mRNA_C-tenellus_contig11586.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig11586.2.1 vs. uniprot
Match: A0A6H5JKV4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKV4_9PHAE) HSP 1 Score: 232 bits (591), Expect = 1.560e-74 Identity = 111/172 (64.53%), Postives = 130/172 (75.58%), Query Frame = 1 Query: 58 EEPGFGLGLPGLXXXXXXXXXXXXXPLNFAMAKQVSDGIYRSGFPIACNFVFVRGLHLRSILCLCPDSVPQGSFEWAKNEGINMMLFDLGVNREPFASMSTKSMRVVMDFIADARNRPILVHCLDGKTQTGCAVGCLRRRQGWSLGAIFDEYMRFAGPRAKALDMQFIELFE 573 EEPG+GLGLPGL PLNF+M VS G++RSG+PIACNF F+R L L+SILCLCP+SV GS EWAK G++M + DLG N PF SM +MR +D+++D RNRP+LVHCL GKTQTGCA+GCLRRRQ W+LGAIFDEY RFAGP AK LDMQFIELFE Sbjct: 42 EEPGYGLGLPGLASLTLPSDGMVVPPLNFSM---VSVGVFRSGYPIACNFPFLRRLGLQSILCLCPESVLPGSLEWAKESGVSMEMCDLGENSPPFVSMPLAAMRKAVDYLSDCRNRPVLVHCLTGKTQTGCAIGCLRRRQNWALGAIFDEYTRFAGPSAKPLDMQFIELFE 210
BLAST of mRNA_C-tenellus_contig11586.2.1 vs. uniprot
Match: A0A835YPN6_9STRA (Tyrosine phosphatase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPN6_9STRA) HSP 1 Score: 192 bits (488), Expect = 6.490e-59 Identity = 92/167 (55.09%), Postives = 117/167 (70.06%), Query Frame = 1 Query: 73 GLGLPGLXXXXXXXXXXXXXPLNFAMAKQVSDGIYRSGFPIACNFVFVRGLHLRSILCLCPDSVPQGSFEWAKNEGINMMLFDLGVNREPFASMSTKSMRVVMDFIADARNRPILVHCLDGKTQTGCAVGCLRRRQGWSLGAIFDEYMRFAGPRAKALDMQFIELFE 573 GLGL GL PLN+AM VS G+YRSG+PIACNF F++GL LR++LCLCP+S +GS EWAK+ G + L + N+EPF M +++ +D IAD ++RPILVHCL GK++TGC VGCLRR QGWSL AIFDEY+RF+ LDMQFIEL++ Sbjct: 36 GLGLEGLASPSLPKQGMLIPPLNWAM---VSPGVYRSGYPIACNFNFLKGLRLRTVLCLCPESCRRGSLEWAKSSGAALHLVSVSDNKEPFVWMDEQAVAQALDLIADPKSRPILVHCLTGKSRTGCVVGCLRRLQGWSLAAIFDEYLRFSAGSGSLLDMQFIELWD 199
BLAST of mRNA_C-tenellus_contig11586.2.1 vs. uniprot
Match: A0A445DJR6_ARAHY (Tyrosine-protein phosphatase domain-containing protein n=3 Tax=Arachis TaxID=3817 RepID=A0A445DJR6_ARAHY) HSP 1 Score: 157 bits (396), Expect = 3.150e-45 Identity = 70/147 (47.62%), Postives = 100/147 (68.03%), Query Frame = 1 Query: 133 PLNFAMAKQVSDGIYRSGFPIACNFVFVRGLHLRSILCLCPDSVPQGSFEWAKNEGINMMLFDLGVNREPFASMSTKSMRVVMDFIADARNRPILVHCLDGKTQTGCAVGCLRRRQGWSLGAIFDEYMRFAGPRAKALDMQFIELFE 573 PLNFA+ V +GI+RSGFP NF F++ LHLRS++CLCP+ P+ + E+ K+ GI + F + +EPF ++ ++R + + D RN P+L+HC GK +TGC VGCLRR Q W L ++FDEY RFA +A+ D +FIELF+ Sbjct: 32 PLNFAV---VDNGIFRSGFPEPANFGFLKSLHLRSVICLCPEPYPEPNSEFLKSHGIRLFQFGIDGCKEPFVNIPEDTIREALKVVLDVRNHPVLIHCKRGKHRTGCLVGCLRRLQRWCLSSVFDEYQRFAAAKARVSDQRFIELFD 175
BLAST of mRNA_C-tenellus_contig11586.2.1 vs. uniprot
Match: A0A8J5WTL0_ZIZPA (Uncharacterized protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5WTL0_ZIZPA) HSP 1 Score: 154 bits (390), Expect = 5.610e-44 Identity = 70/147 (47.62%), Postives = 101/147 (68.71%), Query Frame = 1 Query: 133 PLNFAMAKQVSDGIYRSGFPIACNFVFVRGLHLRSILCLCPDSVPQGSFEWAKNEGINMMLFDLGVNREPFASMSTKSMRVVMDFIADARNRPILVHCLDGKTQTGCAVGCLRRRQGWSLGAIFDEYMRFAGPRAKALDMQFIELFE 573 PLNFAM V DGI+RSGFP A NF F++ L+LRSI+ LCP+ P+ + E+ GI + F + +EPF ++ + +R V+ + D RN+P+L+HC GK +TGC VGCLR+ Q W L ++FDEY RFA +A++ D +F+ELF+ Sbjct: 63 PLNFAM---VDDGIFRSGFPAAANFRFLKSLNLRSIVYLCPEPYPETNTEFLAKNGIKLHQFGIEGRKEPFVNIPDEKIREVLKVVLDERNQPLLIHCKRGKHRTGCVVGCLRKLQNWCLSSVFDEYQRFAAAKARSTDQRFMELFD 206
BLAST of mRNA_C-tenellus_contig11586.2.1 vs. uniprot
Match: A0A834SEY3_9FABA (Putative tyrosine-protein phosphatase DSP4 n=1 Tax=Senna tora TaxID=362788 RepID=A0A834SEY3_9FABA) HSP 1 Score: 153 bits (386), Expect = 1.050e-43 Identity = 71/147 (48.30%), Postives = 98/147 (66.67%), Query Frame = 1 Query: 133 PLNFAMAKQVSDGIYRSGFPIACNFVFVRGLHLRSILCLCPDSVPQGSFEWAKNEGINMMLFDLGVNREPFASMSTKSMRVVMDFIADARNRPILVHCLDGKTQTGCAVGCLRRRQGWSLGAIFDEYMRFAGPRAKALDMQFIELFE 573 PLNFAM V +GI+RSGFP A NF F++ L LRS++ LCP+ P+ + E+ K GI + F + +EPF ++ ++R + + D RN P+L+HC GK +TGC VGCLRR Q W L +IFDEY RFA +A+ D +FIELF+ Sbjct: 33 PLNFAM---VDNGIFRSGFPEAANFGFLKSLRLRSVIYLCPEPYPEANSEFLKANGIRLYQFGIDGCKEPFVNIPDDTIREALKVVLDVRNHPVLIHCKRGKHRTGCLVGCLRRMQRWCLSSIFDEYQRFAAAKARVSDQRFIELFD 176
BLAST of mRNA_C-tenellus_contig11586.2.1 vs. uniprot
Match: A0A6V7NWS2_ANACO (Tyrosine-protein phosphatase domain-containing protein n=2 Tax=Ananas comosus TaxID=4615 RepID=A0A6V7NWS2_ANACO) HSP 1 Score: 153 bits (387), Expect = 2.970e-43 Identity = 72/147 (48.98%), Postives = 97/147 (65.99%), Query Frame = 1 Query: 133 PLNFAMAKQVSDGIYRSGFPIACNFVFVRGLHLRSILCLCPDSVPQGSFEWAKNEGINMMLFDLGVNREPFASMSTKSMRVVMDFIADARNRPILVHCLDGKTQTGCAVGCLRRRQGWSLGAIFDEYMRFAGPRAKALDMQFIELFE 573 PLNFAM V G++RSGFP A NF F+R L LRS+LCLCP+ P+ + E+ GI + F + +EPF ++ ++R + + D RN PIL+HC GK +TGC VGCLR+ Q W L +IFDEY RFA +A+ D +FIELF+ Sbjct: 84 PLNFAM---VDHGVFRSGFPDAANFGFLRTLDLRSLLCLCPEPYPEANMEFLHANGIRLFQFGIDGCKEPFVNIPEDTIREALKVVLDVRNHPILIHCKRGKHRTGCLVGCLRKLQRWCLSSIFDEYRRFAAAKARISDQRFIELFD 227
BLAST of mRNA_C-tenellus_contig11586.2.1 vs. uniprot
Match: A0A0E0HMK5_ORYNI (Tyrosine-protein phosphatase domain-containing protein n=14 Tax=Oryzeae TaxID=147380 RepID=A0A0E0HMK5_ORYNI) HSP 1 Score: 152 bits (383), Expect = 8.010e-43 Identity = 69/147 (46.94%), Postives = 99/147 (67.35%), Query Frame = 1 Query: 133 PLNFAMAKQVSDGIYRSGFPIACNFVFVRGLHLRSILCLCPDSVPQGSFEWAKNEGINMMLFDLGVNREPFASMSTKSMRVVMDFIADARNRPILVHCLDGKTQTGCAVGCLRRRQGWSLGAIFDEYMRFAGPRAKALDMQFIELFE 573 PLNFAM V DGI+RSGFP A NF F++ L+LRSI+ LCP+ P+ + E+ GI + F + +EPF ++ +R + + D RN+P+L+HC GK +TGC VGCLR+ Q W L ++FDEY RFA +A++ D +F+ELF+ Sbjct: 71 PLNFAM---VDDGIFRSGFPAAANFRFLKSLNLRSIVYLCPEPYPETNAEFLAKNGIKLHQFGIEGRKEPFVNIPDDKIREALKVVLDVRNQPLLIHCKRGKHRTGCVVGCLRKLQKWCLSSVFDEYQRFAAAKARSTDQRFMELFD 214
BLAST of mRNA_C-tenellus_contig11586.2.1 vs. uniprot
Match: UPI00162E4688 (probable tyrosine-protein phosphatase DSP4 n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=UPI00162E4688) HSP 1 Score: 153 bits (387), Expect = 9.450e-43 Identity = 73/149 (48.99%), Postives = 100/149 (67.11%), Query Frame = 1 Query: 133 PLNFAMAKQVSDGIYRSGFPIACNFVFVRGLHLRSILCLCPDSVPQGSFEWAKNEGINMMLFDLGVN--REPFASMSTKSMRVVMDFIADARNRPILVHCLDGKTQTGCAVGCLRRRQGWSLGAIFDEYMRFAGPRAKALDMQFIELFE 573 PLNFAM V G+YRSGFP A N F+ LHLRS+LCLCP+ P+ + E+ + GI LF LG++ +EPF ++ +R + + D RN P+L+HC GK +TGC VGCLR+ Q W L ++FDEY RFA +A+ D++FIELF+ Sbjct: 127 PLNFAM---VDHGVYRSGFPDASNLPFLETLHLRSVLCLCPEPYPEANQEFLRAHGIR--LFQLGIDGSKEPFVNIPEDRIREALKVVLDTRNHPVLIHCKRGKHRTGCVVGCLRKLQRWCLTSVFDEYQRFAAAKARVSDLRFIELFD 270
BLAST of mRNA_C-tenellus_contig11586.2.1 vs. uniprot
Match: A0A5J9V086_9POAL (Tyrosine-protein phosphatase domain-containing protein n=3 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9V086_9POAL) HSP 1 Score: 150 bits (378), Expect = 2.480e-42 Identity = 69/147 (46.94%), Postives = 99/147 (67.35%), Query Frame = 1 Query: 133 PLNFAMAKQVSDGIYRSGFPIACNFVFVRGLHLRSILCLCPDSVPQGSFEWAKNEGINMMLFDLGVNREPFASMSTKSMRVVMDFIADARNRPILVHCLDGKTQTGCAVGCLRRRQGWSLGAIFDEYMRFAGPRAKALDMQFIELFE 573 PLNFAM V DGI+RSGFP A NF F+R L+LRSI+ LCP+ P+ + + + GI + F + +EPF + + +R + I D RN+P+L+HC GK +TGC VGCLR+ Q W L ++FDEY+ FA +A++ D +F+ELF+ Sbjct: 50 PLNFAM---VDDGIFRSGFPDAANFRFLRSLNLRSIVYLCPEPYPEENARFLEQNGIELHQFGIEGRKEPFVYIPEERIREALKVILDVRNQPVLIHCKRGKHRTGCVVGCLRKLQKWCLSSVFDEYLHFAAAKARSTDQRFMELFD 193
BLAST of mRNA_C-tenellus_contig11586.2.1 vs. uniprot
Match: A0A4S8I9S6_MUSBA (Tyrosine-protein phosphatase domain-containing protein n=2 Tax=Musa TaxID=4640 RepID=A0A4S8I9S6_MUSBA) HSP 1 Score: 152 bits (383), Expect = 2.540e-42 Identity = 70/147 (47.62%), Postives = 97/147 (65.99%), Query Frame = 1 Query: 133 PLNFAMAKQVSDGIYRSGFPIACNFVFVRGLHLRSILCLCPDSVPQGSFEWAKNEGINMMLFDLGVNREPFASMSTKSMRVVMDFIADARNRPILVHCLDGKTQTGCAVGCLRRRQGWSLGAIFDEYMRFAGPRAKALDMQFIELFE 573 PLNFAM V G++RSGFP A NF F+R LHLRSILCLCP+ P + ++ + GI + F + +EPFA++ ++R ++ + D RN P+L+HC GK +TGC VGCLR+ Q W L +IFDEY FA +A+ D F+E F+ Sbjct: 112 PLNFAM---VDYGVFRSGFPDAANFGFLRALHLRSILCLCPEPYPDANVDFLRANGIRLFQFGIDGYKEPFANIPEDTIREALEVVLDIRNHPLLIHCNRGKHRTGCVVGCLRKLQRWCLASIFDEYRCFAAAKARVSDQMFMEQFD 255 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11586.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig11586.2.1 >prot_C-tenellus_contig11586.2.1 ID=prot_C-tenellus_contig11586.2.1|Name=mRNA_C-tenellus_contig11586.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=192bp ISPQAKEDPHSREGGEENGEEPGFGLGLPGLASPSLASPSMVAPPLNFAMback to top mRNA from alignment at C-tenellus_contig11586:2969..3961+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig11586.2.1 ID=mRNA_C-tenellus_contig11586.2.1|Name=mRNA_C-tenellus_contig11586.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=993bp|location=Sequence derived from alignment at C-tenellus_contig11586:2969..3961+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig11586:2969..3961+ >mRNA_C-tenellus_contig11586.2.1 ID=mRNA_C-tenellus_contig11586.2.1|Name=mRNA_C-tenellus_contig11586.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=576bp|location=Sequence derived from alignment at C-tenellus_contig11586:2969..3961+ (Choristocarpus tenellus KU2346)back to top |