mRNA_C-tenellus_contig115.5.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig115.5.1 vs. uniprot
Match: A0A6H5JC51_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JC51_9PHAE) HSP 1 Score: 326 bits (835), Expect = 5.300e-100 Identity = 199/343 (58.02%), Postives = 243/343 (70.85%), Query Frame = 1 Query: 349 PQAQRILNLPLSKSYMVGFTLNEDVWRTRCVGETWRMPAHTALLGKKWRNVYADLVSSLALVEGTSKFS--SGLHENVLAVASVLDQYHTLEEMARTCFNRLGQLLEFDAARRTMNMNRLRIMDHALWTLQAFPDDADIQLKVLRFLVLAGRPIGGTEGMVFHRGPASGSALETFAPAGEGVSAVLASMARHLHNGPVQAMSCWSMVNLALLPIQKENLLRLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPDRGSSSVMSTETMKNVVVNVLAAIHSFSENAAIVNRGCLVLHNIALDAGHFDTLVEMGAPQELVLAMGRHPSDAMLCQCATGTLRRLG 1371 P+AQR L PLSK Y+ FTL E++W+ RCV E W++P +T WR ++ DLV L+LV+GT++ + G + NV+A+ VLD Y TL EM R CF+RLG LL + AR + RIMDHALW L+ +PDD D+ LK+LRFLVLAGRP G EG V R PAS L F P+G GV AVLA M RH N VQA++CWS+VNLAL+P QK +L R GG XXXXXXXXXXXXXXXXXXXXXXXXX TPD S ++ +TMK VV V++AI +FS IVNR CLVLHNIALD GH LV +GAP+EL+ A+G+HP+DA+L QCATGTLRRLG Sbjct: 40 PEAQRTLQAPLSKVYLSSFTLEENIWKARCV-EQWKVPPNTTC--HAWRTLHIDLVHCLSLVDGTAEETCGGGDYGNVVAIVQVLDAYRTLAEMTRACFDRLGHLLNSEEAREAVKCVDWRIMDHALWALKTYPDDVDLLLKILRFLVLAGRPAGRMEGAVMSRPPASDGPLRAFGPSGNGVEAVLACMERHRSNAAVQAVACWSLVNLALIPGQKRSLCRQGGVLXXXXXXXXXXXXXXXXXXXXXXXXXLVTPDVTSEKIIQPDTMKAVVAIVVSAIQAFSNMVTIVNRACLVLHNIALDPGHLGALVAIGAPEELLHAIGKHPTDALLIQCATGTLRRLG 379
BLAST of mRNA_C-tenellus_contig115.5.1 vs. uniprot
Match: F0Y6I8_AURAN (Expressed protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6I8_AURAN) HSP 1 Score: 134 bits (336), Expect = 1.410e-29 Identity = 132/352 (37.50%), Postives = 183/352 (51.99%), Query Frame = 1 Query: 349 PQAQRILNLPLSKSYMVGFTLNEDVWRTRCVGETWRMPAHTALLGK---KWRNVYADLVSSLALVEGTSKFSSGLHENVLAVASVLDQYHTLEEMARTCFNRLGQLLEFDAARRTMNMNRLRIMDHALWTLQAFPDDADIQLKVLRFLVLAGRPIGGTEGMVFHRGPASGSALETFAPAGEGVSAVLASMARHLHNGPVQAMSCWSMVNLALLPIQKENLLRLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPDRGS---SSVMSTETMKNVVVNVLAAIHSFSENAAIVNRGCLVLHNIALDAGHFDTLVEMGAPQELVLAMGRHPSDAMLCQCATGTLRRLGAEVNL 1386 P+ + P+ + + N +VW C W + A L G+ + R ++ ++ + + G S V V+ ++ + + + R C L + L + AR+ R+ + L AF A++Q+ L +V RPIGG EGMVFHRG AS L+ F G++AVLASM H VQAM CWS+VNLAL QK LL+L G XXXXXXXXXXXXXXXXXXXXXXXX P+ G+ + K VV VL A+ +F ++ +V GCLVLHN++LD G+ L+ G L A RH DA + + A TLRRLG ++L Sbjct: 108 PERHAAASPPICRQHRDRVRENREVWIQLCAEAPWHV-ARPTLEGRSVPELRRLHRSVLDASSRARGAS---------VDDVSRIMRAHEDVAGVQRRCLETLAERLHCERARKAAL--EARVTAQVVAALWAFLPAAELQVVALHCVVFLARPIGGAEGMVFHRGMAS-QGLDAFLGKRGGIAAVLASMRAHGSVDSVQAMGCWSLVNLALNHQQKLELLKLRGLDRXXXXXXXXXXXXXXXXXXXXXXXXLVIPEAGALYEDDLDLKAANKRVVRYVLGAMAAFPDSEKLVRCGCLVLHNLSLDDGNVPHLLAAGVSLPLQRA-ARHHKDADVQRSAVSTLRRLGIVLHL 445
BLAST of mRNA_C-tenellus_contig115.5.1 vs. uniprot
Match: A0A7S3ZUP6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZUP6_9STRA) HSP 1 Score: 131 bits (330), Expect = 9.490e-29 Identity = 108/331 (32.63%), Postives = 150/331 (45.32%), Query Frame = 1 Query: 406 TLNEDVWRTRCVGETWRMPAHTALLGKKWRNVYADLVSSLALVEGTSKFSSGLHENVLAVASVLDQYHTLEEMARTCFNRLGQLLEFDAARRT-MNMNRLRIMDHALWTLQAFPDDADIQLKVLRFLVLAGRPIGGTEGMVFHRGPASGSALETFAPAGEGVSAVLASMARHLHNGPVQAMSCWSMVNLALLPIQKENLLRLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPDRGSSSVMSTETMKN-----VVVNVLAAIHSFSENAAIVNRGCLVLHNIALDAGHFDTLVEMGAPQELVLAMGRHPSDAMLCQCATGTLRRLGAEV 1380 T N +VW C WR+ H + L + N L ++ VE T + + +A ++ + + + CF L L + R+ ++ + ALW F + D+Q+ L +V RPIGG EGMV+HRG AS L+ F G++AVL SM HL N VQAM CWS+VNLAL QK LL L G P+ GS S + + +N VV VLAA+ F E+ +V GCLVLHN++LD + L+ G + L A H DA + + A TLRRL V Sbjct: 137 TKNREVWAHLCSSTPWRI--HRSDLEHRPVNALRRLHRTV--VEATDSVDTA---PIADIARIMSDHARVAGVQVRCFRTLADRLHCETFRKNALDCGVASSVVRALWK---FDECDDVQVVALHCVVFLARPIGGAEGMVYHRGMAS-RGLDAFLGESGGIAAVLRSMRVHLKNSNVQAMGCWSLVNLALNHQQKLALLALDGLDAVLAAMAHHPSTLEVQFRALFALINLVIPEAGSVSTNTMDCGENAAHARVVRGVLAAMRHFPESEKLVRCGCLVLHNLSLDDKNVPHLLAFGVARPLQRAARSH-KDADVQRSAVSTLRRLRVAV 455
BLAST of mRNA_C-tenellus_contig115.5.1 vs. uniprot
Match: B7FR68_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FR68_PHATC) HSP 1 Score: 119 bits (299), Expect = 8.000e-24 Identity = 85/286 (29.72%), Postives = 132/286 (46.15%), Query Frame = 1 Query: 574 VLAVASVLDQYHTLEEMARTCFNRLGQLLEFDAARRTMNMNRLRIMDHALWTLQAFPDDADIQLKVLRFLVLAGRPIGGTEGMVFHRGPASGSALETFAPAGE-----GVSAVLASMARHLHNGPVQAMSCWSMVNLALLPIQKENLLRLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPDRG----------SSSVMSTETMKNVVVNVLAAIHSFSENAAIVNRGCLVLHNIALDAGHFDTLVEM-GAPQELVLAMGRHPSDAMLCQCATGTLRRLGAEVN 1383 + ++ + + + +E + C L LLE + R T R + D L + FPD + + +VL RP+GG EGM+FH + S + + + G++ +L SM R + +QAMSCWS+VN+AL P QKE L+ LGG P R + M E++ ++ VL A+ +F + AIVNR CLVLHN++L + +TL+ Q L + +P+D +L Q A+GTL RL +N Sbjct: 726 IFSIVNWMLAFSDVEGIQTMCLRDLPSLLEDEQQRITAQ--RAGLTDVVLRAMVTFPDSSPLHTAAFHTIVLLARPLGGREGMLFHTSMVNSSGIFSASSVASRNGKSGIAVMLDSMKRFQQDEVLQAMSCWSLVNIALAPAQKEVLVNLGGIEVTSRAMCAHPHSAEVQFRALFALINLVIPSRDQGEPLRGEVITEKEMLDESVDQIIHLVLLAMKNFCASEAIVNRACLVLHNVSLTREYHETLLCCPNCYQMLEWCLANYPTDQVLQQSASGTLHRLQLTLN 1009
BLAST of mRNA_C-tenellus_contig115.5.1 vs. uniprot
Match: A0A7S2MKG5_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MKG5_9STRA) HSP 1 Score: 112 bits (279), Expect = 3.400e-23 Identity = 100/323 (30.96%), Postives = 141/323 (43.65%), Query Frame = 1 Query: 616 EEMARTCFNRLGQLLEFDAARRTMNMNRLRIMDHALWTLQAFPDDADIQLKVLRFLVLAGRPIGGTEGMVFHRGPASGSALETFAP--AGEGVSAVLASMARHLHNGPVQAMSCWSMVNLALLPIQKENLLRLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPDR----GSSSVMST-----------------ETMKNVVVNVLAAIHSFSENAAIVNRGCLVLHNIALDAGHFDTLV-EMGAPQELVLAMGRHPSDAMLCQCATGTLRRLGAEVNLFDNDLVDDDGDLDM*KTGSELVIRR*NCRRLEEA*-EYIYLQ 1509 E + C L LLE + R T R + D L + FPD ++ LVL RP+GG EGM+FH + S + G++ +L SM R H+ +QAMSCWSMVN+AL+P QK L++LGG P GS+ M+ E + + V+ A+ +F + AI+NR CLVLHN++L+ + TL+ Q L +G + D +L Q A GTL+RL + +D DL M S IR R LE+A E IY+Q Sbjct: 1 EGIQTMCLKVLPFLLEDENQRTTAQ--RAGLTDIVLRGMVLFPDSVELHTAAFHTLVLLARPLGGKEGMLFHSAMVNASGIFNVGSNTGKNGIAVMLDSMRRFSHDEVLQAMSCWSMVNIALIPSQKTMLVKLGGISVAANAMMQHPYNAEVQFRALFALINLVIPSENLSEGSAEAMAVQEQLGEVSQTTEQEMLDENVGQIANLVVVAMKNFCSSEAILNRACLVLHNLSLNEDYHTTLLWTPNCYQMLEWCIGNYRHDRVLQQSAGGTLQRLQTTLA--------NDEDLRMRFAAS---IRAQQQRSLEQARREAIYIQ 310
BLAST of mRNA_C-tenellus_contig115.5.1 vs. uniprot
Match: A0A1Z5JKA1_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKA1_FISSO) HSP 1 Score: 112 bits (279), Expect = 1.920e-21 Identity = 83/280 (29.64%), Postives = 134/280 (47.86%), Query Frame = 1 Query: 580 AVASVLDQYHTLEEMARTCFNRLGQLLEFDAARRTMNMNRLRIMDHALWTLQAFPDDADIQLKVLRFLVLAGRPIGGTEGMVFHRGPASGSAL-ETFAPAGEG----VSAVLASMARHLHNGPVQAMSCWSMVNLALLPIQKENLLRLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPDRGSS------SVMSTETMKNVVVN-----VLAAIHSFSENAAIVNRGCLVLHNIALDAGHFDTLV-EMGAPQELVLAMGRHPSDAMLCQCATGTLRRL 1368 ++ + + + +E + C L ++E + R R + ++ L + FPD A + +VL RP+GG EGM+FH + S++ ++ P +G ++ +L S+ R ++G +QAMSCWS+VN+AL P QK+ L++LGG P S+ S +S + M + VV V+AA+ +F + AI+NR CLVLHNI+L + L+ Q L + + SD +L Q A GTL RL Sbjct: 686 SIVNWMTAFSDVEGIQTMCLKVLPPIMENEHQRSAAQ--RAGLTNNVLRAMVRFPDSAPLHTAAFHAIVLLARPLGGREGMLFHSSMVNASSIFDSGTPTDQGGKSGIAVMLDSIKRFEYDGVLQAMSCWSLVNIALAPAQKQMLVKLGGIQATANAMMIHPYDAEVQFRALFALINLVIPSVRSADQEEVGSDVSEKEMLDAVVGRVVGLVVAAMKNFCSSEAILNRACLVLHNISLSQSYHGALLWTPNCYQMLEWCLSNYKSDQVLQQSAAGTLHRL 963
BLAST of mRNA_C-tenellus_contig115.5.1 vs. uniprot
Match: A0A7S3LG40_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LG40_9STRA) HSP 1 Score: 111 bits (277), Expect = 3.720e-21 Identity = 85/295 (28.81%), Postives = 133/295 (45.08%), Query Frame = 1 Query: 574 VLAVASVLDQYHTLEEMARTCFNRLGQLLEFDAARRTMNMNRLRIMDHALWTLQAFPDDADIQLKVLRFLVLAGRPIGGTEGMVFHRGPASGSALETFAPAG-----EGVSAVLASMARHLHNGPVQAMSCWSMVNLALLPIQKENLLRLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPDRGSSSVMST---------------ETMKNVVVNVLAAIHSFSENAAIVNRGCLVLHNIALDAG-HFDTLVEMGAPQELVLAMGRHPSDAMLCQCATGTLRRLGAEVNLFDN 1395 + ++ + + + ++E + C L LLE + R M R + D L + FP + +VL RP+GG EGM+FH + S + + AG G++ +L SM R +QAMSCWS+VN+AL P QKE L++LGG P ++ + T E ++ +V V+ A+ ++ + AI+NR CLVLHN++L G H L+ Q L + + +D +L Q ATGTL RL A + D+ Sbjct: 854 IYSIVNWMVGFSSVEGIQTMCLKVLPFLLEDEQQR--MTAQRAGLTDVVLRGMVMFPKSVPLHTAAFHTIVLLARPLGGREGMLFHSSMVNASGIFSGGNAGGTNGKSGIAVMLDSMRRFESEAVLQAMSCWSLVNIALAPAQKEVLVKLGGIQATAGAMLAHPENAEVQFRALFALINLVIPSVAMTNNVDTQDTAIEDEQGNDMLDELVEQIVGLVVRAMKNYCSSKAILNRACLVLHNLSLTPGYHQHLLLIPHCYQMLEWCLANYRTDQVLQQSATGTLHRLQATLGSNDS 1146
BLAST of mRNA_C-tenellus_contig115.5.1 vs. uniprot
Match: A0A6T9YI25_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A6T9YI25_9STRA) HSP 1 Score: 108 bits (271), Expect = 1.060e-20 Identity = 83/289 (28.72%), Postives = 123/289 (42.56%), Query Frame = 1 Query: 574 VLAVASVLDQYHTLEEMARTCFNRLGQLLEFDAARRTMNMNRLRIMDHALWTLQAFPDDADIQLKVLRFLVLAGRPIGGTEGMVFHRGPASGSALETFAPAG--EGVSAVLASMARHLHNGPVQAMSCWSMVNLALLPIQKENLLRLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPDRGSSSVMST---------------------ETMKNVVVNVLAAIHSFSENAAIVNRGCLVLHNIALDAGHFDTLV-EMGAPQELVLAMGRHPSDAMLCQCATGTLRRL 1368 + ++ + + + +E + C L LLE + R T R + L + FPD + +VL RP+GG EGM+FH + S + G G++ +L SM R P+QAMSCWS+VN+AL P QK L++LGG P S S E + + V+ A+ +F + I+NR CLVLHN++L + +TL+ Q L + +PSD +L QCA GTL RL Sbjct: 355 IYSIVNWMVAFSDVEGIQTMCLRVLPFLLEDETQRTTAQ--RAGLTGIVLRGMVLFPDSVQLHTAAFHTIVLLARPLGGREGMLFHSSMVNSSGIFINGHQGGKNGIAVMLDSMRRFASEEPLQAMSCWSLVNVALAPSQKAVLVKLGGISATANAMMQHPYSAEVQFRALFALINLVIPSVNLSEETSEQRSMQEQLGEVNDATEREMLDENVGQIANLVVLAMKNFCSSQTILNRACLVLHNLSLTQEYHETLLWTPNCYQMLEWCLANYPSDQVLQQCAAGTLHRL 641
BLAST of mRNA_C-tenellus_contig115.5.1 vs. uniprot
Match: A0A7S2U985_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U985_9STRA) HSP 1 Score: 107 bits (266), Expect = 6.400e-20 Identity = 89/292 (30.48%), Postives = 130/292 (44.52%), Query Frame = 1 Query: 604 YHTLEEMARTCFNRLGQLLEFDAARRTMNMNRLRIMDHALWTLQAFPDDADIQLKVLRFLVLAGRPIGGTEGMVFHRGPASGSAL-ETFAPAGE-GVSAVLASMARHLHNGPVQAMSCWSMVNLALLPIQKENLLRLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPDRGSSS-----------------------VMSTETMKNVVVNVLAAIHSFSENAAIVNRGCLVLHNIALDAGHFDTLV-EMGAPQELVLAMGRHPSDAMLCQCATGTLRRLGAEVNLFDNDL 1401 + +E + C L LL+ + R T R + D L + FPD ++ LVL RP+GG EGM+FH + S++ +GE G++ +L SM R N +QAMSCWSMVN+AL+P QK L++LGG P S M E + + V+ A+ +F + AI+NR CLVLHN++L+ + TL+ Q L + + D +L Q A GTL+RL A ++ DNDL Sbjct: 619 FSDVEGIQVMCLKVLPFLLDDENQRTTSQ--RAGLTDLVLRGMVLFPDSVELHTAAFHALVLLARPLGGKEGMLFHSVMVNASSIFNRGTSSGEHGMAVMLDSMKRFEDNEVLQAMSCWSMVNIALIPAQKIMLVKLGGIASAANAMMNHPYNAEVQFRALFALINLVIPSENLSENGEENQVTQEHTDDAEITCPTEREMQDENVSQIANLVVVAMKNFCSSEAILNRACLVLHNLSLNEDYHTTLLWTPNCYQMLEWCIANYKHDHVLQQSAGGTLQRLQATLS-SDNDL 907
BLAST of mRNA_C-tenellus_contig115.5.1 vs. uniprot
Match: K0TK54_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TK54_THAOC) HSP 1 Score: 103 bits (256), Expect = 2.770e-19 Identity = 82/297 (27.61%), Postives = 130/297 (43.77%), Query Frame = 1 Query: 574 VLAVASVLDQYHTLEEMARTCFNRLGQLLEFDAARRTMNMNRLRIMDHALWTLQAFPDDADIQLKVLRFLVLAGRPIGGTEGMVFHRGPASGSALETFAP--AGEGVSAVLASMARHLHNGPVQAMSCWSMVNLALLPIQKENLLRLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPDR-------------------GSSSVMSTETMKNVVVN-----VLAAIHSFSENAAIVNRGCLVLHNIALDAGHFDTLV-EMGAPQELVLAMGRHPSDAMLCQCATGTLRRLGAEVN 1383 + +V + + + +E + C L LLE ++ R T R + D L + FPD ++ LVL RP+GG EGM+FH + + + G+ +L SM R + +QAMSCWS+VN+AL P+QK L++LGG P G +S + M + V V+ A+ +F + AI+NR CLVLHN++L+ + L+ Q L +G +P D +L Q A GT++RL + ++ Sbjct: 155 IYSVVNWMVAFADVEGIQIMCLKCLPYLLEDESQRTTAQ--RAGLTDSVLRAMVLFPDSIELHTVAFHTLVLLARPLGGNEGMLFHTAMVNTRGIFNNGSNCSKNGIVIMLDSMRRFAQDEILQAMSCWSLVNVALTPLQKSMLVKLGGLTVTANAMLQHPYNAEVQFRALFALINLVIPSETRPESEEMREFEREIFQQLGEVGEISEKEMLDASVGQISNLVVVAMKNFCSSEAILNRACLVLHNLSLNEEYHSILLWTPNCYQMLEWCLGNYPHDHVLQQSAGGTIQRLNSTLS 449 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig115.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig115.5.1 >prot_C-tenellus_contig115.5.1 ID=prot_C-tenellus_contig115.5.1|Name=mRNA_C-tenellus_contig115.5.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=346bp MVGFTLNEDVWRTRCVGETWRMPAHTALLGKKWRNVYADLVSSLALVEGTback to top mRNA from alignment at C-tenellus_contig115:18871..22388+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig115.5.1 ID=mRNA_C-tenellus_contig115.5.1|Name=mRNA_C-tenellus_contig115.5.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3518bp|location=Sequence derived from alignment at C-tenellus_contig115:18871..22388+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig115:18871..22388+ >mRNA_C-tenellus_contig115.5.1 ID=mRNA_C-tenellus_contig115.5.1|Name=mRNA_C-tenellus_contig115.5.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1038bp|location=Sequence derived from alignment at C-tenellus_contig115:18871..22388+ (Choristocarpus tenellus KU2346)back to top |