mRNA_C-tenellus_contig1153.4.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig1153.4.1 vs. uniprot
Match: D8LFH4_ECTSI (Short-chain dehydrogenase/reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFH4_ECTSI) HSP 1 Score: 128 bits (321), Expect = 1.870e-33 Identity = 61/92 (66.30%), Postives = 73/92 (79.35%), Query Frame = 1 Query: 1 ETPVFVGRAVAALCADPKIMSKTGKVQVVAELAKEYGFSDTNGLIPPSIRSLRFMLPAYVFPKL---GIDVPSTSVPDWLLPFDFLRNGKPP 267 ETP F GRAVAAL ADP+I+ KTGKVQ+VAELAK+YGF+D G PPSIRSLRF+LP Y+FPK+ G + ++SVPDWLLP + NGKPP Sbjct: 320 ETPFFTGRAVAALAADPEILKKTGKVQIVAELAKQYGFTDVGGDTPPSIRSLRFLLPTYLFPKILPEGTKIDTSSVPDWLLPMFIMANGKPP 411
BLAST of mRNA_C-tenellus_contig1153.4.1 vs. uniprot
Match: A0A7S3USF7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USF7_HETAK) HSP 1 Score: 102 bits (253), Expect = 6.980e-24 Identity = 57/94 (60.64%), Postives = 66/94 (70.21%), Query Frame = 1 Query: 1 ETPVFVGRAVAALCADPKIMSKTGKVQVVAELAKEYGFSDTNGLIPPSIRSLRFMLPAYVFPKLGIDVPS----TSVPDWLLPFDFLRNGKPPE 270 ETP F GRAVAAL DP+I +K+GKVQVVAELA EYGF+D NGL PPSIRS RF+ P +V KL +V + VPD LPF +L G PPE Sbjct: 269 ETPEFTGRAVAALALDPRIKAKSGKVQVVAELASEYGFTDKNGLQPPSIRSARFLYPGFVKKKLPREVANLIDDARVPDLRLPF-WLMAGPPPE 361
BLAST of mRNA_C-tenellus_contig1153.4.1 vs. uniprot
Match: A0A6U5IRZ3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A6U5IRZ3_9STRA) HSP 1 Score: 100 bits (250), Expect = 1.330e-23 Identity = 48/91 (52.75%), Postives = 62/91 (68.13%), Query Frame = 1 Query: 1 ETPVFVGRAVAALCADPKIMSKTGKVQVVAELAKEYGFSDTNGLIPPSIRSLRFMLPAYVFPK-LGIDVPSTSVPDWLLPFDFLRNGKPPE 270 E+P F GRAV A+ DP M K+G QVVAELA EYGF+D +G PPSIRSL+F+LP+Y F + +P +PDW LPF + G+PP+ Sbjct: 237 ESPRFTGRAVVAVATDPNNMEKSGTFQVVAELADEYGFTDVDGKKPPSIRSLKFLLPSYAFDEETRKKIPDWMIPDWKLPFSVMAQGRPPD 327
BLAST of mRNA_C-tenellus_contig1153.4.1 vs. uniprot
Match: A0A7S2GC83_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GC83_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 6.320e-23 Identity = 54/96 (56.25%), Postives = 63/96 (65.62%), Query Frame = 1 Query: 1 ETPVFVGRAVAALCADPKIMS-KTGKVQVVAELAKEYGFSDTNGLIPPSIRSLRFMLPAYVFPKLGID---VPS---TSVPDWLLPFDFLRNGKPP 267 ETP F G AV L P IM ++G VQVVAELAKE GF+D NG PPSIRSLRF+LP YVFP + + VPS +VPD+LLP+ G PP Sbjct: 19 ETPRFSGAAVTRLATSPTIMEPRSGSVQVVAELAKELGFTDENGNSPPSIRSLRFLLPNYVFPSIEKESGPVPSWIKDNVPDYLLPWSVFSGGPPP 114
BLAST of mRNA_C-tenellus_contig1153.4.1 vs. uniprot
Match: A0A1Z5JS15_FISSO (Dehydrogenase/reductase SDR family member 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JS15_FISSO) HSP 1 Score: 95.1 bits (235), Expect = 4.050e-21 Identity = 45/91 (49.45%), Postives = 64/91 (70.33%), Query Frame = 1 Query: 1 ETPVFVGRAVAALCADPKIMSKTGKVQVVAELAKEYGFSDTNGLIPPSIRSLRFMLPAYVFPK-LGIDVPSTSVPDWLLPFDFLRNGKPPE 270 E+P G+A+ A+ ADP M K+G QVVAELA+EYGF++ +G PPSIRSLRF+LP+Y + + +PS +PD+ LPF + G+PP+ Sbjct: 314 ESPALTGKAIVAVAADPNNMKKSGSYQVVAELAQEYGFTEDDGRTPPSIRSLRFLLPSYAMDETIRKKIPSWLIPDFKLPFWIMSQGQPPK 404
BLAST of mRNA_C-tenellus_contig1153.4.1 vs. uniprot
Match: A0A0M0K530_9EUKA (Short-chain dehydrogenase reductase sdr n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K530_9EUKA) HSP 1 Score: 89.0 bits (219), Expect = 4.380e-20 Identity = 49/100 (49.00%), Postives = 64/100 (64.00%), Query Frame = 1 Query: 1 ETPVFVGRAVAALC---ADPKIMSKTGKVQVVAELAKEYGFSDTNGLIPPSIRSLRFMLPAYVFPKL----GIDVPS---TSVPDWLLPFDFLRNGKPPE 270 ETP G+AV AL AD + +GKV VVAELAKE GF++ +G +PPSIRSL+++ P +VFP + G VP ++VPDWLLP+ G PPE Sbjct: 98 ETPALSGKAVCALAGLGADVLLTKYSGKVAVVAELAKELGFAEDDGSVPPSIRSLKYLAPNFVFPAIERESGKPVPDWMKSAVPDWLLPWSVFSGGPPPE 197
BLAST of mRNA_C-tenellus_contig1153.4.1 vs. uniprot
Match: A0A7S2Q2P0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q2P0_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 7.830e-20 Identity = 51/97 (52.58%), Postives = 68/97 (70.10%), Query Frame = 1 Query: 1 ETPVFVGRAVAALCADPKIMS-KTGKVQVVAELAKEYGFSDTNGLIPPSIRSLRFMLPAYVFPKL----GIDVPS---TSVPDWLLPFDFLRNGKPP 267 ETP F GRA+A L A+ +M ++GKV VVAELAKE GF+D +G +PPSIRSL+F+LP +VFP++ G +PS +VPD+LLP+ G PP Sbjct: 313 ETPRFSGRAMALLTANSDMMKERSGKVVVVAELAKELGFTDVDGRLPPSIRSLKFILPNFVFPQIEKESGSSLPSWVTDNVPDYLLPWSTFSGGPPP 409
BLAST of mRNA_C-tenellus_contig1153.4.1 vs. uniprot
Match: A0A7S3QJA7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJA7_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 3.070e-19 Identity = 50/99 (50.51%), Postives = 67/99 (67.68%), Query Frame = 1 Query: 1 ETPVFVGRAVAALCADPK--IMSKTGKVQVVAELAKEYGFSDTNGLIPPSIRSLRFMLPAYVFPKL----GIDVPS---TSVPDWLLPFDFLRNGKPPE 270 ETP F GRAV L + PK +M+++G V+VVAEL KE GF+D NG +P SIRSL+++LP +VFP++ G VP+ +VPD LLP+ G PPE Sbjct: 274 ETPAFSGRAVVKLASLPKKDMMARSGNVEVVAELGKEMGFTDVNGNLPASIRSLQYLLPNFVFPQVEKESGKPVPNWIKDNVPDILLPWSVFSGGPPPE 372
BLAST of mRNA_C-tenellus_contig1153.4.1 vs. uniprot
Match: A0A7S0LBI5_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LBI5_9EUKA) HSP 1 Score: 86.3 bits (212), Expect = 5.740e-18 Identity = 47/97 (48.45%), Postives = 66/97 (68.04%), Query Frame = 1 Query: 1 ETPVFVGRAVAALC--ADPKIMSKTGKVQVVAELAKEYGFSDTNGLIPPSIRSLRFMLPAYVFPKL---GIDVPS---TSVPDWLLPFDFLRNGKPP 267 ET F GRAV AL + +++ ++G+VQVVAELAKE+ F + +G PPSIRSL F+LP Y FP++ G+ +P+ +SVPD LLP+ +G PP Sbjct: 271 ETAAFSGRAVTALAGLSRAELLERSGRVQVVAELAKEFDFLEADGSRPPSIRSLAFLLPNYAFPQMEAGGLRIPAWVRSSVPDVLLPWSIFSSGSPP 367
BLAST of mRNA_C-tenellus_contig1153.4.1 vs. uniprot
Match: A0A7S4EH97_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EH97_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 6.940e-18 Identity = 47/101 (46.53%), Postives = 67/101 (66.34%), Query Frame = 1 Query: 1 ETPVFVGRAVAALCADPK--IMSKTGKVQVVAELAKEYGFSDTNGLIPPSIRSLRFMLPAYVFPKL------GIDVPS---TSVPDWLLPFDFLRNGKPPE 270 E+P F G+AV L A PK +M ++G V+VVAELAKE+ F+D +G PPSIRSL+++LP +VFP + G ++P ++PD LLP+ +G PPE Sbjct: 303 ESPSFSGKAVVELAALPKTTMMERSGNVEVVAELAKEFDFNDLDGNRPPSIRSLKYLLPNFVFPSIEKELEDGKEIPDWIKNNIPDILLPWSTFSSGPPPE 403 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1153.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1153.4.1 >prot_C-tenellus_contig1153.4.1 ID=prot_C-tenellus_contig1153.4.1|Name=mRNA_C-tenellus_contig1153.4.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=91bp ETPVFVGRAVAALCADPKIMSKTGKVQVVAELAKEYGFSDTNGLIPPSIRback to top mRNA from alignment at C-tenellus_contig1153:12335..12920- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig1153.4.1 ID=mRNA_C-tenellus_contig1153.4.1|Name=mRNA_C-tenellus_contig1153.4.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=586bp|location=Sequence derived from alignment at C-tenellus_contig1153:12335..12920- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig1153:12335..12920- >mRNA_C-tenellus_contig1153.4.1 ID=mRNA_C-tenellus_contig1153.4.1|Name=mRNA_C-tenellus_contig1153.4.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=273bp|location=Sequence derived from alignment at C-tenellus_contig1153:12335..12920- (Choristocarpus tenellus KU2346)back to top |