mRNA_C-tenellus_contig11581.1.3 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig11581.1.3 vs. uniprot
Match: D8LBW4_ECTSI (TsaA-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBW4_ECTSI) HSP 1 Score: 280 bits (715), Expect = 1.600e-87 Identity = 150/280 (53.57%), Postives = 194/280 (69.29%), Query Frame = 2 Query: 176 AERRLRSSKKEHEQAHGFIFRAIGDVRSPFPDRRGTPRQGSITPHARGKVVLYPRAVGYPALEGLDKFSHIWLIFVFHENTNANVNGVI----TAELGSNETKKDTSLCDSEVK------STETVQVEHRSRPTRGGYN-----------TFLAKVSPPRLNGKKVGVLGTRSPHRPNPIGLTMVKLESVDMKTNSLTVTGIDLIDGTPVIDVKPVIPYDTPSSLMVPDWVYEDLVLRRVVFSEEASTGVQACLDNLGRKRKINFYNDAQGFKEAVTEVI 952 AERRLR+ K+E E+ G+ F AIG + +PF DRRGTPRQGSITP +RGKV L VGYPAL G+ FSHIWL+FVFH+NTNA VNGV A + ++ ++ + + +V STE V+V+ + GG TFL KV PPRL GK++GVLGTRSPHRPNP+GLTMVKL+ VD+KTNS+TV+G+DL+DGTP+ID+KPV+P+D P ++ VP+WV +D LRRVVF+EEA G+ C+ RK K FY D + FK AV+EV+ Sbjct: 83 AERRLRAEKQEMEEEDGYNFTAIGTISTPFRDRRGTPRQGSITPLSRGKVTLDRGIVGYPALIGMTDFSHIWLVFVFHDNTNATVNGVAEERPAAAVAASAAGEEGAQGEGKVAPAKATGSTEGVRVKGQLERWGGGAREYRRPRHKLRQTFLTKVCPPRL-GKRIGVLGTRSPHRPNPLGLTMVKLDGVDLKTNSITVSGVDLVDGTPIIDIKPVVPHDVPRNMRVPEWVEDDPCLRRVVFTEEACEGLSKCVGEEARKSKSKFYGDIESFKAAVSEVL 361
BLAST of mRNA_C-tenellus_contig11581.1.3 vs. uniprot
Match: A0A6H5KWP5_9PHAE (TsaA-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWP5_9PHAE) HSP 1 Score: 202 bits (514), Expect = 2.630e-59 Identity = 112/218 (51.38%), Postives = 140/218 (64.22%), Query Frame = 2 Query: 377 FSHIWLIFVFHENTNANVNGVITA---------------ELGSNETKKDTSLCDSEVKSTETVQVEHRSRPTRGGYN-----------TFLAKVSPPRLNGKKVGVLGTRSPHRPNPIGLTMVKLESVDMKTNSLTVTGIDLIDGTPVIDVKPVIPYDTPSSLMVPDWVYEDLVLRRVVFSEEASTGVQACLDNLGRKRKINFYNDAQGFKEAVTEVI 952 FSHIWL+FVFH+NTNA VNGV E G E K + STE V+V+ + GG TFL KV PPRL GK++GVLGTRSPHRPNP+GLTMVKL+ VD+KTNS+TV+GIDL+DGTP+ID+KPV+P+D P ++ VP+WV +D LRRVVF+EEA G+ C+ RK K FY D + FK AV+EV+ Sbjct: 4 FSHIWLVFVFHDNTNATVNGVAEERPAASAXXXXXXXXEEGGQGERKGAPATA---TGSTEGVRVKGQLERWGGGAREYRRPRHKLRQTFLTKVCPPRL-GKRIGVLGTRSPHRPNPLGLTMVKLDGVDLKTNSITVSGIDLVDGTPIIDIKPVVPHDVPRNMRVPEWVEDDPCLRRVVFTEEACKGLSTCVGEEARKSKSKFYGDIESFKAAVSEVL 217
BLAST of mRNA_C-tenellus_contig11581.1.3 vs. uniprot
Match: A0A835YKX6_9STRA (TsaA-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKX6_9STRA) HSP 1 Score: 197 bits (501), Expect = 5.420e-57 Identity = 115/243 (47.33%), Postives = 145/243 (59.67%), Query Frame = 2 Query: 227 FIFRAIGDVRSPFPDRRGTPRQGSITPHARGKVVLYPRAVGYPALEGLDKFSHIWLIFVFHENTNANVNGVITAELGSNETKKDTSLCDSEVKSTETVQVEHRSRPTRGGYNTFLAKVSPPRLNGKKVGVLGTRSPHRPNPIGLTMVKLESVDMKTNSLTVTGIDLIDGTPVIDVKPVIPYDTPSSLMVPDWVYE-DLVLRRVVFSEEASTGVQACLDNLGRKRKINFYNDAQGFKEAVTEVI 952 F F ++ V++PF DRRGTPRQGS+ P +RG VV +P V AL+ L +FSH W++FVFHENTNA G+ E KK RPT TF AK+SPPRL G KVGV TRSPHRPNPIGLTMV++ V + + L V+G+DL+DGTPV+DVKPV+PYD P L VP+WV E D RRV +S A + A + G R FY++ Q EA +V+ Sbjct: 32 FNFVSVATVQTPFRDRRGTPRQGSVAPLSRGTVVFHPHIVSPAALDNLQQFSHAWVLFVFHENTNAR--GL--------EGKKGA------------------GRPT-----TFRAKISPPRLGGPKVGVFSTRSPHRPNPIGLTMVRILGV--QGHHLHVSGLDLVDGTPVLDVKPVVPYDVPDGLAVPEWVLEGDKERRRVTWSRAAQLALHALFERRGA-RASRFYDNPQALSEAAAQVL 238
BLAST of mRNA_C-tenellus_contig11581.1.3 vs. uniprot
Match: K3X2B7_GLOUD (TsaA-like domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X2B7_GLOUD) HSP 1 Score: 182 bits (461), Expect = 1.600e-50 Identity = 103/267 (38.58%), Postives = 158/267 (59.18%), Query Frame = 2 Query: 158 RKGRTEAERRLRSSKKEHEQAHGFIFRAIGDVRSPFPDRRGTPRQGSITPHARGKVVLYPRAVGYPALEGLDKFSHIWLIFVFHENTNANVNGVITAELGSNETKKDTSLCDSEVKSTETVQVEHRSRPTRGGYNTFLAKVSPPRLNGKKVGVLGTRSPHRPNPIGLTMVKLESVDMKTNSLTVTGIDLIDGTPVIDVKPVIPYDTPSSLMVPDWVYE--DLVLRRVVFSEEASTGVQACLDNLGRKRKINFYNDAQGFKEAVTEVI 952 R GRT AER R + + H++ HG+ F AIG V S F +RRGTPRQG++ P AR ++ + ++ +LEGL++F+H+W+IFVFHENTN + S+ KK T TF AK++PPRL GKKVG+ TR+PHRPN IGLT+VK+++V + + ++G DL+ GTPV+DVKP +P D + + P+WV E D+++R V FS+EA+ + ++ +++ FY + A+ +++ Sbjct: 59 RSGRTNAERDAREAIQRHQELHGYTFDAIGAVESCFAERRGTPRQGALVPDARARIA-FRTSIPPASLEGLEQFTHLWVIFVFHENTN------VAKASSSSGAKKTT---------------------------TFPAKIAPPRLGGKKVGLFSTRTPHRPNSIGLTVVKIDAVHERY--IDISGHDLVHGTPVLDVKPYVPADCVADHVCPEWVSEKSDVLVRIVEFSDEATQALATMIE----RQQSTFYKSVDDIQAAIKQML 285
BLAST of mRNA_C-tenellus_contig11581.1.3 vs. uniprot
Match: A0A2D4BFG7_PYTIN (TsaA-like domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BFG7_PYTIN) HSP 1 Score: 179 bits (454), Expect = 1.730e-49 Identity = 107/267 (40.07%), Postives = 150/267 (56.18%), Query Frame = 2 Query: 158 RKGRTEAERRLRSSKKEHEQAHGFIFRAIGDVRSPFPDRRGTPRQGSITPHARGKVVLYPRAVGYPALEGLDKFSHIWLIFVFHENTNANVNGVITAELGSNETKKDTSLCDSEVKSTETVQVEHRSRPTRGGYNTFLAKVSPPRLNGKKVGVLGTRSPHRPNPIGLTMVKLESVDMKTNSLTVTGIDLIDGTPVIDVKPVIPYDTPSSLMVPDWVYE--DLVLRRVVFSEEASTGVQACLDNLGRKRKINFYNDAQGFKEAVTEVI 952 R GRT AER R + + ++A G+ F +IG V+S F +RRGTPRQ ++ P ARG++ L P + ALE LD+FSH+W++FVFHENTN VK T G N F AK++PPRL G+KVG+ TR+PHRPN IGLT+VK+E+V K + ++G DL++GTPV+DVKP +P D + + P WV + D + R V FSE A QA L + + + FY A+ +++ Sbjct: 62 RSGRTNAEREAREAVQRQQEADGYQFHSIGHVQSCFAERRGTPRQSALVPDARGRIKLRPH-IPPAALECLDQFSHMWVVFVFHENTNV-------------------------VKQT--------------GKNKFAAKIAPPRLGGQKVGLFSTRTPHRPNSIGLTVVKIEAVYGKY--IEISGHDLVNGTPVLDVKPYVPMDMVPNHVCPHWVTDPSDALPRPVEFSESA----QAALHEMSERGQFRFYTSLDDIVAAIKQML 282
BLAST of mRNA_C-tenellus_contig11581.1.3 vs. uniprot
Match: T0PS40_SAPDV (TsaA-like domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0PS40_SAPDV) HSP 1 Score: 179 bits (453), Expect = 1.860e-49 Identity = 101/267 (37.83%), Postives = 152/267 (56.93%), Query Frame = 2 Query: 158 RKGRTEAERRLRSSKKEHEQAHGFIFRAIGDVRSPFPDRRGTPRQGSITPHARGKVVLYPRAVGYPALEGLDKFSHIWLIFVFHENTNANVNGVITAELGSNETKKDTSLCDSEVKSTETVQVEHRSRPTRGGYNTFLAKVSPPRLNGKKVGVLGTRSPHRPNPIGLTMVKLESVDMKTNSLTVTGIDLIDGTPVIDVKPVIPYDTPSSLMVPDWVYE--DLVLRRVVFSEEASTGVQACLDNLGRKRKINFYNDAQGFKEAVTEVI 952 R GRT AER R ++ G+ F IG V S F DRRGTPRQG++ P ++G++ L +V +LE LD+FSH+W++FVFHENTN S+ T+ AK++PPRL GKKVG+ TR+PHRPN IGLT+VKL++V +T + ++G D + GTP++DVKP +PYD L P+WV E D++ R V F++EA ++A +++ +++ FY+ K+A+ +++ Sbjct: 55 RLGRTNAERDARLIAQQQLDRDGYNFEPIGSVESCFADRRGTPRQGALVPASKGRIRLVT-SVPPASLECLDQFSHVWVLFVFHENTNV-------------------------------------SKVAANKKTTYPAKIAPPRLGGKKVGLFSTRTPHRPNSIGLTVVKLDAVYDRT--IEISGHDFVHGTPILDVKPYVPYDRVDDLECPEWVMERHDILPRPVEFADEALAQLEAAINS----KRLEFYHSVDELKDAIAQIL 277
BLAST of mRNA_C-tenellus_contig11581.1.3 vs. uniprot
Match: A0A7S2WIR7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WIR7_9STRA) HSP 1 Score: 176 bits (447), Expect = 6.030e-49 Identity = 102/222 (45.95%), Postives = 128/222 (57.66%), Query Frame = 2 Query: 158 RKGRTEAERRLRSSKKEHEQAHGFIFRAIGDVRSPFPDRRGTPRQGSITPHARGKVVLYPRAVGYPALEGLDKFSHIWLIFVFHENTNANVNGVITAELGSNETKKDTSLCDSEVKSTETVQVEHRSRPTRG----GYNTFL--AKVSPPRLNGKKVGVLGTRSPHRPNPIGLTMVKLESVDMKTNSLTVTGIDLIDGTPVIDVKPVIPYDTPSSLMVPDWV 805 R GRT AE+ LR + + G+ AIG V SPF DRRGTPRQG++ P A G VVL P V LEGL+ FSH+W++F+FHENTN H+ +P RG G F AKV+PPRL GKKVGV TRSPHRPNP+GLT+ +L SV+ ++ + G+DL+DGTPV+D+KP IPYD L+VP WV Sbjct: 33 RAGRTAAEKALRERVQAKHASEGYQMHAIGTVASPFADRRGTPRQGTVAPAAEGSVVLAPD-VPQATLEGLEGFSHVWVLFIFHENTNL-----------------------------------HQKQPRRGSSASGGPRFHCPAKVTPPRL-GKKVGVFSTRSPHRPNPVGLTVCRLLSVNTAKRTVVLGGVDLVDGTPVLDLKPYIPYDAVDQLVVPAWV 217
BLAST of mRNA_C-tenellus_contig11581.1.3 vs. uniprot
Match: A0A6G0XRC5_9STRA (TsaA-like domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XRC5_9STRA) HSP 1 Score: 177 bits (449), Expect = 1.380e-48 Identity = 100/267 (37.45%), Postives = 155/267 (58.05%), Query Frame = 2 Query: 158 RKGRTEAERRLRSSKKEHEQAHGFIFRAIGDVRSPFPDRRGTPRQGSITPHARGKVVLYPRAVGYPALEGLDKFSHIWLIFVFHENTNANVNGVITAELGSNETKKDTSLCDSEVKSTETVQVEHRSRPTRGGYNTFLAKVSPPRLNGKKVGVLGTRSPHRPNPIGLTMVKLESVDMKTNSLTVTGIDLIDGTPVIDVKPVIPYDTPSSLMVPDWVYE--DLVLRRVVFSEEASTGVQACLDNLGRKRKINFYNDAQGFKEAVTEVI 952 R GRT AER R ++ G+ F IG V S F DRRGTPRQG++ P ++ ++ L ++ ALE LD+FSH+W++FVFHENTN ++ + T+ AK++PPRL GKKVG+ TR+PHRPN IGLT+VK+++V + + ++G DL+DGTPV+DVKP +PYD +SL+ P+WV E D+V R V+F++EA ++ + ++ FY++++ +E + +++ Sbjct: 68 RSGRTNAERDARLLAQKQLDKEGYNFEPIGTVSSCFADRRGTPRQGALVPGSKARIEL-KSSISPTALECLDQFSHMWVLFVFHENTNL-------------------------------------AKVSTHKIATYPAKIAPPRLGGKKVGLFSTRTPHRPNSIGLTVVKVDAVSGQF--VDISGHDLVDGTPVLDVKPYVPYDQVNSLVCPEWVAEKHDIVARPVIFTDEALAQLELAMPSM------RFYSNSRELRETIEQIL 288
BLAST of mRNA_C-tenellus_contig11581.1.3 vs. uniprot
Match: A0A1V9YJM3_9STRA (TsaA-like domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YJM3_9STRA) HSP 1 Score: 172 bits (436), Expect = 6.100e-47 Identity = 102/266 (38.35%), Postives = 147/266 (55.26%), Query Frame = 2 Query: 158 RKGRTEAERRLRSSKKEHEQAHGFIFRAIGDVRSPFPDRRGTPRQGSITPHARGKVVLYPRAVGYPALEGLDKFSHIWLIFVFHENTNANVNGVITAELGSNETKKDTSLCDSEVKSTETVQVEHRSRPTRGGYNTFLAKVSPPRLNGKKVGVLGTRSPHRPNPIGLTMVKLESVDMKTNSLTVTGIDLIDGTPVIDVKPVIPYDTPSSLMVPDWVYEDL-VLRRVVFSEEASTGVQACLDNLGRKRKINFYNDAQGFKEAVTEVI 952 R GRT AER R+ ++ G+ F IG V S F DRRGTPRQGS+ P ++ ++ L +V +LE LD+FSH+W++FVFHENTN S+ T+ AK++PPRL GKKVG+ TR+PHRPN IGLT+VKL++V + + ++G DL+ GTP++DVKP +PYD L+ PDWV E V R + F++EA ++A + +K+ FY K A+ +++ Sbjct: 56 RHGRTNAERDARAIAQQQLDRDGYNFEPIGTVESCFADRRGTPRQGSLVPASKARIQLKV-SVPPASLECLDQFSHVWVLFVFHENTNL-------------------------------------SKVAAQKKTTYPAKIAPPRLGGKKVGLFSTRTPHRPNSIGLTVVKLDAVHDRV--IEISGHDLVHGTPILDVKPYVPYDKVPDLVCPDWVNERHDVPRPIEFTDEALEQLEAAVAG----KKLEFYQTLDELKAAIAQIL 277
BLAST of mRNA_C-tenellus_contig11581.1.3 vs. uniprot
Match: F0W0C9_9STRA (Uncharacterized protein AlNc14C4G572 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W0C9_9STRA) HSP 1 Score: 171 bits (432), Expect = 4.430e-46 Identity = 103/265 (38.87%), Postives = 147/265 (55.47%), Query Frame = 2 Query: 158 RKGRTEAERRLRSSKKEHEQAHGFIFRAIGDVRSPFPDRRGTPRQGSITPHARGKVVLYPRAVGYPALEGLDKFSHIWLIFVFHENTNANVNGVITAELGSNETKKDTSLCDSEVKSTETVQVEHRSRPTRGGYNTFLAKVSPPRLNGKKVGVLGTRSPHRPNPIGLTMVKLESVDMKTNSLTVTGIDLIDGTPVIDVKPVIPYDTPSSLMVPDWVYEDLVLRRVVFSEEASTGVQACLDNLGRKRKINFYNDAQGFKEAVTEVI 952 R GRT AER+L +E + G+ F AI +V S F DRRGTPRQG + P +R ++ + R+V +LE LD+FSHIW++F FH NTN + K+D G N+F AK++PPRL G KVGVL TRSPHRPN +GL++VK+E+V + ++V+G DL+ TPV+D+KP IP D P WV E V VVF+ A ++A +D R+ FY+ ++A+ +++ Sbjct: 69 RTGRTSAERKLCLRIQEVQAKTGYRFHAIANVDSCFSDRRGTPRQGHLVPSSRA-IIRFQRSVPPASLECLDEFSHIWVLFTFHGNTNLS--------------KQD------------------------GAANSFTAKIAPPRLGGMKVGVLSTRSPHRPNSLGLSLVKIENVCVTKREISVSGHDLVHQTPVLDIKPYIPADCKPDFRCPTWVSESGVDCPVVFAPVALEALRAIMD----ARRCRFYDKLADAQDAIKQML 290 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11581.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig11581.1.3 >prot_C-tenellus_contig11581.1.3 ID=prot_C-tenellus_contig11581.1.3|Name=mRNA_C-tenellus_contig11581.1.3|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=158bp MVKLESVDMKTNSLTVTGIDLIDGTPVIDVKPVIPYDTPSSLMVPDWVYEback to top mRNA from alignment at C-tenellus_contig11581:51..4690- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig11581.1.3 ID=mRNA_C-tenellus_contig11581.1.3|Name=mRNA_C-tenellus_contig11581.1.3|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4640bp|location=Sequence derived from alignment at C-tenellus_contig11581:51..4690- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig11581:51..4690- >mRNA_C-tenellus_contig11581.1.3 ID=mRNA_C-tenellus_contig11581.1.3|Name=mRNA_C-tenellus_contig11581.1.3|organism=Choristocarpus tenellus KU2346|type=CDS|length=474bp|location=Sequence derived from alignment at C-tenellus_contig11581:51..4690- (Choristocarpus tenellus KU2346)back to top |