mRNA_C-tenellus_contig11566.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig11566.1.1 vs. uniprot
Match: A0A6H5KNP4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNP4_9PHAE) HSP 1 Score: 361 bits (926), Expect = 6.510e-99 Identity = 194/429 (45.22%), Postives = 256/429 (59.67%), Query Frame = 1 Query: 412 KEATGVATNLLELCLTFGIPLSIRSDAGGEFT*DIMNRLCRWLKVPINYGPTDNSRGQGGVEKTGGLLLEALSELCVKWPDR*DEYVSPACWAQHTTPDPSDPLNPTPFRVFFGRDPRTQIDTAIPKVDGDVEVGRLDSFIEQRRQNFREVREVLERRTSTIQKYRERTNALIARSSPGLGSKPGDLVLVEEADSSIHGERLDETRLARKLVHERWTGPWTVKKISQQRISITVKLLGRQTRTRNVPASYVKPLHVRSIHLRRSFQEEYAQLVWGSDLGLSEQSVVATPIYTLTDRKAVLSP---SYVWHWEYRGKYQYGELPD*VTEKEAMDSFTLLQLDVFHALW-DLYNPDTSPR--STDTYRQEKPLSREDALCLFPKGATVKKSWEDEKGRDKWYIGTAFDFKSPYWRVPFNDGDWEELNKSEM 1680 KE GV+ LLEL L FG+PLSIR D G E T +IM LCRWLKV +++GP ++ RGQG VE+ G +L + LSELC WP R DEYV+ A WA PD S P N +P+++ FGR PRT +D P +D L+S +E+ R+ EV + L +R + ++R+ NA I+R+SPG S+ GD VLV E+ S++H + + KL H+ +TGPW V + + +S TV+L GRQ R R V AS +K + R + LR F++E++ VWG DLGL E SVVA P+YTL DR+ S W WEYRGKYQ G +TE DSF+ LQLDVFHALW D + D +PR T + + +RE AL FP V K D+ G DF PYWRV F+DGDWEE + E+ Sbjct: 1261 KETVGVSRKLLELILIFGLPLSIRCDPGRENTSEIMEHLCRWLKVSLDFGPANHPRGQGTVERMGAVLAQLLSELCQAWPQRWDEYVAIATWAHRMQPDESLPGNVSPYQMLFGRAPRTPLDQLSPSLDNSGSALGLESSVEETRRKHIEVTDALRKRQAEKNRHRDLQNARISRASPGAKSRVGDKVLVRESASTLHRDGVHP-----KLAHDHFTGPWVVVNVVRMGLSFTVRLHGRQVRQRTVVASDMKQFYSRPLDLRLPFEDEFSHFVWGPDLGLVEDSVVAAPLYTLVDRRTTQGAGGASTAWAWEYRGKYQDGTTSSWLTEDTVKDSFSPLQLDVFHALWEDYHGSDVAPRPPGAPTRGEREVATREAALQEFPLNTEVAKELRDKDDNIILSRGKVCDFYDPYWRVEFSDGDWEEFTRREL 1684
BLAST of mRNA_C-tenellus_contig11566.1.1 vs. uniprot
Match: A0A6H5KEH2_9PHAE (RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEH2_9PHAE) HSP 1 Score: 340 bits (873), Expect = 5.100e-92 Identity = 189/431 (43.85%), Postives = 254/431 (58.93%), Query Frame = 1 Query: 406 RQKEATGVATNLLELCLTFGIPLSIRSDAGGEFT*DIMNRLCRWLKVPINYGPTDNSRGQGGVEKTGGLLLEALSELCVKWPDR*DEYVSPACWAQHTTPDPSDPLNPTPFRVFFGRDPRTQIDTAIPKVDGDVEVGRLDSFIEQRRQNFREVREVLERRTSTIQKYRERTNALIARSSPGLGSKPGDLVLVEEADSSIHGERLDETRLARKLVHERWTGPWTVKKISQQRISITVKLLGRQTRTRNVPASYVKPLHVRSIHLRRSFQEEYAQLVWGSDLGLSEQSVVATPIYTLTDRKAVLSPSYVWH-WEYRGKYQYGELPD*VTEKEAMDSFTLLQLDVFHALWDLYNPDTSPRST-DTYRQEKPLSREDALCLFPKGATVKKSWEDEKGRDKWYIGTAFDFKSPYWRVPFNDGDWEELNKSEMSRFS 1692 + K+A GVA ++ELCLT+G+P ++R D G EF +++ LCRWL+ I +G D+ RGQG VE+ GG L E L+ELC WPDR DEYVSPA W + T PD S P N TPF + FGR PRT +D+ +P D + LD+F+E+R+QN REVR LE+R R + NA I RSS G+G LVLV E +S H + RKL H+ +TGPW V I Q +S+ V + GR+ R+R V + VKP H+R + LR S EE+AQ WG D L + + + T+ D + V S + WEY+GK G + D + E+ SFT LQLD F ALW LY P + S D+ + PLSR AL +FP G T +K E G +D+ SPYWRV + DG+WEEL++ E+ R + Sbjct: 1459 KTKQAVGVARVVVELCLTYGVPKTVRCDGGPEFGAEVVKHLCRWLRASIVFGAADHPRGQGAVERLGGWLQELLAELCRFWPDRWDEYVSPAMWIKRTLPDTSLPSNMTPFELLFGRKPRTSLDSLVPLTDEMDQERGLDNFVERRKQNLREVRLALEKRQELRVAARAKANASIDRSSAGVGVMKESLVLVREFESCRHRDHR-----GRKLQHDLYTGPWKVTGIIQPGLSVEVMMHGRKKRSRRVSTADVKPFHLRELPLRHSLAEEFAQHAWGPDFKLPPGAKESLGLVTIADCRRVQPASGMRTVWEYKGKSGNGVVSDWLPEETMRRSFTPLQLDCFVALWHLYFPQLANASAPDSVKPRTPLSRAQALHVFPIGFTFQK----ELAGGILLQGQVYDYVSPYWRVRYTDGNWEELSRRELERLA 1880
BLAST of mRNA_C-tenellus_contig11566.1.1 vs. uniprot
Match: A0A6H5JMP6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP6_9PHAE) HSP 1 Score: 308 bits (790), Expect = 4.090e-85 Identity = 178/431 (41.30%), Postives = 243/431 (56.38%), Query Frame = 1 Query: 412 KEATGVATNLLELCLTFGIPLSIRSDAGGEFT*DIMNRLCRWLKVPINYGPTDNSRGQGGVEKTGGLLLEALSELCVKWPDR*DEYVSPACWAQHTTPDPSDPLNPTPFRVFFGRDPRTQIDTAIPKVDGDVEVGRLDSFIEQRRQNFREVREVLERRTSTIQKYRERTNALIARSSPGLGSKPGDLVLVEEADSSIHGERLDETRLARKLVHERWTGPWTVKKISQQRISITVKLLGRQTRTRNVPASYVKPLHVRSIHLRRSFQEEYAQLVWGSDLGLSEQSVVATPIYTLTDRKAVLSPSYVWHWEYRGKYQYGELPD*VTEKEAMDSFTLLQLDVFHALWDLYNP----DTSPRSTDTYRQEKPLSREDALCLFPKGATVKKSWEDEKGRDKWYIGTAFDFKSPYWRVPFNDGDWEELNKSEMSRFS 1692 K+A GVA L+E CLTFG+P +IR D G EF +++ LCRWL+ I +G D+ RGQG VE+ GG L E ++LC WPDR D YVSP+ W + T PD + P + PF+ F R PRT +D+ +P D G LD+F+++R+QN REVR LERR R + NA I RSS G+ LVLV E +S + +R R+L H+ +TGP V + + + + V L GR+ RTR V + VKP H+ LR S +E+A WG+D+ L + ++ D + S + V WEYRGK G + D ++E + SFT LQLD F ALW LY+P D P S + PLSR +AL LFP T++K + G FDF PYWRV ++D +WEEL + E+ R S Sbjct: 457 KQAVGVARVLVEQCLTFGVPNTIRCDGGSEFGAEVVTHLCRWLRTDIVFGAADHPRGQGSVERLGGWLQELPAKLCRSWPDRWDGYVSPSIWIKRTLPDTALPSHMIPFKRLFDRKPRTTLDSLVPLTDETGTEGGLDNFVKRRKQNLREVRIALERRHELRVAARAKANATIERSSAGVAVGRNSLVLVRETESRRYRDRR-----GRELQHDLYTGPSKVTDVIRPGLIVEVSLHGRRKRTRRVSTADVKPFHLSPPSLRLSISDEFAAYAWGADVKLPSGAAELLEFVSIADCRRSRSRTQVV-WEYRGKLGSGAVSDWLSEDVMLRSFTPLQLDGFVALWHLYHPQQANDLPPVSV---KPRAPLSRAEALKLFPIDFTLRKELDGGVNLQ----GQVFDFLQPYWRVGYSDQNWEELARRELERLS 874
BLAST of mRNA_C-tenellus_contig11566.1.1 vs. uniprot
Match: A0A6H5K3V4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3V4_9PHAE) HSP 1 Score: 319 bits (818), Expect = 4.290e-85 Identity = 178/430 (41.40%), Postives = 241/430 (56.05%), Query Frame = 1 Query: 406 RQKEATGVATNLLELCLTFGIPLSIRSDAGGEFT*DIMNRLCRWLKVPINYGPTDNSRGQGGVEKTGGLLLEALSELCVKWPDR*DEYVSPACWAQHTTPDPSDPLNPTPFRVFFGRDPRTQIDTAIPKVDGDVEVGRLDSFIEQRRQNFREVREVLERRTSTIQKYRERTNALIARSSPGLGSKPGDLVLVEEADSSIHGERLDETRLARKLVHERWTGPWTVKKISQQRISITVKLLGRQTRTRNVPASYVKPLHVRSIHLRRSFQEEYAQLVWGSDLGLSEQSVVATPIYTLTDRKAVLSPSY--VWHWEYRGKYQYGELPD*VTEKEAMDSFTLLQLDVFHALW-DLYNPDTSPRSTDTYR--QEKPLSREDALCLFPKGATVKKSWEDEKGRDKWYIGTAFDFKSPYWRVPFNDGDWEELNKSEM 1680 + KE GV+ LL L L FG+P SIR D G + T +IM CRWLKV +++GP ++ RGQG VE+ G +L + LSELC WP R +EYV+ A W D S P N +P ++ FGR PRT +D P +D L+ +E+ R +V E L +R + + R NA +R+SPG +K GD VLV E+ S++H + KL H+ +TGPW V + +S TV+L R R R V AS +KP + R + +R +F++E+A VW DLGL E SVVA P+YTL DR+ + W WEY+GKYQ G D +TE DSF+ LQL +FHAL D + D +PR + + +RE AL FP V + D G G DF PYWRV F+D DWEEL + E+ Sbjct: 1805 KTKERVGVSRKLLGLLLIFGLPTSIRCDPGRDNTSEIMEHPCRWLKVSLDFGPANHPRGQGTVERMGAVLAQLLSELCQAWPRRWEEYVTVATWTHRMQQDESLPGNASPCQMLFGRSPRTPLDQLAPSLDNSGAALGLEPSVEETRHKHIQVTEALRKRQAEKNRQRNLQNARFSRTSPGAKAKEGDKVLVRESASTLHRDGTHP-----KLAHDHFTGPWVVITVVCAGLSFTVRLNERHVRQRTVAASDMKPFYSRPLDVRLAFEDEFAHYVWEPDLGLVEDSVVAAPLYTLFDRRTTQAGGAPTAWAWEYKGKYQEGTPSDWLTEDTVKDSFSPLQLGIFHALCEDYHGTDVAPRPPGALSRGEHEVATREAALKEFPLDTEVARELLDSDGNVVVSRGKVCDFYDPYWRVKFSDDDWEELTRREL 2229
BLAST of mRNA_C-tenellus_contig11566.1.1 vs. uniprot
Match: A0A6H5KNQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ8_9PHAE) HSP 1 Score: 306 bits (784), Expect = 3.950e-81 Identity = 173/427 (40.52%), Postives = 237/427 (55.50%), Query Frame = 1 Query: 412 KEATGVATNLLELCLTFGIPLSIRSDAGGEFT*DIMNRLCRWLKVPINYGPTDNSRGQGGVEKTGGLLLEALSELCVKWPDR*DEYVSPACWAQHTTPDPSDPLNPTPFRVFFGRDPRTQIDTAIPKVDGDVEVGRLDSFIEQRRQNFREVREVLERRTSTIQKYRERTNALIARSSPGLGSKPGDLVLVEEADSSIHGERLDETRLARKLVHERWTGPWTVKKISQQRISITVKLLGRQTRTRNVPASYVKPLHVRSIHLRRSFQEEYAQLVWGSDLGLSEQSVVATPIYTLTDRKAVLSPSY----VWHWEYRGKYQYGELPD*VTEKEAMDSFTLLQLDVFHALWDLYNPD--TSPRSTDTYRQEKPLSREDALCLFPKGATVKKSWEDEKGRDKWYIGTAFDFKSPYWRVPFNDGDWEELNKS 1674 K+A GV++ LLEL L FG+P S+R+D G E +M LC WLK EALS LC WP R D+YV A W TPD S P +P+++ FG PR+ ID +DG L+ +E++ +E+L +R + K ER NA I R SPG ++ GD VLV E S++ + L KL HE +TGPW V + +R+ TV++ GR+ R R V A+ VKP H R HL+ +++E++ L+W +DLGL+ SV A P YTL R+ + P W WEYRG+YQ G D +TE EA DSF+ LQLDVFHALW+L++P T P T + + SR+ AL +FP+G V + + D +GR K + +D+ PYWRV + DGDWE L KS Sbjct: 1262 KDALGVSSKLLELLLIFGMPFSVRADMGSENIARVMKHLCNWLK-------------------------EALSLLCKAWPQRWDDYVPVATWIHWVTPDLSLPGGASPYQILFGLPPRSHIDLLAQPLDGASFGQGLEITVEEQHHM---TQEILAKRQEALTKQSERHNAKIGRESPGAKAQVGDFVLVRETPVSLYRDSLHP-----KLAHEHFTGPWKVVNVLPERLCFTVQMNGRRVRQRRVVAADVKPFHQRPAHLQLEYEDEFSHLIWSADLGLAGTSVAAVPPYTLMARR--VGPGKGGADAWAWEYRGRYQDGAQSDWITEDEARDSFSPLQLDVFHALWELHHPSDATRPTGEPTRGEREVESRDRALEMFPRGTEVGRVFMDAEGRSKTFKAKVYDYCDPYWRVEYPDGDWEALTKS 1653
BLAST of mRNA_C-tenellus_contig11566.1.1 vs. uniprot
Match: A0A6H5JV25_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV25_9PHAE) HSP 1 Score: 227 bits (579), Expect = 8.080e-63 Identity = 119/256 (46.48%), Postives = 159/256 (62.11%), Query Frame = 1 Query: 406 RQKEATGVATNLLELCLTFGIPLSIRSDAGGEFT*DIMNRLCRWLKVPINYGPTDNSRGQGGVEKTGGLLLEALSELCVKWPDR*DEYVSPACWAQHTTPDPSDPLNPTPFRVFFGRDPRTQIDTAIPKVDGDVEVGRLDSFIEQRRQNFREVREVLERRTSTIQKYRERTNALIARSSPGLGSKPGDLVLVEEADSSIHGERLDETRLARKLVHERWTGPWTVKKISQQRISITVKLLGRQTRTRNVPASYVKPL 1173 + K+A GVA +ELCLT+G+P ++R D G EF +++ LCRWL+ I +G TD+ RGQG VE+ GG L E L+ELC WPDR DEYVSPA W + T PD S P N TPF + FGR PRT +D+ +P D + LD+F+E+R+QN REVR LE+R R + NA I RSS G+G LVLV E++SS H + RKL H+ +TGPW V I Q +S+ V + GR +V Y++P+ Sbjct: 74 KTKQAVGVARVAVELCLTYGVPKTVRCDGGPEFGAEVVKHLCRWLRANIVFGATDHPRGQGAVERLGGWLQELLAELCRSWPDRWDEYVSPAMWIKRTLPDTSLPSNMTPFELLFGRKPRTSLDSLVPLTDEMDQERGLDNFVERRKQNLREVRLALEKRQELRVAARAKANASIERSSAGVGVMKDSLVLVRESESSRHRDHR-----GRKLQHDLYTGPWKVTGIIQPGLSVEVMMHGR-----SVAEGYLRPM 319
BLAST of mRNA_C-tenellus_contig11566.1.1 vs. uniprot
Match: A0A6H5JAJ3_9PHAE (RT_RNaseH_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAJ3_9PHAE) HSP 1 Score: 215 bits (547), Expect = 1.630e-52 Identity = 121/278 (43.53%), Postives = 164/278 (58.99%), Query Frame = 1 Query: 868 EVLERRTSTIQKYRERTNALIARSSPGLGSKPGDLVLVEEADSSIHGERLDETRLARKLVHERWTGPWTVKKISQQRISITVKLLGRQTRTRNVPASYVKPLHVRSIHLRRSFQEEYAQLVWGSDLGLSEQSVVATPIYTLTDRKAVLSPSYV--WHWEYRGKYQYGELPD*VTEKEAMDSFTLLQLDVFHALWDLY---NPDTSPRSTDTYRQEKPLSREDALCLFPKGATVKKSWEDEKGRDKWYIGTAFDFKSPYWRVPFNDGDWEELNKSEMSR 1686 E+L + ++RER NA +AR SPG + G+ VLV+E +++H + +L H+ + GPW V ++ R+S V+L GR+ R R V A KP H R LR SF++E+A ++W +DLGL++ SVVA P+YTL DR+AV W WEY+ YQ G L TE+E DSF+ LQLDVFHAL++L+ N P T + + SRE AL LFP G V + + D G K + TAFD PYWRV + DGDWEEL KSEM + Sbjct: 1662 EILTYQHEAQNRHRERHNARVARESPGAKTAVGNYVLVKEPAATLHRDGHHP-----ELTHDHYIGPWKVTEVIHDRLSFAVQLKGRRIRRRKVAAPDFKPYHGRPQDLRLSFEDEFAYVMWSADLGLADISVVAVPLYTLVDRRAVRGADNAPTWTWEYQDHYQDGALSPWPTEEEVGDSFSPLQLDVFHALYELFYGENGAPRPAGPPTRGEREVASREQALQLFPVGTQVGREFADSDGHLKVFKATAFDCCDPYWRVEYPDGDWEELTKSEMDK 1934
BLAST of mRNA_C-tenellus_contig11566.1.1 vs. uniprot
Match: A0A6H5K948_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K948_9PHAE) HSP 1 Score: 213 bits (542), Expect = 2.190e-52 Identity = 133/379 (35.09%), Postives = 194/379 (51.19%), Query Frame = 1 Query: 604 GGLLLEALSELCVKWPDR*DEYVSPACWAQHTTPDPSDPLNPTPFRVFFGRDPRTQIDTAIPKVDGDVEVGRLDSFIEQRRQNFREVREVLERRTSTIQKYRERTNALIARSSPGLGSKPGDLVLVEEADSSIHGERLDETRLA-RKLVHERWTGPWTVKKISQ----------------------------------QRISITVKLLGRQTRTRNVPASYVKPLHVRSIHLRRSFQEEYAQLVWGSDLGLSEQSVVATPIYTLTDRKAVLSPSY-VWHWEYRGKYQYGELPD*VTEKEAMDSFTLLQLDVFHALWDLYNPDTSPR--STDTYRQEKPLSREDALCLFPKGATVKKSWEDEKGRDKWYIGTAFDFKSPY 1626 GG L +ALS LC WP R D+YV A W TPDP+ P +P+++ FGR PR+ +D +D ++ +E + +E+ +R+ + K RER NA IA SPG ++ GD S T +A +L HE +TGPWTV + R+ TV+L GR+ R R V A+ +KP H R HL+ F++E++ ++W + LGL++ SV+A P+YTLT R+ S W WEYRG+YQ G + E EA DSF+ LQLDVFHALW+L++PD+ P+ Q K SRE AL +FP G V + + + +G+ + + +D+ PY Sbjct: 777 GGWLQKALSLLCKAWPQRWDDYVPVATWIHRVTPDPALPGGASPYQILFGRPPRSHVDFFAQPLDSTSFGQGVERTVEDQYHLTQEI--PAKRQEEVLTKRRERHNARIAPESPGAKTQIGDWCWSTRPPSP-------STEMACTRLAHEHFTGPWTVVNVLXLVHETPVSLYRDGLHPKXXXXXXXXXXXXXXXLLARLCFTVQLNGRRIRQRRVVAADIKPFHRRPTHLQLPFEDEFSHVIWSASLGLTDTSVLAVPLYTLTARRVGQGKSAGSWAWEYRGRYQDGIQSSWIPEAEARDSFSPLQLDVFHALWELHHPDSEPQPPGEPARGQRKVESRERALEMFPCGTVVGRIFTNAEGQSEVFKSKVYDYCDPY 1146
BLAST of mRNA_C-tenellus_contig11566.1.1 vs. uniprot
Match: A0A6H5KZY5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZY5_9PHAE) HSP 1 Score: 171 bits (433), Expect = 4.440e-39 Identity = 102/257 (39.69%), Postives = 140/257 (54.47%), Query Frame = 1 Query: 412 KEATGVATNLLELCLTFGIPLSIRSDAGGEFT*DIMNRLCRWLKVPINYGPTDNSRGQGGVEKTGGLLLEALSELCVKWPDR*DEYVSPACWAQHTTPDPSDPLNPTPFRVFFGRDPRTQIDTAIPKVDGDVEVGRLDSFIEQRRQNFREVREVLERRTSTIQKYRERTNALIARSSPGLGSKPGDLVLVEEADSSIHGERLDETRLARKLVHERWTGPWTVKKISQQRISITVKLLGRQTRTRNVPASYVKPLHVR 1182 K+A GVA ++ELCLT+G+P ++R D G EF +++ LCRWL+ I +G D+ RGQG VE+ GG L E L++LC W DR D +VSPA W + T PD S P N TPF G TA + + V + DS R E+R R + NA I RSS G+G LVLV E++SS H + R+L H+ +TGPW V + Q +S+ V + GR+ R+R V + V P H+R Sbjct: 1464 KQAVGVARVVVELCLTYGVPKTVRCDGGPEFGAEVVKHLCRWLRANIVFGAADHPRGQGSVERLGGWLQEMLAKLCRSWSDRWDVFVSPAMWIKRTLPDTSLPSNMTPFEFLNGDS------TASWRGASKISV-KYDS---PSRNGMNELRVAA----------RAKANASIERSSAGVGDVKDSLVLVGESESSRHRDHR-----GRELQHDLYTGPWKVTGVVQPGLSVEVMMHGRKKRSRRVSTADVNPFHLR 1695
BLAST of mRNA_C-tenellus_contig11566.1.1 vs. uniprot
Match: A0A6H5K9B2_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9B2_9PHAE) HSP 1 Score: 162 bits (410), Expect = 6.380e-37 Identity = 75/151 (49.67%), Postives = 99/151 (65.56%), Query Frame = 1 Query: 412 KEATGVATNLLELCLTFGIPLSIRSDAGGEFT*DIMNRLCRWLKVPINYGPTDNSRGQGGVEKTGGLLLEALSELCVKWPDR*DEYVSPACWAQHTTPDPSDPLNPTPFRVFFGRDPRTQIDTAIPKVDGDVEVGRLDSFIEQRRQNFREV 864 +A GVA ++ELCLT+G+P ++R D G EF ++ LCRWL+ I +G D+ RGQG VE+ GG L E L+ELC WPDR DEYVSPA W + T PD S P TPF FGR PRT +D+ +P D + +D+F+E+R+ N REV Sbjct: 678 NQAVGVARVVVELCLTYGVPKTVRCDEGPEFGARLVKHLCRWLRANIVFGAADHPRGQGSVERLGGWLQELLAELCRPWPDRWDEYVSPAMWIKRTLPDTSLPTYMTPFEFLFGRKPRTSLDSLVPLTDEMDQERGVDNFVERRKHNLREV 828 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11566.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig11566.1.1 >prot_C-tenellus_contig11566.1.1 ID=prot_C-tenellus_contig11566.1.1|Name=mRNA_C-tenellus_contig11566.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=132bp MGLKGDQGRNGVVLTRFGVEKKRGEDSMGGFEVGGLEVVLAIMECFPELLback to top mRNA from alignment at C-tenellus_contig11566:947..5207- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig11566.1.1 ID=mRNA_C-tenellus_contig11566.1.1|Name=mRNA_C-tenellus_contig11566.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4261bp|location=Sequence derived from alignment at C-tenellus_contig11566:947..5207- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig11566:947..5207- >mRNA_C-tenellus_contig11566.1.1 ID=mRNA_C-tenellus_contig11566.1.1|Name=mRNA_C-tenellus_contig11566.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=396bp|location=Sequence derived from alignment at C-tenellus_contig11566:947..5207- (Choristocarpus tenellus KU2346)back to top |