mRNA_C-tenellus_contig11615.1.2 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig11615.1.2
Unique NamemRNA_C-tenellus_contig11615.1.2
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
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BLAST of mRNA_C-tenellus_contig11615.1.2 vs. uniprot
Match: D7FQ23_ECTSI (Superoxide dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ23_ECTSI)

HSP 1 Score: 251 bits (642), Expect = 1.840e-78
Identity = 136/219 (62.10%), Postives = 161/219 (73.52%), Query Frame = 1 
Query:   43 RGFSSTASARVSAVTLPDLSYDYGDLEPAITGEIMKIHHTKHHQTYVNNLNVAMEKLGDAEAKGDVTAIIQLQGAIKFNGGGHLNHSIFWQNLAPIGKGGGEMVPGKLQDMITAQYSSLDELKGKLSAVTVGVQGSGWGWLGYDKTADRLAIATCANQVRLKGIREEYFTLMLSVCVG*LF-Q*LNVSPKKVQIMY*ENMYEQFIGFANILGQKLRATN 696
            R  SS+A+AR  AV LPDL+YDYG+LEPAI+GEIMKIHHTKHHQ Y+NNLN AMEKL DAEAKGDVTAI+QLQ AIKFNGGGHLNHSIFW+NLAP+GKGGGEMV G L DMI AQY S+ EL  K+SA +VGVQGSGWGWLGYDK   RLAIATCANQ  L+        L + V     + Q  NV P  V+ ++      + + +A++  +   AT+
Sbjct:   19 RMISSSAAARAPAV-LPDLTYDYGELEPAISGEIMKIHHTKHHQAYINNLNAAMEKLADAEAKGDVTAILQLQAAIKFNGGGHLNHSIFWKNLAPVGKGGGEMVTGTLADMIEAQYHSMGELTEKMSAASVGVQGSGWGWLGYDKVNKRLAIATCANQDPLEATTGLVPLLGIDVWEHAYYLQYKNVRPDYVKSIF------KVVNWADVQERLTAATS 230
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BLAST of mRNA_C-tenellus_contig11615.1.2 vs. uniprot
Match: A0A7S2D386_9STRA (Superoxide dismutase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D386_9STRA)

HSP 1 Score: 219 bits (557), Expect = 1.040e-65
Identity = 107/163 (65.64%), Postives = 127/163 (77.91%), Query Frame = 1 
Query:   43 RGFSSTASARVSAVTLPDLSYDYGDLEPAITGEIMKIHHTKHHQTYVNNLNVAMEKLGDAEAKGDVTAIIQLQGAIKFNGGGHLNHSIFWQNLAPIGKGGGEMVPGKLQDMITAQYSSLDELKGKLSAVTVGVQGSGWGWLGYDKTADRLAIATCANQVRLKG 531
            RG S + SA  S  TLPDL Y YG+LEP ITGEIM+IHH+KHH TYV NLN+A EKL  AEA GDVTA++QLQGAIKFNGGGHLNHSIFW+NLAP  KGGG +  G+L  +I A++ S D +K K++A TV VQGSGWGWLGYDKT+  +A+A CANQ  L+ 
Sbjct:   19 RGISRSVSASRSIFTLPDLKYGYGELEPVITGEIMEIHHSKHHNTYVTNLNIASEKLAAAEAAGDVTAMVQLQGAIKFNGGGHLNHSIFWENLAPPSKGGGGVPEGELAALIDAKFGSFDAMKEKMTAATVAVQGSGWGWLGYDKTSGSVAVACCANQDPLEA 181
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BLAST of mRNA_C-tenellus_contig11615.1.2 vs. uniprot
Match: A0A7S4M2S9_9EUKA (Superoxide dismutase n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4M2S9_9EUKA)

HSP 1 Score: 215 bits (547), Expect = 3.450e-64
Identity = 103/158 (65.19%), Postives = 124/158 (78.48%), Query Frame = 1 
Query:   43 RGFSSTASARVSAVTLPDLSYDYGDLEPAITGEIMKIHHTKHHQTYVNNLNVAMEKLGDAEAKGDVTAIIQLQGAIKFNGGGHLNHSIFWQNLAPIGKGGGEMVPGKLQDMITAQYSSLDELKGKLSAVTVGVQGSGWGWLGYDKTADRLAIATCANQ 516
            R FS+  S   ++ TLPDL+YDYG LEPA++GEIM IHHTKHHQTYV NLN A EK+ DA+AKGD+ A+I LQGAIKFNGGGH+NHSIFWQNL PI +GGG +  G L   ITA++ SL+  + K +A T  +QGSGWGWLGYDK AD++ IATCANQ
Sbjct:   24 RAFSAVPS---TSFTLPDLTYDYGALEPAVSGEIMTIHHTKHHQTYVTNLNAAYEKMLDAQAKGDIDAVIALQGAIKFNGGGHVNHSIFWQNLCPISEGGGVLQDGPLSAAITAEFGSLEAFQAKFNATTAAIQGSGWGWLGYDKAADKIKIATCANQ 178
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BLAST of mRNA_C-tenellus_contig11615.1.2 vs. uniprot
Match: A0A835YN63_9STRA (Superoxide dismutase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN63_9STRA)

HSP 1 Score: 212 bits (539), Expect = 5.070e-63
Identity = 113/188 (60.11%), Postives = 132/188 (70.21%), Query Frame = 1 
Query:   67 ARVSAVTLPDLSYDYGDLEPAITGEIMKIHHTKHHQTYVNNLNVAMEKLGDAEAKGDVTAIIQLQGAIKFNGGGHLNHSIFWQNLAPIGKGGGEMVPGKLQDMITAQYSSLDELKGKLSAVTVGVQGSGWGWLGYDKTADRLAIATCANQVRLKGIREEYFTLMLSVCVG*LF-Q*LNVSPKKVQIMY 627
            A  S  TLP+L Y Y DLEP I G+IM+IHH+KHH TYV NLN AM KL DAEAKGDV AI+QLQGAIKFNGGGH+NHSIFW+NLAP   GGG++  G L+D I +Q+ SLD LK KLSA  VGVQGSGWGWL YDK A +LAIAT ANQ  L+        L + V     + Q  NV P  V+ ++
Sbjct:   26 ALASQATLPELGYGYKDLEPYIDGQIMEIHHSKHHNTYVTNLNAAMTKLADAEAKGDVGAIVQLQGAIKFNGGGHINHSIFWKNLAPTSAGGGKLECGSLKDAIDSQFGSLDGLKEKLSAAAVGVQGSGWGWLAYDKVACKLAIATTANQDPLEPTTGMVPLLGIDVWEHAYYLQYKNVRPSYVKEIF 213
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BLAST of mRNA_C-tenellus_contig11615.1.2 vs. uniprot
Match: A0A7S3EZA5_9EUKA (Superoxide dismutase n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3EZA5_9EUKA)

HSP 1 Score: 208 bits (529), Expect = 1.440e-61
Identity = 101/159 (63.52%), Postives = 121/159 (76.10%), Query Frame = 1 
Query:   40 LRGFSSTASARVSAVTLPDLSYDYGDLEPAITGEIMKIHHTKHHQTYVNNLNVAMEKLGDAEAKGDVTAIIQLQGAIKFNGGGHLNHSIFWQNLAPIGKGGGEMVPGKLQDMITAQYSSLDELKGKLSAVTVGVQGSGWGWLGYDKTADRLAIATCANQ 516
            LR FSS  S    + TLPDL YDY  LEP ++GEIM IHHTKHHQTYV NLN A EKL DA+AKGD+ A I LQGAIKFNGGGH+NHSIFWQNL P+  GGG++  G L++ I A++ SL+ L+ K +A T  +QGSGWGWLG+DK A ++ IATCANQ
Sbjct:   18 LRCFSSAPSV---SFTLPDLPYDYAALEPVVSGEIMTIHHTKHHQTYVTNLNAAYEKLLDAQAKGDIDAAIALQGAIKFNGGGHVNHSIFWQNLCPVSMGGGQLQDGPLKEAIMAEFGSLEALQAKFNATTAAIQGSGWGWLGFDKAAGKIKIATCANQ 173
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BLAST of mRNA_C-tenellus_contig11615.1.2 vs. uniprot
Match: A0A7S2SP93_9STRA (Superoxide dismutase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SP93_9STRA)

HSP 1 Score: 206 bits (524), Expect = 8.000e-61
Identity = 101/170 (59.41%), Postives = 125/170 (73.53%), Query Frame = 1 
Query:   22 ATSRGPLRGFSSTASARVSAVTLPDLSYDYGDLEPAITGEIMKIHHTKHHQTYVNNLNVAMEKLGDAEAKGDVTAIIQLQGAIKFNGGGHLNHSIFWQNLAPIGKGGGEMVPGKLQDMITAQYSSLDELKGKLSAVTVGVQGSGWGWLGYDKTADRLAIATCANQVRLKG 531
            A S  P+   +ST ++  S  TLPDLSY YG+LEP I+GEIM++HH+KHH TYV NLN  ME+L +AE KGDVT I+QLQ AIKFNGGGHLNHSIFW+NLAP  KGGG    G+L  +I  ++ S D +K K++A TV VQGSGWGWLGYDK +D +A+  C NQ  L+ 
Sbjct:    8 ARSFAPVASRASTTASSRSVFTLPDLSYGYGELEPVISGEIMELHHSKHHNTYVTNLNAGMEQLAEAEHKGDVTKIVQLQQAIKFNGGGHLNHSIFWENLAPPSKGGGGEPTGELAALIDKKFGSFDAMKDKMTAATVAVQGSGWGWLGYDKASDSVAVTCCFNQDPLEA 177
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BLAST of mRNA_C-tenellus_contig11615.1.2 vs. uniprot
Match: F0YBC5_AURAN (Superoxide dismutase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YBC5_AURAN)

HSP 1 Score: 199 bits (507), Expect = 2.340e-58
Identity = 97/149 (65.10%), Postives = 114/149 (76.51%), Query Frame = 1 
Query:   85 TLPDLSYDYGDLEPAITGEIMKIHHTKHHQTYVNNLNVAMEKLGDAEAKGDVTAIIQLQGAIKFNGGGHLNHSIFWQNLAPIGKGGGEMVPGKLQDMITAQYSSLDELKGKLSAVTVGVQGSGWGWLGYDKTADRLAIATCANQVRLKG 531
            TLP LSYDYG LEP I+G+IM+IHH+KHH TYV NLN A+E L  A A GDVTAI+  QGAIKFNGGGHLNHSIFW+NLAP  +GGG    G L   I A++  +D +K KLSA+TVGVQGSGWGWLGY+K   +LA+ATC NQ  L+ 
Sbjct:   24 TLPALSYDYGALEPVISGQIMEIHHSKHHNTYVTNLNAAVETLEQATAAGDVTAIVAAQGAIKFNGGGHLNHSIFWENLAPPSEGGGAPPTGALAAAIDAEFGGVDAMKTKLSAMTVGVQGSGWGWLGYNKATGKLALATCPNQDPLEA 172
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BLAST of mRNA_C-tenellus_contig11615.1.2 vs. uniprot
Match: A0A6A4V3L1_AMPAM (Superoxide dismutase n=4 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4V3L1_AMPAM)

HSP 1 Score: 197 bits (500), Expect = 2.750e-57
Identity = 106/184 (57.61%), Postives = 123/184 (66.85%), Query Frame = 1 
Query:   79 AVTLPDLSYDYGDLEPAITGEIMKIHHTKHHQTYVNNLNVAMEKLGDAEAKGDVTAIIQLQGAIKFNGGGHLNHSIFWQNLAPIGKGGGEMVPGKLQDMITAQYSSLDELKGKLSAVTVGVQGSGWGWLGYDKTADRLAIATCANQVRLKGIREEYFTLMLSVCVG*LF-Q*LNVSPKKVQIMY 627
            A TLPDL YDYG LEP I+ EIM++HH+KHHQTYVNNLNVA EKL +A AK D + II LQGA+KFNGGGH+NHSIFWQNL P G G  E   G+L   I   + S + LK +LSA TV VQGSGWGWLGYDK A RL +ATCANQ  L+          + V     + Q  NV P  V  +Y
Sbjct:   27 AHTLPDLPYDYGALEPVISAEIMQLHHSKHHQTYVNNLNVAEEKLAEAVAKNDTSTIISLQGALKFNGGGHINHSIFWQNLCPGGSGEPE---GELLAAIQRDFGSFEALKQRLSAATVAVQGSGWGWLGYDKEAGRLRVATCANQDPLQATTGLVPLFGIDVWEHAYYLQYKNVRPDYVNAIY 207
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BLAST of mRNA_C-tenellus_contig11615.1.2 vs. uniprot
Match: A0A812QTX9_SYMMI (Superoxide dismutase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812QTX9_SYMMI)

HSP 1 Score: 192 bits (488), Expect = 6.960e-56
Identity = 89/129 (68.99%), Postives = 108/129 (83.72%), Query Frame = 1 
Query:  145 MKIHHTKHHQTYVNNLNVAMEKLGDAEAKGDVTAIIQLQGAIKFNGGGHLNHSIFWQNLAPIGKGGGEMVPGKLQDMITAQYSSLDELKGKLSAVTVGVQGSGWGWLGYDKTADRLAIATCANQVRLKG 531
            M+IH+TKHH TYV NLNVA EKLGDA+AKGD+  +I LQ A+KFNGGGHLNHSIFW+NLAP+G+GGGEMV G L++MI +Q+ SLD LK  +SA T+ +QGSGWGWLGYDKTA +L +ATCANQ  L+ 
Sbjct:    1 MEIHYTKHHNTYVTNLNVAHEKLGDAQAKGDINTVIALQPALKFNGGGHLNHSIFWENLAPVGQGGGEMVSGDLENMINSQFGSLDGLKKTMSASTIAIQGSGWGWLGYDKTAGQLKVATCANQDPLEA 129
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BLAST of mRNA_C-tenellus_contig11615.1.2 vs. uniprot
Match: C1C1F0_CALCM (Superoxide dismutase n=1 Tax=Caligus clemensi TaxID=344056 RepID=C1C1F0_CALCM)

HSP 1 Score: 193 bits (490), Expect = 7.940e-56
Identity = 99/149 (66.44%), Postives = 111/149 (74.50%), Query Frame = 1 
Query:   85 TLPDLSYDYGDLEPAITGEIMKIHHTKHHQTYVNNLNVAMEKLGDAEAKGDVTAIIQLQGAIKFNGGGHLNHSIFWQNLAPIGKGGGEMVPGKLQDMITAQYSSLDELKGKLSAVTVGVQGSGWGWLGYDKTADRLAIATCANQVRLKG 531
            TLPDL Y YG LEP I+GEIM+IHH+KHHQTYVNNLN A EKL DA AK DV+ II LQGA+KFNGGGHLNHSIFW NLAP G   GE   G+L  +I   + SL+ +K KLS  TV VQGSGWGWLGY K   +L IATCANQ  L+ 
Sbjct:   25 TLPDLPYAYGALEPVISGEIMEIHHSKHHQTYVNNLNGAEEKLADAVAKNDVSTIISLQGALKFNGGGHLNHSIFWTNLAPAGSCSGEP-SGELLKLIQRDFGSLEAMKEKLSGSTVAVQGSGWGWLGYCKAEKKLKIATCANQDPLEA 172
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11615.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ23_ECTSI1.840e-7862.10Superoxide dismutase n=1 Tax=Ectocarpus siliculosu... [more]
A0A7S2D386_9STRA1.040e-6565.64Superoxide dismutase n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S4M2S9_9EUKA3.450e-6465.19Superoxide dismutase n=1 Tax=Prymnesium polylepis ... [more]
A0A835YN63_9STRA5.070e-6360.11Superoxide dismutase n=1 Tax=Tribonema minus TaxID... [more]
A0A7S3EZA5_9EUKA1.440e-6163.52Superoxide dismutase n=1 Tax=Haptolina ericina Tax... [more]
A0A7S2SP93_9STRA8.000e-6159.41Superoxide dismutase n=1 Tax=Rhizochromulina marin... [more]
F0YBC5_AURAN2.340e-5865.10Superoxide dismutase n=1 Tax=Aureococcus anophagef... [more]
A0A6A4V3L1_AMPAM2.750e-5757.61Superoxide dismutase n=4 Tax=Amphibalanus amphitri... [more]
A0A812QTX9_SYMMI6.960e-5668.99Superoxide dismutase n=1 Tax=Symbiodinium microadr... [more]
C1C1F0_CALCM7.940e-5666.44Superoxide dismutase n=1 Tax=Caligus clemensi TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig11615contigC-tenellus_contig11615:8..2285 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FQ23
Preferred nameSOD2
PFAMsSod_Fe_C,Sod_Fe_N
Model size1284
Max annot lvl2759|Eukaryota
KEGG koko:K04564
KEGG Pathwayko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000302,GO:0000303,GO:0000305,GO:0001101,GO:0001306,GO:0001315,GO:0001505,GO:0001666,GO:0001836,GO:0001889,GO:0001976,GO:0002237,GO:0002376,GO:0002520,GO:0002682,GO:0003006,GO:0003007,GO:0003008,GO:0003013,GO:0003018,GO:0003032,GO:0003044,GO:0003068,GO:0003069,GO:0003070,GO:0003073,GO:0003085,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004784,GO:0005488,GO:0005507,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0006091,GO:0006355,GO:0006357,GO:0006518,GO:0006575,GO:0006749,GO:0006790,GO:0006801,GO:0006807,GO:0006915,GO:0006950,GO:0006952,GO:0006970,GO:0006974,GO:0006979,GO:0006996,GO:0007005,GO:0007154,GO:0007165,GO:0007166,GO:0007267,GO:0007275,GO:0007399,GO:0007507,GO:0007568,GO:0007571,GO:0007584,GO:0007610,GO:0007626,GO:0008015,GO:0008144,GO:0008150,GO:0008152,GO:0008217,GO:0008219,GO:0008285,GO:0008340,GO:0008630,GO:0008631,GO:0008637,GO:0009058,GO:0009266,GO:0009295,GO:0009314,GO:0009409,GO:0009410,GO:0009593,GO:0009605,GO:0009607,GO:0009611,GO:0009617,GO:0009628,GO:0009635,GO:0009636,GO:0009651,GO:0009653,GO:0009719,GO:0009725,GO:0009737,GO:0009743,GO:0009790,GO:0009791,GO:0009793,GO:0009838,GO:0009887,GO:0009889,GO:0009891,GO:0009893,GO:0009894,GO:0009908,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010042,GO:0010043,GO:0010154,GO:0010212,GO:0010227,GO:0010259,GO:0010269,GO:0010332,GO:0010468,GO:0010506,GO:0010556,GO:0010646,GO:0010648,GO:0010660,GO:0010661,GO:0010821,GO:0010941,GO:0010942,GO:0012501,GO:0014823,GO:0015980,GO:0016020,GO:0016043,GO:0016209,GO:0016491,GO:0016721,GO:0016999,GO:0017000,GO:0017144,GO:0019219,GO:0019221,GO:0019222,GO:0019430,GO:0019825,GO:0019866,GO:0019899,GO:0022008,GO:0022414,GO:0022607,GO:0022900,GO:0022904,GO:0023051,GO:0023052,GO:0023057,GO:0030097,GO:0030145,GO:0030154,GO:0030182,GO:0030334,GO:0030335,GO:0031090,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031667,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032364,GO:0032496,GO:0032501,GO:0032502,GO:0032879,GO:0032991,GO:0033043,GO:0033273,GO:0033483,GO:0033554,GO:0033591,GO:0033993,GO:0034021,GO:0034097,GO:0034284,GO:0034391,GO:0034393,GO:0034599,GO:0034614,GO:0034641,GO:0035150,GO:0035206,GO:0035296,GO:0035556,GO:0035690,GO:0035722,GO:0035900,GO:0035902,GO:0036094,GO:0036293,GO:0036296,GO:0036473,GO:0038001,GO:0040012,GO:0040017,GO:0042127,GO:0042221,GO:0042311,GO:0042391,GO:0042493,GO:0042542,GO:0042554,GO:0042592,GO:0042645,GO:0042742,GO:0042743,GO:0042802,GO:0042803,GO:0042981,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043167,GO:0043169,GO:0043207,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043473,GO:0043523,GO:0043524,GO:0043603,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045333,GO:0045428,GO:0045429,GO:0045471,GO:0045595,GO:0045596,GO:0045597,GO:0045598,GO:0045599,GO:0045776,GO:0046677,GO:0046686,GO:0046872,GO:0046914,GO:0046983,GO:0048066,GO:0048145,GO:0048147,GO:0048316,GO:0048367,GO:0048437,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048583,GO:0048585,GO:0048608,GO:0048660,GO:0048662,GO:0048666,GO:0048678,GO:0048699,GO:0048731,GO:0048732,GO:0048773,GO:0048856,GO:0048869,GO:0048878,GO:0050665,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050801,GO:0050877,GO:0050880,GO:0050896,GO:0050931,GO:0051093,GO:0051094,GO:0051128,GO:0051147,GO:0051149,GO:0051150,GO:0051152,GO:0051171,GO:0051173,GO:0051186,GO:0051188,GO:0051239,GO:0051240,GO:0051252,GO:0051259,GO:0051260,GO:0051262,GO:0051270,GO:0051272,GO:0051289,GO:0051602,GO:0051606,GO:0051704,GO:0051707,GO:0051716,GO:0051881,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055093,GO:0055114,GO:0060255,GO:0060548,GO:0061008,GO:0061458,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070482,GO:0070671,GO:0070887,GO:0071000,GO:0071236,GO:0071310,GO:0071345,GO:0071349,GO:0071361,GO:0071450,GO:0071451,GO:0071704,GO:0071840,GO:0072359,GO:0072593,GO:0080090,GO:0080134,GO:0080135,GO:0090066,GO:0090567,GO:0097159,GO:0097190,GO:0097193,GO:0097237,GO:0097249,GO:0097305,GO:0097306,GO:0097746,GO:0097755,GO:0098542,GO:0098754,GO:0098771,GO:0098796,GO:0098798,GO:0098800,GO:0098869,GO:0099402,GO:1900239,GO:1900241,GO:1900407,GO:1900408,GO:1901214,GO:1901215,GO:1901342,GO:1901363,GO:1901564,GO:1901700,GO:1901701,GO:1902175,GO:1902176,GO:1902531,GO:1902532,GO:1902882,GO:1902883,GO:1903146,GO:1903201,GO:1903202,GO:1903409,GO:1903426,GO:1903428,GO:1903506,GO:1904018,GO:1904407,GO:1904705,GO:1904706,GO:1905063,GO:1905065,GO:1905459,GO:1905461,GO:1905915,GO:1905917,GO:1905930,GO:1905932,GO:1990748,GO:2000026,GO:2000112,GO:2000145,GO:2000147,GO:2000377,GO:2000379,GO:2001141,GO:2001233,GO:2001234,GO:2001242,GO:2001243
Exons3
Evalue3.56e-67
EggNOG OGsCOG0605@1|root,KOG0876@2759|Eukaryota
Ec32 ortholog descriptionSuperoxide dismutase
Ec32 orthologEc-01_007760.1
EC1.15.1.1
Descriptionoxidoreductase activity, acting on superoxide radicals as acceptor
Cds size435
COG categoryP
BRITEko00000,ko00001,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789186.6474645-UTR-C-tenellus_contig11615:7..7121680789186.6474645-UTR-C-tenellus_contig11615:7..712Choristocarpus tenellus KU2346UTRC-tenellus_contig11615 8..712 -
1680789186.687922-UTR-C-tenellus_contig11615:2141..22851680789186.687922-UTR-C-tenellus_contig11615:2141..2285Choristocarpus tenellus KU2346UTRC-tenellus_contig11615 2142..2285 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789186.6606092-CDS-C-tenellus_contig11615:712..9761680789186.6606092-CDS-C-tenellus_contig11615:712..976Choristocarpus tenellus KU2346CDSC-tenellus_contig11615 713..976 -
1680789186.6717436-CDS-C-tenellus_contig11615:1707..18481680789186.6717436-CDS-C-tenellus_contig11615:1707..1848Choristocarpus tenellus KU2346CDSC-tenellus_contig11615 1708..1848 -
1680789186.6798522-CDS-C-tenellus_contig11615:2111..21411680789186.6798522-CDS-C-tenellus_contig11615:2111..2141Choristocarpus tenellus KU2346CDSC-tenellus_contig11615 2112..2141 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig11615.1.2prot_C-tenellus_contig11615.1.2Choristocarpus tenellus KU2346polypeptideC-tenellus_contig11615 713..2141 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig11615.1.2

>prot_C-tenellus_contig11615.1.2 ID=prot_C-tenellus_contig11615.1.2|Name=mRNA_C-tenellus_contig11615.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=145bp
MKIHHTKHHQTYVNNLNVAMEKLGDAEAKGDVTAIIQLQGAIKFNGGGHL
NHSIFWQNLAPIGKGGGEMVPGKLQDMITAQYSSLDELKGKLSAVTVGVQ
GSGWGWLGYDKTADRLAIATCANQVRLKGIREEYFTLMLSVCVG*
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mRNA from alignment at C-tenellus_contig11615:8..2285-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig11615.1.2 ID=mRNA_C-tenellus_contig11615.1.2|Name=mRNA_C-tenellus_contig11615.1.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2278bp|location=Sequence derived from alignment at C-tenellus_contig11615:8..2285- (Choristocarpus tenellus KU2346)
TCATGCTCAAGGTTTGCATCTGCTACCTCTAGGGGTCCTCTTCGTGGCTT
CTCTTCGACGGCCTCTGCCCGGGTTTCTGCGGTGACTCTTCCTGACCTTT
CCTATGATTATGGTGATCTCGAACCAGCTATTACCGGGGAGATCATGAAG
ATTCACCACACCAAACATCATCAGGTGGGGTCAAGGTGAAGAAACGAACG
TCCACTTGCGGACATGGATAAAGATAGAAATAGCAATGCTTAGTTGCGAA
TTTTGCAACTGATGAGGACTGAATTTACCATGTCATCACTTTCGTCGAGA
ATATTCCTACAACCTCTAGGTCTGATAACGAAGGAAGAACTTTTACTGTG
TCCATCCTCCTCCTACACACACTAATAGTAACATAGTCCCCTCTCTTAAC
TCTACATCCCCTCTCTTACCTCTATCTGGGGGTGCAGACATATGTCAACA
ACCTAAATGTGGCAATGGAAAAGCTGGGAGATGCAGAGGCCAAGGGTGAT
GTGACAGCTATCATACAGTTGCAGGGTGCCATAAAATTCAACGGGGGAGG
TCATCTCAACCACTCCATTTTCTGGCAGGTGTGTTCTTAGCCGGGGAAGG
GATCAAACTCTGTCAGACTTCATCAAATCCCCCCTCCATTTGTTGACGTC
GATCAATCGAGAGATATCGAGTGCATTCCTGGTAGAGAGCAGCCGTGCTT
GTCACGCAGCTTCCCTCACCCCTGCCCTCCCCTTCCCTCTTATCTCCTTG
TTCTCAGATTAATAAGTGATGACTTGCAGTTGTGTATTTATTGCTTGCAT
GGCCTCTAACATCGCCTCATGTCAAGGTGTGTGTGTAATAAATATGCTTC
AGGTATTATTCCAGCTGTCTCATATGTGTTGCACTTTCTCAACATGCAGT
ATACACTTTGCCTTCACCTCTCCTTCCTCCTCACTCTTCACTTTTAGTTA
TCCTGGAGAGTCATCTATCTTGCAGGGACATCGAAGGCTTGAGACACTTT
GACCATGTCACCACACAGAGGAAAATCAACCTATTCCACAATGAGAGCAC
CCTCAATATTAGCTAGCAGTCAGTGCAACAGCTGCATTTCTTTTTTAGTA
GGATTCTACTCTTTTTTTGTGTTTCTTTCCCTCTTATTCCACCATTTTCC
ACTTGGTTGTTAGGGTAATGCAACGCCGCCATCATGCTGAACTTTTGTGA
ATTCAATTGTAATAAATGGCACTTTGAAGTACAACAATGTATGCACTCCC
CCTTTCCTTCCCCTCCCCCTCCCCCTCCCTTTACTCTCCTCCTCTCAATG
CCTGCTCAGAATCTGGCCCCGATTGGGAAGGGTGGAGGAGAGATGGTGCC
AGGAAAGTTGCAGGATATGATTACTGCTCAGTATAGTTCTCTGGATGAGC
TAAAGGGAAAGCTTTCAGCTGTCACGGTTGGAGTGCAGGGCTCTGGTTGG
GGCTGGTTGGGCTATGACAAGACTGCCGATCGGTTAGCGATTGCCACTTG
TGCTAACCAGGTAAGGTTGAAGGGAATAAGAGAGGAATATTTCACGCTTA
TGCTTTCAGTATGTGTGGGTTGATTGTTTCAATAATTGAATGTGTCACCT
AAAAAGGTACAAATTATGTATTAAGAAAATATGTATGAGCAATTTATTGG
TTTTGCTAACATTTTAGGACAAAAACTGCGAGCAACAAATATATTTTGTC
TTTTTCTTGGACTTGAGAGAGTTGAGTTGATGTTATATTAATTCCTTTGT
CGCCTGAATCATTACCACTATATTTTAAAAATATGTATGGGCTAGGGTTC
GTGTTATTCAACTCACATCTCTTATTCAACTCACACCTCTTGTAATGTTG
TAATTACCCTGAGCTTTGTATATTTTCTTCTCTTGCTTTGACTGCCTGGA
TCATATATATTCATCTATACATCTATACATATATATGTGTTTGTGTATAC
CCCTGAGCAGCTTCTGTATGTGTCTTGATATAGGCTCATTTATCTTACGG
AAACCTTATTTAGAACAGAGTATGGTCCACCTGTGGTAATTATTTGCTTC
AGTAGTAGGCTCAAATGAAGCAACCTGTGGAGACCAGTCTGCATATCTGT
TCATTCAAGTCTGTTGAAGTGAAGAGTTGAGAGAAGTGGAATGACCAAAT
TTTGTAGGAGTGTTATTCTGAGAGTGTGAAGAGAGATGTTTGGAATTCCG
ATTTTTCAGTTGTATTCAAAGTTCATTTGTTGGTAATTTTTTATATTATA
TGGTTGTGATGCCAGAGTCAAAGTATCT
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Coding sequence (CDS) from alignment at C-tenellus_contig11615:8..2285-

>mRNA_C-tenellus_contig11615.1.2 ID=mRNA_C-tenellus_contig11615.1.2|Name=mRNA_C-tenellus_contig11615.1.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=435bp|location=Sequence derived from alignment at C-tenellus_contig11615:8..2285- (Choristocarpus tenellus KU2346)
ATGAAGATTCACCACACCAAACATCATCAGACATATGTCAACAACCTAAA
TGTGGCAATGGAAAAGCTGGGAGATGCAGAGGCCAAGGGTGATGTGACAG
CTATCATACAGTTGCAGGGTGCCATAAAATTCAACGGGGGAGGTCATCTC
AACCACTCCATTTTCTGGCAGAATCTGGCCCCGATTGGGAAGGGTGGAGG
AGAGATGGTGCCAGGAAAGTTGCAGGATATGATTACTGCTCAGTATAGTT
CTCTGGATGAGCTAAAGGGAAAGCTTTCAGCTGTCACGGTTGGAGTGCAG
GGCTCTGGTTGGGGCTGGTTGGGCTATGACAAGACTGCCGATCGGTTAGC
GATTGCCACTTGTGCTAACCAGGTAAGGTTGAAGGGAATAAGAGAGGAAT
ATTTCACGCTTATGCTTTCAGTATGTGTGGGTTGA
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