mRNA_C-tenellus_contig11535.4.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig11535.4.1 vs. uniprot
Match: D7G1U0_ECTSI (Altered inheritance of mitochondria protein 24, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1U0_ECTSI) HSP 1 Score: 184 bits (466), Expect = 1.340e-52 Identity = 90/114 (78.95%), Postives = 103/114 (90.35%), Query Frame = 2 Query: 365 MCSVVEGQESQIVTIELEPNQMIRAEAGNLVFMEDGIEMDTSTGGGMSSMFKRVITGQNMFVTDYVNKGLVNKRVALGTDVPSKIIRLPLSDYGGAVVCQRGAFLAGSHSIEIE 706 M S VEGQESQ+VT ELEP Q+IRAEAGNLVFMEDGIEMDT+TGGG SSMF+RVITGQNMFVTDYVN+G + +V LGTDVPSKI+RLPL+ YGG V+CQRGAFLAGSH+I+I+ Sbjct: 1 MASKVEGQESQMVTFELEPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRRVITGQNMFVTDYVNRGDASGKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQ 114
BLAST of mRNA_C-tenellus_contig11535.4.1 vs. uniprot
Match: A0A7S4QQK5_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QQK5_9STRA) HSP 1 Score: 155 bits (392), Expect = 2.070e-42 Identity = 97/215 (45.12%), Postives = 139/215 (64.65%), Query Frame = 2 Query: 86 KHLFSR---KVYPPLSLHPPHSATLHNFGYTLETTMASRLV-PLARRGVLQYHSRNPRLIRYVVRPLSSVQKQSDNAKEPE--VTNIDRAALAPPIDFDMCSVVEGQESQIVTIELEPNQMIRAEAGNLVFMEDGIEMDTSTGGGMSSMFKRVITGQNMFVTDYVNKGLVNKR--VALGTDVPSKIIRLPLSDYGGAVVCQRGAFLAGSHSIEIE 706 KHL S K+ S P +AT+ N T ++S+ + P++ V HS + L + R +S+ + D A+ PE +T+ D PI+FD+ S +EG+ESQIVT+ +EP Q++RAE+G L++M DGIEM+T++GGGMS+ FKR++TGQN+F++DY G R VALGTD PSKIIRL + YGG +VCQ+GA L SH+I+IE Sbjct: 19 KHLLSPTSCKLLVRQSAAPSIAATIQNI-----TNISSKTIFPISF--VKNVHSCSSSLTLGMTRSMSTSSSR-DVARVPEGGLTSSDGVVATHPINFDIASKIEGKESQIVTVAIEPGQVLRAESGALMYMTDGIEMNTTSGGGMSAGFKRLLTGQNVFISDYTYTGESGTRGLVALGTDFPSKIIRLNPNQYGGKIVCQKGALLCASHTIDIE 225
BLAST of mRNA_C-tenellus_contig11535.4.1 vs. uniprot
Match: A0A7S4QQY9_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QQY9_9STRA) HSP 1 Score: 155 bits (392), Expect = 5.110e-42 Identity = 97/215 (45.12%), Postives = 139/215 (64.65%), Query Frame = 2 Query: 86 KHLFSR---KVYPPLSLHPPHSATLHNFGYTLETTMASRLV-PLARRGVLQYHSRNPRLIRYVVRPLSSVQKQSDNAKEPE--VTNIDRAALAPPIDFDMCSVVEGQESQIVTIELEPNQMIRAEAGNLVFMEDGIEMDTSTGGGMSSMFKRVITGQNMFVTDYVNKGLVNKR--VALGTDVPSKIIRLPLSDYGGAVVCQRGAFLAGSHSIEIE 706 KHL S K+ S P +AT+ N T ++S+ + P++ V HS + L + R +S+ + D A+ PE +T+ D PI+FD+ S +EG+ESQIVT+ +EP Q++RAE+G L++M DGIEM+T++GGGMS+ FKR++TGQN+F++DY G R VALGTD PSKIIRL + YGG +VCQ+GA L SH+I+IE Sbjct: 19 KHLLSPTSCKLLVRQSAAPSIAATIQNI-----TNISSKTIFPISF--VKNVHSCSSSLTLGMTRSMSTSSSR-DVARVPEGGLTSSDGVVATHPINFDIASKIEGKESQIVTVAIEPGQVLRAESGALMYMTDGIEMNTTSGGGMSAGFKRLLTGQNVFISDYTYTGESGTRGLVALGTDFPSKIIRLNPNQYGGKIVCQKGALLCASHTIDIE 225
BLAST of mRNA_C-tenellus_contig11535.4.1 vs. uniprot
Match: A0A1Z5KFL0_FISSO (Altered inheritance of mitochondria protein 24, mitochondrial n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KFL0_FISSO) HSP 1 Score: 154 bits (388), Expect = 5.250e-42 Identity = 70/135 (51.85%), Postives = 106/135 (78.52%), Query Frame = 2 Query: 302 AKEPEVTNIDRAALAPPIDFDMCSVVEGQESQIVTIELEPNQMIRAEAGNLVFMEDGIEMDTSTGGGMSSMFKRVITGQNMFVTDYVNKGLVNKRVALGTDVPSKIIRLPLSDYGGAVVCQRGAFLAGSHSIEIE 706 ++ P +T++D + PIDFD+ + +EG ESQIVTIEL PNQ++RAE+G ++++ +G+EM+T+TGGG+S+ F+R++TGQN F++DY G RVALGTD PSKI+RL + +YGG +VCQ+GA L SH+I+++ Sbjct: 32 SQTPTLTSVD-GVVGEPIDFDLAAKIEGNESQIVTIELRPNQVLRAESGAMMYLTEGVEMNTTTGGGLSAGFRRMMTGQNFFISDYTYTGNTVGRVALGTDFPSKILRLNVPEYGGKLVCQKGALLCASHTIDVQ 165
BLAST of mRNA_C-tenellus_contig11535.4.1 vs. uniprot
Match: A0A7S0C9P2_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=6 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C9P2_9STRA) HSP 1 Score: 153 bits (386), Expect = 9.670e-42 Identity = 78/136 (57.35%), Postives = 103/136 (75.74%), Query Frame = 2 Query: 314 EVTNIDRAA---LAPPIDFDMCSVVEGQESQIVTIELEPNQMIRAEAGNLVFMEDGIEMDTSTGGGMSSMFKRVITGQNMFVTDYVNKGLVNKR--VALGTDVPSKIIRLPLSDYGGAVVCQRGAFLAGSHSIEIE 706 E+TN +A + PIDFD+ S +EG ESQIVTIELEPNQ++RAE+G +++M +G+ M+T+TGGGMS+ FKR++TGQN F++DY G + VALGTD PSKIIRL + DYGG +VCQ+GA L SH+I IE Sbjct: 21 EITNAATSADGVVGLPIDFDVSSKIEGNESQIVTIELEPNQVLRAESGAMMYMTEGVTMETTTGGGMSAGFKRMMTGQNAFISDYRYDGEPGTKGLVALGTDFPSKIIRLDVKDYGGKIVCQKGALLCASHTINIE 156
BLAST of mRNA_C-tenellus_contig11535.4.1 vs. uniprot
Match: A0A6U0KGL8_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0KGL8_9STRA) HSP 1 Score: 147 bits (370), Expect = 3.980e-40 Identity = 70/131 (53.44%), Postives = 98/131 (74.81%), Query Frame = 2 Query: 320 TNIDRAALAPPIDFDMCSVVEGQESQIVTIELEPNQMIRAEAGNLVFMEDGIEMDTSTGGGMSSMFKRVITGQNMFVTDYVNKG--LVNKRVALGTDVPSKIIRLPLSDYGGAVVCQRGAFLAGSHSIEIE 706 T+ D PIDFD+ S +EG ESQIVT+ LEP Q++RAE+G+++FM DGI M+T+TGGGMS+ FKR++TGQN+F++D+ +G +ALGTD PSKI+RL + YGG +V Q+GA L SH+++IE Sbjct: 91 TSSDGVVATHPIDFDVASKIEGNESQIVTVALEPGQVLRAESGSMMFMTDGITMETTTGGGMSAGFKRMLTGQNVFISDFRYEGEPATTGLIALGTDFPSKIVRLNIKQYGGKIVAQKGALLCASHTVDIE 221
BLAST of mRNA_C-tenellus_contig11535.4.1 vs. uniprot
Match: A0A7S1VUA2_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VUA2_9STRA) HSP 1 Score: 150 bits (378), Expect = 7.840e-40 Identity = 69/120 (57.50%), Postives = 99/120 (82.50%), Query Frame = 2 Query: 350 PIDFDMCSVVEGQESQIVTIELEPNQMIRAEAGNLVFMEDGIEMDTSTGGGMSSMFKRVITGQNMFVTDYV-NKGLVNKRVALGTDVPSKIIRLPLSDYGGAVVCQRGAFLAGSHSIEIE 706 PI+FD+ + +EG ESQIVT+ LEPNQ++RAE+G ++FM DG+EM+T+TGGG+S+ F+R++TGQN F++DYV N+ +VALGTD PSKI+RL +++YGG + CQ+GA L SH+I+IE Sbjct: 119 PINFDVAAKIEGNESQIVTVTLEPNQVLRAESGAMMFMTDGVEMNTTTGGGLSTGFQRMLTGQNFFISDYVYNRPTGKGQVALGTDFPSKIVRLNVAEYGGKITCQKGALLCASHTIDIE 238
BLAST of mRNA_C-tenellus_contig11535.4.1 vs. uniprot
Match: A0A7S3L1B2_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L1B2_9STRA) HSP 1 Score: 143 bits (360), Expect = 7.600e-39 Identity = 73/138 (52.90%), Postives = 99/138 (71.74%), Query Frame = 2 Query: 293 SDNAKEPEVTNIDRAALAPPIDFDMCSVVEGQESQIVTIELEPNQMIRAEAGNLVFMEDGIEMDTSTGGGMSSMFKRVITGQNMFVTDYVNKGLVNK-RVALGTDVPSKIIRLPLSDYGGAVVCQRGAFLAGSHSIEI 703 +D A PE PIDFD+ S +EG ESQIVTI LEP Q++RAE+G +++M G+EM+T+TGGG+SS F R++TGQN F++DY +G +VALGTD PSKI+RL + +YGG +VCQ+GA L SH+I+I Sbjct: 52 NDLAVPPESRLSKDGVAGRPIDFDIQSKIEGNESQIVTITLEPGQVLRAESGAMMYMTAGVEMNTTTGGGLSSGFSRMLTGQNFFISDYSYQGETGTGQVALGTDFPSKILRLNVPEYGGKLVCQKGALLCASHTIDI 189
BLAST of mRNA_C-tenellus_contig11535.4.1 vs. uniprot
Match: A0A485LR40_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LR40_9STRA) HSP 1 Score: 148 bits (374), Expect = 9.160e-39 Identity = 69/146 (47.26%), Postives = 101/146 (69.18%), Query Frame = 2 Query: 269 PLSSVQKQSDNAKEPEVTNIDRAALAPPIDFDMCSVVEGQESQIVTIELEPNQMIRAEAGNLVFMEDGIEMDTSTGGGMSSMFKRVITGQNMFVTDYVNKGLVNKRVALGTDVPSKIIRLPLSDYGGAVVCQRGAFLAGSHSIEIE 706 P+SS + P T ++ PIDF + + GQESQIV I L+PNQ +RAE+G +++M DG++MDT+T GG+ KR++TG+N F+T+Y G + +V LGT VPSKI+ + L+D+GG+++CQ+GAFLAGSH+I IE Sbjct: 82 PVSSPSSNPPTMESPSATAVEEVPQYTPIDFSTAAQIVGQESQIVHITLQPNQKLRAESGAMIYMTDGVQMDTNTAGGVQQGLKRMMTGENFFLTEYSYTGTSSGQVCLGTSVPSKIVHMQLADFGGSLICQKGAFLAGSHTIGIE 227
BLAST of mRNA_C-tenellus_contig11535.4.1 vs. uniprot
Match: A0A7S2WLF3_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WLF3_9STRA) HSP 1 Score: 145 bits (366), Expect = 1.130e-38 Identity = 70/138 (50.72%), Postives = 100/138 (72.46%), Query Frame = 2 Query: 293 SDNAKEPEVTNIDRAALAPPIDFDMCSVVEGQESQIVTIELEPNQMIRAEAGNLVFMEDGIEMDTSTGGGMSSMFKRVITGQNMFVTDYVNKGLVNKRVALGTDVPSKIIRLPLSDYGGAVVCQRGAFLAGSHSIEIE 706 S++ +E V + D IDF+ S +EG +SQIVT+ LEP Q++RAE+G +++M DG+EM+TSTGGG+ + FKR +TGQN+F++DY KG VALGTD PSKI+RL L ++ G +VCQ+GA L SH+++IE Sbjct: 29 SNSVEEAVVVSSDGVVATHAIDFNTASRIEGSDSQIVTVRLEPGQVLRAESGGMMYMTDGVEMNTSTGGGVGAGFKRFLTGQNVFISDYTYKGDRFGIVALGTDFPSKIMRLSLPEWDGKIVCQKGALLCASHTVDIE 166 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11535.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig11535.4.1 >prot_C-tenellus_contig11535.4.1 ID=prot_C-tenellus_contig11535.4.1|Name=mRNA_C-tenellus_contig11535.4.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=175bp MASRLVPLARRGVLQYHSRNPRLIRYVVRPLSSVQKQSDNAKEPEVTNIDback to top mRNA from alignment at C-tenellus_contig11535:3306..5205+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig11535.4.1 ID=mRNA_C-tenellus_contig11535.4.1|Name=mRNA_C-tenellus_contig11535.4.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1900bp|location=Sequence derived from alignment at C-tenellus_contig11535:3306..5205+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig11535:3306..5205+ >mRNA_C-tenellus_contig11535.4.1 ID=mRNA_C-tenellus_contig11535.4.1|Name=mRNA_C-tenellus_contig11535.4.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=525bp|location=Sequence derived from alignment at C-tenellus_contig11535:3306..5205+ (Choristocarpus tenellus KU2346)back to top |