mRNA_C-tenellus_contig1160.2.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig1160.2.1
Unique NamemRNA_C-tenellus_contig1160.2.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig1160.2.1 vs. uniprot
Match: A0A812UU75_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812UU75_9DINO)

HSP 1 Score: 266 bits (680), Expect = 1.400e-82
Identity = 145/291 (49.83%), Postives = 191/291 (65.64%), Query Frame = 1
Query:    1 AVPNFMDNWTVFYWGWWIAWSPFVGMFVARISRGRSIREVIHYSLSAPLLYAILWFSVFGGAGIKM-------QNTATTL--SAD--LTVDETFADSG---CYATDNPAHSPVCNLFGAESSTAWFMLLDQYYGLGNFLGGLSIVTIVLYFITSSDSGSLVVDYIAANGQEGTHPAQRILWAFTEGGLATGLIKAGGSSGTAALQSASISAGLPFTVVICLLCTSLWRACGQANYDIAPVMERKNFSFSVCGGVFDVMEWIFSLGKHRLPSRKLVLGFLFAMVCPGLFIHR 831
            A P++MD WT+FYWGWWIAW+PFVG F+ARISRGR+I++V+ Y+L+ P LYA+LWF +FG A I+M       +N  T L  +AD  L  D TF  SG   C+  D PA  PV  LFG      WF L+ QYYG+GN L  +SIVT +LYF+TSSDSGSLVVD IAANG+E  H  QRI WA TEG +A   + +GG S   ALQ+ SI  GLPFT+V+ ++CTSLWRA      +IAP  +R +++  + GG+FD  EW+ + G+ ++P  ++   F  A V P +   R
Sbjct:  111 AHPSWMDWWTIFYWGWWIAWAPFVGTFMARISRGRTIKQVVLYTLTLPFLYAVLWFCIFGAAAIRMNRRAIWLENVGTELYGNADYFLHTDLTFRPSGAGKCF--DVPASLPV--LFGGY----WFDLMGQYYGMGNSLVFVSIVTTILYFVTSSDSGSLVVDLIAANGRE-AHVVQRIFWAVTEGAVAIAALASGGFSSLTALQAVSIVMGLPFTIVMMMMCTSLWRALKVEAGEIAPRGQRPDWNLPLYGGIFDAPEWVLTFGRSKMPPLRVFTTFALATVMPPVLFWR 392          
BLAST of mRNA_C-tenellus_contig1160.2.1 vs. uniprot
Match: A0A812UQ83_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812UQ83_9DINO)

HSP 1 Score: 269 bits (687), Expect = 1.830e-81
Identity = 146/306 (47.71%), Postives = 193/306 (63.07%), Query Frame = 1
Query:    1 AVPNFMDNWTVFYWGWWIAWSPFVGMFVARISRGRSIREVIHYSLSAPLLYAILWFSVFGGAGIKM-------QNTATTL--SAD--LTVDETFADSG---CYATDNPAH---------------SPVCNLFGAESSTAWFMLLDQYYGLGNFLGGLSIVTIVLYFITSSDSGSLVVDYIAANGQEGTHPAQRILWAFTEGGLATGLIKAGGSSGTAALQSASISAGLPFTVVICLLCTSLWRACGQANYDIAPVMERKNFSFSVCGGVFDVMEWIFSLGKHRLPSRKLVLGFLFAMVCPGLFIHR 831
            A P++MD WT+FYWGWWIAW+PFVG F+ARISRGR+I++V+ Y+L+ P LYA+LWF +FG A I+M       +N  T L  +AD  L  D TF  SG   C+  D PA                SPVC     +SS  WF L+ QYYG+GN L  +SIVT +LYF+TSSDSGSLVVD IAANG+E  H  QRI WA TEG +A   + +GG S   ALQ+ SI  GLPFT+V+ ++CTSLWRA      +IAP  +R +++  + GG+FD  EW+ + G+ ++P  ++   F  A V P +   R
Sbjct:  308 AHPSWMDWWTIFYWGWWIAWAPFVGTFMARISRGRTIKQVVLYTLTLPFLYAVLWFCIFGAAAIRMNRRAIWLENVGTELYGNADYFLHTDLTFRPSGAGKCF--DVPASLPGDAYSSYSVNTDVSPVCKFSSGDSSGYWFDLMGQYYGMGNSLVFVSIVTTILYFVTSSDSGSLVVDLIAANGRE-AHVVQRIFWAVTEGAVAIAALASGGFSSLTALQAVSIVMGLPFTIVMMMMCTSLWRALKVEAGEIAPRGQRPDWNLPLYGGIFDAPEWVLTFGRSKMPPLRVFTTFALATVMPPVLFWR 610          
BLAST of mRNA_C-tenellus_contig1160.2.1 vs. uniprot
Match: A0A812TAE4_9DINO (BetT2 protein n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A812TAE4_9DINO)

HSP 1 Score: 269 bits (687), Expect = 4.600e-81
Identity = 146/306 (47.71%), Postives = 191/306 (62.42%), Query Frame = 1
Query:    1 AVPNFMDNWTVFYWGWWIAWSPFVGMFVARISRGRSIREVIHYSLSAPLLYAILWFSVFGGAGIKMQNTATTL---------SAD--LTVDETFADSG---CYATDNPAH---------------SPVCNLFGAESSTAWFMLLDQYYGLGNFLGGLSIVTIVLYFITSSDSGSLVVDYIAANGQEGTHPAQRILWAFTEGGLATGLIKAGGSSGTAALQSASISAGLPFTVVICLLCTSLWRACGQANYDIAPVMERKNFSFSVCGGVFDVMEWIFSLGKHRLPSRKLVLGFLFAMVCPGLFIHR 831
            A P++MD WT+FYWGWWIAW+PFVG F+ARISRGR+I++V+ Y+L+ P +YA+LWF +FG AGI+M   A  L         +AD  L  D  F  SG   C+  D PA                SPVC   G +SS  WF L+ QYYG+G  L  +SIVT +LYF+TSSDSGSLVVD IAANG+E  H  QR+ WAFTEG +A   + +GG S   ALQ+ SI  GLPFTVV+ ++CTSLWRA      +IAP  +R ++   + GG+FD  E++ S G+ +LPS      F+   + P L  +R
Sbjct:  356 ANPSWMDWWTIFYWGWWIAWAPFVGTFMARISRGRTIKQVVMYTLTLPFMYAVLWFCIFGAAGIRMNRRAIWLENIGTTEFGNADHFLHTDTNFRPSGAGKCF--DVPASIPGEAFAAYAVNINVSPVCKYSGGDSSGYWFDLMGQYYGMGQALTFVSIVTTILYFVTSSDSGSLVVDLIAANGRE-AHVVQRVFWAFTEGAVAIACLLSGGFSSLTALQAVSIVMGLPFTVVMMMMCTSLWRALKIEAGEIAPRGQRTDWKMPLYGGIFDAPEFLLSFGRSKLPSANTCGTFVLGALAPPLVFYR 658          
BLAST of mRNA_C-tenellus_contig1160.2.1 vs. uniprot
Match: A0A7S4CB01_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CB01_9EUGL)

HSP 1 Score: 269 bits (688), Expect = 6.000e-81
Identity = 139/300 (46.33%), Postives = 186/300 (62.00%), Query Frame = 1
Query:    1 AVPNFMDNWTVFYWGWWIAWSPFVGMFVARISRGRSIREVIHYSLSAPLLYAILWFSVFGGAGIKMQNTATTLSADLTV----------------------------DETFADSGCYATDNPAHSPVCNLFGAESSTAWFMLLDQYYGLGNFLGGLSIVTIVLYFITSSDSGSLVVDYIAANGQEGTHPAQRILWAFTEGGLATGLIKAGGSSGTAALQSASISAGLPFTVVICLLCTSLWRACGQ-ANYDIAPVMERKNFSFSVCGGVFDVMEWIFSLGKHRLPSRKLVLGFLFAMVCP 813
            A P +M  WT+FYWGWWIAWSPFVG F+ARISR R++REVI+YSL APLLYA LWF+VFGGAGIKM   A    A  T+                             E  A  G  +   P H PVC    +++   WF LL QY+GLG+FL  ++I+ I+LYF+TSSDSGSLVVD +++NG    H   R+ W+ TEG +ATGLI +GG+    ALQ+ASI +GLP+T  +C++CT LWRA  +  N + A   E   + F++  G+FD +E++FSLG H  P+  +   F+ A++CP
Sbjct:  400 ANPAWMSWWTIFYWGWWIAWSPFVGTFLARISRNRTVREVINYSLCAPLLYAFLWFAVFGGAGIKMHRAAIEQEAQATLLGVVEQIKVEGFNHGPQCFNSGPVQKNGVEVMAAIGTSSALGPLHGPVCKFDYSDADGIWFDLLQQYHGLGDFLSVVTIIGIILYFVTSSDSGSLVVDMMSSNGDMHPHIISRLFWSVTEGAVATGLIVSGGADALKALQAASICSGLPYTFFLCIMCTCLWRALDKHVNPEKA---ETPKWKFAMLDGIFDAIEFVFSLGSHSFPAGHIWWNFVLAVLCP 696          
BLAST of mRNA_C-tenellus_contig1160.2.1 vs. uniprot
Match: A0A813ERD7_POLGL (Hypothetical protein n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813ERD7_POLGL)

HSP 1 Score: 259 bits (663), Expect = 9.510e-80
Identity = 142/308 (46.10%), Postives = 189/308 (61.36%), Query Frame = 1
Query:    1 AVPNFMDNWTVFYWGWWIAWSPFVGMFVARISRGRSIREVIHYSLSAPLLYAILWFSVFGGAGIKMQNTATTLS-----------------ADL---------TVDET-----FADSGCYATDNPAHSPVCNLFGAESSTAWFMLLDQYYGLGNFLGGLSIVTIVLYFITSSDSGSLVVDYIAANGQEGTHPAQRILWAFTEGGLATGLIKAGGSSGTAALQSASISAGLPFTVVICLLCTSLWRACGQANYDIAPVMERKNFSFSVCGGVFDVMEWIFSLGKHRLPSRKLVLGFLFAMVCPGLFIHR 831
            A   +MD WT+FYWGWWI+W+PFVG F+ARISRGR+IR V  Y+LS P +YAI+WF  FGGA I+M   AT LS                 +D          +V E+     +A +G Y TD    SPVC     + +  WF L+ QY+G+G FL  +S+ T VLYF+TSSDSGSLVVD IA NG+E +H  QR+ WA TEG +A  L++AGG    +ALQS SI AGLPFTVVI L+CT+LWRA       +    +R +++  + GG+FD++E++ +LGK  LP  K VL F   +  P L + +
Sbjct:  111 ANQAWMDWWTIFYWGWWISWAPFVGTFMARISRGRTIRNVFLYTLSVPFVYAIVWFGTFGGAAIRMHRRATFLSDMGLELHNSSDFYLHTSSDFRPAGAGKCYSVPESLNHADYAAAGKYVTDTKV-SPVCAFSYKDDAGYWFDLMGQYHGMGPFLVAVSLFTTVLYFVTSSDSGSLVVDLIANNGRE-SHVVQRVFWAITEGAVALALLRAGGPESLSALQSISICAGLPFTVVIMLMCTALWRALKIDQKHMPARDQRVDWALPLYGGIFDILEFVLTLGKSGLPQSKAVLDFFLGLFAPPLLLWK 416          
BLAST of mRNA_C-tenellus_contig1160.2.1 vs. uniprot
Match: A0A813FMC8_POLGL (Hypothetical protein n=5 Tax=Polarella glacialis TaxID=89957 RepID=A0A813FMC8_POLGL)

HSP 1 Score: 259 bits (662), Expect = 1.710e-79
Identity = 140/308 (45.45%), Postives = 188/308 (61.04%), Query Frame = 1
Query:    1 AVPNFMDNWTVFYWGWWIAWSPFVGMFVARISRGRSIREVIHYSLSAPLLYAILWFSVFGGAGIKMQNTATTLS---------ADL-----------------TVDET-----FADSGCYATDNPAHSPVCNLFGAESSTAWFMLLDQYYGLGNFLGGLSIVTIVLYFITSSDSGSLVVDYIAANGQEGTHPAQRILWAFTEGGLATGLIKAGGSSGTAALQSASISAGLPFTVVICLLCTSLWRACGQANYDIAPVMERKNFSFSVCGGVFDVMEWIFSLGKHRLPSRKLVLGFLFAMVCPGLFIHR 831
            A P +MD WT+FYWGWWI+W+PFVG F+ARISRGR+IR V+ Y+LS P  Y+ILWF  FGGA I+M   AT LS         AD                  +V E+     +A +G Y TD    SPVC     + +  WF L+ QY+G+G FL  +S++T VLYF+TSSDSGSLVVD IA NGQE +H  Q++ WA TEG +A  L++AGG     ALQS SI AGLPFTV+I L+C++LWRA       +    +R +++  + GG+FD++E++ +LGK  LP    V  F   +  P L + +
Sbjct:  111 ANPAWMDWWTIFYWGWWISWAPFVGTFMARISRGRTIRNVLLYTLSVPFCYSILWFGTFGGAAIRMHRRATFLSDMGLQLHQDADFYLHTSSDFRPAGAGKCYSVPESLNHPDYAAAGAYVTDMKV-SPVCAFSWKDDAGYWFDLMGQYHGMGPFLVVVSLITTVLYFVTSSDSGSLVVDLIANNGQE-SHKVQQVFWALTEGAVAIALLRAGGQESLKALQSISICAGLPFTVIIMLMCSALWRALKIDQQHMPARDQRVDWALPLYGGIFDILEFVLTLGKSGLPQSSTVRDFFLGLFAPPLLLWK 416          
BLAST of mRNA_C-tenellus_contig1160.2.1 vs. uniprot
Match: A0A812USJ2_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812USJ2_9DINO)

HSP 1 Score: 269 bits (687), Expect = 4.720e-79
Identity = 146/306 (47.71%), Postives = 193/306 (63.07%), Query Frame = 1
Query:    1 AVPNFMDNWTVFYWGWWIAWSPFVGMFVARISRGRSIREVIHYSLSAPLLYAILWFSVFGGAGIKM-------QNTATTL--SAD--LTVDETFADSG---CYATDNPAH---------------SPVCNLFGAESSTAWFMLLDQYYGLGNFLGGLSIVTIVLYFITSSDSGSLVVDYIAANGQEGTHPAQRILWAFTEGGLATGLIKAGGSSGTAALQSASISAGLPFTVVICLLCTSLWRACGQANYDIAPVMERKNFSFSVCGGVFDVMEWIFSLGKHRLPSRKLVLGFLFAMVCPGLFIHR 831
            A P++MD WT+FYWGWWIAW+PFVG F+ARISRGR+I++V+ Y+L+ P LYA+LWF +FG A I+M       +N  T L  +AD  L  D TF  SG   C+  D PA                SPVC     +SS  WF L+ QYYG+GN L  +SIVT +LYF+TSSDSGSLVVD IAANG+E  H  QRI WA TEG +A   + +GG S   ALQ+ SI  GLPFT+V+ ++CTSLWRA      +IAP  +R +++  + GG+FD  EW+ + G+ ++P  ++   F  A V P +   R
Sbjct:  747 AHPSWMDWWTIFYWGWWIAWAPFVGTFMARISRGRTIKQVVLYTLTLPFLYAVLWFCIFGAAAIRMNRRAIWLENVGTELYGNADYFLHTDLTFRPSGAGKCF--DVPASLPGDAYSSYSVNTDVSPVCKFSSGDSSGYWFDLMGQYYGMGNSLVFVSIVTTILYFVTSSDSGSLVVDLIAANGRE-AHVVQRIFWAVTEGAVAIAALASGGFSSLTALQAVSIVMGLPFTIVMMMMCTSLWRALKVEAGEIAPRGQRPDWNLPLYGGIFDAPEWVLTFGRSKMPPLRVFTTFALATVMPPVLFWR 1049          
BLAST of mRNA_C-tenellus_contig1160.2.1 vs. uniprot
Match: A0A813LBT5_POLGL (Hypothetical protein n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813LBT5_POLGL)

HSP 1 Score: 261 bits (667), Expect = 5.300e-78
Identity = 142/306 (46.41%), Postives = 189/306 (61.76%), Query Frame = 1
Query:    1 AVPNFMDNWTVFYWGWWIAWSPFVGMFVARISRGRSIREVIHYSLSAPLLYAILWFSVFGGAGIKMQNTATTLS---------ADL-----------------TVDETF---ADSGCYATDNPAHSPVCNLFGAESSTAWFMLLDQYYGLGNFLGGLSIVTIVLYFITSSDSGSLVVDYIAANGQEGTHPAQRILWAFTEGGLATGLIKAGGSSGTAALQSASISAGLPFTVVICLLCTSLWRACGQANYDIAPVMERKNFSFSVCGGVFDVMEWIFSLGKHRLPSRKLVLGFLFAMVCPGLFIHR 831
            A P +MD WT+FYWGWWI+W+PFVG F+ARISRGR+IR VI Y+LS P  Y+++WFS FGGA I+M   A  LS         AD                  +V E+    A +G Y TD    SPVC    A+ S  WF L+ QY+G+G FL  +S++T VLYF+TSSDSGSLVVD I+ANG+E  H  QR+ WA TEG +A  L++AGG     ALQS SI AGLPFTV+I L+C++LWRA       +    +R +++  + GG+FD++E++ +LGK RLP    V  F   +  P L + +
Sbjct:  362 ADPAWMDWWTIFYWGWWISWAPFVGTFMARISRGRTIRNVILYTLSVPFCYSLVWFSTFGGAAIRMHRRAAFLSDKGLSLHQDADYYLHASSDFRPAGAGKCYSVPESLIPNAAAGAYVTDTKL-SPVCAFSYADDSGYWFDLMGQYHGMGPFLCVVSLITTVLYFVTSSDSGSLVVDLISANGRE-AHVVQRVFWAITEGAVAIALLRAGGQESLKALQSISICAGLPFTVIIMLMCSALWRALKIDQKHMPARDQRVDWALPLYGGIFDILEFVLTLGKCRLPQCSAVRDFFLGLFAPPLLLWK 665          
BLAST of mRNA_C-tenellus_contig1160.2.1 vs. uniprot
Match: A0A812X6B0_9DINO (IGHMBP2 protein (Fragment) n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812X6B0_9DINO)

HSP 1 Score: 266 bits (681), Expect = 9.530e-78
Identity = 145/306 (47.39%), Postives = 189/306 (61.76%), Query Frame = 1
Query:    1 AVPNFMDNWTVFYWGWWIAWSPFVGMFVARISRGRSIREVIHYSLSAPLLYAILWFSVFGGAGIKMQNTATTL---------SAD--LTVDETFADSG---CYATDNPAH---------------SPVCNLFGAESSTAWFMLLDQYYGLGNFLGGLSIVTIVLYFITSSDSGSLVVDYIAANGQEGTHPAQRILWAFTEGGLATGLIKAGGSSGTAALQSASISAGLPFTVVICLLCTSLWRACGQANYDIAPVMERKNFSFSVCGGVFDVMEWIFSLGKHRLPSRKLVLGFLFAMVCPGLFIHR 831
            A P++MD WT+FYWGWWIAW+PFVG F+ARISRGR+I++V+ Y+L+ P +YA+LWF +FG AGI+M   A  L         +AD  L  D  F  S    C+  D PA                SPVC   G +S   WF L+ QYYG+G  L  +SIVT +LYF+TSSDSGSLVVD IAANG+E  H  QR+ WAFTEG +A   + AGG S   ALQ+ SI  GLPFT+V+ ++CTSLWRA      +IAP  +R ++   + GG+FD  E++ S G+ RLPS    + F  A + P +   R
Sbjct:  309 ANPSWMDWWTIFYWGWWIAWAPFVGTFMARISRGRTIKQVVMYTLTLPFMYAVLWFCIFGAAGIRMNRRAIWLENIGTTEFGNADYFLHTDTNFRPSAAGRCF--DVPASIPGDAFAAYSVNINVSPVCKFSGGDSEGYWFDLMGQYYGMGQALTFVSIVTTILYFVTSSDSGSLVVDLIAANGRE-AHVVQRVFWAFTEGAVAIACLFAGGFSSLDALQAVSIVMGLPFTIVMMMMCTSLWRALKIEAGEIAPRGQRTDWKMPMYGGIFDAPEYLLSCGRSRLPSMNTSITFALATLAPPMVFWR 611          
BLAST of mRNA_C-tenellus_contig1160.2.1 vs. uniprot
Match: A0A1Q9E309_SYMMI (Uncharacterized protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9E309_SYMMI)

HSP 1 Score: 265 bits (678), Expect = 9.650e-78
Identity = 147/306 (48.04%), Postives = 190/306 (62.09%), Query Frame = 1
Query:    1 AVPNFMDNWTVFYWGWWIAWSPFVGMFVARISRGRSIREVIHYSLSAPLLYAILWFSVFGGAGIKMQNTATTL---------SAD--LTVDETFADSG---CYATDNPAH---------------SPVCNLFGAESSTAWFMLLDQYYGLGNFLGGLSIVTIVLYFITSSDSGSLVVDYIAANGQEGTHPAQRILWAFTEGGLATGLIKAGGSSGTAALQSASISAGLPFTVVICLLCTSLWRACGQANYDIAPVMERKNFSFSVCGGVFDVMEWIFSLGKHRLPSRKLVLGFLFAMVCPGLFIHR 831
            A P++MD WT+FYWGWWIAW+PFVG F+ARISRGR+I++V+ Y+L+ P +YA+LWF +FG AGI+M   A  L         +AD  L  D TF  SG   C+  D PA                SPVC   G +SS  WF L+ QYYG+G  L  +SIVT +LYF+TSSDSGSLVVD IAANG+E  H  QR+ WAFTEG +A   + +GG S   ALQ+ SI  GLPFTVV+ ++CTSLWRA      +IAP  +R ++   + GG+FD  E++ S  +  LPS      F+ A + P L   R
Sbjct:  769 ANPSWMDWWTIFYWGWWIAWAPFVGTFMARISRGRTIKQVVMYTLTLPFMYAVLWFCIFGAAGIRMNRRAIWLENIGTTEFGNADYFLHTDTTFRPSGAGKCF--DVPASIPGEAFAAYSVNINVSPVCKYSGGDSSGYWFDLMGQYYGMGQALTFVSIVTTILYFVTSSDSGSLVVDLIAANGRE-AHVVQRVFWAFTEGAVAIACLLSGGFSSLTALQAVSIVMGLPFTVVMMMMCTSLWRALKIEAGEIAPRGQRTDWKMPMYGGIFDAPEYLLSSFRSPLPSMNTCGTFVLATLAPPLVFWR 1071          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1160.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A812UU75_9DINO1.400e-8249.83Hypothetical protein n=1 Tax=Symbiodinium natans T... [more]
A0A812UQ83_9DINO1.830e-8147.71Hypothetical protein n=1 Tax=Symbiodinium natans T... [more]
A0A812TAE4_9DINO4.600e-8147.71BetT2 protein n=3 Tax=Symbiodinium TaxID=2949 RepI... [more]
A0A7S4CB01_9EUGL6.000e-8146.33Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A813ERD7_POLGL9.510e-8046.10Hypothetical protein n=3 Tax=Polarella glacialis T... [more]
A0A813FMC8_POLGL1.710e-7945.45Hypothetical protein n=5 Tax=Polarella glacialis T... [more]
A0A812USJ2_9DINO4.720e-7947.71Hypothetical protein n=1 Tax=Symbiodinium natans T... [more]
A0A813LBT5_POLGL5.300e-7846.41Hypothetical protein n=3 Tax=Polarella glacialis T... [more]
A0A812X6B0_9DINO9.530e-7847.39IGHMBP2 protein (Fragment) n=1 Tax=Symbiodinium sp... [more]
A0A1Q9E309_SYMMI9.650e-7848.04Uncharacterized protein n=2 Tax=Symbiodinium TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig1160contigC-tenellus_contig1160:1242..2796 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog45351.EDO48013
PFAMsBCCT,PLAC8
Model size831
Max annot lvl33208|Metazoa
Hectar predicted targeting categorysignal anchor
Exons3
Evalue3.05e-64
EggNOG OGsCOG1292@1|root,2QRGP@2759|Eukaryota,39V2A@33154|Opisthokonta,3BIV3@33208|Metazoa
DescriptionBCCT, betaine/carnitine/choline family transporter
Cds size816
COG categoryM
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789186.0881586-CDS-C-tenellus_contig1160:1241..16011680789186.0881586-CDS-C-tenellus_contig1160:1241..1601Choristocarpus tenellus KU2346CDSC-tenellus_contig1160 1242..1601 -
1680789186.0998414-CDS-C-tenellus_contig1160:2064..23041680789186.0998414-CDS-C-tenellus_contig1160:2064..2304Choristocarpus tenellus KU2346CDSC-tenellus_contig1160 2065..2304 -
1680789186.112784-CDS-C-tenellus_contig1160:2565..27811680789186.112784-CDS-C-tenellus_contig1160:2565..2781Choristocarpus tenellus KU2346CDSC-tenellus_contig1160 2566..2781 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789186.1275392-UTR-C-tenellus_contig1160:2781..27961680789186.1275392-UTR-C-tenellus_contig1160:2781..2796Choristocarpus tenellus KU2346UTRC-tenellus_contig1160 2782..2796 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig1160.2.1prot_C-tenellus_contig1160.2.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig1160 1242..2781 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig1160.2.1

>prot_C-tenellus_contig1160.2.1 ID=prot_C-tenellus_contig1160.2.1|Name=mRNA_C-tenellus_contig1160.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=272bp
MDNWTVFYWGWWIAWSPFVGMFVARISRGRSIREVIHYSLSAPLLYAILW
FSVFGGAGIKMQNTATTLSADLTVDETFADSGCYATDNPAHSPVCNLFGA
ESSTAWFMLLDQYYGLGNFLGGLSIVTIVLYFITSSDSGSLVVDYIAANG
QEGTHPAQRILWAFTEGGLATGLIKAGGSSGTAALQSASISAGLPFTVVI
CLLCTSLWRACGQANYDIAPVMERKNFSFSVCGGVFDVMEWIFSLGKHRL
PSRKLVLGFLFAMVCPGLFIHR
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mRNA from alignment at C-tenellus_contig1160:1242..2796-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig1160.2.1 ID=mRNA_C-tenellus_contig1160.2.1|Name=mRNA_C-tenellus_contig1160.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1555bp|location=Sequence derived from alignment at C-tenellus_contig1160:1242..2796- (Choristocarpus tenellus KU2346)
GCCGTGCCTAACTTCATGGATAATTGGACCGTCTTTTACTGGGGATGGTG GATTGCATGGTCTCCCTTTGTTGGCATGTTTGTGGCCCGCATCAGCAGGG GACGCTCGATACGTGAGGTCATCCACTACTCTCTGAGCGCACCTCTTCTC TACGCGATATTGTGGTTTTCCGTTTTTGGTGGTGCTGGTATCAAGATGCA GAACACCGCCACCACCCTGAGTGCTGACCTGGTAAGAAAGCCACTTCACT GAGAACATAACTACCTCATGCATCTTTGTCCTTCATCTTTACACATACCT CAACTTAAATTGTGTGGCCTTCGTGCAGCACGCCCTTCCACCAAGATTCT GATATACCAGTGCTTTACTATCTTGACCACTTGTTCCTTCTCATGCCCTC GACCCATACCCCACGGTGCCTCACTTTCTTCCCTGTCGTTTTTGGCACTA TACCTGGACTTTTCTGCGGATTTTCCGCGTCTTCGGTTTCAGACTGTTGA CGAGACTTTTGCTGACAGCGGGTGTTATGCGACGGACAACCCCGCACATA GCCCTGTTTGCAACCTCTTTGGTGCTGAGTCCTCTACTGCGTGGTTCATG CTCTTGGACCAATACTATGGGCTGGGGAACTTCCTTGGTGGGCTCAGCAT TGTGACCATCGTTCTGTACTTTATCACTTCATCTGATAGTGGGTCTCTCG TGGTGGACTATATTGCGGCCAATGGTCAGGAGGTATGTTTCCACACACGG GATGAACACTGTTGATGTTGCACATGGTACATGGGGTCCAGGATTGTGTG TGTGCGTGTAAGAAGTGTCAGTATACGAAACACTGCTATCTTATGGAAAG GGGACGACCGGCTACAGGTGCAGGAAAATTTGTCCCAAGTTGGCACAGGT ATAAAACATGGGGAGTGGAATGGTATGCAGGTTATGACATACGCAGAATA ATTGATATAAGGTACATGTAACTTCTTCAACGATGTATCTCATGGCCATA TCATACAGCCAGGCAAAGGCAACAATCGGCCAACATGTTATTGATACCCT GGTAATGAGCAAGGGGGCAAGGGGGAAGCTACTTGTTGCCTTGGTGATTC TGATGACACACTAAGGAAGAAGATTGATTGGGCAGGCTTTCACCCCCTCC CCTCTCCTGCTTGTCCTCTCACCAACCTTACTTTTGTCTCTACAGGGCAC GCACCCTGCCCAGCGTATCCTGTGGGCCTTCACAGAAGGAGGCCTCGCCA CAGGGCTCATCAAAGCTGGGGGATCTAGTGGGACTGCGGCCCTTCAGTCA GCCTCTATCTCGGCGGGTCTGCCCTTCACTGTTGTGATTTGTCTGCTGTG TACATCCCTCTGGCGTGCTTGTGGGCAGGCAAACTACGATATTGCTCCAG TCATGGAGCGAAAGAATTTCAGCTTTTCGGTTTGTGGAGGGGTGTTTGAT GTGATGGAGTGGATCTTTTCTCTTGGGAAGCATCGTCTGCCTAGCAGGAA GTTGGTCTTAGGGTTCCTGTTCGCCATGGTGTGCCCGGGGCTCTTCATCC ACAGG
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Coding sequence (CDS) from alignment at C-tenellus_contig1160:1242..2796-

>mRNA_C-tenellus_contig1160.2.1 ID=mRNA_C-tenellus_contig1160.2.1|Name=mRNA_C-tenellus_contig1160.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=816bp|location=Sequence derived from alignment at C-tenellus_contig1160:1242..2796- (Choristocarpus tenellus KU2346)
ATGGATAATTGGACCGTCTTTTACTGGGGATGGTGGATTGCATGGTCTCC
CTTTGTTGGCATGTTTGTGGCCCGCATCAGCAGGGGACGCTCGATACGTG
AGGTCATCCACTACTCTCTGAGCGCACCTCTTCTCTACGCGATATTGTGG
TTTTCCGTTTTTGGTGGTGCTGGTATCAAGATGCAGAACACCGCCACCAC
CCTGAGTGCTGACCTGACTGTTGACGAGACTTTTGCTGACAGCGGGTGTT
ATGCGACGGACAACCCCGCACATAGCCCTGTTTGCAACCTCTTTGGTGCT
GAGTCCTCTACTGCGTGGTTCATGCTCTTGGACCAATACTATGGGCTGGG
GAACTTCCTTGGTGGGCTCAGCATTGTGACCATCGTTCTGTACTTTATCA
CTTCATCTGATAGTGGGTCTCTCGTGGTGGACTATATTGCGGCCAATGGT
CAGGAGGGCACGCACCCTGCCCAGCGTATCCTGTGGGCCTTCACAGAAGG
AGGCCTCGCCACAGGGCTCATCAAAGCTGGGGGATCTAGTGGGACTGCGG
CCCTTCAGTCAGCCTCTATCTCGGCGGGTCTGCCCTTCACTGTTGTGATT
TGTCTGCTGTGTACATCCCTCTGGCGTGCTTGTGGGCAGGCAAACTACGA
TATTGCTCCAGTCATGGAGCGAAAGAATTTCAGCTTTTCGGTTTGTGGAG
GGGTGTTTGATGTGATGGAGTGGATCTTTTCTCTTGGGAAGCATCGTCTG
CCTAGCAGGAAGTTGGTCTTAGGGTTCCTGTTCGCCATGGTGTGCCCGGG
GCTCTTCATCCACAGG
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