 1 Score: 102 bits (253), Expect = 4.240e-23 Identity = 52/90 (57.78%), Postives = 61/90 (67.78%), Query Frame = 1 Query: 31 RGACPNYCS-GHGTCGSGATCSCNSGWDFAPDCSLRTCSTGVAWADK-AYAIDTAHSEV-ECSNAGLCNRANGLCECFSPFTGAACQRGE 291 R CPN CS GTC + TC+C SG+ PDCS RTC TG AW DK A A D AH+ + ECSNAG+CNR G CECF PF+G AC+R + Sbjct: 80 RAQCPNLCSVTGGTCNADTTCTCFSGFT-GPDCSQRTCETGTAWVDKVATADDDAHNSILECSNAGICNRKTGECECFKPFSGIACERTD 168
BLAST of mRNA_C-tenellus_contig11655.1.1 vs. uniprot
Match: A0A482RKE2_9ARCH (EGF-like domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RKE2_9ARCH) HSP 1 Score: 96.3 bits (238), Expect = 6.830e-23 Identity = 47/90 (52.22%), Postives = 55/90 (61.11%), Query Frame = 1 Query: 40 CPNYCSGHGTCGSGATCSCNSGWDFAPDCSLRTCSTGVAWADKAYAIDTAH------SEVECSNAGLCNRANGLCECFSPFTGAACQRGE 291 C N CSGHG C G TC C GW APDCS R+C+TG AWA K +D H E ECS AG+C+ A G+C C + FTG AC+R E Sbjct: 53 CWNGCSGHGRCTPGVTCECFDGWRGAPDCSTRSCATGPAWAAK---LDVTHVALQSRPEAECSAAGVCDAATGICTCSAGFTGDACERSE 139
BLAST of mRNA_C-tenellus_contig11655.1.1 vs. uniprot
Match: A0A7S0SUI7_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SUI7_9STRA) HSP 1 Score: 100 bits (250), Expect = 1.070e-22 Identity = 48/82 (58.54%), Postives = 55/82 (67.07%), Query Frame = 1 Query: 40 CPNYCSGHGTCGSGATCSCNSGWDFAPDCSLRTCSTGVAWADKAYAIDTAHSEVECSNAGLCNRANGLCECFSPFTGAACQR 285 CPN C+ HG C TC+C G+ A DCSLRTC AWA K Y +D+AHS +ECS GLCNR NGLC CFS F G AC+R Sbjct: 30 CPNACNNHGACLRNHTCACVQGFTGA-DCSLRTCKYDKAWAAKPYDLDSAHSLLECSGNGLCNRRNGLCNCFSGFEGFACER 110 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11655.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig11655.1.1 >prot_C-tenellus_contig11655.1.1 ID=prot_C-tenellus_contig11655.1.1|Name=mRNA_C-tenellus_contig11655.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=100bp LLLSTAVVHTRGACPNYCSGHGTCGSGATCSCNSGWDFAPDCSLRTCSTGback to top mRNA from alignment at C-tenellus_contig11655:208..838- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig11655.1.1 ID=mRNA_C-tenellus_contig11655.1.1|Name=mRNA_C-tenellus_contig11655.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=631bp|location=Sequence derived from alignment at C-tenellus_contig11655:208..838- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig11655:208..838- >mRNA_C-tenellus_contig11655.1.1 ID=mRNA_C-tenellus_contig11655.1.1|Name=mRNA_C-tenellus_contig11655.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=300bp|location=Sequence derived from alignment at C-tenellus_contig11655:208..838- (Choristocarpus tenellus KU2346)back to top |