mRNA_C-tenellus_contig1164.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig1164.1.1 vs. uniprot
Match: D7G0N5_ECTSI (SpoU_sub_bind domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0N5_ECTSI) HSP 1 Score: 353 bits (906), Expect = 4.910e-109 Identity = 198/334 (59.28%), Postives = 235/334 (70.36%), Query Frame = 1 Query: 979 STFQGQSSAEEQLEEVNSNVDNVYGINPVLNALQSNRREVLMLYVQDGLNPANKKDRAAADQIHDIVRENDITTTIMDKGYLNTLCGNRPHQGFVLKAKPLTFEPIICLDGPEEGDIAEGTSGESVGTDSRAE-----------------------------------QVWLALDEVTDPQNFGALLRSAHFFGATGVVVCSKNSASLTATVSKASAGAMETMTVHSTKNMMRFLKSSRENGWRIIGTAISERSTALEEIE--PRAAPTIVVLGNEGYGLRTNVVRECDVLVEIEKFS----SPGATSSTVDSLNVSVTGGVMLFHLLSGKARS 1857 +T+Q + S +E ++N D VYGI PVLN L++NRRE L LY QDGL PANKKDRAAA++I+DI RE D+ T DKGYLNTLCGNRPHQGF+LKA+PL FEPI+ L P D+ S E+ T++ AE QVWLALDEVTDPQNFGALLRSAHFFGA+GVV C+KNSA+LTATVSK+SAGA+E M VHST NMMRFLK SRENGWR++GT++SERS L E+ P A PTIVVLGNEGYG+RTNV+REC+ LVE+ + GAT STVDSLNVSVTGGV+LFHLL+G + Sbjct: 212 ATYQAELSPTHNADE-DTNFDMVYGIAPVLNVLRNNRREKLGLYCQDGLAPANKKDRAAANRIYDIARETDVPMTTTDKGYLNTLCGNRPHQGFILKARPLKFEPILFL--PRVEDVEADPSVEATATEADAETSPEHDXXXXXXXXXXXXXXXXXXXXXPLAAAATGQVWLALDEVTDPQNFGALLRSAHFFGASGVVACAKNSAALTATVSKSSAGAVEVMRVHSTANMMRFLKRSRENGWRVVGTSVSERSGPLHELPAGPGAPPTIVVLGNEGYGVRTNVLRECEFLVEVAGDGGGALAEGATPSTVDSLNVSVTGGVVLFHLLAGAKHA 542
BLAST of mRNA_C-tenellus_contig1164.1.1 vs. uniprot
Match: A0A6H5JJ28_9PHAE (SpoU_sub_bind domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ28_9PHAE) HSP 1 Score: 352 bits (903), Expect = 1.480e-107 Identity = 198/334 (59.28%), Postives = 234/334 (70.06%), Query Frame = 1 Query: 979 STFQGQSSAEEQLEEVNSNVDNVYGINPVLNALQSNRREVLMLYVQDGLNPANKKDRAAADQIHDIVRENDITTTIMDKGYLNTLCGNRPHQGFVLKAKPLTFEPIICLDGPEEGDIAEGTSGESVGTDSRAE-----------------------------------QVWLALDEVTDPQNFGALLRSAHFFGATGVVVCSKNSASLTATVSKASAGAMETMTVHSTKNMMRFLKSSRENGWRIIGTAISERSTALEEIE--PRAAPTIVVLGNEGYGLRTNVVRECDVLVEIEKFS----SPGATSSTVDSLNVSVTGGVMLFHLLSGKARS 1857 + +Q + S ++E ++N D VYGI PVLN L++NRRE L LY QDGL PANKKDRAAA++I+DI RE D+ T DKGYLNTLCGNRPHQGF+LKA+PL FEPI+ L P D+ S E+ T + AE QVWLALDEVTDPQNFGALLRSAHFFGA+GVV C+KNSA+LTATVSK+SAGA+E M VHST NMMRFLK SRENGWR++GT++SERS L E+ P A PTIVVLGNEGYG+RTNV+RECD LVE+ + GAT STVDSLNVSVTGGV+LFHLL+G + Sbjct: 296 ANYQAELSPTHNVDE-DTNFDMVYGIAPVLNVLRNNRREKLGLYCQDGLAPANKKDRAAANRIYDIARETDVPMTTTDKGYLNTLCGNRPHQGFILKARPLKFEPILFL--PRVKDVEADPSVEATATAADAETSPEHDXXXXXXXXXXXXXXXXXXXXXPLAAAATGQVWLALDEVTDPQNFGALLRSAHFFGASGVVACAKNSAALTATVSKSSAGAVEVMRVHSTANMMRFLKRSRENGWRVVGTSVSERSGPLHELPAGPGAPPTIVVLGNEGYGVRTNVLRECDFLVEVAGDGGGALAEGATPSTVDSLNVSVTGGVVLFHLLAGAKHA 626
BLAST of mRNA_C-tenellus_contig1164.1.1 vs. uniprot
Match: A0A835YSW2_9STRA (Alpha/beta knot methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSW2_9STRA) HSP 1 Score: 299 bits (765), Expect = 2.250e-88 Identity = 170/312 (54.49%), Postives = 218/312 (69.87%), Query Frame = 1 Query: 952 ASGWMKDELSTFQGQSSAEEQLEEVNSNVDNVYGINPVLNALQSNRREVLM-LYVQDGLNPANKKDRAAADQIHDIVRENDITTTIMDKGYLNTLCGNRPHQGFVLKAKPLTFEPIICLDGPEEGDIAEGTSGESVGTDSRAEQVWLALDEVTDPQNFGALLRSAHFFGATGVVVCSKNSASLTATVSKASAGAMETMTVHSTKNMMRFLKSSRENGWRIIGTAISERSTALEEIEPRAAPTIVVLGNEGYGLRTNVVRE------------CDVLVEIEKFSSPGATSSTVDSLNVSVTGGVMLFHLLSGK 1848 AS W+++ELS + E+ +EE VDNVYGI+PVLNAL + RR L+ L+VQ+G+ P ++KDRAA +I + E + T +DKGYLN+LCGNRPHQGFVL+ +PL FEP+ L P + D G A +WLALDEVTDPQN GALLRSAHFFGA GVV C+KNSASLT TVSKAS+GA+E MTVHST NMM+FL+ SR NGWR++GTA+ + ++ + A PTIVVLGNEG+GLRT+V+RE C+VLVE++ +P A +STV+SLNVSVTGG++L+ L G Sbjct: 215 ASDWLEEELSDVWVEPG-EDSVEEDEGEVDNVYGISPVLNALTAKRRAGLLGLFVQEGITPRDRKDRAALVKIQQLAEEVALPVTFIDKGYLNSLCGNRPHQGFVLRCRPLEFEPLPHLPAPPK-DPERGVG---------AAPLWLALDEVTDPQNLGALLRSAHFFGADGVVACAKNSASLTPTVSKASSGALEVMTVHSTNNMMKFLRQSRANGWRVVGTALGREAKPVQSLHT-AVPTIVVLGNEGHGLRTSVLREHRCTLIVLPCVQCEVLVEVQ--GAPRA-ASTVESLNVSVTGGLLLYALRQGS 511
BLAST of mRNA_C-tenellus_contig1164.1.1 vs. uniprot
Match: A0A7S2WAK4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WAK4_9STRA) HSP 1 Score: 236 bits (601), Expect = 2.270e-67 Identity = 139/275 (50.55%), Postives = 176/275 (64.00%), Query Frame = 1 Query: 1036 VDNVYGINPVLNALQSNRREV-----LMLYVQDGLNPANKKDRAAADQIHDIVRENDITTTIMDKGYLNTLCGNRPHQGFVLKAKPLTFEPIICLDGPEEGDIAEGTSGESVGTDSRAEQVWLALDEVTDPQNFGALLRSAHFFGATGVVVCSKNSASLTATVSKASAGAMETMTVHSTKNMMRFLKSSRENGWRIIGTAISERSTALEEIEPRAAPTIVVLGNEGYGLRTNVVRECDVLVEIEKFSSPGATSST-VDSLNVSVTGGVMLFHLLS 1842 +D +YG+NPVLNAL+S RRE + + +G+ ++K+ +I D+ E ++ +K LN L NRPHQG VL A PL E LDG E EG GE Q WLALDEV DPQN GALLRSA F GATGVV C+KNSA LT VSKASAGA+E M VHSTKNM +FL S+ NGWR++GT++ S +L +++P+ PTI+VLGNEG+GLRTNV+ C+V V I P + VDSLNVSV+GG++L H LS Sbjct: 59 MDLLYGVNPVLNALRSGRRESFGDLRVQASLMEGVLKRSRKNPQLV-RIVDVAEEREVPVVWTEKHDLNMLANNRPHQGVVLAASPLEPE---SLDGLEPATADEGLEGEGGSA-----QCWLALDEVVDPQNLGALLRSACFLGATGVVYCAKNSAGLTPAVSKASAGALEVMDVHSTKNMPKFLDKSKANGWRVVGTSLEPSSVSLSQVDPQE-PTILVLGNEGHGLRTNVMSCCEVFVRIAGQREPASDGDPDVDSLNVSVSGGILLNHFLS 323
BLAST of mRNA_C-tenellus_contig1164.1.1 vs. uniprot
Match: A0A7S2CGL2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CGL2_9STRA) HSP 1 Score: 228 bits (580), Expect = 1.740e-63 Identity = 135/293 (46.08%), Postives = 185/293 (63.14%), Query Frame = 1 Query: 982 TFQGQSSAEEQLEEVNSNVDNVYGINPVLNALQSNRR-EVLMLYVQDGLNPANKKDRAAADQIHDIVRE-NDITTTIMDKGYLNTLCGNRPHQGFVLKAKPLTFEPIICLDGPEEGDIAEGTSGESVGTDSRAEQVWLALDEVTDPQNFGALLRSAHFFGATGVVVCSKNSASLTATVSKASAGAMETMTVHSTKNMMRFLKSSRENGWRIIGTAISERSTALEEIEPRAAPTIVVLGNEGYGLRTNVVRECDVLVEIEKFS-----SPGATSSTVDSLNVSVTGGVMLFHLL 1839 +F+GQS+ ++ S D++YGI PVLNAL +R + L +Q G +++ A +I + E + + +++DK LN L GNRPHQG VL A+PL + + L P+EG WLALDEV DPQN GAL+RSA F GA GV+ KNSA L+ +VSKASAGAME + +H+TKN+ R L+++R++GWR++GTA+S+ S LEE++P PTIVVLGNEG+GLRTNV R CDV V I + + A +DSLNVSV+GG++L HLL Sbjct: 119 SFEGQSTPRAPVKREPSPFDHIYGIQPVLNALLMKQRPRFVELMLQQGSFQNPQREEGALGRIASLAGEISGLQMSLVDKHDLNMLSGNRPHQGVVLLAEPLPLQTLDTLPSPDEGTTP----------------CWLALDEVVDPQNLGALIRSACFLGAEGVITSVKNSAPLSPSVSKASAGAMELVNIHATKNLPRLLENARQDGWRVVGTALSDDSIPLEELKP-GRPTIVVLGNEGHGLRTNVRRACDVTVRIARGTRSMKQKEAAELGDLDSLNVSVSGGILLHHLL 394
BLAST of mRNA_C-tenellus_contig1164.1.1 vs. uniprot
Match: A0A7S0PUZ7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PUZ7_9EUKA) HSP 1 Score: 217 bits (552), Expect = 5.770e-60 Identity = 131/279 (46.95%), Postives = 174/279 (62.37%), Query Frame = 1 Query: 1033 NVDNVYGINPVLNALQSNRREVLMLYVQDGLNPANKKDRAAADQIHDIVRENDITTTIMDKGYLNTLCGNRPHQGFVLKAKPLTFEPIICLDGP--EEGDIAEGTSGESVGTDSRAEQVWLALDEVTDPQNFGALLRSAHFFGATGVVVCSKNSASLTATVSKASAGAMETMTVHSTKNMMRFLKSSRENGWRIIGTAISERSTALEEIEPRAAPTIVVLGNEGYGLRTNVVRECDVLVEIEKFSSPGAT--------SSTVDSLNVSVTGGVMLFHLL 1839 N D +YG++PV AL+ R L +Q+ L + +KD A ++ + E+ + +DKG LN LCGNRPHQG VL+A+PL+F I P + G +AE ++ VWLALDEVTDPQN GALLR+A F G GVVV KNSA L+ VSKAS+GAME M VHSTKN++ FL +R GW ++G A+ + S +++ + PT++VLG+EG GLRTNV+R C+ LV I + S AT SS VDSLNVSV G V+L+ LL Sbjct: 93 NSDFLYGVSPVQAALRQRWRPCERLLLQENLQLSKRKDAGAILEVQRLAEEHQLPIQRVDKGTLNGLCGNRPHQGVVLQAQPLSFNRISKPPAPSSDAGGVAEDAP------EAGRRNVWLALDEVTDPQNLGALLRTALFLGVDGVVVSEKNSAPLSPAVSKASSGAMELMQVHSTKNLVSFLDDARAGGWLVVGAAL-DNSVLPAQLDSQR-PTVLVLGSEGRGLRTNVLRACEQLVRIPRAPSGTATVAAGGTDHSSLVDSLNVSVAGAVLLYALL 363
BLAST of mRNA_C-tenellus_contig1164.1.1 vs. uniprot
Match: A9T6G4_PHYPA (SpoU_sub_bind domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9T6G4_PHYPA) HSP 1 Score: 213 bits (543), Expect = 9.710e-60 Identity = 127/274 (46.35%), Postives = 164/274 (59.85%), Query Frame = 1 Query: 1045 VYGINPVLNALQSNRREVLMLYVQ----DGLNPANKKDRAAADQIHDIVRENDITTTIMDKGYLNTLCGNRPHQGFVLKAKPLTFEPIICLDGPEEGDIAEGTSGESVGTDSRAEQVWLALDEVTDPQNFGALLRSAHFFGATGVVVCSKNSASLTATVSKASAGAMETMTVHSTKNMMRFLKSSRENGWRIIGTAISERSTALEEIEPRAAPTIVVLGNEGYGLRTNVVRECDVLVEIEKFSSPGATSSTVDSLNVSVTGGVMLFHLLSGKAR 1854 VYG+ P+ A + RR LYVQ D + +KD+ A + I + ++ + K +LN L NRPHQG VL A PL P L+ P I +G S VW+ALDEV DPQNFGA+LRS H+ GATGVVVC+KNSA L+ VSKASAGA+E M + S +NMM+FL +S +NGWR +G + R+ ++E+EP PTI+VLGNEG GLRTNV R C LV I+ + VDSLNVSV G++L LLS + Sbjct: 21 VYGVAPIRAAFLAERRIFHTLYVQTNLVDNIATGKRKDKQAVNWILNRAHNLEMKVETVSKQHLNLLVDNRPHQGLVLDASPLELVPCEYLERPS---IQDGRS-----------PVWVALDEVIDPQNFGAILRSCHYLGATGVVVCAKNSAPLSGVVSKASAGALEVMEIQSCRNMMKFLDTSVQNGWRAVGASSEPRALPIQELEP-GLPTILVLGNEGRGLRTNVKRSCTELVSIK--------ADAVDSLNVSVAAGILLHDLLSRSTQ 271
BLAST of mRNA_C-tenellus_contig1164.1.1 vs. uniprot
Match: A0A251TQ88_HELAN (Putative rRNA methyltransferase 1 n=4 Tax=Helianthus annuus TaxID=4232 RepID=A0A251TQ88_HELAN) HSP 1 Score: 212 bits (539), Expect = 3.280e-59 Identity = 132/283 (46.64%), Postives = 171/283 (60.42%), Query Frame = 1 Query: 1045 VYGINPVLNALQSNRREVLMLYVQDGL----NPANKKDRAAADQIHDIVRENDITTTIMDKGYLNTLCGNRPHQGFVLKAKPLTFEPIICLDGPEEGDIAEGTSGESVGTDSRAEQVWLALDEVTDPQNFGALLRSAHFFGATGVVVCSKNSASLTATVSKASAGAMETMTVHSTKNMMRFLKSSRENGWRIIGTAISERSTALEEIEPRAAPTIVVLGNEGYGLRTNVVRECDVLVEIEK----FSSPGATSS------TVDSLNVSVTGGVMLFHLLSGKA 1851 VYG+ PVL AL +NRRE +LYVQ+G+ N KKD+ A +++ + + +TT + K LN NRPHQG VL A PL I LD E EGT +WLALDEV DPQN GA++RSA+FFGA+GVV+C+KNSA L+ VSKASAG++E + S KNMM+FL SS ENGWR++G +++ R+ + E+ APTI+VLG+EG GLR V R C LV+I S G V+SLNVSV GV+L HL K+ Sbjct: 6 VYGVGPVLAALSANRREFYVLYVQEGIDLTGNNKKKKDKKAFEKVLKLADKIGLTTKEISKHDLNMFADNRPHQGLVLDASPLEMVNIRQLDRVAEN---EGTG------------LWLALDEVMDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELTELRSCKNMMQFLVSSAENGWRVLGGSVASRAVDINEVVT-GAPTILVLGSEGTGLRPLVERSCTQLVKIPGNIPVHLSAGLEDVDPLSFVAVESLNVSVAAGVLLHHLAGSKS 272
BLAST of mRNA_C-tenellus_contig1164.1.1 vs. uniprot
Match: A0A388JU39_CHABU (SpoU_sub_bind domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JU39_CHABU) HSP 1 Score: 226 bits (576), Expect = 4.970e-59 Identity = 131/268 (48.88%), Postives = 164/268 (61.19%), Query Frame = 1 Query: 1045 VYGINPVLNALQSNRREVLMLYVQDGLNPANKKDRAAADQIHDIVRENDITTTIMDKGYLNTLCGNRPHQGFVLKAKPLTFEPIICLDGPEEG-DIAEGTSGESVGTDSRAEQVWLALDEVTDPQNFGALLRSAHFFGATGVVVCSKNSASLTATVSKASAGAMETMTVHSTKNMMRFLKSSRENGWRIIGTAISERSTALEEIEPRAAPTIVVLGNEGYGLRTNVVRECDVLVEIEKFSSP--GATSSTVDSLNVSVTGGVMLFHLL 1839 +YG++PV+ AL + RRE+ LYVQ+GL KKDR D + E +T + K LN LC NRPHQG VL A PL F + + PEE D G V W+ALDEV DPQNFGA+LRSA+F GATGVV C++NSA L+A VSKAS+GAME M V+S KNM +FL R NGWR++G + S + A ++ R PTI V+GNEG GLR NV REC +V I + G +DSLNVSV G++L LL Sbjct: 561 IYGVSPVVAALGALRREIYGLYVQEGLESKRKKDRRGVDMVMKKADELRLTAETVSKHELNLLCDNRPHQGLVLDASPLQFVDVKEIPPPEEDKDWQHLPDGRVVAP------CWVALDEVMDPQNFGAVLRSAYFLGATGVVTCARNSAPLSAVVSKASSGAMEAMQVYSCKNMFKFLSQCRANGWRVLGASSSPTAVACRDLA-RGVPTIFVVGNEGVGLRENVQRECTEMVRIPGSARTDLGGRPFVIDSLNVSVAAGILLHELL 821
BLAST of mRNA_C-tenellus_contig1164.1.1 vs. uniprot
Match: A0A087HDZ9_ARAAL (SpoU_sub_bind domain-containing protein n=1 Tax=Arabis alpina TaxID=50452 RepID=A0A087HDZ9_ARAAL) HSP 1 Score: 219 bits (558), Expect = 1.660e-58 Identity = 133/288 (46.18%), Postives = 171/288 (59.38%), Query Frame = 1 Query: 1045 VYGINPVLNALQSNRREVLMLYVQDGL----NPANKKDRAAADQIHDIVRENDITTTIMDKGYLNTLCGNRPHQGFVLKAKPLTFEPIICLDGPEEGDIAEGTSGESVGTDSRAEQVWLALDEVTDPQNFGALLRSAHFFGATGVVVCSKNSASLTATVSKASAGAMETMTVHSTKNMMRFLKSSRENGWRIIGTAISERSTALEEIEPRAAPTIVVLGNEGYGLRTNVVRECDVLVEIEKFSSPGATSST---------------VDSLNVSVTGGVMLFHLLSGKA 1851 VYG+NPVL AL RRE LYVQ+GL N KKD+ +++ I + + K LN + NRPHQG VL A PL + LD V ++ +W+ALDEVTDPQN GA++RSA+FFGATG+VVC+KNSA L+A VSKASAG++E M + KNMM+FL+SS ENGWR++G ++S ++ AL E+ P +PTI+VLGNEG GLR V R C LV I S P +T V+SLNVSV G+ L HL+ KA Sbjct: 311 VYGVNPVLAALSVGRREFYALYVQEGLDLSSNNRKKKDKKGFEKVLKISEKLGLNIKETSKHDLNMVADNRPHQGLVLDASPLELVKVKELD--------------PVSSEEEKSSLWVALDEVTDPQNLGAIIRSAYFFGATGIVVCAKNSAPLSAVVSKASAGSLEVMELRYCKNMMQFLESSAENGWRVVGGSVSPKAVALNEVLP-GSPTILVLGNEGTGLRPLVERSCTELVRISG-SMPNDVVATESDDAEGEGLRSFLAVESLNVSVAAGLFLHHLIGNKA 582 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1164.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1164.1.1 >prot_C-tenellus_contig1164.1.1 ID=prot_C-tenellus_contig1164.1.1|Name=mRNA_C-tenellus_contig1164.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=588bp MPIHSCWIQSQGLRLAIAVTALASIVGQGEGLHPMNPLAGCARTMSVRSRback to top mRNA from alignment at C-tenellus_contig1164:3623..6402+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig1164.1.1 ID=mRNA_C-tenellus_contig1164.1.1|Name=mRNA_C-tenellus_contig1164.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2780bp|location=Sequence derived from alignment at C-tenellus_contig1164:3623..6402+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig1164:3623..6402+ >mRNA_C-tenellus_contig1164.1.1 ID=mRNA_C-tenellus_contig1164.1.1|Name=mRNA_C-tenellus_contig1164.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1764bp|location=Sequence derived from alignment at C-tenellus_contig1164:3623..6402+ (Choristocarpus tenellus KU2346)back to top |