mRNA_C-tenellus_contig1157.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig1157.1.1 vs. uniprot
Match: A0A6H5JCH2_9PHAE (Cyclic nucleotide-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JCH2_9PHAE) HSP 1 Score: 314 bits (804), Expect = 1.980e-91 Identity = 147/188 (78.19%), Postives = 169/188 (89.89%), Query Frame = 3 Query: 747 RVPYFSYLSMLHLYETLGWWTAGSEVRKVHFAEEWNELQHLKIMESLGGDERWSDRFMARHAAILYYWVLNLGYLISPFLAYNFSELLESHAVDTYSEFIEANKDLLKSLPPTKQALEYYTAGDMYLFDEFQTARPAYSRRPIIRSLYDVFRNIRDDEVEHVKTMFACERGERNIVSPNAAVALPPWA 1310 R+PYFSYLSML LYETLGWW+ +EVRKVHFAEE+NE+QHL+IMESLGGD RWSDRF+ARHAAI+Y++VL LGYL+SPFLAYNFSEL+ESHAVDTY+EF EANK+LL+SLPPT QAL+YY GDMYLFDEFQT+RPA+SRRP I++LYDVF IRDDE+EHVKTMFACERG + SPNAA A P WA Sbjct: 432 RMPYFSYLSMLFLYETLGWWSGAAEVRKVHFAEEYNEMQHLRIMESLGGDTRWSDRFLARHAAIIYFFVLILGYLVSPFLAYNFSELIESHAVDTYTEFAEANKELLQSLPPTPQALDYYHGGDMYLFDEFQTSRPAFSRRPRIKNLYDVFSCIRDDELEHVKTMFACERGTGTLPSPNAAAATPRWA 619
BLAST of mRNA_C-tenellus_contig1157.1.1 vs. uniprot
Match: A0A7S3XP24_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XP24_HETAK) HSP 1 Score: 284 bits (726), Expect = 8.840e-84 Identity = 133/197 (67.51%), Postives = 160/197 (81.22%), Query Frame = 3 Query: 747 RVPYFSYLSMLHLYETLGWWTAGSEVRKVHFAEEWNELQHLKIMESLGGDERWSDRFMARHAAILYYWVLNLGYLISPFLAYNFSELLESHAVDTYSEFIEANKDLLKSLPPTKQALEYYTAGDMYLFDEFQTARPAYSRRPIIRSLYDVFRNIRDDEVEHVKTMFACERGERNIVSPNAAVALPPWALDANSENEE 1337 R+PYFSYLSMLHLYETLGWWT G EVRKVHFAEEWNEL+HLKIM+SLGGD W+DRF ARHAAILYYW+LNL + +SP AYNFSEL+E HAVD+Y +F+E N++LL+ LPP K A++YY +GDMYLFDEFQT+R SRRP I +LYDVFRNI +DE+EHVKT+ AC+ + N+ SPN A A W++ E EE Sbjct: 152 RMPYFSYLSMLHLYETLGWWTVGEEVRKVHFAEEWNELRHLKIMQSLGGDAAWADRFFARHAAILYYWLLNLMFSVSPRAAYNFSELIEFHAVDSYGQFLEENEELLRRLPPPKAAVDYYMSGDMYLFDEFQTSRAPRSRRPKINNLYDVFRNIMEDELEHVKTVTACQISD-NLGSPNLAAADGTWSIQDGEEQEE 347
BLAST of mRNA_C-tenellus_contig1157.1.1 vs. uniprot
Match: A0A4D9CVG3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVG3_9STRA) HSP 1 Score: 290 bits (743), Expect = 1.410e-83 Identity = 134/188 (71.28%), Postives = 159/188 (84.57%), Query Frame = 3 Query: 747 RVPYFSYLSMLHLYETLGWWTAGSEVRKVHFAEEWNELQHLKIMESLGGDERWSDRFMARHAAILYYWVLNLGYLISPFLAYNFSELLESHAVDTYSEFIEANKDLLKSLPPTKQALEYYTAGDMYLFDEFQTARPAYSRRPIIRSLYDVFRNIRDDEVEHVKTMFACERGERNIVSPNAAVALPPWA 1310 R+PYFSY+SMLHLYETLGWWT G++VR+VHFAEEWNEL HL+IMESLGGD RW DRF+ARH+AI YYWVLNL +LISP LAYNFSEL+ESHAVDTYS+F++ N+DLL+ LP + AL+YY GD+Y+FDEFQT RP +RRP+IRSLYDVF IRDDE EHVKT+ AC+ + I+SPNAA A WA Sbjct: 407 RMPYFSYISMLHLYETLGWWTIGTDVRRVHFAEEWNELHHLQIMESLGGDARWLDRFLARHSAIAYYWVLNLMFLISPRLAYNFSELIESHAVDTYSQFLDENEDLLRRLPAPRVALDYYVMGDLYMFDEFQTTRPVQTRRPLIRSLYDVFSAIRDDESEHVKTINACQVADEVILSPNAAAAHAAWA 594
BLAST of mRNA_C-tenellus_contig1157.1.1 vs. uniprot
Match: A0A7S3XP26_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XP26_HETAK) HSP 1 Score: 280 bits (717), Expect = 3.580e-82 Identity = 131/194 (67.53%), Postives = 158/194 (81.44%), Query Frame = 3 Query: 747 RVPYFSYLSMLHLYETLGWWTAGSEVRKVHFAEEWNELQHLKIMESLGGDERWSDRFMARHAAILYYWVLNLGYLISPFLAYNFSELLESHAVDTYSEFIEANKDLLKSLPPTKQALEYYTAGDMYLFDEFQTARPAYSRRPIIRSLYDVFRNIRDDEVEHVKTMFACERGERNIVSPNAAVALPPWALDANSE 1328 R+PYFSYLSMLHLYETLGWWT G EVRKVHFAEEWNEL+HLKIM+SLGGD W+DRF ARHAAILYYW+LNL + +SP AYNFSEL+E HAVD+Y +F+E N++LL+ LPP K A++YY +GDMYLFDEFQT+R SRRP I +LYDVFRNI +DE+EHVKT+ AC+ + N+ SPN A A W++ E Sbjct: 152 RMPYFSYLSMLHLYETLGWWTVGEEVRKVHFAEEWNELRHLKIMQSLGGDAAWADRFFARHAAILYYWLLNLMFSVSPRAAYNFSELIEFHAVDSYGQFLEENEELLRRLPPPKAAVDYYMSGDMYLFDEFQTSRAPRSRRPKINNLYDVFRNIMEDELEHVKTVTACQISD-NLGSPNLAAADGTWSIQDGEE 344
BLAST of mRNA_C-tenellus_contig1157.1.1 vs. uniprot
Match: A0A6U1QBH7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1QBH7_9STRA) HSP 1 Score: 280 bits (716), Expect = 2.700e-81 Identity = 136/217 (62.67%), Postives = 163/217 (75.12%), Query Frame = 3 Query: 669 WFAFGHDT*MCVHINVCASNVD-------EL*DRVPYFSYLSMLHLYETLGWWTAGSEVRKVHFAEEWNELQHLKIMESLGGDERWSDRFMARHAAILYYWVLNLGYLISPFLAYNFSELLESHAVDTYSEFIEANKDLLKSLPPTKQALEYYTAGDMYLFDEFQTARPAYSRRPIIRSLYDVFRNIRDDEVEHVKTMFACERGERNIVSPNAAVAL 1298 WF G +CV ++ E R+PYFSY+SMLHLYETLGWW+ G EVRKVHFAEEWNE++HL IME+LGGD+ W DRF ARHAAI+YYW+LNL YL SP L+YNFSEL+E HAVDTY EF+ NK+LLKSLPP +A+EYY A DMY+FDEFQT R A SRRP++R+LYDVF NIR DE EHV+TMFAC+ E I SPN+ + + Sbjct: 257 WFLLGPYYALCVVLDTLFKGRPIQRFWCLETVARMPYFSYISMLHLYETLGWWSQGVEVRKVHFAEEWNEMRHLAIMEALGGDQIWLDRFFARHAAIVYYWLLNLIYLWSPRLSYNFSELIEWHAVDTYEEFVIQNKELLKSLPPPIEAMEYYMANDMYMFDEFQTGRKAGSRRPVVRTLYDVFDNIRADEYEHVRTMFACQEHESFIESPNSVLVV 473
BLAST of mRNA_C-tenellus_contig1157.1.1 vs. uniprot
Match: A0A835YR99_9STRA (Alternative oxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR99_9STRA) HSP 1 Score: 285 bits (728), Expect = 4.000e-81 Identity = 134/205 (65.37%), Postives = 158/205 (77.07%), Query Frame = 3 Query: 747 RVPYFSYLSMLHLYETLGWWTAGSEVRKVHFAEEWNELQHLKIMESLGGDERWSDRFMARHAAILYYWVLNLGYLISPFLAYNFSELLESHAVDTYSEFIEANKDLLKSLPPTKQA------------------LEYYTAGDMYLFDEFQTARPAYSRRPIIRSLYDVFRNIRDDEVEHVKTMFACERGERNIVSPNAAVALPPW 1307 R+PYFSYLSMLHLYETLGWW+ G+EVR+VHF+EEWNE+ HLKIME+LGGD RWSDRF+ARHAAI+YYW LN+ +L SPFLAYNFS+L+ESHAVDTY EF+E NK+LL+SLPP +A + YY GDMY+FDEFQ+ PA++RRP+I SLYDVF NIRDDE EHVKTMFACER + SPN A W Sbjct: 364 RMPYFSYLSMLHLYETLGWWSVGTEVRRVHFSEEWNEMNHLKIMEALGGDMRWSDRFLARHAAIVYYWALNILFLFSPFLAYNFSKLIESHAVDTYGEFVETNKELLQSLPPPPEAXXXXXXXXXXXXXXXXXAVAYYVGGDMYMFDEFQSGTPAFTRRPVINSLYDVFCNIRDDEREHVKTMFACEREGELVRSPNELAARAIW 568
BLAST of mRNA_C-tenellus_contig1157.1.1 vs. uniprot
Match: A0A7S1KCS9_9ALVE (Hypothetical protein n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1KCS9_9ALVE) HSP 1 Score: 275 bits (703), Expect = 4.850e-81 Identity = 133/191 (69.63%), Postives = 153/191 (80.10%), Query Frame = 3 Query: 747 RVPYFSYLSMLHLYETLGWWTAGSEVRKVHFAEEWNELQHLKIMESLGGDERWSDRFMARHAAILYYWVLNLGYLISPFLAYNFSELLESHAVDTYSEFIEANKDLLKSLPPTKQALEYYTAGDMYLFDEFQTARPAYSRRPIIRSLYDVFRNIRDDEVEHVKTMFACERGERNIVSPNAAVA---LPPWA 1310 R+PYF+Y+SMLHLYETLGWW G EVR+VHFAEEWNE+ HL IMESLGGD+ W DRF+ARHAAI+YYWV+ +LISP AYNFSEL+E HA DTY+EF+E NKD LK LP ALEYY GD+YLFDEFQ++RPA SRRP I +LYDVF IRDDE+EHVKTM AC+R E + SPNAA A L PWA Sbjct: 172 RMPYFAYISMLHLYETLGWWRVGVEVRRVHFAEEWNEMHHLFIMESLGGDQAWFDRFLARHAAIVYYWVVIFLFLISPTWAYNFSELVEWHATDTYAEFVEQNKDRLKRLPAPAVALEYYNGGDLYLFDEFQSSRPAESRRPNIDNLYDVFVTIRDDELEHVKTMSACQRLESAMKSPNAAAAAAGLAPWA 362
BLAST of mRNA_C-tenellus_contig1157.1.1 vs. uniprot
Match: A0A0G4F067_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F067_VITBC) HSP 1 Score: 281 bits (720), Expect = 4.400e-80 Identity = 136/201 (67.66%), Postives = 160/201 (79.60%), Query Frame = 3 Query: 747 RVPYFSYLSMLHLYETLGWWTAGSEVRKVHFAEEWNELQHLKIMESLGGDERWSDRFMARHAAILYYWVLNLGYLISPFLAYNFSELLESHAVDTYSEFIEANKDLLKSLPPTKQALEYYTAGDMYLFDEFQTARPAYSRRPIIRSLYDVFRNIRDDEVEHVKTMFACERGERNIV-SPNAAVA---LPPWALDANSENEE 1337 R+PYF+Y+SMLHLYETLGWW G+EVRKVHFAEEWNE+ HL IMESLGGD+ W DRF+ARHAAI+YYWVL L +LISP AYNFSEL+E HAVDTY +F+ NK +LK LP A+EYY +GD+Y+FDEFQT+RPA SRRP I +LYDVF IRDDE+EHVKTM AC+R E +V SPNAA A + PWA EN+E Sbjct: 462 RMPYFAYISMLHLYETLGWWRVGTEVRKVHFAEEWNEMHHLFIMESLGGDQAWLDRFLARHAAIVYYWVLILLFLISPTWAYNFSELIEWHAVDTYGQFVSQNKQILKRLPAPAVAMEYYKSGDLYMFDEFQTSRPAQSRRPQINNLYDVFTTIRDDELEHVKTMSACQRLEAAMVMSPNAAAAAAGMAPWAESDREENQE 662
BLAST of mRNA_C-tenellus_contig1157.1.1 vs. uniprot
Match: A0A0G4EY52_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EY52_VITBC) HSP 1 Score: 275 bits (702), Expect = 1.800e-79 Identity = 133/191 (69.63%), Postives = 152/191 (79.58%), Query Frame = 3 Query: 747 RVPYFSYLSMLHLYETLGWWTAGSEVRKVHFAEEWNELQHLKIMESLGGDERWSDRFMARHAAILYYWVLNLGYLISPFLAYNFSELLESHAVDTYSEFIEANKDLLKSLPPTKQALEYYTAGDMYLFDEFQTARPAYSRRPIIRSLYDVFRNIRDDEVEHVKTMFACERGERNIVSPNAAVA---LPPWA 1310 R+PY SY+SMLHLYETLGWW G EVR+VHFAEEWNE+ HL IMESLGGD+ W DRF+ARHAAI+YYWV+ +LISP AYNFSEL+E HA DTY+EF+E NKD LK LP ALEYY GD+YLFDEFQ++RPA SRRP I +LYDVF IRDDE+EHVKTM AC+R E + SPNAA A L PWA Sbjct: 285 RIPYMSYISMLHLYETLGWWRVGVEVRRVHFAEEWNEMHHLFIMESLGGDQAWFDRFLARHAAIVYYWVVIFLFLISPTWAYNFSELVEWHATDTYAEFVEQNKDRLKRLPAPAVALEYYNGGDLYLFDEFQSSRPAESRRPNIDNLYDVFVTIRDDELEHVKTMSACQRLESAMKSPNAAAAAAGLAPWA 475
BLAST of mRNA_C-tenellus_contig1157.1.1 vs. uniprot
Match: A0A1Y1HI87_KLENI (Ubiquinol oxidase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HI87_KLENI) HSP 1 Score: 272 bits (695), Expect = 6.340e-78 Identity = 129/212 (60.85%), Postives = 158/212 (74.53%), Query Frame = 3 Query: 669 WFAFGHDT*MCVHINVCASNVD-------EL*DRVPYFSYLSMLHLYETLGWWTAGSEVRKVHFAEEWNELQHLKIMESLGGDERWSDRFMARHAAILYYWVLNLGYLISPFLAYNFSELLESHAVDTYSEFIEANKDLLKSLPPTKQALEYYTAGDMYLFDEFQTARPAYSRRPIIRSLYDVFRNIRDDEVEHVKTMFACERGERNIVSPN 1283 W+ G +C+ ++V + E R+PYFSY+SMLHLYETLGWW G+EVRKVHFAEEWNE+ HLKIMESLGGD +W DRF +HAA YYW+LN +L+SP +AYNFSEL+E HAVDTY EF EANK+LL SLPP+ A+EYY D+Y+FDEFQT+R +RRP + +LYDVF NIRDDE EHVKTM AC+ G + I+SPN Sbjct: 312 WYILGPYYFLCLILDVIFNGRPIQRFWFLETVARMPYFSYISMLHLYETLGWWRVGAEVRKVHFAEEWNEMHHLKIMESLGGDNQWVDRFFGQHAAFFYYWILNFLFLVSPKVAYNFSELIEFHAVDTYEEFAEANKELLMSLPPSPVAVEYYRGEDLYMFDEFQTSRRPATRRPKVDNLYDVFCNIRDDEFEHVKTMVACQDGGQPIISPN 523 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1157.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1157.1.1 >prot_C-tenellus_contig1157.1.1 ID=prot_C-tenellus_contig1157.1.1|Name=mRNA_C-tenellus_contig1157.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=259bp MLHLYETLGWWTAGSEVRKVHFAEEWNELQHLKIMESLGGDERWSDRFMAback to top mRNA from alignment at C-tenellus_contig1157:1608..8772- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig1157.1.1 ID=mRNA_C-tenellus_contig1157.1.1|Name=mRNA_C-tenellus_contig1157.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=7165bp|location=Sequence derived from alignment at C-tenellus_contig1157:1608..8772- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig1157:1608..8772- >mRNA_C-tenellus_contig1157.1.1 ID=mRNA_C-tenellus_contig1157.1.1|Name=mRNA_C-tenellus_contig1157.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=777bp|location=Sequence derived from alignment at C-tenellus_contig1157:1608..8772- (Choristocarpus tenellus KU2346)back to top |