mRNA_C-tenellus_contig1164.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig1164.1.1
Unique NamemRNA_C-tenellus_contig1164.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig1164.1.1 vs. uniprot
Match: D7G0N5_ECTSI (SpoU_sub_bind domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0N5_ECTSI)

HSP 1 Score: 353 bits (906), Expect = 4.910e-109
Identity = 198/334 (59.28%), Postives = 235/334 (70.36%), Query Frame = 1
Query:  979 STFQGQSSAEEQLEEVNSNVDNVYGINPVLNALQSNRREVLMLYVQDGLNPANKKDRAAADQIHDIVRENDITTTIMDKGYLNTLCGNRPHQGFVLKAKPLTFEPIICLDGPEEGDIAEGTSGESVGTDSRAE-----------------------------------QVWLALDEVTDPQNFGALLRSAHFFGATGVVVCSKNSASLTATVSKASAGAMETMTVHSTKNMMRFLKSSRENGWRIIGTAISERSTALEEIE--PRAAPTIVVLGNEGYGLRTNVVRECDVLVEIEKFS----SPGATSSTVDSLNVSVTGGVMLFHLLSGKARS 1857
            +T+Q + S     +E ++N D VYGI PVLN L++NRRE L LY QDGL PANKKDRAAA++I+DI RE D+  T  DKGYLNTLCGNRPHQGF+LKA+PL FEPI+ L  P   D+    S E+  T++ AE                                   QVWLALDEVTDPQNFGALLRSAHFFGA+GVV C+KNSA+LTATVSK+SAGA+E M VHST NMMRFLK SRENGWR++GT++SERS  L E+   P A PTIVVLGNEGYG+RTNV+REC+ LVE+        + GAT STVDSLNVSVTGGV+LFHLL+G   +
Sbjct:  212 ATYQAELSPTHNADE-DTNFDMVYGIAPVLNVLRNNRREKLGLYCQDGLAPANKKDRAAANRIYDIARETDVPMTTTDKGYLNTLCGNRPHQGFILKARPLKFEPILFL--PRVEDVEADPSVEATATEADAETSPEHDXXXXXXXXXXXXXXXXXXXXXPLAAAATGQVWLALDEVTDPQNFGALLRSAHFFGASGVVACAKNSAALTATVSKSSAGAVEVMRVHSTANMMRFLKRSRENGWRVVGTSVSERSGPLHELPAGPGAPPTIVVLGNEGYGVRTNVLRECEFLVEVAGDGGGALAEGATPSTVDSLNVSVTGGVVLFHLLAGAKHA 542          
BLAST of mRNA_C-tenellus_contig1164.1.1 vs. uniprot
Match: A0A6H5JJ28_9PHAE (SpoU_sub_bind domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ28_9PHAE)

HSP 1 Score: 352 bits (903), Expect = 1.480e-107
Identity = 198/334 (59.28%), Postives = 234/334 (70.06%), Query Frame = 1
Query:  979 STFQGQSSAEEQLEEVNSNVDNVYGINPVLNALQSNRREVLMLYVQDGLNPANKKDRAAADQIHDIVRENDITTTIMDKGYLNTLCGNRPHQGFVLKAKPLTFEPIICLDGPEEGDIAEGTSGESVGTDSRAE-----------------------------------QVWLALDEVTDPQNFGALLRSAHFFGATGVVVCSKNSASLTATVSKASAGAMETMTVHSTKNMMRFLKSSRENGWRIIGTAISERSTALEEIE--PRAAPTIVVLGNEGYGLRTNVVRECDVLVEIEKFS----SPGATSSTVDSLNVSVTGGVMLFHLLSGKARS 1857
            + +Q + S    ++E ++N D VYGI PVLN L++NRRE L LY QDGL PANKKDRAAA++I+DI RE D+  T  DKGYLNTLCGNRPHQGF+LKA+PL FEPI+ L  P   D+    S E+  T + AE                                   QVWLALDEVTDPQNFGALLRSAHFFGA+GVV C+KNSA+LTATVSK+SAGA+E M VHST NMMRFLK SRENGWR++GT++SERS  L E+   P A PTIVVLGNEGYG+RTNV+RECD LVE+        + GAT STVDSLNVSVTGGV+LFHLL+G   +
Sbjct:  296 ANYQAELSPTHNVDE-DTNFDMVYGIAPVLNVLRNNRREKLGLYCQDGLAPANKKDRAAANRIYDIARETDVPMTTTDKGYLNTLCGNRPHQGFILKARPLKFEPILFL--PRVKDVEADPSVEATATAADAETSPEHDXXXXXXXXXXXXXXXXXXXXXPLAAAATGQVWLALDEVTDPQNFGALLRSAHFFGASGVVACAKNSAALTATVSKSSAGAVEVMRVHSTANMMRFLKRSRENGWRVVGTSVSERSGPLHELPAGPGAPPTIVVLGNEGYGVRTNVLRECDFLVEVAGDGGGALAEGATPSTVDSLNVSVTGGVVLFHLLAGAKHA 626          
BLAST of mRNA_C-tenellus_contig1164.1.1 vs. uniprot
Match: A0A835YSW2_9STRA (Alpha/beta knot methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSW2_9STRA)

HSP 1 Score: 299 bits (765), Expect = 2.250e-88
Identity = 170/312 (54.49%), Postives = 218/312 (69.87%), Query Frame = 1
Query:  952 ASGWMKDELSTFQGQSSAEEQLEEVNSNVDNVYGINPVLNALQSNRREVLM-LYVQDGLNPANKKDRAAADQIHDIVRENDITTTIMDKGYLNTLCGNRPHQGFVLKAKPLTFEPIICLDGPEEGDIAEGTSGESVGTDSRAEQVWLALDEVTDPQNFGALLRSAHFFGATGVVVCSKNSASLTATVSKASAGAMETMTVHSTKNMMRFLKSSRENGWRIIGTAISERSTALEEIEPRAAPTIVVLGNEGYGLRTNVVRE------------CDVLVEIEKFSSPGATSSTVDSLNVSVTGGVMLFHLLSGK 1848
            AS W+++ELS    +   E+ +EE    VDNVYGI+PVLNAL + RR  L+ L+VQ+G+ P ++KDRAA  +I  +  E  +  T +DKGYLN+LCGNRPHQGFVL+ +PL FEP+  L  P + D   G           A  +WLALDEVTDPQN GALLRSAHFFGA GVV C+KNSASLT TVSKAS+GA+E MTVHST NMM+FL+ SR NGWR++GTA+   +  ++ +   A PTIVVLGNEG+GLRT+V+RE            C+VLVE++   +P A +STV+SLNVSVTGG++L+ L  G 
Sbjct:  215 ASDWLEEELSDVWVEPG-EDSVEEDEGEVDNVYGISPVLNALTAKRRAGLLGLFVQEGITPRDRKDRAALVKIQQLAEEVALPVTFIDKGYLNSLCGNRPHQGFVLRCRPLEFEPLPHLPAPPK-DPERGVG---------AAPLWLALDEVTDPQNLGALLRSAHFFGADGVVACAKNSASLTPTVSKASSGALEVMTVHSTNNMMKFLRQSRANGWRVVGTALGREAKPVQSLHT-AVPTIVVLGNEGHGLRTSVLREHRCTLIVLPCVQCEVLVEVQ--GAPRA-ASTVESLNVSVTGGLLLYALRQGS 511          
BLAST of mRNA_C-tenellus_contig1164.1.1 vs. uniprot
Match: A0A7S2WAK4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WAK4_9STRA)

HSP 1 Score: 236 bits (601), Expect = 2.270e-67
Identity = 139/275 (50.55%), Postives = 176/275 (64.00%), Query Frame = 1
Query: 1036 VDNVYGINPVLNALQSNRREV-----LMLYVQDGLNPANKKDRAAADQIHDIVRENDITTTIMDKGYLNTLCGNRPHQGFVLKAKPLTFEPIICLDGPEEGDIAEGTSGESVGTDSRAEQVWLALDEVTDPQNFGALLRSAHFFGATGVVVCSKNSASLTATVSKASAGAMETMTVHSTKNMMRFLKSSRENGWRIIGTAISERSTALEEIEPRAAPTIVVLGNEGYGLRTNVVRECDVLVEIEKFSSPGATSST-VDSLNVSVTGGVMLFHLLS 1842
            +D +YG+NPVLNAL+S RRE      +   + +G+   ++K+     +I D+  E ++     +K  LN L  NRPHQG VL A PL  E    LDG E     EG  GE         Q WLALDEV DPQN GALLRSA F GATGVV C+KNSA LT  VSKASAGA+E M VHSTKNM +FL  S+ NGWR++GT++   S +L +++P+  PTI+VLGNEG+GLRTNV+  C+V V I     P +     VDSLNVSV+GG++L H LS
Sbjct:   59 MDLLYGVNPVLNALRSGRRESFGDLRVQASLMEGVLKRSRKNPQLV-RIVDVAEEREVPVVWTEKHDLNMLANNRPHQGVVLAASPLEPE---SLDGLEPATADEGLEGEGGSA-----QCWLALDEVVDPQNLGALLRSACFLGATGVVYCAKNSAGLTPAVSKASAGALEVMDVHSTKNMPKFLDKSKANGWRVVGTSLEPSSVSLSQVDPQE-PTILVLGNEGHGLRTNVMSCCEVFVRIAGQREPASDGDPDVDSLNVSVSGGILLNHFLS 323          
BLAST of mRNA_C-tenellus_contig1164.1.1 vs. uniprot
Match: A0A7S2CGL2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CGL2_9STRA)

HSP 1 Score: 228 bits (580), Expect = 1.740e-63
Identity = 135/293 (46.08%), Postives = 185/293 (63.14%), Query Frame = 1
Query:  982 TFQGQSSAEEQLEEVNSNVDNVYGINPVLNALQSNRR-EVLMLYVQDGLNPANKKDRAAADQIHDIVRE-NDITTTIMDKGYLNTLCGNRPHQGFVLKAKPLTFEPIICLDGPEEGDIAEGTSGESVGTDSRAEQVWLALDEVTDPQNFGALLRSAHFFGATGVVVCSKNSASLTATVSKASAGAMETMTVHSTKNMMRFLKSSRENGWRIIGTAISERSTALEEIEPRAAPTIVVLGNEGYGLRTNVVRECDVLVEIEKFS-----SPGATSSTVDSLNVSVTGGVMLFHLL 1839
            +F+GQS+    ++   S  D++YGI PVLNAL   +R   + L +Q G     +++  A  +I  +  E + +  +++DK  LN L GNRPHQG VL A+PL  + +  L  P+EG                    WLALDEV DPQN GAL+RSA F GA GV+   KNSA L+ +VSKASAGAME + +H+TKN+ R L+++R++GWR++GTA+S+ S  LEE++P   PTIVVLGNEG+GLRTNV R CDV V I + +        A    +DSLNVSV+GG++L HLL
Sbjct:  119 SFEGQSTPRAPVKREPSPFDHIYGIQPVLNALLMKQRPRFVELMLQQGSFQNPQREEGALGRIASLAGEISGLQMSLVDKHDLNMLSGNRPHQGVVLLAEPLPLQTLDTLPSPDEGTTP----------------CWLALDEVVDPQNLGALIRSACFLGAEGVITSVKNSAPLSPSVSKASAGAMELVNIHATKNLPRLLENARQDGWRVVGTALSDDSIPLEELKP-GRPTIVVLGNEGHGLRTNVRRACDVTVRIARGTRSMKQKEAAELGDLDSLNVSVSGGILLHHLL 394          
BLAST of mRNA_C-tenellus_contig1164.1.1 vs. uniprot
Match: A0A7S0PUZ7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PUZ7_9EUKA)

HSP 1 Score: 217 bits (552), Expect = 5.770e-60
Identity = 131/279 (46.95%), Postives = 174/279 (62.37%), Query Frame = 1
Query: 1033 NVDNVYGINPVLNALQSNRREVLMLYVQDGLNPANKKDRAAADQIHDIVRENDITTTIMDKGYLNTLCGNRPHQGFVLKAKPLTFEPIICLDGP--EEGDIAEGTSGESVGTDSRAEQVWLALDEVTDPQNFGALLRSAHFFGATGVVVCSKNSASLTATVSKASAGAMETMTVHSTKNMMRFLKSSRENGWRIIGTAISERSTALEEIEPRAAPTIVVLGNEGYGLRTNVVRECDVLVEIEKFSSPGAT--------SSTVDSLNVSVTGGVMLFHLL 1839
            N D +YG++PV  AL+   R    L +Q+ L  + +KD  A  ++  +  E+ +    +DKG LN LCGNRPHQG VL+A+PL+F  I     P  + G +AE         ++    VWLALDEVTDPQN GALLR+A F G  GVVV  KNSA L+  VSKAS+GAME M VHSTKN++ FL  +R  GW ++G A+ + S    +++ +  PT++VLG+EG GLRTNV+R C+ LV I +  S  AT        SS VDSLNVSV G V+L+ LL
Sbjct:   93 NSDFLYGVSPVQAALRQRWRPCERLLLQENLQLSKRKDAGAILEVQRLAEEHQLPIQRVDKGTLNGLCGNRPHQGVVLQAQPLSFNRISKPPAPSSDAGGVAEDAP------EAGRRNVWLALDEVTDPQNLGALLRTALFLGVDGVVVSEKNSAPLSPAVSKASSGAMELMQVHSTKNLVSFLDDARAGGWLVVGAAL-DNSVLPAQLDSQR-PTVLVLGSEGRGLRTNVLRACEQLVRIPRAPSGTATVAAGGTDHSSLVDSLNVSVAGAVLLYALL 363          
BLAST of mRNA_C-tenellus_contig1164.1.1 vs. uniprot
Match: A9T6G4_PHYPA (SpoU_sub_bind domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9T6G4_PHYPA)

HSP 1 Score: 213 bits (543), Expect = 9.710e-60
Identity = 127/274 (46.35%), Postives = 164/274 (59.85%), Query Frame = 1
Query: 1045 VYGINPVLNALQSNRREVLMLYVQ----DGLNPANKKDRAAADQIHDIVRENDITTTIMDKGYLNTLCGNRPHQGFVLKAKPLTFEPIICLDGPEEGDIAEGTSGESVGTDSRAEQVWLALDEVTDPQNFGALLRSAHFFGATGVVVCSKNSASLTATVSKASAGAMETMTVHSTKNMMRFLKSSRENGWRIIGTAISERSTALEEIEPRAAPTIVVLGNEGYGLRTNVVRECDVLVEIEKFSSPGATSSTVDSLNVSVTGGVMLFHLLSGKAR 1854
            VYG+ P+  A  + RR    LYVQ    D +    +KD+ A + I +     ++    + K +LN L  NRPHQG VL A PL   P   L+ P    I +G S            VW+ALDEV DPQNFGA+LRS H+ GATGVVVC+KNSA L+  VSKASAGA+E M + S +NMM+FL +S +NGWR +G +   R+  ++E+EP   PTI+VLGNEG GLRTNV R C  LV I+        +  VDSLNVSV  G++L  LLS   +
Sbjct:   21 VYGVAPIRAAFLAERRIFHTLYVQTNLVDNIATGKRKDKQAVNWILNRAHNLEMKVETVSKQHLNLLVDNRPHQGLVLDASPLELVPCEYLERPS---IQDGRS-----------PVWVALDEVIDPQNFGAILRSCHYLGATGVVVCAKNSAPLSGVVSKASAGALEVMEIQSCRNMMKFLDTSVQNGWRAVGASSEPRALPIQELEP-GLPTILVLGNEGRGLRTNVKRSCTELVSIK--------ADAVDSLNVSVAAGILLHDLLSRSTQ 271          
BLAST of mRNA_C-tenellus_contig1164.1.1 vs. uniprot
Match: A0A251TQ88_HELAN (Putative rRNA methyltransferase 1 n=4 Tax=Helianthus annuus TaxID=4232 RepID=A0A251TQ88_HELAN)

HSP 1 Score: 212 bits (539), Expect = 3.280e-59
Identity = 132/283 (46.64%), Postives = 171/283 (60.42%), Query Frame = 1
Query: 1045 VYGINPVLNALQSNRREVLMLYVQDGL----NPANKKDRAAADQIHDIVRENDITTTIMDKGYLNTLCGNRPHQGFVLKAKPLTFEPIICLDGPEEGDIAEGTSGESVGTDSRAEQVWLALDEVTDPQNFGALLRSAHFFGATGVVVCSKNSASLTATVSKASAGAMETMTVHSTKNMMRFLKSSRENGWRIIGTAISERSTALEEIEPRAAPTIVVLGNEGYGLRTNVVRECDVLVEIEK----FSSPGATSS------TVDSLNVSVTGGVMLFHLLSGKA 1851
            VYG+ PVL AL +NRRE  +LYVQ+G+    N   KKD+ A +++  +  +  +TT  + K  LN    NRPHQG VL A PL    I  LD   E    EGT             +WLALDEV DPQN GA++RSA+FFGA+GVV+C+KNSA L+  VSKASAG++E   + S KNMM+FL SS ENGWR++G +++ R+  + E+    APTI+VLG+EG GLR  V R C  LV+I        S G           V+SLNVSV  GV+L HL   K+
Sbjct:    6 VYGVGPVLAALSANRREFYVLYVQEGIDLTGNNKKKKDKKAFEKVLKLADKIGLTTKEISKHDLNMFADNRPHQGLVLDASPLEMVNIRQLDRVAEN---EGTG------------LWLALDEVMDPQNLGAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELTELRSCKNMMQFLVSSAENGWRVLGGSVASRAVDINEVVT-GAPTILVLGSEGTGLRPLVERSCTQLVKIPGNIPVHLSAGLEDVDPLSFVAVESLNVSVAAGVLLHHLAGSKS 272          
BLAST of mRNA_C-tenellus_contig1164.1.1 vs. uniprot
Match: A0A388JU39_CHABU (SpoU_sub_bind domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JU39_CHABU)

HSP 1 Score: 226 bits (576), Expect = 4.970e-59
Identity = 131/268 (48.88%), Postives = 164/268 (61.19%), Query Frame = 1
Query: 1045 VYGINPVLNALQSNRREVLMLYVQDGLNPANKKDRAAADQIHDIVRENDITTTIMDKGYLNTLCGNRPHQGFVLKAKPLTFEPIICLDGPEEG-DIAEGTSGESVGTDSRAEQVWLALDEVTDPQNFGALLRSAHFFGATGVVVCSKNSASLTATVSKASAGAMETMTVHSTKNMMRFLKSSRENGWRIIGTAISERSTALEEIEPRAAPTIVVLGNEGYGLRTNVVRECDVLVEIEKFSSP--GATSSTVDSLNVSVTGGVMLFHLL 1839
            +YG++PV+ AL + RRE+  LYVQ+GL    KKDR   D +     E  +T   + K  LN LC NRPHQG VL A PL F  +  +  PEE  D      G  V         W+ALDEV DPQNFGA+LRSA+F GATGVV C++NSA L+A VSKAS+GAME M V+S KNM +FL   R NGWR++G + S  + A  ++  R  PTI V+GNEG GLR NV REC  +V I   +    G     +DSLNVSV  G++L  LL
Sbjct:  561 IYGVSPVVAALGALRREIYGLYVQEGLESKRKKDRRGVDMVMKKADELRLTAETVSKHELNLLCDNRPHQGLVLDASPLQFVDVKEIPPPEEDKDWQHLPDGRVVAP------CWVALDEVMDPQNFGAVLRSAYFLGATGVVTCARNSAPLSAVVSKASSGAMEAMQVYSCKNMFKFLSQCRANGWRVLGASSSPTAVACRDLA-RGVPTIFVVGNEGVGLRENVQRECTEMVRIPGSARTDLGGRPFVIDSLNVSVAAGILLHELL 821          
BLAST of mRNA_C-tenellus_contig1164.1.1 vs. uniprot
Match: A0A087HDZ9_ARAAL (SpoU_sub_bind domain-containing protein n=1 Tax=Arabis alpina TaxID=50452 RepID=A0A087HDZ9_ARAAL)

HSP 1 Score: 219 bits (558), Expect = 1.660e-58
Identity = 133/288 (46.18%), Postives = 171/288 (59.38%), Query Frame = 1
Query: 1045 VYGINPVLNALQSNRREVLMLYVQDGL----NPANKKDRAAADQIHDIVRENDITTTIMDKGYLNTLCGNRPHQGFVLKAKPLTFEPIICLDGPEEGDIAEGTSGESVGTDSRAEQVWLALDEVTDPQNFGALLRSAHFFGATGVVVCSKNSASLTATVSKASAGAMETMTVHSTKNMMRFLKSSRENGWRIIGTAISERSTALEEIEPRAAPTIVVLGNEGYGLRTNVVRECDVLVEIEKFSSPGATSST---------------VDSLNVSVTGGVMLFHLLSGKA 1851
            VYG+NPVL AL   RRE   LYVQ+GL    N   KKD+   +++  I  +  +      K  LN +  NRPHQG VL A PL    +  LD               V ++     +W+ALDEVTDPQN GA++RSA+FFGATG+VVC+KNSA L+A VSKASAG++E M +   KNMM+FL+SS ENGWR++G ++S ++ AL E+ P  +PTI+VLGNEG GLR  V R C  LV I   S P    +T               V+SLNVSV  G+ L HL+  KA
Sbjct:  311 VYGVNPVLAALSVGRREFYALYVQEGLDLSSNNRKKKDKKGFEKVLKISEKLGLNIKETSKHDLNMVADNRPHQGLVLDASPLELVKVKELD--------------PVSSEEEKSSLWVALDEVTDPQNLGAIIRSAYFFGATGIVVCAKNSAPLSAVVSKASAGSLEVMELRYCKNMMQFLESSAENGWRVVGGSVSPKAVALNEVLP-GSPTILVLGNEGTGLRPLVERSCTELVRISG-SMPNDVVATESDDAEGEGLRSFLAVESLNVSVAAGLFLHHLIGNKA 582          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1164.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0N5_ECTSI4.910e-10959.28SpoU_sub_bind domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JJ28_9PHAE1.480e-10759.28SpoU_sub_bind domain-containing protein n=1 Tax=Ec... [more]
A0A835YSW2_9STRA2.250e-8854.49Alpha/beta knot methyltransferase n=1 Tax=Tribonem... [more]
A0A7S2WAK4_9STRA2.270e-6750.55Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S2CGL2_9STRA1.740e-6346.08Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S0PUZ7_9EUKA5.770e-6046.95Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
A9T6G4_PHYPA9.710e-6046.35SpoU_sub_bind domain-containing protein n=1 Tax=Ph... [more]
A0A251TQ88_HELAN3.280e-5946.64Putative rRNA methyltransferase 1 n=4 Tax=Helianth... [more]
A0A388JU39_CHABU4.970e-5948.88SpoU_sub_bind domain-containing protein n=1 Tax=Ch... [more]
A0A087HDZ9_ARAAL1.660e-5846.18SpoU_sub_bind domain-containing protein n=1 Tax=Ar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig1164contigC-tenellus_contig1164:3623..6402 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G0N5
Preferred nameMRM1
PFAMsSpoU_methylase,SpoU_sub_bind
Model size2398
Max annot lvl2759|Eukaryota
KEGG koko:K03218,ko:K15507
Hectar predicted targeting categorysignal peptide
GOsGO:0000154,GO:0000451,GO:0000453,GO:0000959,GO:0000963,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0008989,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0031974,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070039,GO:0071704,GO:0071840,GO:0090304,GO:0140053,GO:0140098,GO:0140102,GO:1901360
Exons3
Evalue1.71e-112
EggNOG OGsCOG0566@1|root,KOG0838@2759|Eukaryota
Ec32 ortholog descriptionAlpha/beta knot methyltransferases
Ec32 orthologEc-14_001660.1
EC2.1.1.185
DescriptionrRNA methyltransferase
Cds size1764
COG categoryJ
BRITEko00000,ko01000,ko03009
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789187.7884316-UTR-C-tenellus_contig1164:3622..37211680789187.7884316-UTR-C-tenellus_contig1164:3622..3721Choristocarpus tenellus KU2346UTRC-tenellus_contig1164 3623..3721 +
1680789187.8296018-UTR-C-tenellus_contig1164:5867..64021680789187.8296018-UTR-C-tenellus_contig1164:5867..6402Choristocarpus tenellus KU2346UTRC-tenellus_contig1164 5868..6402 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789187.800034-CDS-C-tenellus_contig1164:3721..46011680789187.800034-CDS-C-tenellus_contig1164:3721..4601Choristocarpus tenellus KU2346CDSC-tenellus_contig1164 3722..4601 +
1680789187.8104334-CDS-C-tenellus_contig1164:4766..49831680789187.8104334-CDS-C-tenellus_contig1164:4766..4983Choristocarpus tenellus KU2346CDSC-tenellus_contig1164 4767..4983 +
1680789187.820574-CDS-C-tenellus_contig1164:5200..58671680789187.820574-CDS-C-tenellus_contig1164:5200..5867Choristocarpus tenellus KU2346CDSC-tenellus_contig1164 5201..5867 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig1164.1.1prot_C-tenellus_contig1164.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig1164 3722..5867 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig1164.1.1

>prot_C-tenellus_contig1164.1.1 ID=prot_C-tenellus_contig1164.1.1|Name=mRNA_C-tenellus_contig1164.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=588bp
MPIHSCWIQSQGLRLAIAVTALASIVGQGEGLHPMNPLAGCARTMSVRSR
WLTHPRSFVLLISPADIGGGKGHYPGVALGAMGRRRGSSDGEFGQGVRHG
TSGRGRGEGGPSHRRDSYDGRRSSGGRTRRDGIIPSGQGGGFRRGEGSVG
GQSRKGGVYGGRRETFETRRNVDDSGRVHRESSNGRGGRGTYRGERKFVG
SGRSSDGRGRKSGRGGAYAGDVSRFDSGQRAGTLGGARRSSSREWSTEGN
DDHSFKNNMDYDYDSSLSLGDEAEGEEIDPMYKPASGWMKDELSTFQGQS
SAEEQLEEVNSNVDNVYGINPVLNALQSNRREVLMLYVQDGLNPANKKDR
AAADQIHDIVRENDITTTIMDKGYLNTLCGNRPHQGFVLKAKPLTFEPII
CLDGPEEGDIAEGTSGESVGTDSRAEQVWLALDEVTDPQNFGALLRSAHF
FGATGVVVCSKNSASLTATVSKASAGAMETMTVHSTKNMMRFLKSSRENG
WRIIGTAISERSTALEEIEPRAAPTIVVLGNEGYGLRTNVVRECDVLVEI
EKFSSPGATSSTVDSLNVSVTGGVMLFHLLSGKARSP*
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mRNA from alignment at C-tenellus_contig1164:3623..6402+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig1164.1.1 ID=mRNA_C-tenellus_contig1164.1.1|Name=mRNA_C-tenellus_contig1164.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2780bp|location=Sequence derived from alignment at C-tenellus_contig1164:3623..6402+ (Choristocarpus tenellus KU2346)
GTGAGGACCAAGCATGAACATTAATCAACCACATACAGAACATTGACTAC AAGTGGAAGTACGGGGTTGCCGTCCTTGGTGTCCTGGCTGTCGCCGAGCA TGCCTATCCATTCGTGCTGGATTCAATCGCAAGGGTTAAGACTGGCGATT GCAGTGACAGCATTAGCCAGTATCGTGGGGCAAGGGGAAGGACTTCACCC TATGAATCCTCTAGCGGGATGTGCCAGAACTATGTCAGTCCGATCTCGTT GGCTGACACATCCTAGGTCCTTTGTTTTACTGATCTCCCCTGCTGACATT GGTGGAGGAAAAGGACACTATCCTGGTGTCGCGTTGGGAGCCATGGGTCG GAGGCGAGGATCATCTGATGGGGAATTTGGTCAGGGAGTAAGACATGGGA CGAGTGGAAGGGGAAGGGGCGAGGGTGGGCCATCCCACAGACGGGATAGT TATGATGGAAGACGGAGTAGTGGTGGACGTACCCGGAGAGATGGCATCAT TCCCAGTGGCCAAGGTGGAGGTTTCCGGAGAGGGGAAGGTAGTGTTGGTG GTCAAAGTCGGAAGGGGGGGGTCTACGGCGGGAGACGGGAAACATTCGAA ACTCGAAGAAACGTTGATGACAGTGGTCGGGTTCATAGGGAATCATCCAA TGGTCGAGGGGGTAGAGGAACTTACCGGGGCGAGAGGAAGTTCGTCGGCA GTGGTCGTAGTAGTGATGGAAGGGGGAGGAAAAGTGGACGGGGTGGTGCG TATGCGGGAGACGTGTCAAGGTTTGACTCGGGACAGCGCGCTGGTACTCT TGGTGGAGCGCGCCGCTCCTCTTCAAGAGAATGGAGCACTGAAGGCAATG ATGATCATTCCTTCAAAAATAATATGGACTACGATTATGACTCTTCTCTC AGCCTTGGTGACGAGGCCGAGGGAGAAGAGATCGACCCAATGTACAAGCC GGCTTCTGGTTGGATGAAAGATGAGCTTTGTGAGTGTCACTCCTCACTCG CCATTCCTCATCAAATTCTTCAATAATCCATGGCTCAATGGCTATCAAAT ATCCATTTTTCGGACCCTCTTCTCCGATAGGCTGTGAAGCCCGTCACTCA TGCAAACAAATTTTGCCTCACCTGCACTCCCCCCCTGCCACCAGCAACCT TCCAGGGTCAGTCATCGGCAGAGGAACAGTTGGAGGAGGTGAACTCAAAT GTTGACAACGTCTATGGCATCAACCCTGTGCTCAATGCCCTTCAGAGCAA CCGTCGTGAGGTGCTGATGCTGTATGTCCAGGATGGTCTAAACCCAGCCA ACAAGAAGGATAGAGCTGCAGCAGATCAAATACATGACATTGTGCGGGAG AATGATATCACGTAAGCACTCTTGTCCCTGCATACCCTTGTACAGACATT TCTTAAACCTCAGCTAAATTGGAGCCCTTTAATAACTGTTAAGACTGTGC AGTTCTCAGTCAAATGCCCCCCCTCACCCTTCAAGAGGATGAACCCAAGA CATATTTTGTGGGTTGAATTCCTAAATGATGAAGTTTCCTTCTCACAGAG TTATTTTTTGCTTTTTCCCATTTCACAGGACCACGATCATGGACAAGGGC TATCTGAACACCCTCTGTGGTAATAGGCCCCACCAGGGATTTGTTCTCAA AGCAAAACCGCTCACCTTTGAGCCCATCATCTGCCTCGATGGTCCAGAGG AAGGGGATATCGCTGAGGGGACATCAGGGGAAAGTGTGGGAACTGACTCA AGGGCAGAGCAGGTGTGGCTGGCCCTGGATGAGGTGACAGACCCACAAAA CTTTGGTGCGCTGCTCAGGTCTGCTCACTTTTTTGGGGCAACAGGAGTGG TGGTATGCTCAAAAAATTCGGCGTCGCTCACTGCCACGGTAAGCAAGGCA AGTGCAGGAGCAATGGAGACAATGACAGTGCACTCTACCAAAAATATGAT GCGCTTTCTGAAGAGTAGTCGAGAGAATGGTTGGCGCATCATTGGTACAG CCATCAGTGAGCGTTCAACAGCACTTGAGGAAATAGAGCCCCGGGCGGCG CCAACAATAGTTGTCCTTGGTAATGAGGGTTATGGATTGAGGACAAATGT TGTTCGGGAATGTGATGTGTTGGTAGAGATCGAGAAGTTCTCCAGTCCTG GAGCTACTTCATCCACGGTAGACTCGCTCAATGTCAGTGTCACTGGTGGA GTTATGCTCTTCCATCTTTTGTCAGGCAAGGCAAGATCGCCATAGACCTG ACCATTGGGTGTACTGTGGTATCTGCACCTTACGCACCCTTCACAGATCA CCCCCAAAGAGACGGTAAATTCTGTCTCATGTAATGTTGTGGATTGTACT TGGTAGATCCCTAAATGTATCTCACACACTTTTGGGTGTTCATCAATTTC CTTTTATTGATCTATAATGAAAGCATTGTCCAAGAGGGAAATGATACGTA CTTTCTCGTTATAACCTGACCAAGGTACAGATCTCAAAGGGTTACACATT ACTTCATAGCTCTTGAGGATGGAGTTTCACTTGCCTGTGGGAAGATGGTA AATAGTGTAGGTGCAATGATATTTATAATAGTGTGGTGACAAAAGGTTAG GTACTCCTAAGCATCTGCTCTTTTACTTGATGCAAGATTTTAGATTTTGA TTAGCATCAAACTACAGACATTTTCACTTTCTCAATGTGGTTCCAGTTGA AAATAGAGCAACTGCCATCTTGCCGGTGTTCTGCATGGTGCTAGCATGGG GATCACTTTGGCATACCAACTCAAAGTGCG
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Coding sequence (CDS) from alignment at C-tenellus_contig1164:3623..6402+

>mRNA_C-tenellus_contig1164.1.1 ID=mRNA_C-tenellus_contig1164.1.1|Name=mRNA_C-tenellus_contig1164.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1764bp|location=Sequence derived from alignment at C-tenellus_contig1164:3623..6402+ (Choristocarpus tenellus KU2346)
ATGCCTATCCATTCGTGCTGGATTCAATCGCAAGGGTTAAGACTGGCGAT
TGCAGTGACAGCATTAGCCAGTATCGTGGGGCAAGGGGAAGGACTTCACC
CTATGAATCCTCTAGCGGGATGTGCCAGAACTATGTCAGTCCGATCTCGT
TGGCTGACACATCCTAGGTCCTTTGTTTTACTGATCTCCCCTGCTGACAT
TGGTGGAGGAAAAGGACACTATCCTGGTGTCGCGTTGGGAGCCATGGGTC
GGAGGCGAGGATCATCTGATGGGGAATTTGGTCAGGGAGTAAGACATGGG
ACGAGTGGAAGGGGAAGGGGCGAGGGTGGGCCATCCCACAGACGGGATAG
TTATGATGGAAGACGGAGTAGTGGTGGACGTACCCGGAGAGATGGCATCA
TTCCCAGTGGCCAAGGTGGAGGTTTCCGGAGAGGGGAAGGTAGTGTTGGT
GGTCAAAGTCGGAAGGGGGGGGTCTACGGCGGGAGACGGGAAACATTCGA
AACTCGAAGAAACGTTGATGACAGTGGTCGGGTTCATAGGGAATCATCCA
ATGGTCGAGGGGGTAGAGGAACTTACCGGGGCGAGAGGAAGTTCGTCGGC
AGTGGTCGTAGTAGTGATGGAAGGGGGAGGAAAAGTGGACGGGGTGGTGC
GTATGCGGGAGACGTGTCAAGGTTTGACTCGGGACAGCGCGCTGGTACTC
TTGGTGGAGCGCGCCGCTCCTCTTCAAGAGAATGGAGCACTGAAGGCAAT
GATGATCATTCCTTCAAAAATAATATGGACTACGATTATGACTCTTCTCT
CAGCCTTGGTGACGAGGCCGAGGGAGAAGAGATCGACCCAATGTACAAGC
CGGCTTCTGGTTGGATGAAAGATGAGCTTTCAACCTTCCAGGGTCAGTCA
TCGGCAGAGGAACAGTTGGAGGAGGTGAACTCAAATGTTGACAACGTCTA
TGGCATCAACCCTGTGCTCAATGCCCTTCAGAGCAACCGTCGTGAGGTGC
TGATGCTGTATGTCCAGGATGGTCTAAACCCAGCCAACAAGAAGGATAGA
GCTGCAGCAGATCAAATACATGACATTGTGCGGGAGAATGATATCACGAC
CACGATCATGGACAAGGGCTATCTGAACACCCTCTGTGGTAATAGGCCCC
ACCAGGGATTTGTTCTCAAAGCAAAACCGCTCACCTTTGAGCCCATCATC
TGCCTCGATGGTCCAGAGGAAGGGGATATCGCTGAGGGGACATCAGGGGA
AAGTGTGGGAACTGACTCAAGGGCAGAGCAGGTGTGGCTGGCCCTGGATG
AGGTGACAGACCCACAAAACTTTGGTGCGCTGCTCAGGTCTGCTCACTTT
TTTGGGGCAACAGGAGTGGTGGTATGCTCAAAAAATTCGGCGTCGCTCAC
TGCCACGGTAAGCAAGGCAAGTGCAGGAGCAATGGAGACAATGACAGTGC
ACTCTACCAAAAATATGATGCGCTTTCTGAAGAGTAGTCGAGAGAATGGT
TGGCGCATCATTGGTACAGCCATCAGTGAGCGTTCAACAGCACTTGAGGA
AATAGAGCCCCGGGCGGCGCCAACAATAGTTGTCCTTGGTAATGAGGGTT
ATGGATTGAGGACAAATGTTGTTCGGGAATGTGATGTGTTGGTAGAGATC
GAGAAGTTCTCCAGTCCTGGAGCTACTTCATCCACGGTAGACTCGCTCAA
TGTCAGTGTCACTGGTGGAGTTATGCTCTTCCATCTTTTGTCAGGCAAGG
CAAGATCGCCATAG
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