mRNA_C-tenellus_contig11545.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig11545.1.1 vs. uniprot
Match: A0A6H5L024_9PHAE (FHA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L024_9PHAE) HSP 1 Score: 192 bits (488), Expect = 1.280e-56 Identity = 88/107 (82.24%), Postives = 101/107 (94.39%), Query Frame = 1 Query: 1 ATLHIHRQSAYLVGRERRVADIVVDHPSCSKQHAVIQYRLFERVDEKEGVTRRSVRPYIMDLESTNGTFINSQPVDPARYVELKEKDVVKFGTSTREYVLLHDQSKG 321 ATLHIHRQSAYL+GRE+RVADIVVDHPSCSKQHAV+Q+R+FERVDEKEG TRRSVRPYIMDL+STNGT +N + ++ ARY+E+KEKDVVKFGTSTREYVLLHD+S G Sbjct: 443 ATLHIHRQSAYLIGREKRVADIVVDHPSCSKQHAVVQFRMFERVDEKEGTTRRSVRPYIMDLDSTNGTLLNGEQIESARYIEMKEKDVVKFGTSTREYVLLHDKSNG 549
BLAST of mRNA_C-tenellus_contig11545.1.1 vs. uniprot
Match: D8LEL7_ECTSI (FHA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEL7_ECTSI) HSP 1 Score: 192 bits (489), Expect = 3.160e-56 Identity = 89/107 (83.18%), Postives = 101/107 (94.39%), Query Frame = 1 Query: 1 ATLHIHRQSAYLVGRERRVADIVVDHPSCSKQHAVIQYRLFERVDEKEGVTRRSVRPYIMDLESTNGTFINSQPVDPARYVELKEKDVVKFGTSTREYVLLHDQSKG 321 ATLHIHRQSAYLVGRE+RVADIVVDHPSCSKQHAV+Q+R+FERVDEKEG TRRSVRPYIMDL+STNGT +N + ++ ARY+E+KEKDVVKFGTSTREYVLLHD+S G Sbjct: 517 ATLHIHRQSAYLVGREKRVADIVVDHPSCSKQHAVVQFRMFERVDEKEGTTRRSVRPYIMDLDSTNGTLLNGEQIESARYIEMKEKDVVKFGTSTREYVLLHDKSNG 623
BLAST of mRNA_C-tenellus_contig11545.1.1 vs. uniprot
Match: UPI00096B3FB5 (smad nuclear-interacting protein 1-like n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=UPI00096B3FB5) HSP 1 Score: 154 bits (388), Expect = 2.590e-45 Identity = 71/106 (66.98%), Postives = 89/106 (83.96%), Query Frame = 1 Query: 1 ATLHIHRQSAYLVGRERRVADIVVDHPSCSKQHAVIQYRLFERVDEKEGVTRRSVRPYIMDLESTNGTFINSQPVDPARYVELKEKDVVKFGTSTREYVLLHDQSK 318 +TL+IHRQSAYL+GR+R+V D DHPSCSKQHAVIQYRL + E +G + V+PYI+DL+STNGTF+N+ +DP+RYVE+KEKDV+KFG STREYVLLH+ SK Sbjct: 80 STLYIHRQSAYLIGRDRKVVDFPADHPSCSKQHAVIQYRLVDYTKE-DGRKGKKVKPYIIDLDSTNGTFVNNHKIDPSRYVEVKEKDVIKFGFSTREYVLLHESSK 184
BLAST of mRNA_C-tenellus_contig11545.1.1 vs. uniprot
Match: E9I2J5_DAPPU (FHA domain-containing protein (Fragment) n=1 Tax=Daphnia pulex TaxID=6669 RepID=E9I2J5_DAPPU) HSP 1 Score: 150 bits (379), Expect = 1.370e-44 Identity = 70/105 (66.67%), Postives = 88/105 (83.81%), Query Frame = 1 Query: 4 TLHIHRQSAYLVGRERRVADIVVDHPSCSKQHAVIQYRLFERVDEKEGVTRRSVRPYIMDLESTNGTFINSQPVDPARYVELKEKDVVKFGTSTREYVLLHDQSK 318 TL++HRQSAYL+GR+R+VADI +DHPSCSKQHA IQ+RL D +G R+VRPYI+DLE+ NGTF+N+Q ++ RYVEL EKDVVKFG S+REYVLLH++SK Sbjct: 33 TLYLHRQSAYLIGRDRKVADIPIDHPSCSKQHAAIQFRLVN-YDRPDGTAGRTVRPYIIDLEAANGTFVNNQKIESKRYVELFEKDVVKFGFSSREYVLLHEESK 136
BLAST of mRNA_C-tenellus_contig11545.1.1 vs. uniprot
Match: A0A836CP18_9STRA (Smad nuclear interacting protein-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP18_9STRA) HSP 1 Score: 154 bits (389), Expect = 2.540e-44 Identity = 70/106 (66.04%), Postives = 91/106 (85.85%), Query Frame = 1 Query: 4 TLHIHRQSAYLVGRERRVADIVVDHPSCSKQHAVIQYRLFERVDEKEGVTRRSVRPYIMDLESTNGTFINSQPVDPARYVELKEKDVVKFGTSTREYVLLHDQSKG 321 TL++HRQSAYL+GRER++ADI VDHPSCSKQHAV+Q+RL E V+E + T R+VRPY++DLESTNGT++N + ++ RYVEL E D ++FG STREYVLLHD+S+G Sbjct: 184 TLYVHRQSAYLIGRERKIADIPVDHPSCSKQHAVLQFRLKETVNEAKMETVRTVRPYVLDLESTNGTWLNKERIEAGRYVELMEGDCLRFGNSTREYVLLHDKSQG 289
BLAST of mRNA_C-tenellus_contig11545.1.1 vs. uniprot
Match: A0A6J8CI05_MYTCO (SNIP1 n=2 Tax=Mytilus TaxID=6548 RepID=A0A6J8CI05_MYTCO) HSP 1 Score: 153 bits (386), Expect = 2.640e-43 Identity = 72/103 (69.90%), Postives = 86/103 (83.50%), Query Frame = 1 Query: 7 LHIHRQSAYLVGRERRVADIVVDHPSCSKQHAVIQYRLFERVDEKEGVTRRSVRPYIMDLESTNGTFINSQPVDPARYVELKEKDVVKFGTSTREYVLLHDQS 315 LHIHR SAYL+GRERRVADI VDHPSCSKQHAV+Q+RL E + +G T R V PY++DL S NGTF+N+Q +DP RYVEL EKD+VKFG S+REYVLLHD++ Sbjct: 233 LHIHRSSAYLIGRERRVADIPVDHPSCSKQHAVLQFRLVE-FERSDGTTGRRVCPYVIDLNSANGTFVNNQKIDPERYVELMEKDMVKFGFSSREYVLLHDKT 334
BLAST of mRNA_C-tenellus_contig11545.1.1 vs. uniprot
Match: UPI0018D69422 (FHA domain-containing protein DDL-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D69422) HSP 1 Score: 154 bits (388), Expect = 3.180e-43 Identity = 74/106 (69.81%), Postives = 90/106 (84.91%), Query Frame = 1 Query: 7 LHIHRQSAYLVGRERRVADIVVDHPSCSKQHAVIQYRL--FERVDEKEGVTRRSVRPYIMDLESTNGTFINSQPVDPARYVELKEKDVVKFGTSTREYVLLHDQSK 318 +HIHRQSAYL+GRER +AD+ +DHPSCSKQHAV+QYRL +ER D G T + VRPYI+DLES+NGT+IN+ ++P RY EL+EKDVVKFG STREYVLLHD+SK Sbjct: 273 VHIHRQSAYLLGRERLIADLPIDHPSCSKQHAVLQYRLVKYERAD---GTTGKRVRPYIIDLESSNGTYINNNRIEPKRYYELQEKDVVKFGYSTREYVLLHDKSK 375
BLAST of mRNA_C-tenellus_contig11545.1.1 vs. uniprot
Match: D5LG94_BRABE (SNIP1 n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=D5LG94_BRABE) HSP 1 Score: 150 bits (379), Expect = 3.920e-43 Identity = 71/103 (68.93%), Postives = 87/103 (84.47%), Query Frame = 1 Query: 7 LHIHRQSAYLVGRERRVADIVVDHPSCSKQHAVIQYRLFERVDEKEGVTRRSVRPYIMDLESTNGTFINSQPVDPARYVELKEKDVVKFGTSTREYVLLHDQS 315 LHIHRQSAYL+GRER VADI +DHPSCSKQHA +QYRL + ++ +G T R V+PYI+DLES NGT++N+Q ++ +RYVEL EKDVVKFG S+REYVLLHD S Sbjct: 147 LHIHRQSAYLLGRERLVADIPIDHPSCSKQHAALQYRLVD-YEKPDGTTGRRVKPYIIDLESANGTYVNNQRIEASRYVELMEKDVVKFGYSSREYVLLHDTS 248
BLAST of mRNA_C-tenellus_contig11545.1.1 vs. uniprot
Match: A0A1B6E2L4_9HEMI (FHA domain-containing protein n=1 Tax=Clastoptera arizonana TaxID=38151 RepID=A0A1B6E2L4_9HEMI) HSP 1 Score: 151 bits (382), Expect = 4.260e-43 Identity = 70/105 (66.67%), Postives = 87/105 (82.86%), Query Frame = 1 Query: 4 TLHIHRQSAYLVGRERRVADIVVDHPSCSKQHAVIQYRLFERVDEKEGVTRRSVRPYIMDLESTNGTFINSQPVDPARYVELKEKDVVKFGTSTREYVLLHDQSK 318 TLH+HRQSAYL+GRER++ADI VDHPSCSKQHAV+QYRL E G T + VRPYI+DLES NGT++N+Q +D +Y+EL EKDV+KFG S+R+YVLLH+ SK Sbjct: 197 TLHLHRQSAYLIGRERKIADIPVDHPSCSKQHAVLQYRLVTFTREN-GTTGKRVRPYIIDLESANGTYVNNQKIDSKKYIELLEKDVIKFGYSSRDYVLLHEHSK 300
BLAST of mRNA_C-tenellus_contig11545.1.1 vs. uniprot
Match: A0A6P5GD77_ANACO (FHA domain-containing protein DDL-like isoform X4 n=1 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5GD77_ANACO) HSP 1 Score: 149 bits (377), Expect = 4.830e-43 Identity = 69/105 (65.71%), Postives = 85/105 (80.95%), Query Frame = 1 Query: 7 LHIHRQSAYLVGRERRVADIVVDHPSCSKQHAVIQYRLFERVDEKEGVTRRSVRPYIMDLESTNGTFINSQPVDPARYVELKEKDVVKFGTSTREYVLLHDQSKG 321 L++HRQS YL GRERR+ADI DHPSCSKQHAV+QYRL E+ ++ +G+ + VRPY+MDL+STNGTFIN ++P RY EL EKD VKFG S+REYVLLH+ S G Sbjct: 143 LYVHRQSCYLFGRERRIADIPTDHPSCSKQHAVLQYRLVEK-EQLDGLMSKQVRPYLMDLDSTNGTFINDNRIEPRRYYELFEKDTVKFGNSSREYVLLHENSAG 246 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11545.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig11545.1.1 >prot_C-tenellus_contig11545.1.1 ID=prot_C-tenellus_contig11545.1.1|Name=mRNA_C-tenellus_contig11545.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=108bp ATLHIHRQSAYLVGRERRVADIVVDHPSCSKQHAVIQYRLFERVDEKEGVback to top mRNA from alignment at C-tenellus_contig11545:466..2309+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig11545.1.1 ID=mRNA_C-tenellus_contig11545.1.1|Name=mRNA_C-tenellus_contig11545.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1844bp|location=Sequence derived from alignment at C-tenellus_contig11545:466..2309+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig11545:466..2309+ >mRNA_C-tenellus_contig11545.1.1 ID=mRNA_C-tenellus_contig11545.1.1|Name=mRNA_C-tenellus_contig11545.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=324bp|location=Sequence derived from alignment at C-tenellus_contig11545:466..2309+ (Choristocarpus tenellus KU2346)back to top |