mRNA_C-tenellus_contig1159.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig1159.1.1 vs. uniprot
Match: A0A2P6UYV5_9CHLO (Gag-Pol poly (Fragment) n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6UYV5_9CHLO) HSP 1 Score: 249 bits (637), Expect = 9.260e-68 Identity = 150/453 (33.11%), Postives = 229/453 (50.55%), Query Frame = 2 Query: 476 EPKTVRSAHSSPECDLWDRARAEEMSGLLLNKVWVEAVLPLGRRAIDTKWIHISKINKFGEVVKHKARLVAKGFRQIEGLDYQDTFAPTPSPAFLSNVEQTLVC-----------------------YAM*EKALFVL**PPT*MIYW*LVKLMFLIW--------VRSRIEEQFSIEDFGDTEYYMGCEISHDRNARTVTISQTRYIKSVCHRFGMDGAKKRSVPHDLSRALDKS*NHPSVDESAPYREAVGSLMWASVMTRLDISNAVREVAKYSSNPKVTHWRVVKCILAYLNTCPSVGLSFGGFDTECELSAYADASYAGDWNDRRSVTGGAIMFAGGAISWTSKVQRVVALSSTESEYIXXXXXXXXLLFLRSVFEFIQPQFPRHCIDLFEDNDGACKLVRNATGSTRTK*IDVRHHFLRDLSRKEEIRVVFVGTANQRADVLTKNLP 1741 EP T++ A S P+ W A +EM+ L+ N W P G + I KW++ K + G + ++KARLV +GFRQ EG+DY + FAP + L V T YA + LF+ P V + ++ ++ ++ F D + +++G ++ DR A+T+ ++Q+R IK + ++GMD AK S P + S L K P ++ Y VGSLM+ S+ TR DI+ AV +A++ +NP HW K +L YL P +G++FG L + DA +AGD + RRS TG A +F GGAISW S++Q VA S+TE+EYI L+LR +F+ + H + + D+ A KL++N S R+K IDV HHF R+ + E+ ++ T + AD LTK +P Sbjct: 596 EPTTMKEALSGPDAAAWQLAMDDEMASLIANDTWTLCEPPHGTKPIPAKWVYKIKRDSNGNIERYKARLVVQGFRQREGIDYDEVFAPVSKYSTLRTVLSTAAAQDLDLHQLDIKTAFLNGTIDEEVYA--DAGLFISTDPSKLAYLLTYVDDILIVTPKTTSSAAIKQKLMAAFEARDLDNATFFLGMDLIRDRTAKTIKLAQSRNIKDLLSKYGMDDAKTASTPANASIKLTKQ-GTPLDTQTHSYSALVGSLMYLSICTRPDIAQAVGALARHMANPTTDHWTAAKTVLRYLTGTPDIGITFGAGSPG--LQVFCDADHAGDIDTRRSTTGYAFIFNGGAISWASRLQPTVAASTTEAEYIAAATTIKEGLWLRKLFQDLSLDL--HTVAICADSQTALKLLKNPIVSNRSKHIDVVHHFARERVARNEVTFEYISTESMVADALTKPVP 1041
BLAST of mRNA_C-tenellus_contig1159.1.1 vs. uniprot
Match: A0A2P6UZ08_9CHLO (Gag-Pol poly (Fragment) n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6UZ08_9CHLO) HSP 1 Score: 249 bits (637), Expect = 1.040e-67 Identity = 150/453 (33.11%), Postives = 229/453 (50.55%), Query Frame = 2 Query: 476 EPKTVRSAHSSPECDLWDRARAEEMSGLLLNKVWVEAVLPLGRRAIDTKWIHISKINKFGEVVKHKARLVAKGFRQIEGLDYQDTFAPTPSPAFLSNVEQTLVC-----------------------YAM*EKALFVL**PPT*MIYW*LVKLMFLIW--------VRSRIEEQFSIEDFGDTEYYMGCEISHDRNARTVTISQTRYIKSVCHRFGMDGAKKRSVPHDLSRALDKS*NHPSVDESAPYREAVGSLMWASVMTRLDISNAVREVAKYSSNPKVTHWRVVKCILAYLNTCPSVGLSFGGFDTECELSAYADASYAGDWNDRRSVTGGAIMFAGGAISWTSKVQRVVALSSTESEYIXXXXXXXXLLFLRSVFEFIQPQFPRHCIDLFEDNDGACKLVRNATGSTRTK*IDVRHHFLRDLSRKEEIRVVFVGTANQRADVLTKNLP 1741 EP T++ A S P+ W A +EM+ L+ N W P G + I KW++ K + G + ++KARLV +GFRQ EG+DY + FAP + L V T YA + LF+ P V + ++ ++ ++ F D + +++G ++ DR A+T+ ++Q+R IK + ++GMD AK S P + S L K P ++ Y VGSLM+ S+ TR DI+ AV +A++ +NP HW K +L YL P +G++FG L + DA +AGD + RRS TG A +F GGAISW S++Q VA S+TE+EYI L+LR +F+ + H + + D+ A KL++N S R+K IDV HHF R+ + E+ ++ T + AD LTK +P Sbjct: 758 EPTTMKEALSGPDAAAWQLAMDDEMASLIANDTWTLCEPPHGTKPIPAKWVYKIKRDSNGNIERYKARLVVQGFRQREGIDYDEVFAPVSKYSTLRTVLSTAAAQDLDLHQLDIKTAFLNGTIDEEVYA--DAGLFISTDPSKPAYLLTYVDDILIVTPKTTSSAAIKQKLMAAFEARDLDNATFFLGMDLIRDRTAKTIKLAQSRNIKDLLSKYGMDDAKTASTPANASIKLTKQ-GTPLDTQTHSYSALVGSLMYLSICTRPDIAQAVGALARHMANPTTDHWTAAKTVLRYLTGTPDIGITFGAGSPG--LQVFCDADHAGDIDTRRSTTGYAFIFNGGAISWASRLQPTVAASTTEAEYIAAATTIKEGLWLRKLFQDLSLDL--HTVAICADSQTALKLLKNPIVSNRSKHIDVVHHFARERVARNEVTFEYISTESMVADALTKPVP 1203
BLAST of mRNA_C-tenellus_contig1159.1.1 vs. uniprot
Match: A0A0J7KHD5_LASNI (Retrotransposon ty1-copia subclass n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KHD5_LASNI) HSP 1 Score: 245 bits (626), Expect = 4.170e-67 Identity = 155/448 (34.60%), Postives = 240/448 (53.57%), Query Frame = 2 Query: 476 EPKTVRSAHSSPECDLWDRARAEEMSGLLLNKVWVEAVLPLGRRAIDTKWIHISKINKFGEVVKHKARLVAKGFRQIEGLDYQDTFAPTPSPAFLSNVEQTLVCYAM*EKALFVL**PPT*MIYW*LVKLMFLIW---------------VRSRIEEQFSIEDFGDTEYYMGCEISHDRNARTVTISQTRYIKSVCHRFGMDGAKKRSVPHDLSRALDKS*NHPSVD----ESAPYREAVGSLMWASVMTRLDISNAVREVAKYSSNPKVTHWRVVKCILAYLNTCPSVGLSFGGFDTECELSAYADASYAGDWNDRRSVTGGAIMFAGGAISWTSKVQRVVALSSTESEYIXXXXXXXXLLFLRSVFEFIQPQFPRHCIDLFEDNDGACKLVRNATGSTRTK*IDVRHHFLRDLSRKEEIRVVFVGTANQRADVLTKNLPVRVFRQH 1762 EPKT A P+ W +A EE++ L+ N W EA LP GR+AI KW+ K GE+V++KARLVA+G+ Q +DY +T+ SP + L+ A + T +Y L + +++ V + +F + G TEY++G EI D RT+ ISQ Y+ V + G+ AK S P + SR + + + D E P+REAVGSLM+A+ ++R DI AV V++Y NP + HW+ VK I+ Y + G+ + G +T+ L Y+D+ YA D + RRS +G + AGGA+SW S+ QR+VALS+TE+EY+ +++R + E + + I++ DN G+ KL++N RTK IDVR H++R++ + +I + +V ++ Q AD+LTK LP F + Sbjct: 487 EPKTYGEAILRPDGATWQKAVDEELASLMKNGTWCEADLPPGRQAISAKWVFKLKRGPSGEIVRYKARLVARGYAQRPNVDYTETY----SPVVRYESVRALLAIAAQQDMEIAQGDVKTAFLYGTLDEEIYMTVPDGAPNAGQVTAVDKVMDYLMTEFEVT-IGSTEYFIGLEIKRDCIVRTIKISQRNYLLRVAEKIGLADAKGISTPAE-SRVYLSTTSEDNNDKRDMEKVPFREAVGSLMFAACVSRPDIMFAVSVVSRYLENPGLEHWQAVKRIIRYAKETAAYGIVYDGHNTD-GLIIYSDSDYATDPDTRRSTSGYVTVLAGGAVSWMSQRQRIVALSTTEAEYVAASDATKEAIWIRRLLESVGVN-KKGPIEMRLDNQGSIKLIKNPEFHKRTKHIDVRFHYIREIYKNGQIDIKYVPSSKQLADILTKALPKSTFESN 926
BLAST of mRNA_C-tenellus_contig1159.1.1 vs. uniprot
Match: A0A2P6V0U4_9CHLO (Gag-Pol poly n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V0U4_9CHLO) HSP 1 Score: 236 bits (603), Expect = 3.070e-64 Identity = 160/510 (31.37%), Postives = 238/510 (46.67%), Query Frame = 2 Query: 476 EPKTVRSAHSSPECDLWDRARAEEMSGLLLNKVWVEAVLPLGRRAIDTKWIHISKINKFGEVVKHKARLVAKGFRQIEGLDYQDTFAP-----------------------------------------TPSPAFLSNVEQTLVCYAM*EKALFVL**PPT*MIYW*------LVKLMF---------------------LIWV----------------RSRIEEQFSIEDFGDTEYYMGCEISHDRNARTVTISQTRYIKSVCHRFGMDGAKKRSVPHDLSRALDKS*NHPSVDESAPYREAVGSLMWASVMTRLDISNAVREVAKYSSNPKVTHWRVVKCILAYLNTCPSVGLSFGGFDTECELSAYADASYAGDWNDRRSVTGGAIMFAGGAISWTSKVQRVVALSSTESEYIXXXXXXXXLLFLRSVFEFIQPQFPRHCIDLFEDNDGACKLVRNATGSTRTK*IDVRHHFLRDLSRKEEIRVVFVGTANQRADVLTKNLPVRVF 1753 EP T++ A S P+ W A +EM+ L+ N W P G + I KW++ K + G + ++KARLV +GFRQ EG+DY + FAP +P P + + + TL C KAL+ L P W L KL F L +V + ++ F D G+ +++G ++ DR A+T+ ++Q+R IK + ++GMD AK S P + S L K P ++ Y VGSLM+ S+ TR DI+ AV +A++ +NP HW K +L YL P +G++FG L + DA +AGD + RRS TG A +F GGAISW S++Q VA S+TE+EYI L+LR +F+ + H + + D+ A KL++N S R+K IDV HHF R+ + E+ ++ T + AD LTK +P F Sbjct: 415 EPTTMKEALSGPDAAAWQLAMDDEMASLIANDTWTLCEPPHGTKPIPAKWVYKIKRDSNGNIERYKARLVVQGFRQREGIDYDEVFAPVSKYSTLRTVLSTAAAQDLDLHQLDIKTAFLNGTIDEEVYVSPPPGYTLS-KPTLCCKL--NKALYGLKQAPR---AWYQTLKAELAKLGFTASQADAGLFISTDPSKPAYLLTYVDDILIVTPKTTSSAAIKQKLMAAFEARDLGNATFFLGMDLIRDRTAKTIKLAQSRNIKDLLSKYGMDDAKTASTPANASIKLTKQ-GTPLDTQTHSYSALVGSLMYLSICTRPDIAQAVGALARHMANPTTDHWTAAKTVLRYLTGTPDIGITFGAGPPG--LQVFCDADHAGDIDTRRSTTGYAFIFNGGAISWASRLQPTVAASTTEAEYIAAATTIKEGLWLRKLFQDLSLDL--HTVAICADSQTALKLLKNPIVSNRSKHIDVVHHFARERVARNEVTFEYISTESMVADALTKPVPATKF 913
BLAST of mRNA_C-tenellus_contig1159.1.1 vs. uniprot
Match: A0A6H5JWK8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWK8_9PHAE) HSP 1 Score: 224 bits (570), Expect = 6.670e-64 Identity = 123/289 (42.56%), Postives = 173/289 (59.86%), Query Frame = 2 Query: 899 EQFSIEDFGDTEYYMGCEISHDRNARTVTISQTRYIKSVCHRFGMDGAKKRSVPHDLSRALDKS*NHPSVDESAPYREAVGSLMWASVMTRLDISNAVREVAKYSSNPKVTHWRVVKCILAYLNTCPSVGLSFG-GFDTECELSAYADASYAGDWNDRRSVTGGAIMFAGGAISWTSKVQRVVALSSTESEYIXXXXXXXXLLFLRSVFEFIQPQFPRHCIDLFEDNDGACKLVRNATGSTRTK*IDVRHHFLRDLSRKEEIRVVFVGTANQRADVLTKNLPVRVFRQH 1762 E ++ G+ ++Y GC DR A +TISQ Y K + R G++ +P R D N PSV+ P+R +GSL+W +++TR DI+NAVR VA+Y S PK+ HWR IL Y S G+SF G + L +ADA YA DRRSV+GG +M AGGAI+W SK Q+ V LS+T++EY+ +LFLR V+ F+ P+ R CI L+EDN+GA ++ ++ ++ +K IDVRHHFLR L ++E+ ++ V + Q AD LTK LP R F H Sbjct: 91 EYVPVKSLGELQWYSGCYYERDREAGRLTISQETYTKELGERHGVEWGGGIPLPTTW-RLWDSDVNEPSVEY--PFRALIGSLLWVALLTRPDIANAVRAVARYCSEPKLIHWRAALGILGYAVRTSSFGISFQRGTVSGFSLITFADADYASRAADRRSVSGGVVMCAGGAIAWFSKTQKCVTLSTTQAEYVAMADMGKEILFLREVWRFMLPKELRPCIPLYEDNEGAIQIAKHPISNSNSKHIDVRHHFLRQLVDEKEVEIIHVASQYQHADFLTKALPERDFVFH 376
BLAST of mRNA_C-tenellus_contig1159.1.1 vs. uniprot
Match: A0A2P6UYV9_9CHLO (Retrovirus-related Pol poly from transposon TNT 1-94 n=3 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6UYV9_9CHLO) HSP 1 Score: 236 bits (602), Expect = 8.180e-64 Identity = 153/504 (30.36%), Postives = 234/504 (46.43%), Query Frame = 2 Query: 476 EPKTVRSAHSSPECDLWDRARAEEMSGLLLNKVWVEAVLPLGRRAIDTKWIHISKINKFGEVVKHKARLVAKGFRQIEGLDYQDTFAPTPS------------------------PAFLSNV----------------EQTLVCY------------------------------AM*EKALFVL**PPT*MIYW*LVKLMFLIW--------VRSRIEEQFSIEDFGDTEYYMGCEISHDRNARTVTISQTRYIKSVCHRFGMDGAKKRSVPHDLSRALDKS*NHPSVDESAPYREAVGSLMWASVMTRLDISNAVREVAKYSSNPKVTHWRVVKCILAYLNTCPSVGLSFGGFDTECELSAYADASYAGDWNDRRSVTGGAIMFAGGAISWTSKVQRVVALSSTESEYIXXXXXXXXLLFLRSVFEFIQPQFPRHCIDLFEDNDGACKLVRNATGSTRTK*IDVRHHFLRDLSRKEEIRVVFVGTANQRADVLTKNLPVRVF 1753 EP T++ A S P+ W A +EM+ L+ N W P G + I KW++ K + G + ++KARLV +GFRQ EG+DY + FAP AFL+ + TL C + + LF+ P V + ++ ++ ++ F D G+ +++G ++ DR A+T+ ++Q+R IK + ++GMD AK S P + S L K P ++ Y VGSLM+ S+ TR DI+ AV +A++ +NP HW K +L YL P +G++FG L + DA +AGD + RRS TG A +F GGAISW S++Q VA S+TE+EYI L+LR +F+ + H + + D+ A KL++N S R+K IDV HHF R+ + E+ ++ T + AD LTK +P F Sbjct: 443 EPTTMKEALSGPDAAAWQLAMDDEMASLIANDTWTLCEPPHGTKPIPAKWVYKIKRDSNGNIERYKARLVVQGFRQREGIDYDEVFAPVSKYSTLRTVLSTAAAQDLDLHQLDIKTAFLNGTIDEEVYVSPPPGYTLGKPTLCCKLNKALHGLKQAPRAWYQTLKAELAKLGFTASQADAGLFISTDPSKPAYLLTYVDDILIVTPKTTSSAAIKQKLMAAFEARDLGNATFFLGMDLIRDRTAKTIKLAQSRNIKDLLSKYGMDDAKTASTPANASIKLTKQ-GTPLDTQTHSYSALVGSLMYLSICTRPDIAQAVGALARHMANPTTDHWTAAKTVLRYLTGTPDIGITFGAGSPG--LQVFCDADHAGDIDTRRSTTGYAFIFNGGAISWASRLQPTVAASTTEAEYIAAATTIKEGLWLRKLFQDLSLDL--HTVAICADSQTALKLLKNPIVSNRSKHIDVVHHFARERVARNEVTFEYISTESMVADALTKPVPATKF 941
BLAST of mRNA_C-tenellus_contig1159.1.1 vs. uniprot
Match: A0A2P6V0G0_9CHLO (Gag-Pol poly n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V0G0_9CHLO) HSP 1 Score: 237 bits (604), Expect = 1.680e-63 Identity = 161/509 (31.63%), Postives = 238/509 (46.76%), Query Frame = 2 Query: 476 EPKTVRSAHSSPECDLWDRARAEEMSGLLLNKVWVEAVLPLGRRAIDTKWIHISKINKFGEVVKHKARLVAKGFRQIEGLDYQDTFAPTPS------------------------PAFLSNV----------------EQTLVCYAM*EKALFVL**PPT*MIYW*------LVKLMF---------------------LIWV----------------RSRIEEQFSIEDFGDTEYYMGCEISHDRNARTVTISQTRYIKSVCHRFGMDGAKKRSVPHDLSRALDKS*NHPSVDESAPYREAVGSLMWASVMTRLDISNAVREVAKYSSNPKVTHWRVVKCILAYLNTCPSVGLSFGGFDTECELSAYADASYAGDWNDRRSVTGGAIMFAGGAISWTSKVQRVVALSSTESEYIXXXXXXXXLLFLRSVFEFIQPQFPRHCIDLFEDNDGACKLVRNATGSTRTK*IDVRHHFLRDLSRKEEIRVVFVGTANQRADVLTKNLPVRVF 1753 EP T++ A S P+ W A +EM+ L+ N W P G + I KW++ K + G + ++KARLV +GFRQ EG+DY + FAP AFL+ + TL C KAL+ L P W L KL F L +V + ++ F D G+ +++G ++ DR A+T+ ++Q+R IK + ++GMD AK S P + S L K P ++ Y VGSLM+ S+ TR DI+ AV +A++ +NP HW K +L YL P +G++FG L + DA++AGD + RRS TG A +F GGAISW S++Q VA S+TE+EYI L+LR +F+ + H + + D+ A KL++N S R+K IDV HHF R+ + E+ ++ T + AD LTK +P F Sbjct: 832 EPTTMKEALSGPDAAAWQLAMDDEMASLIANDTWTLCEPPHGTKPIPAKWVYKIKRDSNGNIERYKARLVVQGFRQREGIDYDEVFAPVSKYSTLRTVLSTAAAQGLDLHQLDIKTAFLNGTIDEEVYVSPPPGYTLGKPTLCCKL--NKALYGLKQAPR---AWYQTLKAELAKLGFTASQADAGLFISTDPSKPAYLLTYVDDILIVTPKTTSSAAIKQKLMAAFEARDLGNATFFLGMDLIRDRTAKTIKLAQSRNIKDLLSKYGMDDAKTASTPANASIKLTKQ-GTPLDTQTHSYSALVGSLMYLSICTRPDIAQAVGALARHMANPTTDHWAAAKTVLRYLTGTPDIGITFGAGPPG--LQVFCDANHAGDIDTRRSTTGYAFIFNGGAISWASRLQPTVAASTTEAEYIAAATTIKKGLWLRKLFQDLSLDL--HTVAICADSQTALKLLKNPIVSNRSKHIDVVHHFARERVARNEVTFEYISTESMVADALTKPVPATKF 1330
BLAST of mRNA_C-tenellus_contig1159.1.1 vs. uniprot
Match: A0A2P6VRK9_9CHLO (Gag-Pol poly n=2 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VRK9_9CHLO) HSP 1 Score: 229 bits (584), Expect = 1.980e-63 Identity = 160/509 (31.43%), Postives = 235/509 (46.17%), Query Frame = 2 Query: 476 EPKTVRSAHSSPECDLWDRARAEEMSGLLLNKVWVEAVLPLGRRAIDTKWIHISKINKFGEVVKHKARLVAKGFRQIEGLDYQDTFAPTPS------------------------PAFLSNV----------------EQTLVCYAM*EKALFVL**PPT*MIYW*------LVKLMF---------------------LIWV----------------RSRIEEQFSIEDFGDTEYYMGCEISHDRNARTVTISQTRYIKSVCHRFGMDGAKKRSVPHDLSRALDKS*NHPSVDESAPYREAVGSLMWASVMTRLDISNAVREVAKYSSNPKVTHWRVVKCILAYLNTCPSVGLSFGGFDTECELSAYADASYAGDWNDRRSVTGGAIMFAGGAISWTSKVQRVVALSSTESEYIXXXXXXXXLLFLRSVFEFIQPQFPRHCIDLFEDNDGACKLVRNATGSTRTK*IDVRHHFLRDLSRKEEIRVVFVGTANQRADVLTKNLPVRVF 1753 EP T++ A S P+ W A M+ L+ N W P G + I KW++ K + G + ++KARLV +GFRQ EG+DY + FAP AFL+ + TL C KAL+ L P W L KL F L +V + ++ F D G+ +++G ++ DR A+T+ ++Q+R IK + ++GMD AK S P + S L K P ++ Y VGSLM+ S+ TR DI+ AV +A++ +NP HW K +L YL P +G++FG L + DA +AGD + RRS TG A +F GGAISW S++Q VA S+TE+EYI L+LR +F+ + H + + D+ A KL++N S R+K IDV HHF R+ + E+ ++ T + AD LTK +P F Sbjct: 125 EPTTMKEALSGPDAAAWQLA----MASLIANDTWTLCEPPHGTKPIPAKWVYKIKRDSNGNIERYKARLVVQGFRQREGIDYDEVFAPVSKYSTLRTVLSTAAAQDLDLHQLDIKTAFLNGTIDEEVYVSPPPGYTLGKPTLCCKL--NKALYGLKQAPR---AWYQTLKAELAKLGFTASQADAGLFISTDPSKPAYLLTYVDDILIVTPKTTSSAAIKQKLMAAFEARDLGNATFFLGMDLIRDRTAKTIKLAQSRNIKDLLSKYGMDDAKTASTPANASIKLTKQ-GTPLDTQTHSYSALVGSLMYLSICTRPDIAQAVGALARHMANPTTDHWTAAKTVLRYLTGTPDIGITFGAGPPG--LQVFCDADHAGDIDTRRSTTGYAFIFNGGAISWASRLQPTVAASTTEAEYIAAATTIKEGLWLRKLFQDLSLDL--HTVAICADSQTALKLLKNPIVSNRSKHIDVVHHFARERVARNEVTFEYISTESMVADALTKPVPATKF 619
BLAST of mRNA_C-tenellus_contig1159.1.1 vs. uniprot
Match: A0A2P6UZ01_9CHLO (Gag-Pol poly n=4 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6UZ01_9CHLO) HSP 1 Score: 236 bits (603), Expect = 2.410e-63 Identity = 161/509 (31.63%), Postives = 237/509 (46.56%), Query Frame = 2 Query: 476 EPKTVRSAHSSPECDLWDRARAEEMSGLLLNKVWVEAVLPLGRRAIDTKWIHISKINKFGEVVKHKARLVAKGFRQIEGLDYQDTFAPTPS------------------------PAFLSNV----------------EQTLVCYAM*EKALFVL**PPT*MIYW*------LVKLMF---------------------LIWV----------------RSRIEEQFSIEDFGDTEYYMGCEISHDRNARTVTISQTRYIKSVCHRFGMDGAKKRSVPHDLSRALDKS*NHPSVDESAPYREAVGSLMWASVMTRLDISNAVREVAKYSSNPKVTHWRVVKCILAYLNTCPSVGLSFGGFDTECELSAYADASYAGDWNDRRSVTGGAIMFAGGAISWTSKVQRVVALSSTESEYIXXXXXXXXLLFLRSVFEFIQPQFPRHCIDLFEDNDGACKLVRNATGSTRTK*IDVRHHFLRDLSRKEEIRVVFVGTANQRADVLTKNLPVRVF 1753 EP T++ A S P+ W A +EM+ L+ N W P G + I KW + K + G + ++KARLV +GFRQ EG+DY + FAP AFL+ + TL C KAL+ L P W L KL F L +V + ++ F D G+ +++G ++ DR A+T+ ++Q+R IK + ++GMD AK S P + S L K P ++ Y VGSLM+ S+ TR DI+ AV +A++ +NP + HW K +L YL P +G++FG L + DA +AGD + RRS TG A +F GGAISW S++Q VA S+TE+EYI L+LR +F+ + H + + D+ A KL++N S R+K IDV HHF R+ + E+ ++ T + AD LTK +P F Sbjct: 894 EPTTMKEALSGPDAAAWQLAMDDEMASLIANDTWTLCEPPHGTKPIPAKWAYKIKRDSNGNIERYKARLVVQGFRQREGIDYDEVFAPVSKYSTLRTVLSTAAAQDLDLHQLDIKTAFLNGTIDEEVYVSPPPGYTLGKPTLCCKL--NKALYGLKQAPR---AWYQTLKAELAKLGFTASQADAGLFISTDPSKPAYLLTYVDDILIVTPKTTSSAAIKQKLMAAFEARDLGNATFFLGMDLIRDRTAKTIKLAQSRNIKDLLSKYGMDDAKTASTPANASIKLTKQ-GTPLDTQTHSYSALVGSLMYLSICTRPDIAQAVGALARHMANPTIDHWTAAKTVLRYLTGTPDIGITFGAGSPG--LQVFCDADHAGDIDTRRSTTGYAFIFNGGAISWASRLQPTVAASTTEAEYIAAATTIKEGLWLRKLFQDLSLDL--HTVAICADSQTALKLLKNPIVSNRSKHIDVVHHFARERVARNEVTFEYISTESMVADALTKPVPATKF 1392
BLAST of mRNA_C-tenellus_contig1159.1.1 vs. uniprot
Match: A0A0J7K988_LASNI (Integrase core domain protein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K988_LASNI) HSP 1 Score: 235 bits (600), Expect = 4.760e-63 Identity = 168/480 (35.00%), Postives = 241/480 (50.21%), Query Frame = 2 Query: 476 EPKTVRSAHSSPECDLWDRARAEEMSGLLLNKVWVEAVLPLGRRAIDTKWIHISKINKFGEVVKHKARLVAKGFRQIEGLDYQDTFAPTP------------------------SPAFLSNVEQTLVCYAM*E------------KALFVL**PPT*MIYW*LVK-------------LMF------LIWVRSRIEEQFSIEDFGDTEYYMGCEISHDRNARTVTISQTRYIKSVCHRFGMDGAKKRSVPHDLSRALDKS*NHPSVDE---SAPYREAVGSLMWASVMTRLDISNAVREVAKYSSNPKVTHWRVVKCILAYLNTCPSVGLSFGGFDTECELSAYADASYAGDWNDRRSVTGGAIMFAGGAISWTSKVQRVVALSSTESEYIXXXXXXXXLLFLRSVFEFIQPQFPRHCIDLFEDNDGACKLVRNATGSTRTK*IDVRHHFLRDLSRKEEIRVVFVGTANQRADVLTKNLP 1741 EPKT A S + W A E++ L + WV+A LP R+ I +WI K N+ G+V+++KARLVA+G+ Q EG+DY +TFAP AFL+ + + + E ++L+ L +Y + L+F + V ++++F + G +Y++G EI N V I Q Y+ V RFGM AK +VP L+ L S N DE + PYREAVGSLM+A+V++R DI AV V+K+ SNP HW+ VK IL Y+ VG+ + E +L Y+D+ YAGD + R+S +G AGGAISW S+ Q VVA+S+TE+EYI ++LR + + + + R I L DN GA KL+RN RTK IDVR+HF+R+ EI + +V + Q AD+ TK LP Sbjct: 748 EPKTYLDAMSRDDAFKWKDAIDNELNALTKMETWVDATLPKNRKPISARWIFTRKRNRQGDVIRYKARLVARGYMQREGIDYTETFAPVVRYESVRTLLAMAAINQMKIGQFDIKTAFLNGTLEEDIYMELPEGTGNEGKIVKLQRSLYGLKHEADNCVYHGSINNEVVLLALYVDDGLLFAKSDLAINNVLKYLQKEFEVT-VGKGDYFVGLEIQRS-NEGNVKIMQKAYLTRVIDRFGMTDAKGCAVPAQLNNQLVMSLNDEK-DELMTNIPYREAVGSLMFAAVVSRPDIMFAVANVSKFLSNPSREHWQAVKTILRYVKNTLDVGIEYRKTG-ETKLIGYSDSDYAGDIDTRKSTSGIVFTLAGGAISWASRRQSVVAMSTTEAEYIAASDATKEAIWLRRLLKDVGLRQERPTI-LNVDNQGAIKLIRNPELHKRTKHIDVRYHFIREKVNGGEIEIDYVKSEEQLADIFTKALP 1222 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1159.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1159.1.1 >prot_C-tenellus_contig1159.1.1 ID=prot_C-tenellus_contig1159.1.1|Name=mRNA_C-tenellus_contig1159.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=161bp MWASVMTRLDISNAVREVAKYSSNPKVTHWRVVKCILAYLNTCPSVGLSFback to top mRNA from alignment at C-tenellus_contig1159:12799..14563- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig1159.1.1 ID=mRNA_C-tenellus_contig1159.1.1|Name=mRNA_C-tenellus_contig1159.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1765bp|location=Sequence derived from alignment at C-tenellus_contig1159:12799..14563- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig1159:12799..14563- >mRNA_C-tenellus_contig1159.1.1 ID=mRNA_C-tenellus_contig1159.1.1|Name=mRNA_C-tenellus_contig1159.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=483bp|location=Sequence derived from alignment at C-tenellus_contig1159:12799..14563- (Choristocarpus tenellus KU2346)back to top |