mRNA_C-tenellus_contig116.4.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig116.4.1
Unique NamemRNA_C-tenellus_contig116.4.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig116.4.1 vs. uniprot
Match: G4YQ15_PHYSP (Cyclin-F n=20 Tax=Phytophthora TaxID=4783 RepID=G4YQ15_PHYSP)

HSP 1 Score: 629 bits (1622), Expect = 9.420e-213
Identity = 333/640 (52.03%), Postives = 434/640 (67.81%), Query Frame = 2
Query:  173 LDILLQVLSFFVSSASVDEAPITAAMAVSRCWKKACNSTALWSKASWELETGALNWARFENQGKKAEGTEGVCFQCRDRGTNRIYAMKKARAYPKGEGVPYYMLRELAALKGVDHPNVSALCHVNLHDSKLRVFFPYIQYTLHDYLNPTSDRNGGEPLDHLTAKDLLRQLLRAVSYCHRRGVLHRNLKPKHLLIIPGRGDNKLSGATLKVSDFALVRLAGYPRRTYTSEVVTLWYRPPEILMGVRDYTPAVDMWSVGCIFVQMLRGKPLFSGVSQIDQLFQVFNKLATPTTDTWPEFVKLPNYSAPFPNWPKRDLSKIVVGLEPLGLDLVDRLLMYDPLQRITAHEALRHPYLQDLSPT----SPKVP----------APIAPLHVPPGIPESLGLFATYLRRQEEDLCPLPDYMGRQ-SFRAEHRSMLVDWLMEVVDVFDMCHRTAFLAVSYTDRFLSRASIPRNKFQLLGATCLHVASKCEDVSYIGIEDLASCAGRAYEPKHVLDMEEEVLKTLQFQLSVPTVLDFLNVMMEMVPEFKGLSQIRNLALYLAEISLQHFNFVLFKPSVTGSSCLVLALATLGKPHWPPRLSQAAGHTLCDLEICIRDLHEVHSAMPLSHLEVIRKRYLKIERKEVATL 2047
            +DI+L V SF V++   D+  + +   VS+ WK   +  +L+         G++NW  F+N G K +GTEG C +C  R T +I AMKKAR +PKGEGVPYYMLRELA LKG+ H ++++L  ++L   +L VFFPY+  TLH+ +NP+ D NGG  L     + LL QLL A++YCHRRGVLHRNLKPKHLLI     DN LS ATL++SDFALVR  G PRRTYT EVVTLWYRPPEILMGVR Y+ AVD+WSVGCIF +M +GKPLF+G+S+IDQLFQ+F+KL+TPT++TWP F  LPNY   FP+W +R L+++  G+  LG+DL+ +LL+Y+P QRITA +ALRHPY  D +P     +PK+P          A I P       PE + LF  YLR+ E D      Y+ RQ + R  HRSMLVDWL+EVVDVF+MC RTAFLAV+YTDR+L    + + +FQLLGATCLHVASKCEDVSYIG+EDLA CA   Y    VL+MEE++L TL F LSVPT LDFLN+   M+P  +  + +  LA YL E++LQ + F+ + PSV    CL +A+ T+        L  A  +   DL+ C+ +L  ++S  P ++L VI+KRY K ER +VA +
Sbjct:  256 IDIILHVFSFLVTA---DD--LMSMSEVSKKWKDLTSRRSLYRSLPSVTPEGSVNWINFKNLGIKNKGTEGTCIKCSQRSTGKILAMKKARVFPKGEGVPYYMLRELAVLKGIKHDHIASLELISLAKDELHVFFPYVDKTLHEIINPSGDPNGGRVLPEAVIRKLLHQLLDAIAYCHRRGVLHRNLKPKHLLIKTSDPDN-LSDATLQISDFALVRATGIPRRTYTMEVVTLWYRPPEILMGVRGYSSAVDIWSVGCIFAEMAQGKPLFTGISEIDQLFQIFSKLSTPTSETWPGFSSLPNYHFEFPHWKRRPLNRLFPGISDLGIDLLTKLLVYNPDQRITAEDALRHPYFSDEAPAFLPLTPKIPMDQMCYTMSRARIGPT------PEHVELFHAYLRQTELDSWKEIKYLSRQKTLRPAHRSMLVDWLIEVVDVFEMCLRTAFLAVNYTDRYLDIVMVKKTQFQLLGATCLHVASKCEDVSYIGVEDLAMCADNVYTSVEVLEMEEKLLNTLNFTLSVPTALDFLNIYERMIPPIQKKTSM--LAHYLLELALQEYQFLKYLPSVVADCCLSMAMYTIDGFPMTKELVDACQYNWSDLKECMGELQTLYSNSPSNNLAVIKKRYSKAERCQVANV 881          
BLAST of mRNA_C-tenellus_contig116.4.1 vs. uniprot
Match: A0A6G0N017_9STRA (Cyclin-F n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0N017_9STRA)

HSP 1 Score: 628 bits (1619), Expect = 2.750e-212
Identity = 331/640 (51.72%), Postives = 432/640 (67.50%), Query Frame = 2
Query:  173 LDILLQVLSFFVSSASVDEAPITAAMAVSRCWKKACNSTALWSKASWELETGALNWARFENQGKKAEGTEGVCFQCRDRGTNRIYAMKKARAYPKGEGVPYYMLRELAALKGVDHPNVSALCHVNLHDSKLRVFFPYIQYTLHDYLNPTSDRNGGEPLDHLTAKDLLRQLLRAVSYCHRRGVLHRNLKPKHLLIIPGRGDNKLSGATLKVSDFALVRLAGYPRRTYTSEVVTLWYRPPEILMGVRDYTPAVDMWSVGCIFVQMLRGKPLFSGVSQIDQLFQVFNKLATPTTDTWPEFVKLPNYSAPFPNWPKRDLSKIVVGLEPLGLDLVDRLLMYDPLQRITAHEALRHPYLQDLSPT----SPKVP----------APIAPLHVPPGIPESLGLFATYLRRQEEDLCPLPDYMGRQ-SFRAEHRSMLVDWLMEVVDVFDMCHRTAFLAVSYTDRFLSRASIPRNKFQLLGATCLHVASKCEDVSYIGIEDLASCAGRAYEPKHVLDMEEEVLKTLQFQLSVPTVLDFLNVMMEMVPEFKGLSQIRNLALYLAEISLQHFNFVLFKPSVTGSSCLVLALATLGKPHWPPRLSQAAGHTLCDLEICIRDLHEVHSAMPLSHLEVIRKRYLKIERKEVATL 2047
            +DI+L V SF V++       + +   VS+ WK   +  +L+         G++NW  F+N G K +GTEG C +C  R T +I AMKKAR +PKGEGVPYYMLRELA LKG+ H ++++L  ++L   +L VFFPY+  TLH+ +NP+ D NGG  L     + LL QLL A++YCHRRGVLHRNLKPKHLLI     DN LS ATL++SDFALVR  G PRRTYT EVVTLWYRPPEILMGVR Y+ AVD+WSVGCIF +M +GKPLF+G+S+IDQLFQ+F+KL+TPT++TWP F  LPNY   FP+W +R L+++  G+  LG+DL+ +LL+Y+P QRITA +ALRHPY  D +P     +PK+P          A I P       PE + LF  YLR+ E +      Y+ RQ + R  HRSMLVDWL+EVVDVF+MC RTAFLAV+YTDR+L    + + +FQLLGATCLHVASKCEDVSYIG+EDLA CA   Y    VL+MEE++L TL F LSVPT LDFLN+   M+P  +   +   LA YL E++LQ + F+ + PSV  + CL +A+ T+        L  A  +   DL+ C+ +L  ++S  P ++L VI+KRY K ER +VA +
Sbjct:  257 IDIILHVFSFLVTAND-----LKSMSEVSKKWKDLTSRRSLYRSLPSVTPEGSVNWINFKNLGVKNKGTEGTCIKCCQRSTGKILAMKKARVFPKGEGVPYYMLRELAVLKGIKHDHIASLELISLAKDELHVFFPYVDKTLHEIINPSGDPNGGRVLPEAVIRKLLHQLLDAIAYCHRRGVLHRNLKPKHLLIKTSDPDN-LSDATLQISDFALVRATGIPRRTYTMEVVTLWYRPPEILMGVRGYSSAVDIWSVGCIFAEMAQGKPLFTGISEIDQLFQIFSKLSTPTSETWPGFSSLPNYHFEFPHWKRRPLNRLFPGISDLGIDLLTKLLVYNPDQRITAEDALRHPYFSDEAPAFLPLTPKIPMDQMCYTMSRARIGPT------PEHVELFHAYLRQTEMESWKEIKYLSRQKTLRPAHRSMLVDWLIEVVDVFEMCLRTAFLAVNYTDRYLDIVMVKKTQFQLLGATCLHVASKCEDVSYIGVEDLAMCADNVYTSVEVLEMEEKLLNTLNFTLSVPTALDFLNIYERMIPPIQ--KKTSKLAHYLLELALQEYQFLKYLPSVVAACCLSMAMYTMDGFPMTKELVDACQYDWSDLKECMGELQTLYSNSPSNNLAVIKKRYSKAERCQVANV 882          
BLAST of mRNA_C-tenellus_contig116.4.1 vs. uniprot
Match: D0NH66_PHYIT (Cyclin-F n=8 Tax=Phytophthora TaxID=4783 RepID=D0NH66_PHYIT)

HSP 1 Score: 625 bits (1612), Expect = 2.740e-211
Identity = 331/641 (51.64%), Postives = 436/641 (68.02%), Query Frame = 2
Query:  173 LDILLQVLSFFVSSASVDEAPITAAMA-VSRCWKKACNSTALWSKASWELETGALNWARFENQGKKAEGTEGVCFQCRDRGTNRIYAMKKARAYPKGEGVPYYMLRELAALKGVDHPNVSALCHVNLHDSKLRVFFPYIQYTLHDYLNPTSDRNGGEPLDHLTAKDLLRQLLRAVSYCHRRGVLHRNLKPKHLLIIPGRGDNKLSGATLKVSDFALVRLAGYPRRTYTSEVVTLWYRPPEILMGVRDYTPAVDMWSVGCIFVQMLRGKPLFSGVSQIDQLFQVFNKLATPTTDTWPEFVKLPNYSAPFPNWPKRDLSKIVVGLEPLGLDLVDRLLMYDPLQRITAHEALRHPYLQDLSPT----SPKVP----------APIAPLHVPPGIPESLGLFATYLRRQEEDLCPLPDYMGRQ-SFRAEHRSMLVDWLMEVVDVFDMCHRTAFLAVSYTDRFLSRASIPRNKFQLLGATCLHVASKCEDVSYIGIEDLASCAGRAYEPKHVLDMEEEVLKTLQFQLSVPTVLDFLNVMMEMVPEFKGLSQIRNLALYLAEISLQHFNFVLFKPSVTGSSCLVLALATLGKPHWPPRLSQAAGHTLCDLEICIRDLHEVHSAMPLSHLEVIRKRYLKIERKEVATL 2047
            +DI+L V SF V++  +        MA VS+ WK+  +  +L+   +     G++NW  F+N G K +GTEG C +C  R + +I AMKKAR +PKGEGVPYYMLRELA LKG+ H ++++L  ++L   +L VFFPY+  TLH+ +NP+ D NGG  L     + LL QLL A++YCHRRGVLHRNLKPKHLLI     D+ LS ATL++SDFALVR  G PRRTYT EVVTLWYRPPEILMGVR Y+ AVD+WSVGCIF +M +GKPLF+G+S+IDQLFQ+F+KL+TPT++TWP F  LPNY   FP+W +R L+++  G+  LG+DL+ +LL+Y+P QRITA +ALRHPY    +P+    +PK+P          A I P       PE + LF  YLR+ E D      Y+ RQ + R  HRSMLVDWL+EVVDVF+MC RTAFLAV+YTDR+L    + + +FQLLGATCLHVASKCEDVSYIG+EDLA CA   Y    VL+MEE++L TL F LSVPT LDFLN+   M+P  +  + +  LA YL E++LQ + F+ + PSV  + CL +A+ T+        L  A  +   DL+ C+ +L  ++S  P ++L VI+KRY K ER +VA +
Sbjct:  253 IDIILHVFSFLVTAKDLQN------MAQVSKKWKELTSRRSLYRSLASVTPEGSVNWINFKNLGIKNKGTEGTCIKCCQRSSGKILAMKKARVFPKGEGVPYYMLRELAVLKGIKHDHIASLELISLAKDELHVFFPYVDKTLHEIINPSGDPNGGRVLPEAVIRKLLHQLLDAIAYCHRRGVLHRNLKPKHLLIKTSDTDD-LSDATLQISDFALVRATGIPRRTYTMEVVTLWYRPPEILMGVRGYSSAVDIWSVGCIFAEMAQGKPLFTGISEIDQLFQIFSKLSTPTSETWPGFSSLPNYHFEFPHWKRRPLNRLFPGISDLGIDLLTKLLVYNPDQRITAEDALRHPYFSSEAPSFLPLTPKIPMDQMCYTMSRARIGPT------PEHVELFHAYLRQTELDSWREIKYLSRQKTLRPAHRSMLVDWLIEVVDVFEMCLRTAFLAVNYTDRYLDIVMVKKTQFQLLGATCLHVASKCEDVSYIGVEDLAMCADNVYTSVEVLEMEEKLLNTLNFSLSVPTALDFLNIYERMIPPIQKKTSM--LAHYLLELALQEYQFLKYLPSVVAACCLSMAMYTMDGFPMTKELVDACQYNWSDLKKCMGELQTLYSNSPSNNLAVIKKRYSKAERCQVANV 878          
BLAST of mRNA_C-tenellus_contig116.4.1 vs. uniprot
Match: A0A418ASX6_9STRA (Cyclin-F n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418ASX6_9STRA)

HSP 1 Score: 624 bits (1609), Expect = 4.710e-211
Identity = 325/633 (51.34%), Postives = 428/633 (67.61%), Query Frame = 2
Query:  173 LDILLQVLSFFVSSASVDEAPITAAMAVSRCWKKACNSTALWSKASWELETGALNWARFENQGKKAEGTEGVCFQCRDRGTNRIYAMKKARAYPKGEGVPYYMLRELAALKGVDHPNVSALCHVNLHDSKLRVFFPYIQYTLHDYLNPTSDRNGGEPLDHLTAKDLLRQLLRAVSYCHRRGVLHRNLKPKHLLIIPGRGDNKLSGATLKVSDFALVRLAGYPRRTYTSEVVTLWYRPPEILMGVRDYTPAVDMWSVGCIFVQMLRGKPLFSGVSQIDQLFQVFNKLATPTTDTWPEFVKLPNYSAPFPNWPKRDLSKIVVGLEPLGLDLVDRLLMYDPLQRITAHEALRHPYLQD------LSPTSPKVPAPIAPLHV-PPGIPESLGLFATYLRRQEEDLCPLPDYMGRQ-SFRAEHRSMLVDWLMEVVDVFDMCHRTAFLAVSYTDRFLSRASIPRNKFQLLGATCLHVASKCEDVSYIGIEDLASCAGRAYEPKHVLDMEEEVLKTLQFQLSVPTVLDFLNVMMEMVPEFKGLSQIRNLALYLAEISLQHFNFVLFKPSVTGSSCLVLALATLGKPHWPPRLSQAAGHTLCDLEICIRDLHEVHSAMPLSHLEVIRKRYLKIERKEVATL 2047
            +DI+L V SF V S  V +  +     VS+ W++  ++ +LW         G++NW  F N G K +GTEG C++C  R T R+ AMK+AR +PKGEGVPYYMLRELA L+G+ HPN+++L  ++L + +L VFFP++  TLH+ +NPTSD NGG  L     +  L QLL A+++CHRRGVLHRNLKPKHLLI     D +L  A L++SDFALVR  G PRRTYT EVVTLWYRPPEILMGVR Y+PAVD+WS+GCIF +M +GKPLF+G+S+IDQLFQ+F+KL+TPT DTWPEF  LPNY   FPNW +R  +++   +  LGLDL+ +LL Y+P +RI+A  ALRHPY         L P+ P +        V    IPE + LF +YLR  E  L     Y+ RQ + R  HRSMLVDWL+EVVDVF+MC RTAFLAV YTDRFL    + +  FQLLGATCLHVASKCEDVSYIG+EDL+ CA   Y    VL MEE++L TL F L+VPTVLDFLN+  +M+P  +  + +  LA YLAE++LQ + F+ + PS   + CL LAL ++      P L  A+ +   DL+ C+  L +V+S+  ++ L V++KRY  ++R +  T+
Sbjct:  100 VDIILHVFSFLVYSDDVYQMQL-----VSKRWRELTSTPSLWRMLPDVTADGSINWLNFRNLGIKNKGTEGTCYRCFQRSTGRMLAMKRARVFPKGEGVPYYMLRELAVLQGIKHPNIASLEMISLANDELHVFFPFVDKTLHEIINPTSDPNGGRILPEHQVRRFLHQLLDAIAHCHRRGVLHRNLKPKHLLIDTDSPD-ELDNAELRISDFALVRATGIPRRTYTMEVVTLWYRPPEILMGVRSYSPAVDIWSIGCIFAEMAQGKPLFTGISEIDQLFQIFSKLSTPTRDTWPEFTTLPNYGFDFPNWKRRPWARLFPNISDLGLDLLSKLLTYNPDERISAESALRHPYFSGSHAFPTLLPSIPMINMGFTLQRVYESNIPEHINLFHSYLRDSELALWKDIKYLSRQKTLRPIHRSMLVDWLIEVVDVFEMCLRTAFLAVHYTDRFLDTVMVKKAMFQLLGATCLHVASKCEDVSYIGVEDLSMCADNVYTSVDVLKMEEQLLNTLNFTLAVPTVLDFLNIYQKMMPPLQKRTAM--LAQYLAELALQEYRFLRYLPSCVATCCLSLALYSIEGYPMTPELQAASRYAYADLKECLVKLQDVYSSAHMNLLTVVKKRYTDVDRCQALTI 724          
BLAST of mRNA_C-tenellus_contig116.4.1 vs. uniprot
Match: A0A067D956_SAPPC (Cyclin-F n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D956_SAPPC)

HSP 1 Score: 620 bits (1599), Expect = 7.330e-210
Identity = 330/641 (51.48%), Postives = 428/641 (66.77%), Query Frame = 2
Query:  173 LDILLQVLSFFVSSASVDEAPITAAMAVSRCWKKACNSTALWSKASWELETGALNWARFENQGKKAEGTEGVCFQCRDRGTNRIYAMKKARAYPKGEGVPYYMLRELAALKGVDHPNVSALCHVNLHDSKLRVFFPYIQYTLHDYLNPTSDRNGGEPLDHLTAKDLLRQLLRAVSYCHRRGVLHRNLKPKHLLIIPGRGDNKLSGATLKVSDFALVRLAGYPRRTYTSEVVTLWYRPPEILMGVRDYTPAVDMWSVGCIFVQMLRGKPLFSGVSQIDQLFQVFNKLATPTTDTWPEFVKLPNYSAPFPNWPKRDLSKIVVGLEPLGLDLVDRLLMYDPLQRITAHEALRHPYLQDLSPTSPKVPAPIAP-------LHVP-PGIPESLGLFATYLRRQEEDLCPLPDYMGRQ-SFRAEHRSMLVDWLMEVVDVFDMCHRTAFLAVSYTDRFLSRASIPRNKFQLLGATCLHVASKCEDVSYIGIEDLASCAGRAYEPKHVLDMEEEVLKTLQFQLSVPTVLDFLNVMMEMVPEFKGLSQIRNLALYLAEISLQHFNFVLFKPSVTGSSCLVLALATLGKPHWPPRLSQAAGHTLCDLEICIRDLHEVHSAMPLSHLEVIRKRYLKIERKEVATLASLPMLQ 2068
            +D++L V SF V +  +    +     VS+ W++  + T+L+         G +NW  F N G K +GTEG C++C  R + ++ AMK+AR +PKGEGVPYYMLRELA L+G+ HP++++L  ++L   +L VFFPY+  TLH+ +NPTSD NGG  L     + LL QLL A++YCHRRGVLHRNLKPKHLLI     DN    ATL++SDFALVR  G PRR YT EVVTLWYRPPEILMG + Y+PAVD+WSVGCIF +M +GKPLF+G+S+IDQLFQ+F+KL+TPT+ TWP F  LPNY   FPNW  R L ++   + PLGLDL+ +LL Y+P  RI+A  ALRHPY    S   P++  P  P       LH    G PE + LF  +LR  E  LC    Y+ RQ + R  HRSMLVDWL+EVVDVF+MC RTAFLAV+YTDRFL    + + KFQLLGATCLHVASKCEDVSYIG+EDL+ CA   Y    VL MEE++L TL F L+VPT LDFLN+    +P  +  + +  LA YL+E++LQ ++F+ F PSV  + CL LAL  +      P L  A  +T  DL+ C+  L EV+S    + L V++KRY + +R +VA+L  LP L+
Sbjct:  215 VDMILHVFSFLVGTDDLHNMQL-----VSKRWRELTSHTSLYRHVPDTTPDGTINWLNFRNLGIKNKGTEGTCYRCYQRSSGKVLAMKRARVFPKGEGVPYYMLRELAVLQGIRHPHIASLEMISLAKDELHVFFPYVDKTLHEIINPTSDPNGGRVLPEHQIRRLLHQLLDAIAYCHRRGVLHRNLKPKHLLIDTDVADN-YDNATLRISDFALVRATGIPRRQYTMEVVTLWYRPPEILMGEKQYSPAVDVWSVGCIFAEMAQGKPLFTGISEIDQLFQIFSKLSTPTSATWPAFTSLPNYRFEFPNWKPRPLDRLFPHISPLGLDLLGKLLTYNPDARISAENALRHPYFDAASAGVPRL-LPSIPMTDMAFTLHRQYEGNPEYMDLFHAHLRDAELKLCKEVKYLSRQKTLRPLHRSMLVDWLIEVVDVFEMCLRTAFLAVNYTDRFLDVVMVKKTKFQLLGATCLHVASKCEDVSYIGVEDLSMCADNVYTSMQVLQMEEQLLNTLNFTLAVPTALDFLNIYQRSMPTLEKKTSM--LAQYLSELALQEYSFLKFLPSVVATCCLSLALYAVHGYSMTPELQAACQYTWDDLKECMGTLTEVYSGSQFNVLTVVKKRYSEDDRCQVASL--LPPLE 844          
BLAST of mRNA_C-tenellus_contig116.4.1 vs. uniprot
Match: A0A8K1CKM1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CKM1_PYTOL)

HSP 1 Score: 620 bits (1599), Expect = 2.630e-209
Identity = 325/634 (51.26%), Postives = 429/634 (67.67%), Query Frame = 2
Query:  173 LDILLQVLSFFVSSASVDEAPITAAMAVSRCWKKACNSTALWSKASWELETGALNWARFENQGKKAEGTEGVCFQCRDRGTNRIYAMKKARAYPKGEGVPYYMLRELAALKGVDHPNVSALCHVNLHDSKLRVFFPYIQYTLHDYLNPTSDRNGGEPLDHLTAKDLLRQLLRAVSYCHRRGVLHRNLKPKHLLIIPGRGDNKLSGATLKVSDFALVRLAGYPRRTYTSEVVTLWYRPPEILMGVRDYTPAVDMWSVGCIFVQMLRGKPLFSGVSQIDQLFQVFNKLATPTTDTWPEFVKLPNYSAPFPNWPKRDLSKIVVGLEPLGLDLVDRLLMYDPLQRITAHEALRHPYLQDLSPT----SPKVP----APIAPLHVPPGIPESLGLFATYLRRQEEDLCPLPDYMGRQ-SFRAEHRSMLVDWLMEVVDVFDMCHRTAFLAVSYTDRFLSRASIPRNKFQLLGATCLHVASKCEDVSYIGIEDLASCAGRAYEPKHVLDMEEEVLKTLQFQLSVPTVLDFLNVMMEMVPEFKGLSQIRNLALYLAEISLQHFNFVLFKPSVTGSSCLVLALATLGKPHWPPRLSQAAGHTLCDLEICIRDLHEVHSAMPLSHLEVIRKRYLKIERKEVATL 2047
            +D++L + SF VSS       +     VSR W++  +  +L       L  G++NW  F+N G K +GTEG CF+C  R T RI AMKKAR +PKGEGVPYYMLRELA LKG+ H +++ L  ++L   +L VFFP++  TLH+ +NPT D +GG  L     + LL QLL A++YCHRRGVLHRNLKPKHLLI     D  L  A L++SDFALVR  G P+RTYT EVVTLWYRPPEILMGVR Y+ AVD+WSVGCIF +M +GKPLF+G+S+IDQLFQ+F+KL+TPT+++WP F  LPNY   FPNW +R L+++   +  LG+DL+ +LL Y+P  RITA +ALRHPY  + +P+    +P +P    A +        IPE + LF ++LR+ E +      Y+ RQ + R  HRSMLVDWL+EVVDVF+MC RTAFLAV+YTDRFL    + + +FQLLGATCLHVASKCEDVSYIG+EDLA CA   Y    VL MEE++L TL F LS+PT LDFLN+   M+P  +  + +  LA YL E++LQ + F+ F PSV  + CL +A+ T+        L+ A  +   DL  C+ +L  ++S+ P ++L VI+KRY K ER +VAT+
Sbjct:  255 VDMILHIFSFLVSSEDFPNMGL-----VSRRWRELTSRRSLCRALPSILPDGSVNWLNFQNLGIKNKGTEGTCFKCHQRSTGRILAMKKARVFPKGEGVPYYMLRELAVLKGIKHDHIATLEMISLARDELHVFFPFVDKTLHEIINPTGDPSGGRVLSERVIRRLLHQLLDAIAYCHRRGVLHRNLKPKHLLIKTADLDT-LEDAVLQISDFALVRATGIPKRTYTMEVVTLWYRPPEILMGVRGYSSAVDIWSVGCIFAEMAQGKPLFTGISEIDQLFQIFSKLSTPTSESWPGFRSLPNYHFEFPNWRRRPLNRLFPNISDLGIDLLSKLLTYNPDHRITAEDALRHPYFSEAAPSIEALTPTIPMDQMAYVMNRLRSSTIPEHVELFHSHLRQTERESWKEIKYLSRQKTLRPAHRSMLVDWLIEVVDVFEMCLRTAFLAVNYTDRFLDIVMVKKTRFQLLGATCLHVASKCEDVSYIGVEDLAMCADNVYTSAEVLKMEEKLLNTLNFTLSIPTALDFLNIYERMIPPIQKKTSM--LAHYLLELALQEYQFLKFLPSVVATCCLSMAMYTVDGFPMSEDLADACQYRWMDLRECMSELQALYSSSPSNNLAVIKKRYSKAERCQVATI 880          
BLAST of mRNA_C-tenellus_contig116.4.1 vs. uniprot
Match: A0A3F2RSE3_9STRA (Cyclin-F n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RSE3_9STRA)

HSP 1 Score: 616 bits (1588), Expect = 3.690e-209
Identity = 327/640 (51.09%), Postives = 428/640 (66.88%), Query Frame = 2
Query:  173 LDILLQVLSFFVSSASVDEAPITAAMAVSRCWKKACNSTALWSKASWELETGALNWARFENQGKKAEGTEGVCFQCRDRGTNRIYAMKKARAYPKGEGVPYYMLRELAALKGVDHPNVSALCHVNLHDSKLRVFFPYIQYTLHDYLNPTSDRNGGEPLDHLTAKDLLRQLLRAVSYCHRRGVLHRNLKPKHLLIIPGRGDNKLSGATLKVSDFALVRLAGYPRRTYTSEVVTLWYRPPEILMGVRDYTPAVDMWSVGCIFVQMLRGKPLFSGVSQIDQLFQVFNKLATPTTDTWPEFVKLPNYSAPFPNWPKRDLSKIVVGLEPLGLDLVDRLLMYDPLQRITAHEALRHPYLQD----LSPTSPKVP----------APIAPLHVPPGIPESLGLFATYLRRQEEDLCPLPDYMGRQ-SFRAEHRSMLVDWLMEVVDVFDMCHRTAFLAVSYTDRFLSRASIPRNKFQLLGATCLHVASKCEDVSYIGIEDLASCAGRAYEPKHVLDMEEEVLKTLQFQLSVPTVLDFLNVMMEMVPEFKGLSQIRNLALYLAEISLQHFNFVLFKPSVTGSSCLVLALATLGKPHWPPRLSQAAGHTLCDLEICIRDLHEVHSAMPLSHLEVIRKRYLKIERKEVATL 2047
            +DI+L V SF V+   +          VS  W++  +  +L+         G++NW  F+N G K +GTEG C +C  R + +I AMKKAR +PKGEGVPYYMLRELA LKG+ H ++++L  ++L   +L VFFPY+  TLH+ +NPT D  GG  L     + LL QLL A++YCHRRGVLHRNLKPKHLLI     +N L  ATL++SDFALVR  G PRRTYT EVVTLWYRPPEILMGVR Y+ AVD+WSVGCIF +M +GKPLF+G+S+IDQLFQ+F+KL+TPT++TWP F  LPNY   FP+W +R L+++  G+  LG+DL+ +LL+Y+P QRITA +ALRHPY  +      P +PK+P          A I P       PE + LF  YLR+ E +      Y+ RQ + R  HRSMLVDWL+EVVDVF+MC RTAFLAV+YTDR+L    + + +FQLLGATCLHVASKCEDVSYIG+EDLA CA   Y    VL+MEE++L TL F LSVPT LDFLN+   M+P  +  + +  LA YL E++LQ + F+ + PSV  + CL +A+ TL        L  A  +   DL+ C+ +L  ++S  P ++L VI+KRY K ER +VA +
Sbjct:  145 IDIILHVFSFLVTPRDLGNMS-----RVSTKWRELTSRRSLYRSVISVTPEGSVNWINFKNLGIKNKGTEGTCIKCSQRSSGKILAMKKARVFPKGEGVPYYMLRELAVLKGIKHDHIASLELISLAKDELHVFFPYVDKTLHEVINPTGDPTGGRVLPEHVIRKLLHQLLDAIAYCHRRGVLHRNLKPKHLLIKTSDLEN-LDDATLQISDFALVRATGIPRRTYTMEVVTLWYRPPEILMGVRGYSSAVDIWSVGCIFAEMAQGKPLFTGISEIDQLFQIFSKLSTPTSETWPGFSSLPNYHFEFPHWKRRPLNRLFPGISDLGIDLLTKLLVYNPDQRITAEDALRHPYFSNEVPAFLPLTPKIPMDQMCYTMSRARIGPT------PEHVELFHAYLRQTELESWKEIKYLSRQKTLRPAHRSMLVDWLIEVVDVFEMCLRTAFLAVNYTDRYLDIVMVKKTQFQLLGATCLHVASKCEDVSYIGVEDLAMCADNVYTSVEVLEMEEKLLNTLNFTLSVPTALDFLNIYERMIPPIQKKTSM--LAHYLLELALQEYQFLKYLPSVVAACCLSMAMYTLDGFPMTRELVDACQYGWSDLKDCMGELQTLYSNSPSNNLAVIKKRYSKAERCQVANV 770          
BLAST of mRNA_C-tenellus_contig116.4.1 vs. uniprot
Match: A0A225WBK1_9STRA (Cyclin-F n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WBK1_9STRA)

HSP 1 Score: 616 bits (1589), Expect = 1.210e-208
Identity = 326/627 (51.99%), Postives = 424/627 (67.62%), Query Frame = 2
Query:  173 LDILLQVLSFFVSSASVDEAPITAAMA-VSRCWKKACNSTALWSKASWELETGALNWARFENQGKKAEGTEGVCFQCRDRGTNRIYAMKKARAYPKGEGVPYYMLRELAALKGVDHPNVSALCHVNLHDSKLRVFFPYIQYTLHDYLNPTSDRNGGEPLDHLTAKDLLRQLLRAVSYCHRRGVLHRNLKPKHLLIIPGRGDNKLSGATLKVSDFALVRLAGYPRRTYTSEVVTLWYRPPEILMGVRDYTPAVDMWSVGCIFVQMLRGKPLFSGVSQIDQLFQVFNKLATPTTDTWPEFVKLPNYSAPFPNWPKRDLSKIVVGLEPLGLDLVDRLLMYDPLQRITAHEALRHPYLQDLSPTSPKVPAPIAPLHVPPGIPESLGLFATYLRRQEEDLCPLPDYMGRQ-SFRAEHRSMLVDWLMEVVDVFDMCHRTAFLAVSYTDRFLSRASIPRNKFQLLGATCLHVASKCEDVSYIGIEDLASCAGRAYEPKHVLDMEEEVLKTLQFQLSVPTVLDFLNVMMEMVPEFKGLSQIRNLALYLAEISLQHFNFVLFKPSVTGSSCLVLALATLGKPHWPPRLSQAAGHTLCDLEICIRDLHEVHSAMPLSHLEVIRKRYLKIERKEVATL 2047
            +DI+L V SF V++  +        MA VS+ WK+  +  +L+         G++NW  F+N G K +GTEG C +C  R T +I AMKKAR +PKGEGVPYYMLRELA LKG+ H ++++L  ++L   +L VFFPY+  TLH+ +NPT D NGG  L     +  L QLL A++YCHRRGVLHRNLKPKHLLI     DN LS ATL++SDFALVR  G PRRTYT EVVTLWYRPPEILMGVR Y+ AVD+WSVGCIF +M +GKPLF+G+S+IDQLFQ+F+KL+TPT+DTWP F  LPNY   FP+W +R L+++  G+  LG+DL+ +LL+Y+P QRITA +ALRHPY    +P         A L + P IP     +   L   +E       Y+ RQ + R  HRSMLVDWL+EVVDVF+MC RTAFLAV+YTDR+L    + + +FQLLGATCLHVASKCEDVSYIG+EDLA CA   Y    VL+MEE++L TL F LSVPT LDFLN+   M+P  +  + +  LA YL E++LQ + F+ + PSV  + CL +A+ T+        L  A  +   DL+ C+ +L  ++S  P ++L VI+KRY K ER +VA +
Sbjct:  215 IDIILHVFSFLVTAKELQN------MAQVSKKWKELTSRRSLYRSLPSVTPEGSVNWINFKNLGIKNKGTEGTCIKCCQRSTGKILAMKKARVFPKGEGVPYYMLRELAVLKGIKHDHIASLELISLAKDELHVFFPYVDKTLHEIINPTGDPNGGRVLPEAVIRKFLHQLLDAIAYCHRRGVLHRNLKPKHLLIKTSDTDN-LSDATLQISDFALVRATGIPRRTYTMEVVTLWYRPPEILMGVRGYSSAVDIWSVGCIFAEMAQGKPLFTGISEIDQLFQIFSKLSTPTSDTWPGFSSLPNYHFEFPHWKRRPLNRLFPGISDLGIDLLTKLLVYNPDQRITAEDALRHPYFSSEAP---------AFLPLTPKIPMDQMCYTMKLESWKEI-----KYLSRQKTLRPAHRSMLVDWLIEVVDVFEMCLRTAFLAVNYTDRYLDIVMVKKTQFQLLGATCLHVASKCEDVSYIGVEDLAMCADNVYTSVEVLEMEEKLLNTLNFTLSVPTALDFLNIYERMIPPIQKKTSM--LAHYLLELALQEYQFLKYLPSVVAACCLSMAMYTMDGFPMTKELVDACQYNWSDLKECMGELQTLYSNSPSNNLAVIKKRYSKAERCQVANV 818          
BLAST of mRNA_C-tenellus_contig116.4.1 vs. uniprot
Match: A0A484E5S8_BRELC (Cyclin-F n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E5S8_BRELC)

HSP 1 Score: 618 bits (1593), Expect = 2.950e-208
Identity = 328/639 (51.33%), Postives = 433/639 (67.76%), Query Frame = 2
Query:  173 LDILLQVLSFFVSSASVDEAPITAAMAVSRCWKKACNSTALWSKASWELETGALNWARFENQGKKAEGTEGVCFQCRDRGTNRIYAMKKARAYPKGEGVPYYMLRELAALKGVDHPNVSALCHVNLHDSKLRVFFPYIQYTLHDYLNPTSDRNGGEPLDHLTAKDLLRQLLRAVSYCHRRGVLHRNLKPKHLLIIPGRGDNKLSGATLKVSDFALVRLAGYPRRTYTSEVVTLWYRPPEILMGVRDYTPAVDMWSVGCIFVQMLRGKPLFSGVSQIDQLFQVFNKLATPTTDTWPEFVKLPNYSAPFPNWPKRDLSKIVVGLEPLGLDLVDRLLMYDPLQRITAHEALRHPYLQDLSPT----SPKVPAP-----IAPLHVPPGIPESLGLFATYLRRQEEDLCPLPDYMGRQ-SFRAEHRSMLVDWLME----VVDVFDMCHRTAFLAVSYTDRFLSRASIPRNKFQLLGATCLHVASKCEDVSYIGIEDLASCAGRAYEPKHVLDMEEEVLKTLQFQLSVPTVLDFLNVMMEMVPEFKGLSQIRNLALYLAEISLQHFNFVLFKPSVTGSSCLVLALATLGKPHWPPRLSQAAGHTLCDLEICIRDLHEVHSAMPLSHLEVIRKRYLKIERKEVATL 2047
            +DI+L V SF V++ ++          VS+ W++  +  +L+   S     G++NW  F+N G K +GTEG C +C  R T +I AMKKAR +PKGEGVPYYMLRELA LKG+ H ++++L  ++L   +L VFFPY+  TLH+ +NPT D NGG  L     + LL QLL A++YCHRRGVLHRNLKPKHLLI     +  LS A L+VSDFALVR  G PRRTYT EVVTLWYRPPEILMG+R Y+ AVD+WSVGCIF +M +GKPLF+G+S+IDQLFQ+F+KL+TPT++TWP F  LPNY   FP+W +R L+++  G+  LG+DL+ +LL+Y+P QRITA +ALRHPY    +PT    +PK+P       ++     P  PE + LF  YLR+ E D      Y+ RQ + R  HRSMLVDWL+E    VVDVF+MC RTAFLAV+YTDR+L    + + +FQLLGATCLHVASKCEDVSYIG+EDLA CA   Y    VL+MEE++L TL F LSVPT LDFLN+   M+P  +  + +  LA YL E++LQ + F+ + PSV  + CL +A+ T+        L  A  +   DL+ C+ +L  ++S  P ++L VI+KRY K ER +VA +
Sbjct:  262 IDIILHVFSFLVTATNLQNMT-----QVSKKWRELISRRSLYRSLSSVTSEGSVNWINFKNLGIKNKGTEGTCIKCCQRSTGKILAMKKARVFPKGEGVPYYMLRELAVLKGIKHDHIASLELISLAKDELHVFFPYVDRTLHEIINPTGDPNGGRVLPEAVIRKLLHQLLDAIAYCHRRGVLHRNLKPKHLLIKTSDTE-VLSDAMLQVSDFALVRATGIPRRTYTMEVVTLWYRPPEILMGLRGYSSAVDIWSVGCIFAEMAQGKPLFTGISEIDQLFQIFSKLSTPTSETWPGFSSLPNYHFEFPHWKRRPLNRLFPGISDLGIDLLTKLLIYNPDQRITAEDALRHPYFSSKAPTFLPLTPKIPMDQMCYTMSRARNGP-TPEHVELFHAYLRQTEMDSWKEIKYLSRQKTLRPAHRSMLVDWLIEGLQHVVDVFEMCLRTAFLAVNYTDRYLDIVMVKKTQFQLLGATCLHVASKCEDVSYIGVEDLAMCADNVYTSVEVLEMEEKLLNTLNFTLSVPTALDFLNIYERMIPPIQKKTSM--LAHYLLELALQEYQFLKYLPSVVAACCLSMAMFTMDGFPMTKELVDACQYNWSDLKECMGELRTLYSNSPSNNLAVIKKRYSKAERCQVANV 891          
BLAST of mRNA_C-tenellus_contig116.4.1 vs. uniprot
Match: A0A0N7L3C9_PLAHL (Cyclin-F n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L3C9_PLAHL)

HSP 1 Score: 617 bits (1592), Expect = 1.450e-207
Identity = 329/636 (51.73%), Postives = 429/636 (67.45%), Query Frame = 2
Query:  173 LDILLQVLSFFVSSASVDEAPITAAMA-VSRCWKKACNSTALWSKASWELETGALNWARFENQGKKAEGTEGVCFQCRDRGTNRIYAMKKARAYPKGEGVPYYMLRELAALKGVDHPNVSALCHVNLHDSKLRVFFPYIQYTLHDYLNPTSDRNGGEPLDHLTAKDLLRQLLRAVSYCHRRGVLHRNLKPKHLLIIPGRGDNKLSGATLKVSDFALVRLAGYPRRTYTSEVVTLWYRPPEILMGVRDYTPAVDMWSVGCIFVQMLRGKPLFSGVSQIDQLFQVFNKLATPTTDTWPEFVKLPNYSAPFPNWPKRDLSKIVVGLEPLGLDLVDRLLMYDPLQRITAHEALRHPYLQD----LSPTSPKVPAP-----IAPLHVPPGIPESLGLFATYLRRQEEDLCPLPDYMGRQ-SFRAEHRSMLVDWLMEVVDVFDMCHRTAFLAVSYTDRFLSRASIPRNKFQLLGATCLHVASKCEDVSYIGIEDLASCAGRAYEPKHVLDMEEEVLKTLQFQLSVPTVLDFLNVMMEMVPEFKGLSQIRNLALYLAEISLQHFNFVLFKPSVTGSSCLVLALATLGKPHWPPRLSQAAGHTLCDLEICIRDLHEVHSAMPLSHLEVIRKRYLKIERKEVATL 2047
            +DI+L V SF V++ ++        MA VS+ WK+  +  +L+         G++NW  F+N G K +GTEG C +C  R T +I AMKKAR +PKGEGVPYYMLRELA LKG+ H ++++L  ++L   +L VFFPY+  TLH+ +NPT D NGG  L     + LL QLL A++YCHRRGVLHRNLKPKHLLI       KLS ATL++SDFALVR  G PRRTYT EVVTLWYRPPEILMGVR Y+ AVD+WSVGCIF +M +GKPLF+G+S+IDQLFQ+F+KL+TPT++TWP F  LPNY   FP+W +R L+++  G+   G+DL+ +LL Y+P QRITA +ALRHPY  D    L   +PK+P       I    + P  P  + LF  YLR+ E++      Y+ RQ + R  HRSMLVDWL+EVVDVF+MC RTAFLAV+YTDR+L    + + +FQLLGATCLHVASKCEDVSYIG+EDLA CA   Y    VL+MEE++L TL F LSVPT LDFLN+   M+P  +  + +  LA YL E++LQ + F+ + PS   + CL +A+ T+        L  A  +   DL  C+ +L  ++S  P + L VI+KRY K ER +VA +
Sbjct:  309 IDIILHVFSFLVTAKNLQN------MAQVSKKWKELTSRRSLYRTLPSVTPEGSVNWINFKNLGIKNKGTEGTCIKCCQRSTGKILAMKKARVFPKGEGVPYYMLRELAVLKGIKHDHIASLELISLARDELHVFFPYVDKTLHEIINPTGDPNGGRMLPEAVIRKLLHQLLDAIAYCHRRGVLHRNLKPKHLLI-KTTDPEKLSDATLQISDFALVRATGIPRRTYTMEVVTLWYRPPEILMGVRGYSSAVDIWSVGCIFAEMAQGKPLFTGISEIDQLFQIFSKLSTPTSETWPGFSSLPNYHFEFPHWKRRPLNRLFPGISDHGIDLLTKLLTYNPDQRITAEDALRHPYFSDRTSELLTLTPKIPMDQMCYTITRAWIGP-TPGHVALFHAYLRQTEQESWKEIKYLSRQKTLRPAHRSMLVDWLIEVVDVFEMCLRTAFLAVNYTDRYLDIVMVKKTQFQLLGATCLHVASKCEDVSYIGVEDLAMCADNVYTSVEVLEMEEKLLNTLNFTLSVPTALDFLNIYERMIPPIQKKTSM--LAHYLLELALQEYQFLKYLPSKVAACCLSMAMYTIDGFPMTKELVDACQYEWPDLRECMGELQTLYSNSPSNSLAVIKKRYSKAERCQVANV 934          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig116.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
G4YQ15_PHYSP9.420e-21352.03Cyclin-F n=20 Tax=Phytophthora TaxID=4783 RepID=G4... [more]
A0A6G0N017_9STRA2.750e-21251.72Cyclin-F n=3 Tax=Phytophthora fragariae TaxID=5398... [more]
D0NH66_PHYIT2.740e-21151.64Cyclin-F n=8 Tax=Phytophthora TaxID=4783 RepID=D0N... [more]
A0A418ASX6_9STRA4.710e-21151.34Cyclin-F n=1 Tax=Aphanomyces invadans TaxID=157072... [more]
A0A067D956_SAPPC7.330e-21051.48Cyclin-F n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A0... [more]
A0A8K1CKM1_PYTOL2.630e-20951.26Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3F2RSE3_9STRA3.690e-20951.09Cyclin-F n=1 Tax=Phytophthora kernoviae TaxID=3254... [more]
A0A225WBK1_9STRA1.210e-20851.99Cyclin-F n=1 Tax=Phytophthora megakarya TaxID=4795... [more]
A0A484E5S8_BRELC2.950e-20851.33Cyclin-F n=1 Tax=Bremia lactucae TaxID=4779 RepID=... [more]
A0A0N7L3C9_PLAHL1.450e-20751.73Cyclin-F n=1 Tax=Plasmopara halstedii TaxID=4781 R... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig116contigC-tenellus_contig116:7865..11226 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog4792.ETI54585
PFAMsCyclin_C,Cyclin_N,F-box-like,Pkinase
Model size2121
Max annot lvl4776|Peronosporales
Hectar predicted targeting categoryother localisation
Exons4
Evalue4.47e-213
EggNOG OGsCOG5024@1|root,KOG0594@1|root,KOG0594@2759|Eukaryota,KOG0654@2759|Eukaryota,3QEWF@4776|Peronosporales
DescriptionBelongs to the cyclin family
Cds size2058
COG categoryD
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig116.4.1prot_C-tenellus_contig116.4.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig116 7900..11198 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789185.6619308-UTR-C-tenellus_contig116:7864..78991680789185.6619308-UTR-C-tenellus_contig116:7864..7899Choristocarpus tenellus KU2346UTRC-tenellus_contig116 7865..7899 -
1680789185.7231936-UTR-C-tenellus_contig116:11198..112261680789185.7231936-UTR-C-tenellus_contig116:11198..11226Choristocarpus tenellus KU2346UTRC-tenellus_contig116 11199..11226 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789185.6741-CDS-C-tenellus_contig116:7899..87271680789185.6741-CDS-C-tenellus_contig116:7899..8727Choristocarpus tenellus KU2346CDSC-tenellus_contig116 7900..8727 -
1680789185.68275-CDS-C-tenellus_contig116:9456..100561680789185.68275-CDS-C-tenellus_contig116:9456..10056Choristocarpus tenellus KU2346CDSC-tenellus_contig116 9457..10056 -
1680789185.6926942-CDS-C-tenellus_contig116:10295..104481680789185.6926942-CDS-C-tenellus_contig116:10295..10448Choristocarpus tenellus KU2346CDSC-tenellus_contig116 10296..10448 -
1680789185.7096999-CDS-C-tenellus_contig116:10721..111981680789185.7096999-CDS-C-tenellus_contig116:10721..11198Choristocarpus tenellus KU2346CDSC-tenellus_contig116 10722..11198 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig116.4.1

>prot_C-tenellus_contig116.4.1 ID=prot_C-tenellus_contig116.4.1|Name=mRNA_C-tenellus_contig116.4.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=686bp
MVKRAKLASVNSDLGEENENPQRIHSRSRHKGVLRQRTGDGGHNATSNLD
ILLQVLSFFVSSASVDEAPITAAMAVSRCWKKACNSTALWSKASWELETG
ALNWARFENQGKKAEGTEGVCFQCRDRGTNRIYAMKKARAYPKGEGVPYY
MLRELAALKGVDHPNVSALCHVNLHDSKLRVFFPYIQYTLHDYLNPTSDR
NGGEPLDHLTAKDLLRQLLRAVSYCHRRGVLHRNLKPKHLLIIPGRGDNK
LSGATLKVSDFALVRLAGYPRRTYTSEVVTLWYRPPEILMGVRDYTPAVD
MWSVGCIFVQMLRGKPLFSGVSQIDQLFQVFNKLATPTTDTWPEFVKLPN
YSAPFPNWPKRDLSKIVVGLEPLGLDLVDRLLMYDPLQRITAHEALRHPY
LQDLSPTSPKVPAPIAPLHVPPGIPESLGLFATYLRRQEEDLCPLPDYMG
RQSFRAEHRSMLVDWLMEVVDVFDMCHRTAFLAVSYTDRFLSRASIPRNK
FQLLGATCLHVASKCEDVSYIGIEDLASCAGRAYEPKHVLDMEEEVLKTL
QFQLSVPTVLDFLNVMMEMVPEFKGLSQIRNLALYLAEISLQHFNFVLFK
PSVTGSSCLVLALATLGKPHWPPRLSQAAGHTLCDLEICIRDLHEVHSAM
PLSHLEVIRKRYLKIERKEVATLASLPMLQGLFPC*
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mRNA from alignment at C-tenellus_contig116:7865..11226-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig116.4.1 ID=mRNA_C-tenellus_contig116.4.1|Name=mRNA_C-tenellus_contig116.4.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3362bp|location=Sequence derived from alignment at C-tenellus_contig116:7865..11226- (Choristocarpus tenellus KU2346)
GATTAAGGTCACCTTTCAGACGTCCACAATGGTCAAGAGAGCTAAACTGG CCTCAGTGAACAGTGATCTAGGGGAAGAGAACGAAAATCCACAAAGAATT CATAGTCGTAGTAGACACAAAGGTGTATTGAGGCAACGGACTGGTGATGG TGGACACAACGCCACCAGCAACCTCGACATCTTACTGCAGGTGTTGTCCT TCTTCGTTAGCAGCGCATCGGTTGATGAAGCCCCGATCACAGCAGCCATG GCAGTGTCGCGATGTTGGAAGAAGGCGTGTAACAGCACCGCACTCTGGAG TAAAGCGTCGTGGGAGCTAGAAACTGGTGCGCTTAACTGGGCCCGTTTTG AGAACCAAGGCAAGAAGGCGGAGGGAACGGAAGGGGTGTGTTTCCAGTGT AGGGACCGAGGGACGAATCGAATTTACGCGATGAAGAAGGCAAGGGCTTA TCCCAAGGGTGAGGGAGTTCCTTACTACATGCTTCGAGAACTGGCTGCGC TTAAGGTATGGATGTAGTACGTGCTAGATCGGATTGTCCCCAAATCAACC TGACGTGCCGTTGAACTTCCAGGTGGAAAGAAAGGTGATTCCTGGCTTTT ATAGCGGCTCACTTTCCCCTCTTCATATAATAATGGAGTATGTGAGCTGC CAGAGTCACAACTCTTGTAGCTCCTTTGTAATCTTGATCTGTATGGGATG CTCTTGTATAGTATAACTTCCTTGCGATTGTAGTACACCCACTTTAGTAA TGCCCTGTTCTTGTTTCTGGCGATACAGGGAGTGGATCATCCGAATGTAT CGGCTTTGTGCCATGTCAACTTGCACGACTCCAAACTCCGGGTATTCTTC CCCTACATTCAATACACTCTCCACGACTACCTTAACCCCACGAGTGATCG CAATGGCGGCGAACCACTGGACCACCTTACGGTGAGACTACTGTTCTGGT TAAATCTTTCTGGGCAGGTAGTAATATCCACAACAAAATGAAAATTTTGT TTGCGTTATGTTTCGAAGGCATAACATGAGGTTCCTGACAATCTAGTTGT GTTCACATTTTTTTTGGCACTTTTGTCTGCACGAACTTAACATATTTCAT CCTATATAGCACAACTTCGAAATGACTTGTCCATAATGAATTCCCCGATT ATGATATCTTCTCTGCCCAGGCTAAGGACTTACTACGCCAGTTGTTACGA GCTGTGTCATACTGCCACCGCCGGGGAGTGTTGCATCGCAACCTTAAACC GAAGCACCTGCTCATTATTCCTGGAAGAGGGGACAACAAACTGAGCGGGG CAACCCTGAAAGTCTCAGATTTTGCTCTTGTTCGGCTGGCAGGTTACCCT CGACGCACGTACACCAGCGAAGTCGTGACATTGTGGTATCGGCCACCCGA GATTTTGATGGGTGTTAGGGACTACACTCCAGCTGTTGATATGTGGTCGG TTGGTTGCATCTTTGTCCAGATGCTACGGGGGAAGCCTCTCTTCTCTGGA GTCAGCCAGATCGACCAGCTTTTTCAGGTGTTCAATAAGCTGGCAACACC AACAACAGATACATGGCCAGAATTTGTCAAACTCCCCAACTACAGTGCGC CCTTCCCCAACTGGCCTAAGCGAGACCTCTCAAAGATTGTTGTTGGGCTT GAGCCCTTGGGTCTGGACTTGGTTGATCGTCTCCTAATGTACGATCCTCT CCAACGCATCACTGCTCATGAGGCGCTTCGCCATCCATATCTTCAGGATC TCTCTCCCACATCGCCTAAGGTTTGAAGAGGCTCCCCACTTACAGTCTAC CTTCCAGATCCTCGGTGTTCACCATTCAGTAATACTATCATTGGTGGTAA TTTCATATGGACTAGGTAGAGATGATGTGGGTAGAACTTGAACAGGTTTT ATGAGGTATCACTGAAAGAGAGAATAACATGCATGGGTTTAGTGGGTTCA CAGTTTCAACTAGTTTCAAGTGGCAATTTTCCACGCTGATATGACAGCTG CGTTGCGAAAGCCCTGTCACTGTAAACATACAATGCCTTTCCTTTTGAGT TGTATTTTTAGTAGTAACTATCAAGGCCAAGACTTACGCCACATGACTTC CTCCAGCCTCAACCCAAATCATTACAATCTCTTTCTCAATTGCAGTTTCC TATCAGAGTACCACCACTTTTTTTCGTCAGCCAACAGTGAAACATAGAGG TAAAACAGAGAGATAAAATCACCGCTATGTTCACATTTTTTATAGCTTTG GCTCGGGATGAAGTACGAATTGGTATAGAGCTCATTGTCCGTATTACTGT TGAAAATCCCTTGGTCACCTTTTGTACACCTCACATCTCAAGTCAGCAAG TATCATTTTTGCCTGATTTCCTTTCAGCCAGCAGCCAAAACCCTCAAGAC ATCATGAACCGATTCATGTGCTTTGTGTACATGAAGTGGTTGATTCATTT CTTTCCTTACCAATCAAATCACCCTCGCTCCTCTTGGCACAAATCCCAGG TTCCAGCACCAATTGCACCGCTCCATGTCCCACCAGGGATACCAGAGAGC CTTGGTCTCTTCGCCACTTACCTGCGAAGACAGGAGGAGGACCTCTGTCC CCTTCCAGATTACATGGGCAGGCAATCATTCAGGGCTGAACATCGTTCTA TGCTGGTAGACTGGCTGATGGAGGTGGTGGACGTATTTGACATGTGCCAT CGTACTGCCTTTCTGGCTGTGAGCTACACTGACCGTTTTCTCAGCAGGGC TTCAATCCCACGCAATAAGTTTCAGCTCCTGGGTGCCACATGCTTGCACG TGGCTTCCAAGTGTGAGGATGTGTCCTACATTGGGATCGAGGACCTAGCT AGTTGTGCTGGCCGTGCGTATGAGCCGAAGCATGTTCTTGATATGGAAGA GGAGGTTCTCAAGACTCTGCAATTCCAACTATCTGTTCCAACAGTTTTGG ATTTCCTCAATGTCATGATGGAGATGGTACCAGAGTTCAAAGGACTGTCA CAAATCCGAAACCTGGCACTGTATTTGGCTGAGATTTCACTCCAGCATTT CAATTTTGTTCTATTCAAGCCATCAGTCACAGGGAGCAGCTGCTTGGTCT TGGCATTAGCCACACTAGGGAAACCACACTGGCCTCCAAGGCTGAGTCAG GCAGCAGGGCACACCTTGTGTGACCTTGAGATTTGCATTCGAGATTTACA TGAAGTGCACAGTGCTATGCCTCTAAGTCACCTTGAGGTCATTCGCAAGC GTTACCTCAAGATAGAGAGAAAAGAGGTGGCTACTCTGGCCAGCCTTCCC ATGCTGCAGGGGCTTTTCCCTTGTTGAGCAAGACAAAGGATGTATATGGA ACTATCACAAGC
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Coding sequence (CDS) from alignment at C-tenellus_contig116:7865..11226-

>mRNA_C-tenellus_contig116.4.1 ID=mRNA_C-tenellus_contig116.4.1|Name=mRNA_C-tenellus_contig116.4.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=2058bp|location=Sequence derived from alignment at C-tenellus_contig116:7865..11226- (Choristocarpus tenellus KU2346)
ATGGTCAAGAGAGCTAAACTGGCCTCAGTGAACAGTGATCTAGGGGAAGA
GAACGAAAATCCACAAAGAATTCATAGTCGTAGTAGACACAAAGGTGTAT
TGAGGCAACGGACTGGTGATGGTGGACACAACGCCACCAGCAACCTCGAC
ATCTTACTGCAGGTGTTGTCCTTCTTCGTTAGCAGCGCATCGGTTGATGA
AGCCCCGATCACAGCAGCCATGGCAGTGTCGCGATGTTGGAAGAAGGCGT
GTAACAGCACCGCACTCTGGAGTAAAGCGTCGTGGGAGCTAGAAACTGGT
GCGCTTAACTGGGCCCGTTTTGAGAACCAAGGCAAGAAGGCGGAGGGAAC
GGAAGGGGTGTGTTTCCAGTGTAGGGACCGAGGGACGAATCGAATTTACG
CGATGAAGAAGGCAAGGGCTTATCCCAAGGGTGAGGGAGTTCCTTACTAC
ATGCTTCGAGAACTGGCTGCGCTTAAGGGAGTGGATCATCCGAATGTATC
GGCTTTGTGCCATGTCAACTTGCACGACTCCAAACTCCGGGTATTCTTCC
CCTACATTCAATACACTCTCCACGACTACCTTAACCCCACGAGTGATCGC
AATGGCGGCGAACCACTGGACCACCTTACGGCTAAGGACTTACTACGCCA
GTTGTTACGAGCTGTGTCATACTGCCACCGCCGGGGAGTGTTGCATCGCA
ACCTTAAACCGAAGCACCTGCTCATTATTCCTGGAAGAGGGGACAACAAA
CTGAGCGGGGCAACCCTGAAAGTCTCAGATTTTGCTCTTGTTCGGCTGGC
AGGTTACCCTCGACGCACGTACACCAGCGAAGTCGTGACATTGTGGTATC
GGCCACCCGAGATTTTGATGGGTGTTAGGGACTACACTCCAGCTGTTGAT
ATGTGGTCGGTTGGTTGCATCTTTGTCCAGATGCTACGGGGGAAGCCTCT
CTTCTCTGGAGTCAGCCAGATCGACCAGCTTTTTCAGGTGTTCAATAAGC
TGGCAACACCAACAACAGATACATGGCCAGAATTTGTCAAACTCCCCAAC
TACAGTGCGCCCTTCCCCAACTGGCCTAAGCGAGACCTCTCAAAGATTGT
TGTTGGGCTTGAGCCCTTGGGTCTGGACTTGGTTGATCGTCTCCTAATGT
ACGATCCTCTCCAACGCATCACTGCTCATGAGGCGCTTCGCCATCCATAT
CTTCAGGATCTCTCTCCCACATCGCCTAAGGTTCCAGCACCAATTGCACC
GCTCCATGTCCCACCAGGGATACCAGAGAGCCTTGGTCTCTTCGCCACTT
ACCTGCGAAGACAGGAGGAGGACCTCTGTCCCCTTCCAGATTACATGGGC
AGGCAATCATTCAGGGCTGAACATCGTTCTATGCTGGTAGACTGGCTGAT
GGAGGTGGTGGACGTATTTGACATGTGCCATCGTACTGCCTTTCTGGCTG
TGAGCTACACTGACCGTTTTCTCAGCAGGGCTTCAATCCCACGCAATAAG
TTTCAGCTCCTGGGTGCCACATGCTTGCACGTGGCTTCCAAGTGTGAGGA
TGTGTCCTACATTGGGATCGAGGACCTAGCTAGTTGTGCTGGCCGTGCGT
ATGAGCCGAAGCATGTTCTTGATATGGAAGAGGAGGTTCTCAAGACTCTG
CAATTCCAACTATCTGTTCCAACAGTTTTGGATTTCCTCAATGTCATGAT
GGAGATGGTACCAGAGTTCAAAGGACTGTCACAAATCCGAAACCTGGCAC
TGTATTTGGCTGAGATTTCACTCCAGCATTTCAATTTTGTTCTATTCAAG
CCATCAGTCACAGGGAGCAGCTGCTTGGTCTTGGCATTAGCCACACTAGG
GAAACCACACTGGCCTCCAAGGCTGAGTCAGGCAGCAGGGCACACCTTGT
GTGACCTTGAGATTTGCATTCGAGATTTACATGAAGTGCACAGTGCTATG
CCTCTAAGTCACCTTGAGGTCATTCGCAAGCGTTACCTCAAGATAGAGAG
AAAAGAGGTGGCTACTCTGGCCAGCCTTCCCATGCTGCAGGGGCTTTTCC
CTTGTTGA
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