mRNA_C-tenellus_contig11611.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig11611.1.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 137 bits (344), Expect = 1.260e-36 Identity = 68/148 (45.95%), Postives = 84/148 (56.76%), Query Frame = 1 Query: 1 HIPKTMIIAANAHPDSTHSFDGKLGVWRVCAPKTADRISKNHKEG-----------------------DLYEQDCTLDHLWHRKW*TE-LLPAIKSKMSWLQGKRIVIQQDSAILHTGKGNSEILSGTGKTEGGSIRLVMQPCNSPDL 372 H+PK M+I ANA PD H FDGK+G+WR+C +TA R SK + YE DCT+D W++ W + LLPAIK KM WL+ KR+V+QQD A HTGKGN EIL+ G G + LV QP SPDL Sbjct: 190 HLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDL 337
BLAST of mRNA_C-tenellus_contig11611.1.1 vs. uniprot
Match: A0A6G0WM27_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WM27_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 4.710e-12 Identity = 46/128 (35.94%), Postives = 69/128 (53.91%), Query Frame = 1 Query: 4 IPKTMIIAANAHP---DSTHSF-DGKLGVWRVCAPKTADRISKNHKEGDLYEQDCTL-DHLWHRKW*TELLPAIKSKMSWLQGKRIVIQQDSAILHTGKGNSEILSGTGKTEGGSIRLVMQPCNSPDL 372 I K M +AA A P ++T+ F DGKLG+W + A R SKN L ++ ++ + +LPAIK KMS+++ +I IQQD+A H+ K + + G +G ++ L QP NSPD Sbjct: 214 ITKVMFLAAVARPRHDEATNQFFDGKLGMWPFVIQEPAKRTSKNRARDTLISTPISVTSEVYFDMLVSNVLPAIKRKMSFMKNSKIFIQQDNAGPHS-KSVNHRFNQVGSYDGWNVALKNQPANSPDF 340
BLAST of mRNA_C-tenellus_contig11611.1.1 vs. uniprot
Match: A0A090N4M5_OSTTA (Transposase, Tc1-like n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090N4M5_OSTTA) HSP 1 Score: 63.2 bits (152), Expect = 4.070e-9 Identity = 44/130 (33.85%), Postives = 66/130 (50.77%), Query Frame = 1 Query: 4 IPKTMIIAANAHPDSTHSFDGKLGVWRVCAPKTADRISKNHKEGDLYEQDCTLD-HLWHRKW*TELLPAIKSKMSWLQGKRIVIQQDSAILHTGKGNSEILSGTGKT-------EGGSIRLVMQPCNSPD 369 + K M + A A P FDG++G++R K A R SK HK GD+Y++DC +D L++ +L+P I KM+ + +Q D A H + L+ GK + I+ V+QP NSPD Sbjct: 281 VQKVMGLRAVARPCG--DFDGRIGMYRCAKKKVAQRNSKFHKRGDVYDEDCDVDAKLFYELVTEKLIPDIYRKMADFD--IVFVQMDGARPHVKC--MDALNAAGKERKRIDVKQMPMIKFVLQPANSPD 404
BLAST of mRNA_C-tenellus_contig11611.1.1 vs. uniprot
Match: A0A2E6C2P6_9EURY (Uncharacterized protein (Fragment) n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E6C2P6_9EURY) HSP 1 Score: 62.0 bits (149), Expect = 6.770e-9 Identity = 42/128 (32.81%), Postives = 68/128 (53.12%), Query Frame = 1 Query: 4 IPKTMIIAANAHPDSTHSFDGKLGVWRVCAPKTADRISKNHKEGDLYEQDCTLD-HLWHRKW*TELLPAIKSKMSWLQGKRIVIQQDSAILHTGK-GNSEILSGTGKTEGGS----IRLVMQPCNSPD 369 + K M + A A P F+G+LG++R K A+R SK H+ GD+Y++DC +D +++ +L+P I KM+ + +Q D+A H + + E + K G I+ V+QP NSPD Sbjct: 37 VQKVMGLCAVARPYG--DFNGRLGMYRCARKKVAERNSKYHERGDVYDEDCEVDGDMFYEIVTKQLIPDIYDKMADFDV--VFVQMDNARPHVKRIADLERIGKKRKRIKGKQMPLIKFVLQPANSPD 160 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11611.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig11611.1.1 >prot_C-tenellus_contig11611.1.1 ID=prot_C-tenellus_contig11611.1.1|Name=mRNA_C-tenellus_contig11611.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=58bp MIIAANAHPDSTHSFDGKLGVWRVCAPKTADRISKNHKEGDLYEQDCTLDback to top mRNA from alignment at C-tenellus_contig11611:3626..3999- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig11611.1.1 ID=mRNA_C-tenellus_contig11611.1.1|Name=mRNA_C-tenellus_contig11611.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=374bp|location=Sequence derived from alignment at C-tenellus_contig11611:3626..3999- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig11611:3626..3999- >mRNA_C-tenellus_contig11611.1.1 ID=mRNA_C-tenellus_contig11611.1.1|Name=mRNA_C-tenellus_contig11611.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=174bp|location=Sequence derived from alignment at C-tenellus_contig11611:3626..3999- (Choristocarpus tenellus KU2346)back to top |