mRNA_C-tenellus_contig1147.1.3 (mRNA) Choristocarpus tenellus KU2346
|
Overview
Homology
BLAST of mRNA_C-tenellus_contig1147.1.3 vs. uniprot
Match: D7G5T0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5T0_ECTSI) HSP 1 Score: 618 bits (1593), Expect = 3.700e-209 Identity = 346/734 (47.14%), Postives = 446/734 (60.76%), Query Frame = 1
Query: 1 ISQDPGCLKMGPWTVKVFDVIARASSRIIITSTNMLFLTMCHGTWNRLSEVEMLRPFLYN*RSDNLWLHAIGGQMVGIWTFAHVWSLFLPSMFSGYSNRIHGGPFAFPFQASITLENKGNVNVSGMVANWGYDDVWRICWMTLMFCVLFPLSRSAWALRANFSLAMWLHMLLGAGYFIDNVRRRTHPHVWILNTPFVVWYIIDRVWCATSYRLTQKA--TCITLDENYMLMLWKQTTIPKRICDIYWLRSDSRSKQHRRWGEMPHPFTTCSSHMPTTIEGAQPSPDTHTTYADGELPPKKLETQG----KMPIELPITTDVSWPGHRFSLTSAFCERRRAHKLCKQRSRRLGSGTSFSGQN---------------LKGLGLKS----------LEDFIEEQE--EP-EDTMIGADAFGDTNEIKFMVGTPRADTKPFSQNTRNVCVENLLVLYVVDIDYSHSFLGNQS------VFSTDGVDI---DLKRLVRT-STRTFFNQREIELKNSRLERQPSLDGSWDIMAIVRIQRRKDVEFRCCTCLGRTHQYRGFRQPETAKIPDEEVLLLNKSSAEVSVSTYGPYRSEYGRLTEFPNLPPLLVIGTGAGAGLVLDFIAFVKANGLVPNHPVTICYSAASLPLLQFVTNTLLAERNPYFTIRTAFTQHEDIQFCDTRNPNNAGQLVMGRLNIEEIIKDAESSTELYFCGAGGINRFLRDQCAVRCMRYTGSAVQ 2070
+ DPGCLK GPW+ K FDVIAR S+R II++TN++F+TMCHGTWN LSEV++LRPFLY R+DN WLH+IGG +GIWT HV+SL LPS+F G+ N GGP P Q S+ + N V++ +ANWGYDD+WRI WMTL+FCVL PLSRSAWAL+ NF+LAMWLH+ +G GYF DN RRRTHPHVWILNTP +WYI D+VWC T R+ +A T I+LDE+YML+LW + PKRICDI+WL+ EM HPFTTCSSH + P K+ G K IE+P T V W GHRF L S+ R A ++ R SG SF Q ++ L S ++ F EE E EP E TMIG DA D +E+ MVG KP + ++ + V ++ ++ G +S V G D+ + + ++R ST+ F R+ E + RLE + GSW MAIV++ RR +C +C+G T FR PET+ I D E N A + + TYGPYRSEYGRL EFP+LPPLL++ TGAGA LVLDFI +V+AN +VP PV++CYS+ASL LLQFVTNTLLAER+P I+TA T+HED++ D+ N +LVMGRL+I++II + TE+YFCG GGIN LR+ C R ++Y GS+VQ
Sbjct: 159 MDDDPGCLKDGPWSAKTFDVIARISARFIISTTNLMFITMCHGTWNYLSEVQVLRPFLYAWRTDNFWLHSIGGWTMGIWTMLHVYSLLLPSIFHGFKNVAVGGPVELPLQVSLAVSN---VDLDNKLANWGYDDIWRIIWMTLIFCVLTPLSRSAWALKKNFTLAMWLHIGVGVGYFFDNWRRRTHPHVWILNTPVFLWYIADKVWCCTRGRVDDRAETTRISLDEDYMLLLWHEEH-PKRICDIFWLKHRDSDGT-----EMAHPFTTCSSH---------------------DTPNKQATASGTAAVKTTIEVPTDTSVHWKGHRFLLASSSGRRSNATDPNRRSVRSFFSGKSFGAQGSFGRVSSFRFGQSNPMREARLASSHTGSSQDVDVDSFFEEDEKDEPGETTMIGVDANPDIDEVSIMVG----GLKPKGSRSYSLPRLGTISGGVPEVSTTNDGSGVKSARPDKPVKKETGSDVGGPNRREVIRRLSTKNFIEYRKAEAEEGRLETVEA--GSWSKMAIVKVNRRTSKASKC-SCMGLTFILSIFRDPETSSIADLEAAQRN---APLQLRTYGPYRSEYGRLAEFPHLPPLLIVATGAGAALVLDFIGYVRANNIVPLRPVSVCYSSASLALLQFVTNTLLAERSPGIHIQTALTRHEDLEIVDSANGPEP-ELVMGRLDIKKIIGEVSQETEVYFCGGGGINALLRETCTRRGIKYVGSSVQ 851
BLAST of mRNA_C-tenellus_contig1147.1.3 vs. uniprot
Match: D8LCP9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP9_ECTSI) HSP 1 Score: 560 bits (1444), Expect = 7.510e-190 Identity = 316/708 (44.63%), Postives = 415/708 (58.62%), Query Frame = 1
Query: 1 ISQDPGCLKMGPWTVKVFDVIARASSRIIITSTNMLFLTMCHGTWNRLSEVEMLRPFLYN*RSDNLWLHAIGGQMVGIWTFAHVWSLFLPSMFSGYSNRIHGGPFAFPFQASITLENKGNVNVSGMVANWGYDDVWRICWMTLMFCVLFPLSRSAWALRANFSLAMWLHMLLGAGYFIDNVRRRTHPHVWILNTPFVVWYIIDRVWCATSYRLTQKATCITLDENYMLMLWKQTTIPKRICDIYWLRSDSRSKQHRRWGEMPHPFTTCSSHMPTTIEGAQPSPDTHTTYADGELPPKKLETQGKMPIELPITTDVSWPGHRFSLTSAFCERRRAHKLCKQRSRRLGSGTSFSGQNL--------KGLGLKSLEDFIEEQEEPEDTMIGADAFGDTNEIKFMVGTPRADTKPFSQNTRNVCVENLLVLYVVDIDYSHSFLG------NQSVFSTDGVDI---DLKRLV-RTSTRTFFNQREIELKNSRLERQPSLDGSWDIMAIVRIQRRKDVEFRCCTCLGRTHQYRGFRQPETAKIPDEEVLLLNKSSAEVSVSTYGPYRSEYGRLTEFPNLPPLLVIGTGAGAGLVLDFIAFVKANGLVPNHPVTICYSAASLPLLQFVTNTLLAERNPYFTIRTAFTQHEDIQFCDTRNPNNAGQLVMGRLNIEEIIKDAESSTELYFCGAGGINRFLRDQCAVRCMRYTGSAVQ 2070
+ DPGCLK GPW+ K FD IARAS+R II++TN++F+TMCHGTWN LSEV++LRPFLY R+DN WLH+IGG +GIWT HV+SL LPS+F G+ N GGP PFQ S+ + N V+V +ANWGYDD+WRI WMTL+FCVL PLSRSAWAL+ NF+LAMWLHM +G GYF DN RRRTHPHVWILNTP +WYI D+VWC+T SD EM HPFTTCSSH +P+ T +D T IE+P T V W GHRF L S + + + FSG++L K + + S+ D E++E E TMIG D D +E+ +VG KP + + ++ + + ++ ++ G ++ V G D+ + K ++ R +T F R+ + + +L + GSW MAIV++ RR + + C+C+G T R FR PET+ I D E N + + TYGPYRSEYGRL EFP+LPPLL++ TGAGA LVLDFI +V+AN +VP PV++ YS+ASL LLQFVTNTLLAER+P I+TA T+HED+Q D + +LVMGRL+I+ II + TE+YFCG GGIN LR+ CA R ++Y GS+VQ
Sbjct: 1 MDDDPGCLKAGPWSAKAFDAIARASARFIISTTNLMFITMCHGTWNFLSEVQVLRPFLYAWRTDNFWLHSIGGWTMGIWTMLHVYSLLLPSLFHGFKNVAVGGPVELPFQVSLAVSN---VDVDNKLANWGYDDIWRIFWMTLIFCVLIPLSRSAWALKKNFTLAMWLHMGVGIGYFFDNWRRRTHPHVWILNTPVFLWYIADKVWCSTR------------------------------------GSDGT--------EMAHPFTTCSSHD---------TPNKPATLSD--------TTAVNTMIEVPTDTSVHWKGHRFLLASG------GQRSVTTDPKHRNVPSFFSGRSLGTHGSSGSKDIDVDSIFDDDEKEEPEETTMIGVDVRPDIDEVSVIVG----GLKPTASRSLSLPLPGTIYGPETEVGTTNDGNGFNPARPDKLVREKTGADVGGANRKAVIKRLNTTAFKEYRKADAEKGQLATIQA--GSWSKMAIVKVNRRTS-KAKKCSCMGLTFILRIFRDPETSSIADLEAAQRNPT---FELRTYGPYRSEYGRLVEFPHLPPLLIVATGAGAALVLDFIGYVRANNIVPLRPVSVYYSSASLALLQFVTNTLLAERSPGIHIQTALTRHEDLQIVDEASGPEP-ELVMGRLDIKNIIGEVSQETEVYFCGGGGINALLRETCARRGIKYVGSSVQ 627
BLAST of mRNA_C-tenellus_contig1147.1.3 vs. uniprot
Match: D7G5S8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5S8_ECTSI) HSP 1 Score: 256 bits (654), Expect = 5.640e-75 Identity = 132/245 (53.88%), Postives = 161/245 (65.71%), Query Frame = 1
Query: 358 NVNVSGMVANWGYDDVWRICWMTLMFCVLFPLSRSAWALRANFSLAMWLHMLLGAGYFIDNVRRRTHPHVWILNTPFVVWYIIDRVWCATSYRLTQKA--TCITLDENYMLMLWKQTTIPKRICDIYWLR-SDSRSKQHRRWGEMPHPFTTCSSHMPTTIEGAQPSPDTHTTYADGELPPKKLETQGKMPIELPITTDVSWPGHRFSLTSAFCERRRAHKLCKQRSRRLGSGTSFSGQNLKGLGL 1083
NV+V +ANWGYDDVWR+ WMTL+FCVL PLSRS WAL+ NFSLAMWLH+ +G GYF DN RRRTHPHVWILNTP V+WYI D++WC T R+ +A T I LDE+YML+LW + PK ICDI+WL+ SD SK RR GE+ HPFTTCSSH DT + E + + G+ IE+P+ TDV+W GHRF LTS +R A + RS R GTS +KG G+
Sbjct: 54 NVDVQNKLANWGYDDVWRLIWMTLIFCVLTPLSRSVWALKKNFSLAMWLHIGVGMGYFFDNWRRRTHPHVWILNTPVVLWYIADKIWCCTEGRVNHRAETTRIKLDEDYMLLLWNEDQ-PKSICDIFWLKHSDRDSKGSRRTGEVAHPFTTCSSH------------DTAVGHTSPEAGISTVGSPGRPNIEVPLETDVNWKGHRFLLTSGISQRSNALESTL-RSSRAFYGTSDLSVAIKGDGV 284
BLAST of mRNA_C-tenellus_contig1147.1.3 vs. uniprot
Match: D7G5S9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5S9_ECTSI) HSP 1 Score: 228 bits (580), Expect = 7.870e-67 Identity = 118/210 (56.19%), Postives = 143/210 (68.10%), Query Frame = 1
Query: 1447 MAIVRIQRRKDVEFRC-CTCLGRTHQYRGFRQPETAKIPD-EEVLLLNKSSAEVSVSTYGPYRSEYGRLTEFPNLPPLLVIGTGAGAGLVLDFIAFVKANGLVPNHPVTICYSAASLPLLQFVTNTLLAERNPYFTIRTAFTQHEDIQFCDTRNPNNAGQLVMGRLNIEEIIKDAESSTELYFCGAGGINRFLRDQCAVRCMRYTGSAVQ 2070
MAIVR+ RR C CTC+G T FR PETA I D EE L + + YGPYRSEYGRL EFPNLPPLL+I TGAGAGLVLDF+ FV+A + P PV +CYS+ASL LLQFVTNTLLAER P + TA T+HE+++ +T N +LV+GRL+++ II+ TE+YFCG GGIN LR+ CA R M+Y GSAVQ
Sbjct: 1 MAIVRLNRRTSQSSPCACTCIGLTWVLNIFRTPETASIADVEETNDLET----IPLRVYGPYRSEYGRLEEFPNLPPLLIIATGAGAGLVLDFVGFVRAKKITPKRPVKVCYSSASLALLQFVTNTLLAERTPGIQVETALTRHEELEMFNTTNQPKP-ELVIGRLDVKSIIRGVSEDTEVYFCGGGGINTLLREACAKRGMKYVGSAVQ 205
BLAST of mRNA_C-tenellus_contig1147.1.3 vs. uniprot
Match: A0A448YYA3_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YYA3_9STRA) HSP 1 Score: 141 bits (356), Expect = 2.710e-31 Identity = 98/289 (33.91%), Postives = 136/289 (47.06%), Query Frame = 1
Query: 25 KMGPWTVKVFDVIARASSRIIITSTNMLFLT---------MCHGTWNRLSEVEMLRPFLYN*RSDNLWLHAIGGQMVGIWTFAHVWSLFLPSMFSGYSNRIHGGPFAFPFQASITLENKGNVNVSGMVANWGYDDVWRICWMTLMFCVLFPLSRSAWALRANFSLAMWLHMLLGAGYFIDNVRRRTHPHVWILNTPFVVWYIIDRVWCATSYRLTQKATCIT-LDENYMLMLWKQTTIPKRICDI----------YWLRSDSRSKQHRRWGEMPHPFTTCSSHMPTTIE 831
K GPW+V +DVIAR S R I + N+L +T +C NR+ + N NL LH G + + TF HVWS+ P +F GY+ ++ G F +P K V+ + DDVWR+ MT+MFC+L PLS ++ R + + M LH L+ YF+D VRR THPH W+LNTP ++ D+ W S R T L ENYM++ WK D Y+LR D S + E H FT + T+I+
Sbjct: 82 KPGPWSVVAYDVIARISGRFSICAYNLLLITRLRCLEHCILCSKWVNRMIDCS-------NIIKANLRLHKWNGIALCVLTFIHVWSILFPCVFHGYTAKVIRGTFEWPLSERPPPGFKDADAVNKQMGL-EIDDVWRMVEMTVMFCILLPLSVRWFSTRWH--IGMPLHRLINVLYFVDIVRRHTHPHSWVLNTPIFCAWVFDKFWMWYSNRRKGPEVHRTYLGENYMVLYWKHCETKLGSYDALDTHPILSPDYFLRLDDSS-----FFESAHVFTCFENRTNTSID 355
BLAST of mRNA_C-tenellus_contig1147.1.3 vs. uniprot
Match: A0A7S1AZW1_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AZW1_NOCSC) HSP 1 Score: 135 bits (339), Expect = 2.100e-29 Identity = 86/257 (33.46%), Postives = 122/257 (47.47%), Query Frame = 1
Query: 4 SQDPGCLKMGPWTVKVFDVIARASSRIIITSTNMLFLTMCHGTWNRLSEVEMLR----PFLYN*RSDNLWLHAIGGQMVGIWTFAHVWSLFLPSMFSGYSNRIHGGPFAFPFQASITLENKGNVNVSGMVANWGYDDVWRICWMTLMFCVLFPLSRSAWALRANFSLAMWLHMLLGAGYFIDNVRRRTHPHVWILNTP-FVVWYI---IDRVWCATSYRLTQKATCITLDENYMLMLWKQTTIPKRICDIYWLRSDS 750
S D LK+GPWTV ++DV+AR S R + TS N+L TM H T L E R F WLH + G + G HV+S+ P GYS + G A P + +E +V+ G + DDVWR+ MTL F +LFP S LR N+ + + LH + YFID RR +HPH W+LN P F +W + W Y ++ + +++ +W T ++ LRS+S
Sbjct: 148 SSDRVPLKLGPWTVPLYDVVARISGRFLTTSLNILMWTMMHTTHRVLQESWFARCGLVDFAQESDESRRWLHNVNGYLSGFLVLFHVYSILFPVFLHGYSAYVTPGSLALPL-SERRIEGT-DVDNEGKLMGLQGDDVWRLIEMTLFFVILFPWSLRL--LRCNYRVGIQLHRWVFILYFIDIARRHSHPHNWVLNVPVFFLWVADVAVGNWWRVHKYAARRQR----VSSEHVVCMWSSDTSLDTSGPLFLLRSNS 396
BLAST of mRNA_C-tenellus_contig1147.1.3 vs. uniprot
Match: A0A6H5JCC2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCC2_9PHAE) HSP 1 Score: 122 bits (306), Expect = 3.970e-28 Identity = 86/234 (36.75%), Postives = 110/234 (47.01%), Query Frame = 1
Query: 1504 LGRTHQYRGFRQPETAKIPDEEVLLLNKSSAEVSVSTYGPYRSEYGRLTEFPNLPPLL-----VIGTGAGAGLVLDFIAFVKANGLVPNHPVTICYSAASLPLLQFVTNTLLAERNPYFTIRTAFTQHEDIQFC-DTRNPNNAGQLVMGRLNIEE---------------------------------------IIKDAESSTELYFCGAGGINRFLRDQCAVRCMRYTGSAVQ 2070
+G T FR P T+ IP+ E N + + T+GPYRSEYGRL EFP+LPPLL I G G + +S+ASL LLQFVTNTLLAER+P I+TA T+HED+Q DT P +LVMG L+I+ II + TE+YFCG GG+N L + CA R ++Y G +VQ
Sbjct: 1 MGLTFILSIFRDPVTSSIPELEAAQRNPT---FQLRTFGPYRSEYGRLVEFPHLPPLLGQQHCAIAAGFG-----------------------VYHSSASLALLQFVTNTLLAERSPGIHIQTALTRHEDVQIVGDTSGPEP--ELVMGHLDIKHDTTDSNSLFAGYVRRYDKFVNPRWRALPLVFACLVLPQTIIGEVSQETEVYFCGGGGVNAPLCETCARRGIKYVGRSVQ 206
BLAST of mRNA_C-tenellus_contig1147.1.3 vs. uniprot
Match: A0A6U9ZH54_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6U9ZH54_9STRA) HSP 1 Score: 130 bits (328), Expect = 4.160e-28 Identity = 81/227 (35.68%), Postives = 117/227 (51.54%), Query Frame = 1
Query: 25 KMGPWTVKVFDVIARASSRIIITSTNMLFLTMCHGTWNRLSEVEMLRPFL--YN*RSDNLWLHAIGGQMVGIWTFAHVWSLFLPSMFSGYSNRIHGGPFAFPFQASITLENKGNVNVSGMVANWGYDDVWRICWMTLMFCVLFPLSRSAWALRANFSLAMWLHMLLGAGYFIDNVRRRTHPHVWILNTPFVVWYIIDRVWCATSYR-LTQKATCITLDENYMLMLWK 696
K GPW+V +DVIAR S R I + N+L +T + L + + L N NL LH ++ I TF HVWS+ LP + Y +++ G F +P K + + + DDVWR+ MTL+ CV PLS W L ++ + M LH L+ YF+D VRR THPH W+LNTP ++ D+ W S R + + + L ENY+++ WK
Sbjct: 126 KSGPWSVVAYDVIARISGRFSICAFNLLLVTRLRCLEHILLCSKWINKVLDCTNIIKVNLRLHKWNAIVLCILTFVHVWSILLPCITHNYKAKVNPGYFEWPLSERKPPGFK-DADPLTKTMSLQIDDVWRLVEMTLLMCVFVPLS-VRW-LSTHYHIGMPLHRLITVLYFVDIVRRHTHPHSWVLNTPIFCAWVFDKFWFWYSNRHQSPEVHRVFLGENYIVLYWK 349
BLAST of mRNA_C-tenellus_contig1147.1.3 vs. uniprot
Match: A0A2V3IFJ1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFJ1_9FLOR) HSP 1 Score: 130 bits (326), Expect = 5.950e-28 Identity = 87/246 (35.37%), Postives = 124/246 (50.41%), Query Frame = 1
Query: 22 LKMGPWTVKVFDVIARASSRIIITSTNMLFLTMCHGTWNRLSEVEMLRPFLYN*RS--DNLWLHAIGGQMVGIWTFAHVWSLFLPSMFSGYSNRIHGGPFAFPFQASITLEN--KGNVNVSGMVANWGY--DDVWRICWMTLMFCVLFPLSRSAWALRANFSLAMWLHMLLGAGYFIDNVRRRTHPHVWILNTPFVVWYIIDRVWCATSYRLTQKATCITLDENYMLMLWKQTTIPKRICDIYWLR 741
LK GPW VK +D +AR S R I + N+L TM + N ++E + R + S N LH G + +WT HVWS+ P + G++ + G F + I E KG +++ G DDV+RI MT++ +L PLS W L + L + LH ++ YFID VRR THPH WILNTPF V +I+D V + R L E+YML+ + + + Y+LR
Sbjct: 86 LKPGPWAVKFYDAVARISGRYSIVALNLLLFTMMKTSMNFVAESWIARHVVDFTDSVEGNRRLHKWNGIAIAVWTLLHVWSILFPCIVHGWNAEVILGSFEW-----ILSERGPKGFKDINNETKTMGLQGDDVFRIVEMTILLAILLPLS-VRW-LHTRWHLGIHLHNIINVLYFIDIVRRHTHPHSWILNTPFFVAWIVDSVIGSYWRRSKPLMHRQHLSEDYMLLFSDERKTLETVGPKYYLR 324
BLAST of mRNA_C-tenellus_contig1147.1.3 vs. uniprot
Match: A0A6U5HDT5_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5HDT5_9STRA) HSP 1 Score: 111 bits (277), Expect = 6.900e-22 Identity = 77/268 (28.73%), Postives = 123/268 (45.90%), Query Frame = 1
Query: 25 KMGPWTVKVFDVIARASSRIIITSTNMLFLTMCHGTWNRLSEVEMLRPFLYN*RSDNLWLHAIGGQMVGIWTFAHVWSLFLPSMFSGYSNRIHGGPFAFPFQASITLENKGN----VNVSGMVANWGYDDVWRICWMTLMFCVLFPLSRSAWALRANFSLAMWLHMLLGAGYFIDNVRRRTHPHVWILNTPFVVWYIIDRVWCATSYRLTQ-KATCITLDENYMLMLWKQ--TTIPKR--ICDIYWLRSDSRSKQHRRWGEMPHPFTT 801
K GPWTV+ +D+ AR S R + + N LF TM ++ +SE + R ++ + L +H G + + T HVWS+ P S Y +I G F FP E K N V+ + + DD++R+ ++++ L + S + N+ L + +H + YF+D VRR THPH W+LN P +++D + T K + + NY+ + WK K+ I DI + E HPFT+
Sbjct: 51 KDGPWTVRTYDIFARVSGRFTMIALNALFFTMMKTSYQYISE-NLDRYIDFSDDTAPLRIHKWIGISLCVVTIIHVWSILFPVFISNYGFKIVPGSFTFPLS-----EKKPNGFKDVDAAKKMVMMQIDDLYRLIMISILLGPL--IFYSVKKISTNYRLGIRIHQFVMLMYFVDIVRRHTHPHSWVLNVPVFFLWVLDYCYGVYFRGATMVKIETVEIGSNYIAIFWKNPCAVFQKKSGIGDIIHILPSYGKNFIDDTAERKHPFTS 310 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1147.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1147.1.3 >prot_C-tenellus_contig1147.1.3 ID=prot_C-tenellus_contig1147.1.3|Name=mRNA_C-tenellus_contig1147.1.3|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=617bp MVGIWTFAHVWSLFLPSMFSGYSNRIHGGPFAFPFQASITLENKGNVNVSback to top mRNA from alignment at C-tenellus_contig1147:3752..14278- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig1147.1.3 ID=mRNA_C-tenellus_contig1147.1.3|Name=mRNA_C-tenellus_contig1147.1.3|organism=Choristocarpus tenellus KU2346|type=mRNA|length=10527bp|location=Sequence derived from alignment at C-tenellus_contig1147:3752..14278- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig1147:3752..14278- >mRNA_C-tenellus_contig1147.1.3 ID=mRNA_C-tenellus_contig1147.1.3|Name=mRNA_C-tenellus_contig1147.1.3|organism=Choristocarpus tenellus KU2346|type=CDS|length=1851bp|location=Sequence derived from alignment at C-tenellus_contig1147:3752..14278- (Choristocarpus tenellus KU2346)back to top |