mRNA_C-tenellus_contig1163.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig1163.1.1 vs. uniprot
Match: A0A6H5JJ25_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ25_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 5.440e-16 Identity = 40/78 (51.28%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 31 CSTVLVKCSPTLLTLVIFVVHTKVFGYELTAVSGFTTMAIINQLFLPLFLLPDSMNFCIQGHASIKRLEAFLCSRDGD 264 C V+VK SP ++ V F+VHTK+ GY LTA +GFT +A+ NQL +PL +LPD++N+ IQ S +R+E+FL SR D Sbjct: 621 CFMVVVKASPNVIGTVTFLVHTKLLGYPLTAATGFTALALFNQLRMPLIVLPDTLNYYIQARVSFRRIESFL-SRSAD 697
BLAST of mRNA_C-tenellus_contig1163.1.1 vs. uniprot
Match: D7G0B6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B6_ECTSI) HSP 1 Score: 81.6 bits (200), Expect = 5.460e-16 Identity = 40/78 (51.28%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 31 CSTVLVKCSPTLLTLVIFVVHTKVFGYELTAVSGFTTMAIINQLFLPLFLLPDSMNFCIQGHASIKRLEAFLCSRDGD 264 C V+VK SP ++ V F+VHTK+ GY LTA +GFT +A+ NQL +PL +LPD++N+ IQ S +R+E+FL SR D Sbjct: 598 CFMVVVKASPNVIGTVTFLVHTKLLGYPLTAATGFTALALFNQLRMPLIVLPDTLNYYIQARVSFRRIESFL-SRSAD 674
BLAST of mRNA_C-tenellus_contig1163.1.1 vs. uniprot
Match: A0A835YUJ8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUJ8_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 4.250e-14 Identity = 38/79 (48.10%), Postives = 53/79 (67.09%), Query Frame = 1 Query: 31 CSTVLVKCSPTLLTLVIFVVHTKVFGYELTAVSGFTTMAIINQLFLPLFLLPDSMNFCIQGHASIKRLEAFLCSRDGDM 267 C V VK SPT++ LV F+VHT+ FGY+L+A +GFT +A+ NQL +PL LP ++N IQ S +RL + L S D+ Sbjct: 378 CFMVTVKASPTIVGLVTFLVHTQAFGYKLSAATGFTALALFNQLRMPLAALPSTINEYIQARISFRRLNSLLSSTSSDV 456
BLAST of mRNA_C-tenellus_contig1163.1.1 vs. uniprot
Match: UPI0018D86C14 (ATP-binding cassette sub-family C member 9-like isoform X1 n=3 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D86C14) HSP 1 Score: 61.2 bits (147), Expect = 8.090e-9 Identity = 30/88 (34.09%), Postives = 53/88 (60.23%), Query Frame = 1 Query: 25 YRCSTVLVKCSPTLLTLVIFVVHTKVFGYELTAVSGFTTMAIINQLFLPLFLLPDSMNFCIQGHASIKRLEAFLCSRD----GDMPIH 276 Y S + +P ++TL+ FV+++ G +LT FTT+AIINQ+ LP+ ++P+ NF + H S++R++ F + + D P+H Sbjct: 537 YSLSNFMAFTTPAIVTLLGFVLYSSFTGLQLTPAVAFTTLAIINQMRLPVQMIPEVTNFAVSAHVSVQRIKHFFLAEEIETSEDTPMH 624
BLAST of mRNA_C-tenellus_contig1163.1.1 vs. uniprot
Match: A0A8B7ZL16_ACAPL (ATP-binding cassette sub-family C member 9-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7ZL16_ACAPL) HSP 1 Score: 59.7 bits (143), Expect = 2.810e-8 Identity = 29/78 (37.18%), Postives = 48/78 (61.54%), Query Frame = 1 Query: 25 YRCSTVLVKCSPTLLTLVIFVVHTKVFGYELTAVSGFTTMAIINQLFLPLFLLPDSMNFCIQGHASIKRLEAFLCSRD 258 Y S L +P L+TL+ FV+++ G +LT FTT+AIINQ+ LP+ ++P+ NF + H S+ R++ F + + Sbjct: 364 YSLSNFLSFTTPALVTLLGFVLYSSFTGLQLTPAVAFTTLAIINQMRLPVQMIPEVTNFVVSAHVSVTRIKRFFLAEE 441
BLAST of mRNA_C-tenellus_contig1163.1.1 vs. uniprot
Match: A0A1Y1W3K8_9FUNG (Uncharacterized protein n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1W3K8_9FUNG) HSP 1 Score: 56.2 bits (134), Expect = 4.650e-7 Identity = 27/68 (39.71%), Postives = 41/68 (60.29%), Query Frame = 1 Query: 55 SPTLLTLVIFVVHTKVFGYELTAVSGFTTMAIINQLFLPLFLLPDSMNFCIQGHASIKRLEAFLCSRD 258 +P +TL F V+TKV GY+LTA + FT +A+ L P+ LPD +FC+Q S+ R+ F+ + Sbjct: 379 APVFVTLATFGVYTKVMGYQLTASTAFTALALFKTLRGPIDQLPDFFSFCLQAKVSLDRVAKFMSEEE 446
BLAST of mRNA_C-tenellus_contig1163.1.1 vs. uniprot
Match: A0A8B7ZEI0_ACAPL (LOW QUALITY PROTEIN: ATP-binding cassette sub-family C member 9-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7ZEI0_ACAPL) HSP 1 Score: 54.7 bits (130), Expect = 1.610e-6 Identity = 24/73 (32.88%), Postives = 46/73 (63.01%), Query Frame = 1 Query: 25 YRCSTVLVKCSPTLLTLVIFVVHTKVFGYELTAVSGFTTMAIINQLFLPLFLLPDSMNFCIQGHASIKRLEAF 243 Y S L +P L+TL+ F++++ G +LT FTT++I+NQ+ +P+ ++P + N + H S+K+++ F Sbjct: 129 YSLSNFLSFTTPALVTLLGFILYSSFTGLQLTPAVAFTTLSIVNQMRMPIRMIPRTTNLVVSAHVSVKQIKRF 201
BLAST of mRNA_C-tenellus_contig1163.1.1 vs. uniprot
Match: A0A7D9IVW2_PARCT (ATP-binding cassette sub-family C member 9-like n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IVW2_PARCT) HSP 1 Score: 54.7 bits (130), Expect = 1.620e-6 Identity = 29/74 (39.19%), Postives = 43/74 (58.11%), Query Frame = 1 Query: 25 YRCSTVLVKCSPTLLTLVIFVVHTKVFGYELTAVSGFTTMAIINQLFLPLFLLPDSMNFCIQGHASIKRLEAFL 246 Y + C+ T++ LV+FV + KV G ELTA F ++A+IN + +PLFLLP + + S KRL +L Sbjct: 544 YALGFFITTCTTTIVALVMFVSYVKVSGKELTASKAFASLALINLMKVPLFLLPMMVRTVVNARVSTKRLLPYL 617
BLAST of mRNA_C-tenellus_contig1163.1.1 vs. uniprot
Match: A0A6S7J6V7_PARCT (ATP-binding cassette sub-family C member 9-like (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7J6V7_PARCT) HSP 1 Score: 53.9 bits (128), Expect = 2.760e-6 Identity = 28/65 (43.08%), Postives = 41/65 (63.08%), Query Frame = 1 Query: 52 CSPTLLTLVIFVVHTKVFGYELTAVSGFTTMAIINQLFLPLFLLPDSMNFCIQGHASIKRLEAFL 246 C+ T++ LV+FV + KV G ELTA F ++A+IN + +PLFLLP + + S KRL +L Sbjct: 190 CTTTIVALVMFVSYVKVSGKELTASKAFASLALINLMKVPLFLLPVMVRTVVNARVSTKRLLPYL 254
BLAST of mRNA_C-tenellus_contig1163.1.1 vs. uniprot
Match: A0A7D9HMM8_PARCT (ATP-binding cassette sub-family C member 8-like isoform X3 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HMM8_PARCT) HSP 1 Score: 53.9 bits (128), Expect = 3.000e-6 Identity = 28/65 (43.08%), Postives = 41/65 (63.08%), Query Frame = 1 Query: 52 CSPTLLTLVIFVVHTKVFGYELTAVSGFTTMAIINQLFLPLFLLPDSMNFCIQGHASIKRLEAFL 246 C+ T++ LV+FV + KV G ELTA F ++A+IN + +PLFLLP + + S KRL +L Sbjct: 553 CTTTIVALVMFVSYVKVSGKELTASKAFASLALINLMRVPLFLLPMMVRTVVNARVSTKRLLPYL 617 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1163.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1163.1.1 >prot_C-tenellus_contig1163.1.1 ID=prot_C-tenellus_contig1163.1.1|Name=mRNA_C-tenellus_contig1163.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=97bp MNILVVNNYRCSTVLVKCSPTLLTLVIFVVHTKVFGYELTAVSGFTTMAIback to top mRNA from alignment at C-tenellus_contig1163:602..7566+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig1163.1.1 ID=mRNA_C-tenellus_contig1163.1.1|Name=mRNA_C-tenellus_contig1163.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=6965bp|location=Sequence derived from alignment at C-tenellus_contig1163:602..7566+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig1163:602..7566+ >mRNA_C-tenellus_contig1163.1.1 ID=mRNA_C-tenellus_contig1163.1.1|Name=mRNA_C-tenellus_contig1163.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=291bp|location=Sequence derived from alignment at C-tenellus_contig1163:602..7566+ (Choristocarpus tenellus KU2346)back to top |