mRNA_C-tenellus_contig11565.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig11565.1.1 vs. uniprot
Match: D7FMG2_ECTSI (Cycloeucalenol cycloisomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMG2_ECTSI) HSP 1 Score: 159 bits (401), Expect = 6.530e-39 Identity = 86/133 (64.66%), Postives = 101/133 (75.94%), Query Frame = 1 Query: 1 VSQVVTSFNAGIARTVTLVVLVGAMAYTTAFMETLTISSFPYYTFEDRDMAYVLGSAFYGIYFIVSFPMFYAFDEWPKQENQEVTGNGAGLHGSVGEDRTLWGTAVNSMGASMLILTLLDLVRLVLGIEFVIK 399 + +VVTSF A +R VTLVVLVG M+Y AF ETLTIS FPYY FEDRDMAYV+GSAFYGIYF+VSFPMFYAFDEWP+++ ++ AG R LWG AV+S+GASMLIL LLD VRL +G EF +K Sbjct: 235 IRKVVTSFEATTSRAVTLVVLVGVMSYAVAFTETLTISGFPYYEFEDRDMAYVVGSAFYGIYFVVSFPMFYAFDEWPQEDENKLADRKAG-----NSARGLWGAAVDSLGASMLILCLLDFVRLAVGSEFFMK 362
BLAST of mRNA_C-tenellus_contig11565.1.1 vs. uniprot
Match: A0A836CJT1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJT1_9STRA) HSP 1 Score: 126 bits (317), Expect = 3.130e-28 Identity = 74/126 (58.73%), Postives = 87/126 (69.05%), Query Frame = 1 Query: 7 QVVTSFNAGIARTVTLVVLVGAMAYTTAFMETLTISSFPYYTFEDRDMAYVLGSAFYGIYFIVSFPMFYAFDEWPKQENQEVTGNGAGLHGSVGEDRTLWGTAVNSMGASMLILTLLDLVRLVLGI 384 +VVT++ AR+V LV LV AM+Y AFMETLTIS++P Y+FEDR+MAY LGSAFYGIYFIVSFPMFY FDEWP+Q Q +LW T V+SMG M ILTLLD VRL G+ Sbjct: 196 KVVTTYVHNAARSVFLVALVLAMSYFVAFMETLTISAYPDYSFEDREMAYKLGSAFYGIYFIVSFPMFYRFDEWPQQLKQP----------------SLWQTCVDSMGTGMAILTLLDAVRLATGV 305
BLAST of mRNA_C-tenellus_contig11565.1.1 vs. uniprot
Match: A0A7R9WGB3_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WGB3_9STRA) HSP 1 Score: 117 bits (294), Expect = 2.420e-26 Identity = 70/130 (53.85%), Postives = 89/130 (68.46%), Query Frame = 1 Query: 7 QVVTSFNAGIARTVTLVVLVGAMAYTTAFMETLTISSFPYYTFEDRDMAYVLGSAFYGIYFIVSFPMFYAFDEWPKQENQEVTGNGAGLHGSVGEDRTLWGTAVNSMGASMLILTLLDLVRLVLGIEFVI 396 +VVT++ AG+ RT+ + +V ++Y TAFMETLTISSFPYY+FEDR+MAY +GSAFYGIYF+VSFP FYAFDE Q G+ + TLW V+S G M+IL LLD VRL LGI ++ Sbjct: 86 KVVTTYEAGMKRTILYIGVVIVLSYFTAFMETLTISSFPYYSFEDRNMAYTVGSAFYGIYFLVSFPAFYAFDEEIDSSEQ-----GSRIV-------TLWDAFVSSCGYGMMILCLLDFVRLYLGIPLLV 203
BLAST of mRNA_C-tenellus_contig11565.1.1 vs. uniprot
Match: A0A7S2V4D0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4D0_9STRA) HSP 1 Score: 115 bits (288), Expect = 1.070e-24 Identity = 74/132 (56.06%), Postives = 86/132 (65.15%), Query Frame = 1 Query: 1 VSQVVTSFNAGIARTVTLVVLVGAMAYTTAFMETLTISSFPYYTFEDRDMAYVLGSAFYGIYFIVSFPMFYAFDEWPKQENQEVTGNGAGLHGSVGEDRTLWGTAVNSMGASMLILTLLDLVRLVLGIEFVI 396 + +VVTSF G AR L L+ AM+Y TAF ETLTISSFPYY FEDR+MAY +GSAFYGIYFIVSFPMFY E K+E G+ TL ++S+GA MLIL LLD+VRL LGI I Sbjct: 167 IRKVVTSFQEGWARWFFLAALILAMSYFTAFAETLTISSFPYYDFEDRNMAYTVGSAFYGIYFIVSFPMFYRIYE--KKE--------------AGQGFTLGQVIIDSLGAGMLILILLDIVRLYLGIPLTI 282
BLAST of mRNA_C-tenellus_contig11565.1.1 vs. uniprot
Match: A0A7S1GNB7_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GNB7_CYCTE) HSP 1 Score: 108 bits (271), Expect = 3.560e-24 Identity = 69/131 (52.67%), Postives = 85/131 (64.89%), Query Frame = 1 Query: 7 QVVTSFNAGIARTVTLVVLVGAMAYTTAFMETLTISSFPYYTFEDRDMAYVLGSAFYGIYFIVSFPMFYAFDEW-PKQENQEVTGNGAGLHGSVGEDRTLWGTAVNSMGASMLILTLLDLVRLVLGIEFVI 396 +V T+F G+ RT+ V +V +Y TAFMETLTISSFPYY+FEDR MAY +GSAFYGIYFIVSFP F FDE +++ EV+ LW T V+S G SM+IL +LD VRL L I V+ Sbjct: 12 KVRTTFELGLMRTILYVSVVLVFSYFTAFMETLTISSFPYYSFEDRVMAYTVGSAFYGIYFIVSFPAFDHFDEEVDSKDSPEVS---------------LWYTIVSSAGYSMMILCMLDFVRLYLNIPLVV 127
BLAST of mRNA_C-tenellus_contig11565.1.1 vs. uniprot
Match: A0A7S2UFV3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UFV3_9STRA) HSP 1 Score: 111 bits (277), Expect = 6.150e-23 Identity = 69/130 (53.08%), Postives = 82/130 (63.08%), Query Frame = 1 Query: 7 QVVTSFNAGIARTVTLVVLVGAMAYTTAFMETLTISSFPYYTFEDRDMAYVLGSAFYGIYFIVSFPMFYAFDEWPKQENQEVTGNGAGLHGSVGEDRTLWGTAVNSMGASMLILTLLDLVRLVLGIEFVI 396 ++VTS+ G R V V + +Y TAFMETLTISSFPYY+F DRDMAY +GSAFYGIYF+VSFP F+AFD E+ N G S T W T V S G M+ILTLLD VRL L + V+ Sbjct: 197 RIVTSYAPGPKRHVLYVTFIFVFSYFTAFMETLTISSFPYYSFADRDMAYTVGSAFYGIYFLVSFPAFFAFDN-------EIDANNKGKDKSS-LPVTAWDTFVASCGYGMMILTLLDFVRLYLDVPLVV 318
BLAST of mRNA_C-tenellus_contig11565.1.1 vs. uniprot
Match: F0Y312_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y312_AURAN) HSP 1 Score: 110 bits (275), Expect = 6.190e-23 Identity = 64/110 (58.18%), Postives = 74/110 (67.27%), Query Frame = 1 Query: 70 AMAYTTAFMETLTISSFPYYTFEDRDMAYVLGSAFYGIYFIVSFPMFYAFDEWPKQENQEVTGNGAGLHGSVGEDRTLWGTAVNSMGASMLILTLLDLVRLVLGIEFVIK 399 AM+Y TAFMETLTIS FPYY+FEDRDMAY +GSAFYGIYF+VSFPMF DE P NGA L+ TAV ++ +SM +L LLD VRL LGI F +K Sbjct: 192 AMSYLTAFMETLTISGFPYYSFEDRDMAYTVGSAFYGIYFLVSFPMFLRLDETPP-----TVVNGA--------THDLFATAVEALASSMAVLCLLDFVRLALGIPFAMK 288
BLAST of mRNA_C-tenellus_contig11565.1.1 vs. uniprot
Match: A0A7S2YCQ2_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YCQ2_9STRA) HSP 1 Score: 109 bits (272), Expect = 7.020e-23 Identity = 65/130 (50.00%), Postives = 85/130 (65.38%), Query Frame = 1 Query: 7 QVVTSFNAGIARTVTLVVLVGAMAYTTAFMETLTISSFPYYTFEDRDMAYVLGSAFYGIYFIVSFPMFYAFDEWPKQENQEVTGNGAGLHGSVGEDRTLWGTAVNSMGASMLILTLLDLVRLVLGIEFVI 396 +VVT++ AG R++ V +V +Y TAFMETLTISS+PYY FEDR MAY +GSAFYGIYF+VSFP F+ FD+ ++++ TLW T V+S G M+I+TLLD VRL L I V+ Sbjct: 134 KVVTTYQAGPMRSLLFVSVVVVFSYFTAFMETLTISSYPYYDFEDRHMAYTVGSAFYGIYFLVSFPGFFVFDQDIDSDDEKKK-----------RVVTLWDTFVSSCGHGMMIMTLLDFVRLYLDIPLVV 252
BLAST of mRNA_C-tenellus_contig11565.1.1 vs. uniprot
Match: A0A7S1FLY4_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FLY4_9STRA) HSP 1 Score: 110 bits (275), Expect = 8.740e-23 Identity = 66/132 (50.00%), Postives = 83/132 (62.88%), Query Frame = 1 Query: 7 QVVTSFNAGIARTVTLVVLVGAMAYTTAFMETLTISSFPYYTFEDRDMAYVLGSAFYGIYFIVSFPMFYAFDEW--PKQENQEVTGNGAGLHGSVGEDRTLWGTAVNSMGASMLILTLLDLVRLVLGIEFVI 396 +V T+F G R + L+ A++Y TAFMETLTISSFPYY+FEDR+MAY GSAFYGIYFIVSFP FY FD K+ ++ G LW T +S G M+I+ LLD+VRL LGI ++ Sbjct: 186 KVQTAFIPGFRRNLLFCFLIFALSYFTAFMETLTISSFPYYSFEDRNMAYTFGSAFYGIYFIVSFPTFYFFDSSIDSKESESKIPG--------------LWETFSSSCGTGMMIMCLLDIVRLYLGIPLIV 303
BLAST of mRNA_C-tenellus_contig11565.1.1 vs. uniprot
Match: R1EB37_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EB37_EMIHU) HSP 1 Score: 108 bits (270), Expect = 1.080e-22 Identity = 67/122 (54.92%), Postives = 78/122 (63.93%), Query Frame = 1 Query: 7 QVVTSFNAGIARTVTLVVLVGAMAYTTAFMETLTISSFPYYTFEDRDMAYVLGSAFYGIYFIVSFPMFYAFDEWPKQENQEVTGNGAGLHGSVGEDRTLWGTAVNSMGASMLILTLLDLVRL 372 +V T F G RT +V A++Y TAFMETLTIS FPYY FEDR MAY LGSAFYGIYF+VSFP++YA DE P E TG L G A++S+GA ML+L LLDL RL Sbjct: 117 RVATGFAPGNLRTALFAYVVCALSYATAFMETLTISHFPYYDFEDRHMAYTLGSAFYGIYFLVSFPVYYALDE-PGNTPLEGTG--------------LRGVALSSLGAGMLVLLLLDLTRL 223 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11565.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig11565.1.1 >prot_C-tenellus_contig11565.1.1 ID=prot_C-tenellus_contig11565.1.1|Name=mRNA_C-tenellus_contig11565.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=112bp MAYTTAFMETLTISSFPYYTFEDRDMAYVLGSAFYGIYFIVSFPMFYAFDback to top mRNA from alignment at C-tenellus_contig11565:63..3867+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig11565.1.1 ID=mRNA_C-tenellus_contig11565.1.1|Name=mRNA_C-tenellus_contig11565.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3805bp|location=Sequence derived from alignment at C-tenellus_contig11565:63..3867+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig11565:63..3867+ >mRNA_C-tenellus_contig11565.1.1 ID=mRNA_C-tenellus_contig11565.1.1|Name=mRNA_C-tenellus_contig11565.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=336bp|location=Sequence derived from alignment at C-tenellus_contig11565:63..3867+ (Choristocarpus tenellus KU2346)back to top |