mRNA_C-tenellus_contig1148.5.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig1148.5.2 vs. uniprot
Match: D7G7V7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7V7_ECTSI) HSP 1 Score: 338 bits (868), Expect = 9.670e-110 Identity = 151/241 (62.66%), Postives = 185/241 (76.76%), Query Frame = 3 Query: 384 KRERVLASIPSKTIGSLHHPFPTEYGDHFETPMQAYQDVAGILSILAKRLGRRRKTLRIWDPYYCAGRTPRLLGELGFPLVSHQNEDFYAVVKDGRQPLHDVLVTNPPYSGDHKRRCLEYCAGSGKPWLLLIPNYVATKDYYREATVGKGPGGGGEPFYLVPRTRYVFDHPEGTGNADSPFVGVWFVHAGSYTDDLFSTAVAGSNRAFDIVRSVQELGRRGIVNSQKRLNPRQRRAAKKRK 1106 KR R + P HHPFPTEYGDHFETP+QAY+D+ L++LAK L ++RK LRIWDPYYCAGRTPRLLG+LGFP V H N+DFY VV++ RQP HDVL+TNPPYSGDHK+RCLEYC SGKPW LL+PNYVATKDYYR A +G G GGEPFY+VP +Y FDHPEGTG+ADSPF GVW+VH GS+T+ +F + ++RS+ EL + G V +++RLNPRQR+A KK++ Sbjct: 92 KRPRESLAAPH------HHPFPTEYGDHFETPLQAYRDIEVALALLAKLLDKKRKHLRIWDPYYCAGRTPRLLGQLGFPKVEHSNQDFYKVVREKRQPKHDVLITNPPYSGDHKKRCLEYCRASGKPWFLLVPNYVATKDYYRLAVLGPAAGPGGEPFYVVPENKYYFDHPEGTGHADSPFTGVWYVHCGSHTEAVFEGTITQKRGGVSVLRSLDELSQTGAVTTERRLNPRQRKALKKKR 326
BLAST of mRNA_C-tenellus_contig1148.5.2 vs. uniprot
Match: A0A6U0XTY6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U0XTY6_9STRA) HSP 1 Score: 226 bits (575), Expect = 2.970e-67 Identity = 115/228 (50.44%), Postives = 150/228 (65.79%), Query Frame = 3 Query: 438 HPFPTEYGDHFETPMQAYQDVAGILSILAKRLGRRRKTLRIWDPYYCAGRTPRLLGELGFPLVSHQNEDFYAVVKDGRQPLHDVLVTNPPYSGDHKRRCLEYCAGSGKPWLLLIPNYVATKDYYREATVGKGPGGGGEPFYL--VPRTRYVFDHPEGTGNADSPFVGVWFVHAGSYTDDLFS--TAVAGSNRAFDIVRSVQELGRRGIVNSQKRLNPRQRRAAKKRKA 1109 HPF TEYGDHFETP+ AY+ + +L +AKRLG++ K LRI+DP+YCAG + LGFP + H+NEDFY +GR P DVLVTNPPYS DHK R L +C SGKPW LL+PNYVATK YY T G G G PF++ +P +RY + HPEGTG+ +SPF +WFV A + ++ + GS ++ S+ +L + V +RLNPRQR+AA KR+A Sbjct: 9 HPFSTEYGDHFETPLIAYKHLRPVLCWIAKRLGKKPKELRIYDPFYCAGAVVGRMASLGFPRLIHRNEDFYRCESEGRVPAFDVLVTNPPYSLDHKERILNFCVTSGKPWALLMPNYVATKQYYTNLTSG-GSGAPPTPFFVAPLPGSRYQYTHPEGTGHDNSPFESMWFVDAMAGKKEVMGELSPAEGSR----VMLSIADLKQARCVRPGRRLNPRQRKAAAKRRA 231
BLAST of mRNA_C-tenellus_contig1148.5.2 vs. uniprot
Match: A0A7S1IGA0_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IGA0_9EUGL) HSP 1 Score: 223 bits (569), Expect = 2.440e-65 Identity = 114/237 (48.10%), Postives = 159/237 (67.09%), Query Frame = 3 Query: 390 ERVLASIPSKTIGSLHHPFP-TEYGDHFETPMQAYQDVAGILSILAKRLGRRRKTLRIWDPYYCAGRTPRLLGELGFPLVSHQNEDFYAVVKDGRQPLHDVLVTNPPYSGDHKRRCLEYCAGSGKPWLLLIPNYVATKDYYREATVGKGPGGGGEPFYLVPRTRYVFDHPEGTGNADSPFVGVWFVHAGSYTDDLFSTAVAGSNRAF--DIVRSVQELGRRGIVNSQKRLNPRQRRA 1091 E+V+ S +K + SL +P+ EYGDHFET QAY+D+ +L A+ + R +L I+DP+YC G R L LGF V H+ DFYA VK+G+ P HD+L+TNPPYSGDHK R LEYC SGKPW LL+PNY+ATK+YY ++T+ K EPFY V R RY+F HPEGTG+ SPF G WF++ G +T+ L+ +V R+ + R+V +L ++ +V + R+NP++R+A Sbjct: 76 EQVVCS--TKLVTSLEYPWEDVEYGDHFETCDQAYKDITPLLKEAARLMQRDASSLGIYDPFYCDGAVKRHLAALGFHTVHHEKRDFYADVKNGQVPEHDILITNPPYSGDHKERILEYCCASGKPWALLLPNYIATKNYY-QSTLAKHKQ---EPFYFVSRERYMFYHPEGTGHDTSPFEGFWFLYLGPHTEHLYQWSVQNLPRSSYKALTRTVDDLLQKRLVPAP-RMNPKRRKA 305
BLAST of mRNA_C-tenellus_contig1148.5.2 vs. uniprot
Match: A0A8J4APU4_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4APU4_9CHLO) HSP 1 Score: 211 bits (537), Expect = 4.020e-60 Identity = 106/271 (39.11%), Postives = 150/271 (55.35%), Query Frame = 3 Query: 351 NPSTKKRNVMGKRERVLASIPSKTIGSLHHPFPTEYGDHFETPMQAYQDVAGILSILAKRLGRRRKTLRIWDPYYCAGRTPRLLGELGFPLVSHQNEDFYAVVKDGRQPLHDVLVTNPPYSGDHKRRCLEYCAGSGKPWLLLIPNYVATKDYYREATVGKGPGGGGEPFYLVPRTRYVFDHPEGTGNADSPFVGVWFVHAGSYTDDLFSTAVA-------------------GSNRAFDIVRSVQELGRRGIVNSQKRLNPRQRRAAKKRK 1106 N S KKR + + E +K G PF +Y DHFE+P+QA QD+ +L +L+ +L + + +L ++DPY+C G + +LGF H+N DFY V G P +D+LVTNPPYS DHK R LE+C SGKPW LL+PNYVATK Y+ E PF+L P+ RY ++HPEGTG+A+SPF +W++ G YT+ ++ A G + R+V L + V + +RLNP+QR K +K Sbjct: 79 NVSHKKRKTVSEDE-TGGRTKAKCAGKGLWPFRVDYNDHFESPLQAVQDIEPVLQLLSIKLKKSKSSLTVYDPYFCQGGIRQHYEQLGFKNFIHRNRDFYKDVDSGNVPSYDILVTNPPYSSDHKERILEFCLRSGKPWALLLPNYVATKAYFSELLDSVSTPAAQRPFFLTPQARYSYEHPEGTGHAESPFFSIWYIGLGEYTETIYKACKARLEPQSNGSSIQSEAAAGLGGRWRVSVARTVDALKQAKAVPTARRLNPKQRARMKHQK 348
BLAST of mRNA_C-tenellus_contig1148.5.2 vs. uniprot
Match: A0A835SR82_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835SR82_9CHLO) HSP 1 Score: 204 bits (519), Expect = 1.410e-57 Identity = 107/257 (41.63%), Postives = 141/257 (54.86%), Query Frame = 3 Query: 417 KTIGSLHHPFPTEYGDHFETPMQAYQDVAGILSILAKRLGRRRKTLRIWDPYYCAGRTPRLLGELGFPLVSHQNEDFYAVVKDGRQPLHDVLVTNPPYSGDHKRRCLEYCAGSGKPWLLLIPNYVATKDYYREATVGKGPGGGGEPFYLVPRTRYVFDHPEGTGNADSPFVGVWFVHAGSYTDDLF-----------STAVAGSNR--------------AFDIVRSVQELGRRGIVNSQKRLNPRQRRAAKKRKAG 1112 K + S PF +Y DHFET A D+ +L+ L KRL + L I+DP++C G R GF H+ DFYA V +G+ P +D++VTNPPYS DHK R L++C SGKPW LL+PNYVATK YY E G PFYL P TRY ++HPEGTG+A+SPF +W+V G +T+ ++ S A A ++ A + RSV L V + KRLNP+QR KK+ G Sbjct: 88 KRVSSDDWPFEVDYNDHFETSSAAVDDIQPVLTALCKRLKKTPAQLAIYDPFFCKGGIRRHYEARGFTNFIHRKRDFYADVANGQLPAYDIMVTNPPYSADHKERILDFCLRSGKPWALLLPNYVATKAYYAELIEAAGTPPQQRPFYLTPITRYAYEHPEGTGHAESPFYSIWYVGLGQHTEAVYGACRTRLDLSTSGAAAAASXXXXXXXXXXXXXGWAVTLARSVDALREAKAVPTAKRLNPKQRARLKKKMGG 344
BLAST of mRNA_C-tenellus_contig1148.5.2 vs. uniprot
Match: A0A4D9CYX8_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CYX8_9STRA) HSP 1 Score: 203 bits (517), Expect = 7.470e-57 Identity = 110/271 (40.59%), Postives = 154/271 (56.83%), Query Frame = 3 Query: 315 ITQPGPSSLHPQNPSTKKRNVMGKRERVLASI-PSKTIGSL-HHPFPTEYGDHFETPMQAYQDVAGILSILAKRLGRRRKTLRIWDPYYCAGRTPRLLGELGFPLVSHQNEDFYAVVKDGRQPLHDVLVTNPPYSGDHKRRCLEYCAGSGKPWLLLIPNYVATKDYYREATVGKGPGGGGEPFYLVPRTRYVFDHPEGTGNADSPFVGVWFVHAGSYTDDLFSTAVAGSNRA-------FDIVRSVQELGRRGIVNSQKRLNPRQRRAAKK 1100 ++ P P SL + ++ R + A I P KT SL +PFPT+Y DHFE+P++AY+D+ L L + L R + +L I+DPYYC G LL LGFP V+++ DFYA V G P +DVLVTNPPYS +HK + L +C GS KPW LL+PNYVA K YY +A + +PFYLVP +Y + HPEGTG+ SPF +W + G V+ A + +V +V++L G S KR + ++R+ K+ Sbjct: 106 LSSPRPPSLFQPSEPSRNRKFKSTTSTLTARIQPKKTQASLPSYPFPTDYADHFESPLRAYEDLEPFLQWLRRALRRDKTSLHIYDPYYCQGAVVNLLKSLGFPRVTNKMRDFYADVAAGTVPSYDVLVTNPPYSDNHKEKILRFCLGSDKPWCLLLPNYVANKSYYLDAI--RPLPQDRQPFYLVPHAKYEYQHPEGTGHMSSPFFSIWVCNPGPIPRRDIGCVVSRLQAAQQQHSLPWRLVLTVEDLRSTGAAPSWKRPSNKRRKKMKR 374
BLAST of mRNA_C-tenellus_contig1148.5.2 vs. uniprot
Match: A0A835SNK2_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835SNK2_CHLIN) HSP 1 Score: 204 bits (519), Expect = 7.640e-57 Identity = 108/269 (40.15%), Postives = 144/269 (53.53%), Query Frame = 3 Query: 381 GKRERVLASIPSKTIGSLHHPFPTEYGDHFETPMQAYQDVAGILSILAKRLGRRRKTLRIWDPYYCAGRTPRLLGELGFPLVSHQNEDFYAVVKDGRQPLHDVLVTNPPYSGDHKRRCLEYCAGSGKPWLLLIPNYVATKDYYREATVGKGPGGGGEPFYLVPRTRYVFDHPEGTGNADSPFVGVWFVHAGSYTDDLFSTA------------------------VAGSNRAFDIVRSVQELGRRGIVNSQKRLNPRQRRAAKKRKAGS 1115 GK+E+ K + S PF +Y DHFET A D+ +L L KRL + L ++DP++C G R GF H+ DFYA V+ G+ P +D++VTNPPYS DHK R L++C SGKPW LL+PNYVATK YY E G PFYL P TRY ++HPEGTG+A+SPF +W+V G++T+ ++ + A + RSV L V + KRLNP+QR KK+ AGS Sbjct: 145 GKKEQKQG----KRVSSDEWPFEVDYNDHFETSAAAVDDIQPVLLALCKRLKKTPAQLAVYDPFFCQGGIRRHYTARGFTNFIHRKRDFYADVESGQLPEYDIMVTNPPYSADHKERILDFCLRSGKPWALLLPNYVATKAYYSELVDEAGTPPQQRPFYLTPVTRYAYEHPEGTGHAESPFYSIWYVGLGAHTEAVYGACRTKLDSPGPAAAXXXXXXXXXXXXXXXXSWAVTLARSVDALREAKAVPTAKRLNPKQRARLKKKMAGS 409
BLAST of mRNA_C-tenellus_contig1148.5.2 vs. uniprot
Match: L1IVN4_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IVN4_GUITC) HSP 1 Score: 204 bits (519), Expect = 8.030e-57 Identity = 111/259 (42.86%), Postives = 158/259 (61.00%), Query Frame = 3 Query: 342 HP-QNPSTKKRNVMGKRERVLASIPSKTIGSLHHPFPTEYGDHFETPMQAYQDVAGILSILAKRLGRRRKTLRIWDPYYCAGRTPRLLGELGFPLVSHQNEDFYAVVKDGRQPLH-DVLVTNPPYSGDHKRRCLEYCAGSGKPWLLLIPNYVATKDYYREATVGKGPGGGGEPFYLVPRTRYVFDHPEGTGNADSPFVGVWFVHAGSYTDDLFSTAVA--GSNRAFDIVRSVQELGRRGIVNSQKRLNPRQRRAAKKRK 1106 HP Q ++KKR+ G + + P+ +I + HPFPTEYGDHFET A D+A IL AK G++ +L I+DPYYC G + GF V + N D Y V K D++VTNPP+SGDHK++CLE+C + W++L+P Y ATK+Y++E G + FY +P+ RY F+HPEGTG+A SPF +WFV+ G +T+++FS G + R+V++L V+++KRLNPRQR A KK+K Sbjct: 157 HPDQGNNSKKRHERGPK----GTEPTSSIHN--HPFPTEYGDHFETSKVAIHDIAPILQQFAKVSGKQASSLAIYDPYYCDGAVIEHFRQEGFHNVHNLNVDCYQVWKSATTSSDFDIVVTNPPFSGDHKQKCLEHCVKREQAWMVLLPAYCATKNYFQELMSNWKERG--KVFYGIPKVRYDFEHPEGTGHAVSPFFSIWFVYLGKHTEEIFSWYKKRYGDEGPLKLARTVEDLAANKAVDNRKRLNPRQRAALKKKK 407
BLAST of mRNA_C-tenellus_contig1148.5.2 vs. uniprot
Match: A0A2J8ADG8_9CHLO (Uncharacterized protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8ADG8_9CHLO) HSP 1 Score: 199 bits (505), Expect = 2.840e-55 Identity = 103/248 (41.53%), Postives = 139/248 (56.05%), Query Frame = 3 Query: 432 LHHPFPTEYGDHFETPMQAYQDVAGILSILAKRLGRRRKTLRIWDPYYCAGRTPRLLGELGFPLVSHQNEDFYAVVKDGRQPLHDVLVTNPPYSGDHKRRCLEYCAGSGKPWLLLIPNYVATKDYYREATVGKGPGGGGEPFYLVPRTRYVFDHPEGTGNADSPFVGVWFVHAGSYTDDLFST------AVAGSNRAFD------------------IVRSVQELGRRGIVNSQKRLNPRQRRAAKKR 1103 L PF +Y DHFET +A QD+ +L L+KRL + L ++DP+YCAG LG H+N DFY VK G P +D+LVTNPPYSGDHK R LE+C SGKPW LL+PNYVATK Y+ + PF+L P RY +DHPEGTG+ +SPF +W+V G++T+ ++ + A + A D + RSV L + V + KRLNP+QR+ K++ Sbjct: 116 LSWPFAADYNDHFETDFRAVQDILPVLQQLSKRLCKPLSELAVYDPFYCAGGVRAHYAALGITKFIHRNRDFYDDVKKGALPSYDILVTNPPYSGDHKERILEFCLRSGKPWCLLMPNYVATKAYFGQLQDAASTPPLQRPFFLTPHARYSYDHPEGTGHTESPFFSIWYVCLGAHTEGVYGSCRSRLDAAPAAGGAADQRQGGAPAGXXXAAWGVALARSVDALRQAKAVPTGKRLNPQQRKRLKQK 363
BLAST of mRNA_C-tenellus_contig1148.5.2 vs. uniprot
Match: A0A835Y0N0_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y0N0_9CHLO) HSP 1 Score: 202 bits (515), Expect = 4.560e-55 Identity = 104/265 (39.25%), Postives = 142/265 (53.58%), Query Frame = 3 Query: 417 KTIGSLHHPFPTEYGDHFETPMQAYQDVAGILSILAKRLGRRRKTLRIWDPYYCAGRTPRLLGELGFPLVSHQNEDFYAVVKDGRQPLHDVLVTNPPYSGDHKRRCLEYCAGSGKPWLLLIPNYVATKDYYREATVGKGPGGGGEPFYLVPRTRYVFDHPEGTGNADSPFVGVWFVHAGSYTDDLFSTAVAGSNR----------------------------------AFDIVRSVQELGRRGIVNSQKRLNPRQRRAAKKRKA 1109 + + + PF +Y DHFETP+QA +D+ +L+ L RLG+ L ++DP++C G R LG+ H+ DFYA V+ G P +DVLVTNPPYS DHK R LE+C SGKPW LL+PNYVATK Y+ E PF+L P TRY ++HPEGTG+A+SPF +W+V G +T+ +F A + D+ R V+ L G V + +R NPRQRR K++ A Sbjct: 258 RKVDTSFWPFEVDYNDHFETPIQAVRDLQPVLTALCGRLGKSPAQLAVYDPFFCQGGIRRHFEALGYTNFIHRKRDFYADVEAGNLPKYDVLVTNPPYSEDHKERILEFCLRSGKPWALLMPNYVATKAYFAELLDATSTPAPQRPFFLTPHTRYEYEHPEGTGHAESPFFSIWYVGLGPHTEPVFQACRARTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPWGVDLARGVEHLKAAGAVPTARRPNPRQRRKIKEQMA 522 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1148.5.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1148.5.2 >prot_C-tenellus_contig1148.5.2 ID=prot_C-tenellus_contig1148.5.2|Name=mRNA_C-tenellus_contig1148.5.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=370bp MESKSPKGKKRKRAKGKGQDYSDDISSQRGTLDKLKVGGEGDDWGNYKDEback to top mRNA from alignment at C-tenellus_contig1148:4856..6659+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig1148.5.2 ID=mRNA_C-tenellus_contig1148.5.2|Name=mRNA_C-tenellus_contig1148.5.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1804bp|location=Sequence derived from alignment at C-tenellus_contig1148:4856..6659+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig1148:4856..6659+ >mRNA_C-tenellus_contig1148.5.2 ID=mRNA_C-tenellus_contig1148.5.2|Name=mRNA_C-tenellus_contig1148.5.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=1110bp|location=Sequence derived from alignment at C-tenellus_contig1148:4856..6659+ (Choristocarpus tenellus KU2346)back to top |