mRNA_C-tenellus_contig11594.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig11594.1.1 vs. uniprot
Match: D7FLL8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLL8_ECTSI) HSP 1 Score: 204 bits (519), Expect = 1.160e-59 Identity = 100/141 (70.92%), Postives = 123/141 (87.23%), Query Frame = 1 Query: 10 LMSTFLPVGYPHSVSPEYLRFQGWNIAQDLTTYLRGVLATQAVLEGMGVGRAGSTSLAATIQWLARDGSSMVGSLLFTSLASGDFGVNLKSWRLFADVANDVGMTLELLAP--AVGGGSRFLELVCLASVFKASCGVAAGA 426 LM+TFLP GYP SV PEY+R++ W+I QDL+++LRGVLATQAVLEGMGVGRAGST LAAT+QW+ARDG+SM+G LLFTS+AS +FGVN+K+WRLFAD +ND+G+ LE+LAP A G RFL L+C+ASVFKA+CGVA GA Sbjct: 200 LMNTFLPAGYPGSVRPEYVRYRCWDILQDLSSHLRGVLATQAVLEGMGVGRAGSTPLAATLQWMARDGASMIGGLLFTSVASANFGVNIKTWRLFADTSNDIGLALEMLAPLPAFREGGRFLRLICIASVFKAACGVAGGA 340
BLAST of mRNA_C-tenellus_contig11594.1.1 vs. uniprot
Match: I2CPN2_NANGC (Uncharacterized protein (Fragment) n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPN2_NANGC) HSP 1 Score: 180 bits (456), Expect = 5.200e-54 Identity = 89/142 (62.68%), Postives = 112/142 (78.87%), Query Frame = 1 Query: 1 KMALMSTFLPVGYPHSVSPEYLRFQGWNIAQDLTTYLRGVLATQAVLEGMGVGRAGSTSLAATIQWLARDGSSMVGSLLFTSLASGDFGVNLKSWRLFADVANDVGMTLELLAPAVGGGSRFLELVCLASVFKASCGVAAGA 426 K L + FLPVG+P SV+PEYLR+Q WN+ QDL+TYLRG+LATQA+LEG+GVGR G+T LAAT+QW+ RDG+SM+ L+FTS S +FGVN KSWRLFAD D+G+TL++LAP FL +CLASV K+ CG+AAGA Sbjct: 138 KTLLHTVFLPVGFPSSVAPEYLRYQQWNVVQDLSTYLRGILATQAILEGVGVGREGATPLAATLQWITRDGASMMSGLVFTSFLSTNFGVNAKSWRLFADFMVDIGITLDMLAPLFP--KNFLLCICLASVCKSLCGIAAGA 277
BLAST of mRNA_C-tenellus_contig11594.1.1 vs. uniprot
Match: L1IND8_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IND8_GUITC) HSP 1 Score: 174 bits (442), Expect = 2.890e-51 Identity = 86/142 (60.56%), Postives = 113/142 (79.58%), Query Frame = 1 Query: 1 KMALMSTFLPVGYPHSVSPEYLRFQGWNIAQDLTTYLRGVLATQAVLEGMGVGRAGSTSLAATIQWLARDGSSMVGSLLFTSLASGDFGVNLKSWRLFADVANDVGMTLELLAPAVGGGSRFLELVCLASVFKASCGVAAGA 426 K + +TFLP GYP S+ EY ++Q +N+ QDL++ LRG+L+TQ +LEGMGVG+AG TSLAAT+QW+ARDGSSM+G LLFT+ AS FG+++K WRLFAD+ NDV + L++LAPA FL ++CL+SVFKA CGVAAGA Sbjct: 123 KRIMYATFLPSGYPASLPDEYTKYQAFNLLQDLSSNLRGILSTQKILEGMGVGKAGVTSLAATMQWMARDGSSMLGGLLFTAFASSSFGIDIKRWRLFADLINDVALLLDMLAPAYP--DLFLPIICLSSVFKAMCGVAAGA 262
BLAST of mRNA_C-tenellus_contig11594.1.1 vs. uniprot
Match: W7U3D2_9STRA (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3D2_9STRA) HSP 1 Score: 180 bits (456), Expect = 2.910e-51 Identity = 89/142 (62.68%), Postives = 112/142 (78.87%), Query Frame = 1 Query: 1 KMALMSTFLPVGYPHSVSPEYLRFQGWNIAQDLTTYLRGVLATQAVLEGMGVGRAGSTSLAATIQWLARDGSSMVGSLLFTSLASGDFGVNLKSWRLFADVANDVGMTLELLAPAVGGGSRFLELVCLASVFKASCGVAAGA 426 K L + FLPVG+P SV+PEYLR+Q WN+ QDL+TYLRG+LATQA+LEG+GVGR G+T LAAT+QW+ RDG+SM+ L+FTS S +FGVN KSWRLFAD D+G+TL++LAP FL +CLASV K+ CG+AAGA Sbjct: 133 KTLLHTVFLPVGFPSSVAPEYLRYQQWNVVQDLSTYLRGILATQAILEGVGVGREGATPLAATLQWITRDGASMMSGLVFTSFLSTNFGVNAKSWRLFADFMVDIGITLDMLAPLFP--KNFLLCICLASVCKSLCGIAAGA 272
BLAST of mRNA_C-tenellus_contig11594.1.1 vs. uniprot
Match: A0A7S0EV14_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EV14_9CRYP) HSP 1 Score: 175 bits (444), Expect = 2.390e-50 Identity = 86/142 (60.56%), Postives = 113/142 (79.58%), Query Frame = 1 Query: 1 KMALMSTFLPVGYPHSVSPEYLRFQGWNIAQDLTTYLRGVLATQAVLEGMGVGRAGSTSLAATIQWLARDGSSMVGSLLFTSLASGDFGVNLKSWRLFADVANDVGMTLELLAPAVGGGSRFLELVCLASVFKASCGVAAGA 426 K + +TFLP GYP S+ EY ++Q +N+ QDLT+ LRG+L+TQ +LEGMGVG+AG TSLAAT+QW+ARDGSSM+G LLFT+ AS FG+++K WRLFAD+ NDV + L++LAPA FL ++CL+SVFKA CGV+AGA Sbjct: 59 KRIMYATFLPSGYPASLPDEYTKYQAYNLLQDLTSNLRGILSTQKILEGMGVGKAGVTSLAATMQWMARDGSSMLGGLLFTAFASSSFGIHIKRWRLFADLINDVALLLDMLAPAYP--ELFLPIICLSSVFKAMCGVSAGA 198
BLAST of mRNA_C-tenellus_contig11594.1.1 vs. uniprot
Match: A0A813KE75_POLGL (Hypothetical protein n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KE75_POLGL) HSP 1 Score: 170 bits (431), Expect = 2.820e-48 Identity = 86/142 (60.56%), Postives = 109/142 (76.76%), Query Frame = 1 Query: 1 KMALMSTFLPVGYPHSVSPEYLRFQGWNIAQDLTTYLRGVLATQAVLEGMGVGRAGSTSLAATIQWLARDGSSMVGSLLFTSLASGDFGVNLKSWRLFADVANDVGMTLELLAPAVGGGSRFLELVCLASVFKASCGVAAGA 426 K +L FLPVGYPHSVS EY +Q W+ Q + +YLRGVLATQA+L G+GVG+ G+T+LAATI W+ +DGS MVG L F + S F VN+K+WRLFADVAN+VG+TL+LLAP G FL ++C+A+VFKA CGV+AGA Sbjct: 74 KASLAGAFLPVGYPHSVSKEYFSYQAWDTVQAMCSYLRGVLATQALLRGVGVGKEGATALAATIIWVLKDGSGMVGGLGFATFCSVGFDVNVKTWRLFADVANNVGLTLDLLAPMAG--DYFLLVICVANVFKAMCGVSAGA 213
BLAST of mRNA_C-tenellus_contig11594.1.1 vs. uniprot
Match: A0A813HLD8_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HLD8_POLGL) HSP 1 Score: 170 bits (431), Expect = 1.700e-46 Identity = 86/142 (60.56%), Postives = 109/142 (76.76%), Query Frame = 1 Query: 1 KMALMSTFLPVGYPHSVSPEYLRFQGWNIAQDLTTYLRGVLATQAVLEGMGVGRAGSTSLAATIQWLARDGSSMVGSLLFTSLASGDFGVNLKSWRLFADVANDVGMTLELLAPAVGGGSRFLELVCLASVFKASCGVAAGA 426 K +L FLPVGYPHSVS EY +Q W+ Q + +YLRGVLATQA+L G+GVG+ G+T+LAATI W+ +DGS MVG L F + S F VN+K+WRLFADVAN+VG+TL+LLAP G FL ++C+A+VFKA CGV+AGA Sbjct: 9 KASLAGAFLPVGYPHSVSKEYFSYQAWDTVQAMCSYLRGVLATQALLRGVGVGKEGATALAATIIWVLKDGSGMVGGLGFATFCSVGFDVNVKTWRLFADVANNVGLTLDLLAPMAG--DYFLLVICVANVFKAMCGVSAGA 148
BLAST of mRNA_C-tenellus_contig11594.1.1 vs. uniprot
Match: A0A482SIE4_9ARCH (RUS1 family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SIE4_9ARCH) HSP 1 Score: 157 bits (398), Expect = 3.610e-43 Identity = 81/136 (59.56%), Postives = 101/136 (74.26%), Query Frame = 1 Query: 19 TFLPVGYPHSVSPEYLRFQGWNIAQDLTTYLRGVLATQAVLEGMGVGRAGSTSLAATIQWLARDGSSMVGSLLFTSLASGDFGVNLKSWRLFADVANDVGMTLELLAPAVGGGSRFLELVCLASVFKASCGVAAGA 426 TFLP+GYP +V EY +Q WN+ QDL +YLRG++AT AVL GMGVGRA TS+ ATI W+ RDG+S++G LLFTSL+S +F N+K WRLFAD N+VG+TL++L P FL LVC+ S KA CGVAAGA Sbjct: 101 TFLPLGYPKTVPAEYTAYQAWNVIQDLCSYLRGIMATNAVLAGMGVGRADITSIQATILWVLRDGASLIGGLLFTSLSSYNFVQNIKFWRLFADSINNVGITLDMLTPYFP--LHFLPLVCVGSTCKALCGVAAGA 234
BLAST of mRNA_C-tenellus_contig11594.1.1 vs. uniprot
Match: A0A7S2TJN0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TJN0_9EUKA) HSP 1 Score: 149 bits (375), Expect = 6.200e-43 Identity = 76/137 (55.47%), Postives = 98/137 (71.53%), Query Frame = 1 Query: 16 STFLPVGYPHSVSPEYLRFQGWNIAQDLTTYLRGVLATQAVLEGMGVGRAGSTSLAATIQWLARDGSSMVGSLLFTSLASGDFGVNLKSWRLFADVANDVGMTLELLAPAVGGGSRFLELVCLASVFKASCGVAAGA 426 S FLP+GYP SV+ EYL +Q W+ Q L +YLRGVLA +A EG+GVG +T+ AAT+QW+ +DG MVGSLLF SL F N+KSWRLFAD+ N+VG+ L+++AP FL +VC A++ KA CGVAAGA Sbjct: 14 SVFLPIGYPSSVATEYLEYQAWDTVQALCSYLRGVLAAKAWFEGVGVGNTEATAAAATLQWVMKDGFGMVGSLLFASLCGPYFDTNVKSWRLFADLINNVGLFLDMIAPLTQ--EYFLLVVCFATICKAMCGVAAGA 148
BLAST of mRNA_C-tenellus_contig11594.1.1 vs. uniprot
Match: M4BWZ3_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BWZ3_HYAAE) HSP 1 Score: 149 bits (376), Expect = 9.700e-40 Identity = 74/139 (53.24%), Postives = 99/139 (71.22%), Query Frame = 1 Query: 10 LMSTFLPVGYPHSVSPEYLRFQGWNIAQDLTTYLRGVLATQAVLEGMGVGRAGSTSLAATIQWLARDGSSMVGSLLFTSLASGDFGVNLKSWRLFADVANDVGMTLELLAPAVGGGSRFLELVCLASVFKASCGVAAGA 426 + FLP GYP+SVS +Y+ FQ W+ Q + +YLRGVLATQ+VL+ +GVG +T LAA +QW+ RDGS M+G L F L F +N+K WRLFADV NDVG+TL+++AP V + E++CL+S+FK CGVA GA Sbjct: 72 IQEMFLPAGYPNSVSEDYVSFQLWDTIQAMCSYLRGVLATQSVLQSVGVGNDTATPLAAALQWVLRDGSGMIGGLTFAYLVGPKFDLNVKRWRLFADVVNDVGLTLDMIAPLVP--TLVTEVLCLSSIFKTMCGVAVGA 208 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11594.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig11594.1.1 >prot_C-tenellus_contig11594.1.1 ID=prot_C-tenellus_contig11594.1.1|Name=mRNA_C-tenellus_contig11594.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=141bp MALMSTFLPVGYPHSVSPEYLRFQGWNIAQDLTTYLRGVLATQAVLEGMGback to top mRNA from alignment at C-tenellus_contig11594:1911..3189+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig11594.1.1 ID=mRNA_C-tenellus_contig11594.1.1|Name=mRNA_C-tenellus_contig11594.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1279bp|location=Sequence derived from alignment at C-tenellus_contig11594:1911..3189+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig11594:1911..3189+ >mRNA_C-tenellus_contig11594.1.1 ID=mRNA_C-tenellus_contig11594.1.1|Name=mRNA_C-tenellus_contig11594.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=423bp|location=Sequence derived from alignment at C-tenellus_contig11594:1911..3189+ (Choristocarpus tenellus KU2346)back to top |