mRNA_C-tenellus_contig11651.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig11651.1.1 vs. uniprot
Match: D7FPJ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPJ5_ECTSI) HSP 1 Score: 260 bits (665), Expect = 4.830e-83 Identity = 124/190 (65.26%), Postives = 155/190 (81.58%), Query Frame = 1 Query: 1 RTRGYTKRGLEVDLNGQQHVPVLGQETRRSVQAQGPYETERLDAAAEQVLNRLKRVGPREFHAGYRVHKSPYEGGINTGSPFMDWWKNPYLVRGIPKNQAELSKPLKESSLGKYPAKPYYIAVGGNKSAVLPNGRFDVILEAEQTGGVIRNALGRSRRYGVPDTCDVDDQVYPGSTLAHPHLPVPPKKPP 570 RTRGYTKRGLEVDLNGQQ +P+ G E+RRSVQAQ PY+ + A E L+RLKRVGPREFHAG RV +PY+ GI+ G+ F+D W+NP+LVRG+P++QAE+ +PL E++LGK+P KP++++VGGNKS VLPNG FDVILEAEQTGGV+R GR+RR+G+PDTCDV+D V PGSTL P P PPK+ P Sbjct: 210 RTRGYTKRGLEVDLNGQQRIPLKGLESRRSVQAQDPYDLPKKAADLEDALSRLKRVGPREFHAGNRVALAPYQRGISGGTQFLDPWRNPFLVRGVPRDQAEMQRPLNETTLGKFPEKPFHVSVGGNKSTVLPNGIFDVILEAEQTGGVVRTQNGRTRRFGIPDTCDVNDDVVPGSTLFFP--PSPPKQRP 397
BLAST of mRNA_C-tenellus_contig11651.1.1 vs. uniprot
Match: A0A7S2G8K6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G8K6_9STRA) HSP 1 Score: 180 bits (456), Expect = 9.630e-52 Identity = 90/175 (51.43%), Postives = 122/175 (69.71%), Query Frame = 1 Query: 1 RTRGYTKRGLEVDLNGQQHVPVLGQETRRSVQAQGPYETERLDAAAEQVLNRLKRVGPREFHAGYRVHKSPYEGGINTGSPFMDWWKNPYLVRGIPKNQAELSKPLKESSLGKYPAKPYYIAVGGNKSAVLPNGRFDVILEAEQTGGVIRNALGRSRRYGVPDTCDV--DDQVYP 519 RTRGY KRGL D+NG + VPV ++R SVQA Y+ A E L+++ +G R+F AG VH++PY G+N GS + D W+NPY++RGIPK+QAELS+ +SLGK PA ++ +VGGNKSAVLPN RFDV+L+AE +GGV G + R+GV DTCDV +D+++P Sbjct: 223 RTRGYQKRGLVTDINGSRRVPVRPAQSRLSVQASSQYDVPLEAARMEAKLDKMSHIGGRDFTAGQAVHQAPYRRGLNDGSQYTDPWRNPYMIRGIPKSQAELSQG--RTSLGKAPAVHFHTSVGGNKSAVLPNDRFDVMLDAESSGGVHLRHKGTTNRFGVSDTCDVRDEDEMFP 395
BLAST of mRNA_C-tenellus_contig11651.1.1 vs. uniprot
Match: A0A835YV60_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV60_9STRA) HSP 1 Score: 176 bits (445), Expect = 1.160e-49 Identity = 89/169 (52.66%), Postives = 116/169 (68.64%), Query Frame = 1 Query: 1 RTRGYTKRGLEVDLNGQQHVPVLGQETRRSVQAQGPYETERLDAAAEQVLNRLKRVGPREFHAGYRVHKSPYEGGINTGSPFMDWWKNPYLVRGIPKNQAEL-SKPLKE-SSLGKYPAKPYYIAVGGNKSAVLPNGRFDVILEAEQTGGVIRNALGRSRRYGVPDTCDV 501 R RGY K LE D+ G +P RRS+QA PY+ AA E V +RLK +GPR F AG RV Y+ G++ G+ F++ W+NPYL RG+P++ +L S P KE SSLG+ PA+P++ AVGGN+SAVLPNGRFDVI EA+++GG GR+RR+GVPDTCDV Sbjct: 209 RKRGYQKLALEPDITGVMRMPQAAPGDRRSLQASQPYDLPSQLAAVEAVQHRLKLLGPRHFAAGERVRTPAYQRGVSEGTQFLEHWQNPYLSRGVPRSPEDLRSPPGKEGSSLGRAPARPFFTAVGGNRSAVLPNGRFDVIAEAQRSGGAAGRPFGRTRRFGVPDTCDV 377
BLAST of mRNA_C-tenellus_contig11651.1.1 vs. uniprot
Match: A0A7S2G0C8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G0C8_9STRA) HSP 1 Score: 151 bits (382), Expect = 1.840e-41 Identity = 84/182 (46.15%), Postives = 113/182 (62.09%), Query Frame = 1 Query: 4 TRGYTKRGLEVDLNGQQHVPVLGQETRRSVQAQGPYETERLDAAAEQVLNRLKRVG----PREFHAGYRVHKSPYEGGINTGSPFMDWWKNPYLVRGIPKNQAELSKPLKESSLGKYPAKPYYIAVGGNKSAVLPNGRFDVILEAEQTGGVIRNALGRSRRYGVPDTCDV--DDQVYPGSTL 531 TRGYTKRGL ++ G + VP+ ++RS+QA Y+ AE++ R ++G + F AG++V + G+N GS + D WKNPYL RG+P+ +A+L + S+LGK PA +Y AVGGNKSA LPNG FD IL+AE TGGV RS R+GVPDTCDV +D +P L Sbjct: 111 TRGYTKRGLTRNIGGGRVVPIKAPVSKRSLQATSHYDAV---TEAERLEKRRTKIGFMDKTKGFEAGHKVPLPAHRRGLNEGSAYQDPWKNPYLTRGVPEPKADLQ--MGRSTLGKAPAVHFYTAVGGNKSAALPNGTFDAILDAEHTGGVHLRHKHRSLRFGVPDTCDVHSEDPKFPPLVL 287
BLAST of mRNA_C-tenellus_contig11651.1.1 vs. uniprot
Match: A0A7S2W8X7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W8X7_9STRA) HSP 1 Score: 145 bits (367), Expect = 9.530e-39 Identity = 73/169 (43.20%), Postives = 109/169 (64.50%), Query Frame = 1 Query: 4 TRGYTKRGLEVDLNGQQHVPVLGQETRRSVQAQGPYETERLDAAAEQVLNRLKRVGPREFHAGYRVHKSPYEGGINTGSPFMDWWKNPYLVRGIPKNQAELSKPLKESSLGKYPAKPYYIAVGGNKSAVLPNGRFDVILEAEQTGGVIRNALGRSRRYGVPDTCDVDDQ 510 +R K L + ++G ++VP+ R S+QA PY+ ER ++ L +L VG ++F R ++ Y GIN G +MD W+NPYLVRG+P++QAELS+ +++GK PA +Y +VGGNKS VLPNG FDV+L+AE +GGV + + R+GVPD CD+ ++ Sbjct: 200 SRRRQKADLSMRMSGSRNVPLPQPTKRISLQASVPYDVERDQEQMDRRLTKLGFVGGKDFTVSQRAKEATYRRGINEGCQYMDPWQNPYLVRGVPQSQAELSQ--SRTTIGKAPAVHFYTSVGGNKSTVLPNGLFDVMLDAEYSGGVCQRHKANTVRFGVPDNCDIREE 366
BLAST of mRNA_C-tenellus_contig11651.1.1 vs. uniprot
Match: A0A482SGT5_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SGT5_9ARCH) HSP 1 Score: 99.8 bits (247), Expect = 2.480e-22 Identity = 58/170 (34.12%), Postives = 92/170 (54.12%), Query Frame = 1 Query: 1 RTRGYTKRGLEVDLNGQQHVPVLGQETRRSVQAQGPYETERLDAAAEQVLNRLKRVGPREFHAGYRVHK-SPYEGGINTGSPFMDWWKNPYLVRGIPKNQAEL--SKPLKESSLGKYPAKPYYIAVGGNKSAVLPNGRFDVILEAEQTGGVIRNALG-RSRRYGVPDTCD 498 RTRG KRGL D N +P+ ++R S+QA Y+ + +++ +R + R F G + + + + G P++D W NP LV+G+P +Q +L S L++ P K + VGGN+S L N FDVI +A++TGG I+ LG + R+G+P + D Sbjct: 22 RTRGIAKRGLVPDTNNTLRIPLKVLKSRLSIQASSHYDAIMQEERKQKMTHRYISMSARNFLGGGKTTIINNKDVPLAVGEPYLDAWANPMLVKGVPTSQHQLTESSRLQKPLFAAPPEKAFVSRVGGNRSTALANDLFDVIADAQETGGAIQRHLGTNTARFGLPASAD 191
BLAST of mRNA_C-tenellus_contig11651.1.1 vs. uniprot
Match: A0A0W8D5N4_PHYNI (N-acetyltransferase CML2 n=11 Tax=Phytophthora TaxID=4783 RepID=A0A0W8D5N4_PHYNI) HSP 1 Score: 91.3 bits (225), Expect = 9.100e-19 Identity = 45/115 (39.13%), Postives = 72/115 (62.61%), Query Frame = 1 Query: 82 RRSVQAQGPYETERLDAAAEQVLNRLKRVGPREFHAGYR----VHKSPYEGGINTGSPFMDWWKNPYLVRGIPKNQAELSKPLKESSLGKYPAKPYYIAVGGNKSAVLPNGRFDV 414 + ++QA GPY+ + + + ++L+R+G +F A Y V + GIN+G+ ++D W+NPY RG+P+N+ +L L ++LG+YP P+Y+ GGNKS VL N RFDV Sbjct: 172 KTTLQATGPYDAIQQEKRKQTKYHKLRRIGSSDFAAVYNPEQDVARKRNAPGINSGTEYVDEWRNPYKKRGVPRNKRDLLPQL--TTLGRYPDTPFYLTYGGNKSKVLANDRFDV 284
BLAST of mRNA_C-tenellus_contig11651.1.1 vs. uniprot
Match: D0NLE6_PHYIT (Uncharacterized protein n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0NLE6_PHYIT) HSP 1 Score: 90.1 bits (222), Expect = 5.070e-18 Identity = 44/115 (38.26%), Postives = 71/115 (61.74%), Query Frame = 1 Query: 82 RRSVQAQGPYETERLDAAAEQVLNRLKRVGPREFHAGYR----VHKSPYEGGINTGSPFMDWWKNPYLVRGIPKNQAELSKPLKESSLGKYPAKPYYIAVGGNKSAVLPNGRFDV 414 + ++Q+ GPY+ + + + ++L+R+G +F A Y V + IN+G+ ++D W+NPY RG+P+N+ +L L S+LG+YP P+Y+ GGNKS VL N RFDV Sbjct: 227 KTTLQSSGPYDAVQQEKRKQTKYHKLRRIGSSDFAAVYNPEQDVARKRNAPSINSGTDYVDEWRNPYKKRGVPRNKRDLLPQL--STLGRYPETPFYLTYGGNKSKVLANDRFDV 339
BLAST of mRNA_C-tenellus_contig11651.1.1 vs. uniprot
Match: A0A329S815_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S815_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 9.420e-17 Identity = 43/115 (37.39%), Postives = 69/115 (60.00%), Query Frame = 1 Query: 82 RRSVQAQGPYETERLDAAAEQVLNRLKRVGPREFHAGYR----VHKSPYEGGINTGSPFMDWWKNPYLVRGIPKNQAELSKPLKESSLGKYPAKPYYIAVGGNKSAVLPNGRFDV 414 + ++QA Y+ + + + ++L+R+G +F Y V + GIN+G+ ++D W+NPY RG+P+N+ +L L S+LG+YP P+Y+ GGNKS VL N RFDV Sbjct: 227 KTTLQATSSYDAVQQETRKQTKYHKLRRIGTSDFAVVYNPEQDVARKRNAPGINSGTEYVDEWRNPYKKRGVPRNKRDLLPQL--STLGRYPETPFYLTYGGNKSKVLANDRFDV 339 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11651.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig11651.1.1 >prot_C-tenellus_contig11651.1.1 ID=prot_C-tenellus_contig11651.1.1|Name=mRNA_C-tenellus_contig11651.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=196bp RTRGYTKRGLEVDLNGQQHVPVLGQETRRSVQAQGPYETERLDAAAEQVLback to top mRNA from alignment at C-tenellus_contig11651:316..2114+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig11651.1.1 ID=mRNA_C-tenellus_contig11651.1.1|Name=mRNA_C-tenellus_contig11651.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1799bp|location=Sequence derived from alignment at C-tenellus_contig11651:316..2114+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig11651:316..2114+ >mRNA_C-tenellus_contig11651.1.1 ID=mRNA_C-tenellus_contig11651.1.1|Name=mRNA_C-tenellus_contig11651.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=588bp|location=Sequence derived from alignment at C-tenellus_contig11651:316..2114+ (Choristocarpus tenellus KU2346)back to top |