mRNA_C-tenellus_contig11443.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig11443.1.1
Unique NamemRNA_C-tenellus_contig11443.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig11443.1.1 vs. uniprot
Match: A0A6H5JRN5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRN5_9PHAE)

HSP 1 Score: 209 bits (531), Expect = 3.120e-60
Identity = 105/134 (78.36%), Postives = 120/134 (89.55%), Query Frame = 1
Query:    1 IKKQARQEKNLEAYLMRELAVLKHYQHDNLLQYIGASNVMARESGGV-YVFIVTELTCGGDLLALLLSEGEVGWKFRVSLLTDAARALEFLHSRSLIHRDIKSPNMLIDSDRRCKIADFGMARQLGANMTVVGT 399
            +KKQAR+E +LEAYLMRELAVLKH+QH+NLLQY+GASN  + E GG  +VFIVTEL CGGDLLALLLSE +VGWK RVS+L DAARAL+FLH +SLIHRDIKSPN+L+DS  RCK+ADFGMARQLGANMTVVGT
Sbjct:   67 VKKQARREADLEAYLMRELAVLKHFQHENLLQYVGASNAASAEPGGTGHVFIVTELACGGDLLALLLSEKQVGWKLRVSILMDAARALDFLHRKSLIHRDIKSPNILLDSRHRCKLADFGMARQLGANMTVVGT 200          
BLAST of mRNA_C-tenellus_contig11443.1.1 vs. uniprot
Match: A0A835ZKA0_9STRA (LISK family protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKA0_9STRA)

HSP 1 Score: 167 bits (423), Expect = 1.260e-45
Identity = 89/135 (65.93%), Postives = 105/135 (77.78%), Query Frame = 1
Query:    1 IKKQARQEKN-LEAYLMRELAVLKHYQHDNLLQYIGASNVMARE-SGGVYVFIVTELTCGGDLLALLLSEGEVGWKFRVSLLTDAARALEFLHSRSLIHRDIKSPNMLIDSDRRCKIADFGMARQLGANMTVVGT 399
            +KKQ R   + LE YL+RELAVLKH++H NLL Y+GAS+V      G   ++IVTEL   GDLLALLL    +GWK RVS+L DAARALEFLHS+SLIHRDIKSPNML+D +  CKIADFGMARQ+G NMT+VGT
Sbjct:   70 VKKQKRAVNDGLETYLLRELAVLKHFEHPNLLSYLGASDVPGEGIDGASAIYIVTELAEHGDLLALLLGNYSLGWKLRVSMLLDAARALEFLHSKSLIHRDIKSPNMLLDLNFNCKIADFGMARQIGTNMTIVGT 204          
BLAST of mRNA_C-tenellus_contig11443.1.1 vs. uniprot
Match: A0A836CNH5_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNH5_9STRA)

HSP 1 Score: 149 bits (377), Expect = 6.130e-43
Identity = 76/138 (55.07%), Postives = 100/138 (72.46%), Query Frame = 1
Query:    1 IKKQARQEKNLEAYLMRELAVLKHYQHDNLLQYIGASNVMARESGGVYVFIVTELTCGGDLLALLLSEGEVGWKFRVSLLTDAARALEFLHSRSLIHRDIKSPNMLIDSDRRCKIAD-----FGMARQLGANMTVVGT 399
            +KKQ R +  LE YL+RELAVLKH+QH+N+++Y+G + V  +  G  +V+IVTEL   GD+LALLL    +GW+ R S+L DA RALE+LH + LIHRDIKS N+L+D +  CK+A      FGMAR LG NMT+VGT
Sbjct:   44 VKKQKRADDELETYLLRELAVLKHFQHENMIRYVGGTQV-CQPDGTAHVYIVTELAEHGDVLALLLCGAAIGWRLRASILLDATRALEYLHGKRLIHRDIKSANLLLDRNFNCKLAGEFVSYFGMARPLGLNMTIVGT 180          
BLAST of mRNA_C-tenellus_contig11443.1.1 vs. uniprot
Match: D7G911_ECTSI (LISK family protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G911_ECTSI)

HSP 1 Score: 150 bits (378), Expect = 1.460e-39
Identity = 76/139 (54.68%), Postives = 106/139 (76.26%), Query Frame = 1
Query:    1 IKKQARQEKNLEAYLMRELAVLKHYQHDNLLQYIGASNVMARESGGVY-VFIVTELTCGGDLLALLL-SEGEVGWKFRVSLLTDAARALEFLHSRSLIHRDIKSPNMLIDSDRRCKIADFGMARQLGAN--MTVVGTGE 405
            +KKQ RQ ++LE YL+REL+VLK+ +H N+L+YIGA NV+A+  G ++ V+I+TE   GGDLL LLL +E  +GW+FR+ +  + A ALE+LHS+ LIHRDIKS N L+D D  CK++DFGMAR++ +N  MT+ GT E
Sbjct:   50 VKKQTRQGRDLEKYLLRELSVLKYIRHQNMLEYIGAYNVIAKSRGQLHAVYIITEYAQGGDLLKLLLRTETPLGWRFRIQIAKEGAEALEYLHSQQLIHRDIKSSNFLLDGDWHCKLSDFGMAREVSSNGKMTICGTDE 188          
BLAST of mRNA_C-tenellus_contig11443.1.1 vs. uniprot
Match: A0A835YUS4_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUS4_9STRA)

HSP 1 Score: 145 bits (366), Expect = 1.020e-37
Identity = 75/137 (54.74%), Postives = 103/137 (75.18%), Query Frame = 1
Query:    1 IKKQARQEKNLEAYLMRELAVLKHYQHDNLLQYIGASNVMARESGGVY-VFIVTELTCGGDLLALLL-SEGEVGWKFRVSLLTDAARALEFLHSRSLIHRDIKSPNMLIDSDRRCKIADFGMARQLGAN--MTVVGT 399
            +KKQ R+ K+LE YL+REL VLK  +H N+L+YIGA NV+A+  G ++ V+I+TE   GGDLL LLL  + E+GWKFR+ +  +   ALE+LHS+ LIHRDIKS N L+D+D RCK++DFGMAR++  +  MT+ GT
Sbjct:  128 VKKQTRKGKDLEKYLLRELQVLKFIRHPNMLEYIGAYNVIAKSRGQLHAVYIITEYAAGGDLLKLLLRKDQELGWKFRIRVAKEGLEALEYLHSQELIHRDIKSSNFLLDADWRCKLSDFGMAREVAKDGKMTICGT 264          
BLAST of mRNA_C-tenellus_contig11443.1.1 vs. uniprot
Match: A0A3R7XCZ5_9PROT (Non-specific serine/threonine protein kinase (Fragment) n=1 Tax=Alphaproteobacteria bacterium TMED89 TaxID=1986647 RepID=A0A3R7XCZ5_9PROT)

HSP 1 Score: 132 bits (331), Expect = 1.040e-36
Identity = 68/138 (49.28%), Postives = 95/138 (68.84%), Query Frame = 1
Query:    1 IKKQARQEKNLEAYLMRELAVLKHYQHDNLLQYIGASNVMARESGGVYVFIVTELTCGGDLLALLLSEGEVGWKFRVSLLTDAARALEFLHSRSLIHRDIKSPNMLIDSDRRCKIADFGMARQLGAN---MTVVGTGE 405
            +KKQ R+++ LE +L+RELAVLK  +H+N+L+Y+GA N +        V+IVTEL  GGDLL+LLLSE  +GWKF   +   AA  LE LHS +LIHRD+K+ N+L+D+   CK+ADFG+ R+   +   M+  GT E
Sbjct:    1 MKKQVREQEELETHLLRELAVLKCMKHENMLEYLGAYNEVDPAGATHAVYIVTELAAGGDLLSLLLSEHALGWKFLAKICRGAAAGLEHLHSHNLIHRDVKASNLLLDARWACKLADFGLCREAAPDDEQMSTCGTDE 138          
BLAST of mRNA_C-tenellus_contig11443.1.1 vs. uniprot
Match: A0A7S2WAU8_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WAU8_9STRA)

HSP 1 Score: 110 bits (274), Expect = 1.660e-25
Identity = 61/141 (43.26%), Postives = 84/141 (59.57%), Query Frame = 1
Query:    1 IKKQARQEKNLEAYLMRELAVLKHYQHDNLLQYIGASNVMARESGGVYVFIVTELTCGGDLLALLLSEGEVGWKFRVSLLTDAARALEFLHSRSLIHRDIKSPNMLIDSDRRCKIADFGMAR------QLGANMTVVGTGE 405
            IK+Q  Q+ +LE+Y+++ELA+L+   H  L+ YIGA  V +       ++I TE   GGDL   L +   +GWK RVS+  D A  L +LH RSLIHRDIK+ N+L+D +   K+ DFG AR        G  MT+ GT E
Sbjct:   53 IKEQKVQDAHLESYILKELAILRRCNHPKLVAYIGACKVKSD-----VIYIATEYCSGGDLRRFLQTNHIIGWKLRVSIAVDVAEGLAYLHDRSLIHRDIKTENVLLDPNFNAKLCDFGFARVAETKTDQGRPMTMCGTDE 188          
BLAST of mRNA_C-tenellus_contig11443.1.1 vs. uniprot
Match: A0A2R5G0L1_9STRA (RasGEF domain-containing serine/threonine-protein kinase X n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G0L1_9STRA)

HSP 1 Score: 105 bits (262), Expect = 1.070e-23
Identity = 60/142 (42.25%), Postives = 82/142 (57.75%), Query Frame = 1
Query:    1 IKKQARQEKNLEAYLMRELAVLKHYQHDNLLQYIGASNVMARESGGVYVFIVTELTCGGDLLALLLSEGEVGWKFRVSLLTDAARALEFLHSRSLIHRDIKSPNMLIDSDRRCKIADFGMARQL-------GANMTVVGTGE 405
            IKKQ   + +LE Y+ +ELA+L+   H  L++YIGA  V  +      ++I TE   GGDL  LL S   +GWK R ++L   A ALE++H R LIHRD+K+ N+L+D     K+ DFG AR         G  MT+ GT E
Sbjct:   53 IKKQKLADPDLERYIRKELAILRRCNHPGLVKYIGACKVDEKT-----IYIATEYCRGGDLRRLLQSSRALGWKLRANILRGVADALEYMHDRGLIHRDVKTENVLLDETLNPKLCDFGFARDAAPGTDARGRVMTMCGTDE 189          
BLAST of mRNA_C-tenellus_contig11443.1.1 vs. uniprot
Match: A0A067C1S8_SAPPC (TKL/LISK/LISK-DD1 protein kinase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C1S8_SAPPC)

HSP 1 Score: 99.8 bits (247), Expect = 8.620e-22
Identity = 54/123 (43.90%), Postives = 74/123 (60.16%), Query Frame = 1
Query:    1 IKKQARQEKNLEAYLMRELAVLKHYQHDNLLQYIGASNVMARESGGVYVFIVTELTCGGDLLALLLSEGEVGWKFRVSLLTDAARALEFLHSRSLIHRDIKSPNMLIDSDRRCKIADFGMARQ 369
            IK+Q R +  +  Y+ RE+A+L+  +H  LL+++G  N          V+IVTE   GGD+  LL     V W  RV +  DAA AL +LH    IHRDIK+ N+L+D DRRCK+ DFG AR+
Sbjct:   63 IKRQKR-DPQINDYIAREIAILRQLEHPRLLRFVGQVNQPDE------VWIVTEYLKGGDVSKLLKKAAPVTWYQRVQIALDAAEALAYLHDHGFIHRDIKAANLLLDDDRRCKLCDFGFARE 178          
BLAST of mRNA_C-tenellus_contig11443.1.1 vs. uniprot
Match: A0A1V9Z5G7_9STRA (Kinase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z5G7_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 4.470e-21
Identity = 49/112 (43.75%), Postives = 71/112 (63.39%), Query Frame = 1
Query:   34 EAYLMRELAVLKHYQHDNLLQYIGASNVMARESGGVYVFIVTELTCGGDLLALLLSEGEVGWKFRVSLLTDAARALEFLHSRSLIHRDIKSPNMLIDSDRRCKIADFGMARQ 369
            +A+++RELA+L+   H +LL+YIG+        G   ++IV+E   GGD+  LL  +  V W   V +  DAA AL++LH   +IHRDIKS N+L+D D RC + DFG AR+
Sbjct:   55 DAHILRELAILQQIDHPHLLKYIGSCEY--EHMGNKEIWIVSEFYKGGDVSKLLKKKKAVSWLQCVQIALDAAEALQYLHDHQIIHRDIKSANILLDGDLRCHLCDFGFARK 164          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11443.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRN5_9PHAE3.120e-6078.36Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZKA0_9STRA1.260e-4565.93LISK family protein kinase n=1 Tax=Tribonema minus... [more]
A0A836CNH5_9STRA6.130e-4355.07Kinase-like domain-containing protein (Fragment) n... [more]
D7G911_ECTSI1.460e-3954.68LISK family protein kinase n=1 Tax=Ectocarpus sili... [more]
A0A835YUS4_9STRA1.020e-3754.74Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A3R7XCZ5_9PROT1.040e-3649.28Non-specific serine/threonine protein kinase (Frag... [more]
A0A7S2WAU8_9STRA1.660e-2543.26Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A2R5G0L1_9STRA1.070e-2342.25RasGEF domain-containing serine/threonine-protein ... [more]
A0A067C1S8_SAPPC8.620e-2243.90TKL/LISK/LISK-DD1 protein kinase n=2 Tax=Saprolegn... [more]
A0A1V9Z5G7_9STRA4.470e-2143.75Kinase n=1 Tax=Thraustotheca clavata TaxID=74557 R... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig11443contigC-tenellus_contig11443:316..1272 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7G911
PFAMsPkinase,Pkinase_Tyr
Model size411
Max annot lvl2759|Eukaryota
KEGG koko:K04427,ko:K20717,ko:K20718
KEGG Pathwayko04010,ko04013,ko04016,ko04064,ko04140,ko04152,ko04214,ko04310,ko04380,ko04520,ko04620,ko04621,ko04622,ko04624,ko04657,ko04660,ko04668,ko05140,ko05145,ko05162,ko05168,ko05169,ko05418,map04010,map04013,map04016,map04064,map04140,map04152,map04214,map04310,map04380,map04520,map04620,map04621,map04622,map04624,map04657,map04660,map04668,map05140,map05145,map05162,map05168,map05169,map05418
KEGG ModuleM00686,M00688,M00689
Hectar predicted targeting categoryother localisation
Exons2
Evalue2.4e-40
EggNOG OGsCOG0515@1|root,KOG0192@2759|Eukaryota
EC2.7.11.1,2.7.11.25
Descriptionprotein kinase activity
Cds size411
COG categoryKLT
BRITEko00000,ko00001,ko00002,ko01000,ko01001
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789178.7257652-CDS-C-tenellus_contig11443:315..5861680789178.7257652-CDS-C-tenellus_contig11443:315..586Choristocarpus tenellus KU2346CDSC-tenellus_contig11443 316..586 -
1680789178.7355852-CDS-C-tenellus_contig11443:1132..12721680789178.7355852-CDS-C-tenellus_contig11443:1132..1272Choristocarpus tenellus KU2346CDSC-tenellus_contig11443 1133..1272 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig11443.1.1prot_C-tenellus_contig11443.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig11443 316..1272 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig11443.1.1

>prot_C-tenellus_contig11443.1.1 ID=prot_C-tenellus_contig11443.1.1|Name=mRNA_C-tenellus_contig11443.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=137bp
IKKQARQEKNLEAYLMRELAVLKHYQHDNLLQYIGASNVMARESGGVYVF
IVTELTCGGDLLALLLSEGEVGWKFRVSLLTDAARALEFLHSRSLIHRDI
KSPNMLIDSDRRCKIADFGMARQLGANMTVVGTGEC*
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mRNA from alignment at C-tenellus_contig11443:316..1272-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig11443.1.1 ID=mRNA_C-tenellus_contig11443.1.1|Name=mRNA_C-tenellus_contig11443.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=957bp|location=Sequence derived from alignment at C-tenellus_contig11443:316..1272- (Choristocarpus tenellus KU2346)
ATAAAGAAGCAGGCACGGCAAGAAAAAAATTTGGAGGCGTATCTGATGAG GGAGCTGGCTGTCCTCAAGCATTATCAGCATGACAACTTGCTCCAATATA TTGGAGCATCTAATGTCATGGCGAGAGAGTCTGGAGGTGTGTGTGTGTGT GTGTGTGTGTGTGTTTAGCTCTTTTTTGTTTGAATTTGGAAAATTTCTTT TCTCCCCTTTTTGGATTAACACAATAACAGCTTGAAAAGAAGAGGCTATA AAGGAATGCTTTTGGTAAAGGAATGCTTTTGGTAGAGAGGTAAGTCCCCA ACAACAGGTAGCAAGCATCCGCCACCTCAACCAGGGGGTATCCTCTCTCA CTCACTACTATGGAAAAAAACGCCATCTAATGTTTATTTCTCAAAGTTGA TATCTCGAAATTATTTTTGCCCTTGCAAGACCTGGCCCAACCCTAACCCT ACTAGATACTGCGGTAGCCTTCAATTAACACTACCAATATCCCTAACCCT AACCCTAACCCTAACCCGATTTATTCCCAGGCATAGCCCTAATACTGTGG TGACCTTTACTTCGCCGTACCAACAGCCCATGCCCCGACTTTGAGTGCAT GCCCTCTCTAAAAACTAACCCACAAAAAATTGGGAACAATATAAATACCC GTTATATTTTTTTTGGTGCTGTGCCGAAGGCCTGAGCTATGTGTTCATAG TCACAGAGTTGACCTGCGGCGGCGACCTGCTGGCACTGCTTCTGTCGGAA GGGGAGGTCGGGTGGAAATTTCGGGTATCTCTGCTTACAGACGCTGCGAG GGCGCTCGAGTTCCTCCACAGCCGGAGTCTGATCCACAGGGACATCAAGA GCCCCAACATGCTCATTGACTCGGATCGAAGGTGTAAGATTGCAGACTTT GGCATGGCGAGACAACTGGGTGCCAACATGACTGTGGTCGGCACCGGTGA GTGTTGA
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Coding sequence (CDS) from alignment at C-tenellus_contig11443:316..1272-

>mRNA_C-tenellus_contig11443.1.1 ID=mRNA_C-tenellus_contig11443.1.1|Name=mRNA_C-tenellus_contig11443.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=411bp|location=Sequence derived from alignment at C-tenellus_contig11443:316..1272- (Choristocarpus tenellus KU2346)
ATAAAGAAGCAGGCACGGCAAGAAAAAAATTTGGAGGCGTATCTGATGAG
GGAGCTGGCTGTCCTCAAGCATTATCAGCATGACAACTTGCTCCAATATA
TTGGAGCATCTAATGTCATGGCGAGAGAGTCTGGAGGTGTCTATGTGTTC
ATAGTCACAGAGTTGACCTGCGGCGGCGACCTGCTGGCACTGCTTCTGTC
GGAAGGGGAGGTCGGGTGGAAATTTCGGGTATCTCTGCTTACAGACGCTG
CGAGGGCGCTCGAGTTCCTCCACAGCCGGAGTCTGATCCACAGGGACATC
AAGAGCCCCAACATGCTCATTGACTCGGATCGAAGGTGTAAGATTGCAGA
CTTTGGCATGGCGAGACAACTGGGTGCCAACATGACTGTGGTCGGCACCG
GTGAGTGTTGA
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