mRNA_C-tenellus_contig11481.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig11481.1.1 vs. uniprot
Match: D7FLH4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLH4_ECTSI) HSP 1 Score: 139 bits (349), Expect = 2.040e-36 Identity = 65/80 (81.25%), Postives = 70/80 (87.50%), Query Frame = 1 Query: 1 KETVVTSSLDKRVCVWQMPDWKLRKTFRDHNLGVQVLSYEQGTLLSAGFDWEIIAWDMERLERIGTMKGHKAPVTAVRQV 240 KE VVTSSLD+RVCVWQMP WKLR FRDH LGVQ LSY +GTLLSAGFDWEIIAWD +RLE+IGTM GHKAPVTAV Q+ Sbjct: 61 KELVVTSSLDRRVCVWQMPTWKLRAMFRDHTLGVQALSYLRGTLLSAGFDWEIIAWDADRLEKIGTMNGHKAPVTAVAQM 140
BLAST of mRNA_C-tenellus_contig11481.1.1 vs. uniprot
Match: A0A6H5JGU6_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU6_9PHAE) HSP 1 Score: 138 bits (348), Expect = 2.590e-36 Identity = 65/80 (81.25%), Postives = 69/80 (86.25%), Query Frame = 1 Query: 1 KETVVTSSLDKRVCVWQMPDWKLRKTFRDHNLGVQVLSYEQGTLLSAGFDWEIIAWDMERLERIGTMKGHKAPVTAVRQV 240 KE VVTSSLD+RVCVWQMP WKLR FRDH LGVQ LSY +GTLLSAGFDWEIIAWD +RLE+IGTM GHKAPVT V QV Sbjct: 610 KELVVTSSLDRRVCVWQMPTWKLRAMFRDHTLGVQALSYLRGTLLSAGFDWEIIAWDADRLEKIGTMNGHKAPVTTVAQV 689
BLAST of mRNA_C-tenellus_contig11481.1.1 vs. uniprot
Match: A0A8J2WQF6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WQF6_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 9.560e-8 Identity = 29/77 (37.66%), Postives = 45/77 (58.44%), Query Frame = 1 Query: 1 KETVVTSSLDKRVCVWQMPDWKLRKTFRDHNLGVQVLSYEQGTLLSAGFDWEIIAWDMERLERIGTMKGHKAPVTAV 231 K + TSSLDK+V +W + + R T H+LGV+ LSY QG L+S FD D+ E++ ++GH+ ++ V Sbjct: 536 KGLLATSSLDKKVKLWDVDNLMPRGTLCGHSLGVRCLSYAQGLLVSGAFDCXXXXXDVTSHEQVVVLEGHRRAISYV 612
BLAST of mRNA_C-tenellus_contig11481.1.1 vs. uniprot
Match: A0A0P1AVN5_PLAHL (Pleiotropic regulator 1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AVN5_PLAHL) HSP 1 Score: 52.0 bits (123), Expect = 7.580e-6 Identity = 23/78 (29.49%), Postives = 45/78 (57.69%), Query Frame = 1 Query: 4 ETVVTSSLDKRVCVWQMPDWKLRKTFRDHNLGVQVLSY--EQGTLLSAGFDWEIIAWDMERLERIGTMKGHKAPVTAV 231 + +VT L + +W + D + R + H G++ L Y + LLSAGF+++++AWD+ + + GH+AP+ ++ Sbjct: 333 DLLVTCDLQHSIQLWNLSDGRNRGSLVAHERGIRQLCYSKQHDLLLSAGFEYDVLAWDLASRQVAVKLSGHRAPLISI 410
BLAST of mRNA_C-tenellus_contig11481.1.1 vs. uniprot
Match: A0A225WUT5_9STRA (EF-hand domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WUT5_9STRA) HSP 1 Score: 51.6 bits (122), Expect = 1.030e-5 Identity = 26/78 (33.33%), Postives = 42/78 (53.85%), Query Frame = 1 Query: 4 ETVVTSSLDKRVCVWQMPDWKLRKTFRDHNLGVQVLSY--EQGTLLSAGFDWEIIAWDMERLERIGTMKGHKAPVTAV 231 + +VT L + +W + D + R H GV+ L Y + LLSAGF++E +AWD+ + + GH+AP+ V Sbjct: 344 DLLVTCDLRHTIKLWDLTDGRCRGALLSHERGVRQLCYSKQHDLLLSAGFEFEALAWDLGSRQVALKLSGHRAPLIGV 421
BLAST of mRNA_C-tenellus_contig11481.1.1 vs. uniprot
Match: A0A5D6XVE6_9STRA (EF-hand domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVE6_9STRA) HSP 1 Score: 51.2 bits (121), Expect = 1.390e-5 Identity = 24/78 (30.77%), Postives = 45/78 (57.69%), Query Frame = 1 Query: 4 ETVVTSSLDKRVCVWQMPDWKLRKTFRDHNLGVQVLSY--EQGTLLSAGFDWEIIAWDMERLERIGTMKGHKAPVTAV 231 + +V+ L + V +W + D + R H+ GV+ L+Y + LLSAGF+++ + WD+ + + + GH+AP+ V Sbjct: 373 DLLVSCDLQRSVQLWDLHDCRPRGALAAHSHGVKQLAYSAQHDLLLSAGFEYDALGWDLASRQVVLRLAGHRAPLVGV 450
BLAST of mRNA_C-tenellus_contig11481.1.1 vs. uniprot
Match: D0P0M7_PHYIT (EF-hand domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0P0M7_PHYIT) HSP 1 Score: 50.4 bits (119), Expect = 2.620e-5 Identity = 26/78 (33.33%), Postives = 42/78 (53.85%), Query Frame = 1 Query: 4 ETVVTSSLDKRVCVWQMPDWKLRKTFRDHNLGVQVLSYEQ--GTLLSAGFDWEIIAWDMERLERIGTMKGHKAPVTAV 231 + +VT L + +W + D + R H GV+ L Y + LLSAGF++E +AWD+ + + GH+AP+ V Sbjct: 295 DLLVTCDLRHTIQLWDITDGRNRGALMAHGRGVRQLCYSEHHDLLLSAGFEFEALAWDLGSRQVALKLSGHRAPLVGV 372
BLAST of mRNA_C-tenellus_contig11481.1.1 vs. uniprot
Match: V9EBU7_PHYPR (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=V9EBU7_PHYPR) HSP 1 Score: 50.4 bits (119), Expect = 2.660e-5 Identity = 26/78 (33.33%), Postives = 42/78 (53.85%), Query Frame = 1 Query: 4 ETVVTSSLDKRVCVWQMPDWKLRKTFRDHNLGVQVLSYEQ--GTLLSAGFDWEIIAWDMERLERIGTMKGHKAPVTAV 231 + +VT L + +W + D + R H GV+ L Y + LLSAGF++E +AWD+ + + GH+AP+ V Sbjct: 342 DLLVTCDLRHTIQLWDITDGRNRGALMAHERGVRQLCYSEHHDLLLSAGFEFEALAWDLASRQIALKLSGHRAPLIGV 419
BLAST of mRNA_C-tenellus_contig11481.1.1 vs. uniprot
Match: A0A329S090_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S090_9STRA) HSP 1 Score: 50.4 bits (119), Expect = 2.660e-5 Identity = 26/78 (33.33%), Postives = 42/78 (53.85%), Query Frame = 1 Query: 4 ETVVTSSLDKRVCVWQMPDWKLRKTFRDHNLGVQVLSYEQ--GTLLSAGFDWEIIAWDMERLERIGTMKGHKAPVTAV 231 + +VT L + +W + D + R H GV+ L Y + LLSAGF++E +AWD+ + + GH+AP+ V Sbjct: 343 DLLVTCDLRHTIQLWDITDGRNRGALMAHERGVRQLCYSEHHDLLLSAGFEFEALAWDLASRQVALKLSGHRAPLIGV 420
BLAST of mRNA_C-tenellus_contig11481.1.1 vs. uniprot
Match: A0A833RS06_PHYIN (EF-hand domain pair n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833RS06_PHYIN) HSP 1 Score: 50.4 bits (119), Expect = 2.660e-5 Identity = 26/78 (33.33%), Postives = 42/78 (53.85%), Query Frame = 1 Query: 4 ETVVTSSLDKRVCVWQMPDWKLRKTFRDHNLGVQVLSYEQ--GTLLSAGFDWEIIAWDMERLERIGTMKGHKAPVTAV 231 + +VT L + +W + D + R H GV+ L Y + LLSAGF++E +AWD+ + + GH+AP+ V Sbjct: 343 DLLVTCDLRHTIQLWDITDGRNRGALMAHGRGVRQLCYSEHHDLLLSAGFEFEALAWDLGSRQVALKLSGHRAPLVGV 420 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11481.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig11481.1.1 >prot_C-tenellus_contig11481.1.1 ID=prot_C-tenellus_contig11481.1.1|Name=mRNA_C-tenellus_contig11481.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=80bp KETVVTSSLDKRVCVWQMPDWKLRKTFRDHNLGVQVLSYEQGTLLSAGFDback to top mRNA from alignment at C-tenellus_contig11481:714..1903- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig11481.1.1 ID=mRNA_C-tenellus_contig11481.1.1|Name=mRNA_C-tenellus_contig11481.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1190bp|location=Sequence derived from alignment at C-tenellus_contig11481:714..1903- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig11481:714..1903- >mRNA_C-tenellus_contig11481.1.1 ID=mRNA_C-tenellus_contig11481.1.1|Name=mRNA_C-tenellus_contig11481.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=240bp|location=Sequence derived from alignment at C-tenellus_contig11481:714..1903- (Choristocarpus tenellus KU2346)back to top |