mRNA_C-tenellus_contig114.5.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig114.5.1 vs. uniprot
Match: D7FPJ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPJ1_ECTSI) HSP 1 Score: 360 bits (923), Expect = 4.170e-119 Identity = 178/277 (64.26%), Postives = 218/277 (78.70%), Query Frame = 3 Query: 282 IDFRITEHAILRNDDPQTVSFVTGSNRGIGLEISRQLLSRTKGIVVAACRNPDQAEMLHHLHRLEGNKGRLDIVQMDVIDQSSIDEAAEHVKSQHKRLDLLFNVAGILGDGKTTPGPERSLKAIDRDWLQQTLLVNAIGPVMLTQAMAPLMLPGGGRRGGGHQGPTAPSVVINFSARVGSVTDNHLGGWHSYRMSKAMLNMWTKGLSLELRRKGVWAISYHPGTTDTGLSEPFQKNVRPEKLFTPAYTVGKLLDLVNSLEEEHSGGFYDFDGIRIPW 1112 + F TE A RN DP +V+FVTG+NRGIGLE++RQLL R KG VVAACR+P A L L R+ GN+ RLD+V+MD+ DQ+S++ AAEHV+S + R+DLLFNVAG+LGDGK TPGPERS++A+DRDWL+ TL VN IGP+ML A+ PL+ + G G PSVV+NFSARVGS+ DN LGGWHSYRMSK+ LNM TKG+S+ELRR+ VWA SYHPGTTDTGLSEPFQ NV+PEKLFTP YTV ++L +V+S+ E+ SGGFY FDG RI W Sbjct: 22 VKFVKTEAAARRNADPGSVAFVTGANRGIGLEVTRQLLERAKGTVVAACRDPSSAADLRALGRIAGNEKRLDMVKMDIEDQTSLETAAEHVRSTYGRVDLLFNVAGVLGDGKNTPGPERSVRAMDRDWLRHTLEVNTIGPMMLVAALTPLLESPAKK---GDDGAKPPSVVVNFSARVGSIGDNGLGGWHSYRMSKSALNMATKGISIELRRRRVWAFSYHPGTTDTGLSEPFQANVKPEKLFTPDYTVSQVLGIVDSMTEDLSGGFYAFDGSRIVW 295
BLAST of mRNA_C-tenellus_contig114.5.1 vs. uniprot
Match: A0A836C8A3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8A3_9STRA) HSP 1 Score: 312 bits (799), Expect = 1.810e-100 Identity = 154/268 (57.46%), Postives = 202/268 (75.37%), Query Frame = 3 Query: 315 RNDDPQTVSFVTGSNRGIGLEISRQLLSRTKGIVVAACRNPDQAEMLHHLHRLEGNKGRLDIVQMDVIDQSSIDEAAEHVKSQHK-RLDLLFNVAGILGDGKTTPGPERSLKAIDRDWLQQTLLVNAIGPVMLTQAMAP-LMLPGGGRRGGGHQGPTAPSVVINFSARVGSVTDNHLGGWHSYRMSKAMLNMWTKGLSLELRRKGVWAISYHPGTTDTGLSEPFQKNVRPEKLFTPAYTVGKLLDLVNSLEEEHSGGFYDFDGIRIPW 1112 RN D V +T ++RG+GLE+++QL SRT+G V+A+CR P +A L L + + GR+ ++++DV DQ+S+D AA HV + H RLD LFNVAG+LGDG+ TPGPERSL AI RDWL+ ++ VN IGPVML QAMAP L G GR PSVV+NFSARVGS++DN LGGWHSYRMSK+ LN TK ++LEL+R+G WA +YHPGTTDT LS PFQ NV+PEKLFTPA+TVG++LDL ++++++H+GGFYD+ G + W Sbjct: 32 RNADTGAVFLLTAASRGLGLELAKQLASRTQGHVIASCRQPSKALELQAL--AQSHPGRMTVLELDVTDQASVDAAAAHVAALHNGRLDALFNVAGLLGDGRATPGPERSLGAIQRDWLRHSMEVNVIGPVMLAQAMAPHLRTTGQGRA-------KTPSVVVNFSARVGSISDNRLGGWHSYRMSKSALNQATKCMALELKRQGTWAFAYHPGTTDTDLSRPFQANVKPEKLFTPAFTVGRMLDLCDNMDQQHTGGFYDYSGTFLLW 290
BLAST of mRNA_C-tenellus_contig114.5.1 vs. uniprot
Match: A0A7S2UED2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UED2_9STRA) HSP 1 Score: 284 bits (726), Expect = 6.510e-89 Identity = 141/290 (48.62%), Postives = 206/290 (71.03%), Query Frame = 3 Query: 270 VVQKIDFRIT----EHAILRNDDPQTVSFVTGSNRGIGLEISRQLLSRTKGIVVAACRNPDQAEMLHHLHRLEG-----NKGRLDIVQMDVIDQSSIDEAAEHVKSQHKRLDLLFNVAGILGDGKTTPGPERSLKAIDRDWLQQTLLVNAIGPVMLTQAMAPLMLPGGGRRGGGHQGPTAPSVVINFSARVGSVTDNHLGGWHSYRMSKAMLNMWTKGLSLELRRKGVWAISYHPGTTDTGLSEPFQKNVRPEKLFTPAYTVGKLLDLVNSLEEEHSGGFYDFDGIRIPW 1112 V IDF + +A+ RN DP V VTG++RGIGL+ + L+ RT+G +VA CR+P+ A LH ++ R++++++D+ DQ+SIDE + +++ + R+D+L NVAG+LGDG +TPGPERSL +DRDW+++++ VN IGPVML+QA++PLM +RG + A +++ N SARVGS++DN LGGW+SYR SKA LN T+ +S EL+RKG W I+ HPGTTDT LS+PFQ+NV+ E+LF +TV KLLD+++S+EE++SGG YD+ G IP+ Sbjct: 46 VYNDIDFSASTDPSSNAMKRNQDPNAVHVVTGASRGIGLQFVKSLIDRTEGKIVACCRSPENAHGLHTFLETMSLTDSLDRDRIEVLKLDIEDQTSIDELSNSIRNSYNRVDVLLNVAGLLGDGTSTPGPERSLAKLDRDWIEKSMAVNVIGPVMLSQALSPLMA--SPQRG--KEDKRATTLIANLSARVGSISDNGLGGWYSYRFSKAALNQATRTMSHELKRKGTWTIALHPGTTDTDLSKPFQRNVQAERLFPVEFTVEKLLDVMDSMEEQNSGGLYDWAGKAIPF 331
BLAST of mRNA_C-tenellus_contig114.5.1 vs. uniprot
Match: A0A7S2HD28_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HD28_9STRA) HSP 1 Score: 282 bits (721), Expect = 1.100e-87 Identity = 140/291 (48.11%), Postives = 199/291 (68.38%), Query Frame = 3 Query: 270 VVQKIDFRITEHAIL----RNDDPQTVSFVTGSNRGIGLEISRQLLSRTKGIVVAACRNPDQAEMLHH-LHRLEGNKGRLDIVQMDVIDQSSIDEAAEHVKSQHKRLDLLFNVAGILGDGKTTPGPERSLKAIDRDWLQQTLLVNAIGPVMLTQAMAPLMLP-----GGGRRGGGHQGPTAPSVVINFSARVGSVTDNHLGGWHSYRMSKAMLNMWTKGLSLELRRKGVWAISYHPGTTDTGLSEPFQKNVRPEKLFTPAYTVGKLLDLVNSLEEEHSGGFYDFDGIRIPW 1112 V + ID + +L RN DP V V GS+RGIGL+ + L+ R++G ++A CR+PD A+ L+ L R+ +Q+DV DQ+SID AAE +K+ + R+D LFNVAGILGDGK+ PGPERSL +DRDW+++T+ VN IGPVML+QA+AP+M+ A SV++N SARVGS++DN LGGW+SYR SK+ LN T+ ++ EL+R+G W ++ HPGTT+T LS+PFQ+NV+ +LF +TVG+LLD+V+ +E+ HSGG YD+ G +P+ Sbjct: 76 VYEDIDISADKEKLLVSSKRNGDPNAVFVVNGSSRGIGLQFVKSLVDRSQGTILACCRSPDSADKLNEFLSSSPQASQRVKTIQLDVEDQASIDAAAEEIKTSYNRVDCLFNVAGILGDGKSDPGPERSLSKLDRDWVEKTMAVNVIGPVMLSQALAPMMISKXXXXXXXXXXXXXXXXRAQSVIVNLSARVGSISDNELGGWYSYRFSKSALNQATRTMAHELKRQGTWTVALHPGTTNTDLSKPFQRNVQEGRLFPVEFTVGRLLDVVDGMEDRHSGGLYDWSGTALPF 366
BLAST of mRNA_C-tenellus_contig114.5.1 vs. uniprot
Match: A0A448YYN6_9STRA (Uncharacterized protein n=2 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YYN6_9STRA) HSP 1 Score: 275 bits (703), Expect = 6.130e-85 Identity = 144/295 (48.81%), Postives = 201/295 (68.14%), Query Frame = 3 Query: 270 VVQKIDFRI----TEHAILRNDDPQTVSFVTGSNRGIGLEISRQLLSRTKGIVVAACRNPDQAEMLHHLHRL--EGNKGRLDIVQMDVIDQSSIDEAAEHVKSQHKRLDLLFNVAGILGDGKTTPGPERSLKAIDRDWLQQTLLVNAIGPVMLTQAMAPLMLPGG--GRRGGGHQGPT------APSVVINFSARVGSVTDNHLGGWHSYRMSKAMLNMWTKGLSLELRRKGVWAISYHPGTTDTGLSEPFQKNVRPEKLFTPAYTVGKLLDLVNSLEEEHSGGFYDFDGIRIPW 1112 V + +DF + + + +RN DP V V G++RGIGL+ +LLS TKG V+A CR+PD A L L + ++ R++++++DV +Q SI+ +A +K Q+ R+DLL NVAGILGDGK TPGPERS+ I+R+W+++T VN IGPVML + +APLM GRR T A VV N SARVGS++DN LGGW+SYRMSK+ LN T+ L+ EL+RK VW I+ HPGTTDT LS+PFQKNV+ ++LF +TV L+++++S+EE +SGG YD+ G IP+ Sbjct: 76 VFEDVDFSVQGNPSSQSSIRNSDPDAVFLVNGASRGIGLQFVSKLLSDTKGRVIAGCRSPDDAPKLQDLLSTLDKKSRNRVEVIKLDVENQDSIELSAAEIKVQYGRVDLLLNVAGILGDGKNTPGPERSVAKIEREWMEKTFQVNVIGPVMLAKELAPLMTQARRTGRRKADSSDETLSEKQRAVGVVANLSARVGSISDNGLGGWYSYRMSKSALNQATRTLANELKRKSVWCIALHPGTTDTDLSKPFQKNVQKDRLFPVEFTVDSLMNVIDSMEEHNSGGLYDWAGKAIPF 370
BLAST of mRNA_C-tenellus_contig114.5.1 vs. uniprot
Match: A0A7S2YRX8_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YRX8_9STRA) HSP 1 Score: 272 bits (696), Expect = 1.040e-83 Identity = 137/270 (50.74%), Postives = 193/270 (71.48%), Query Frame = 3 Query: 306 AILRNDDPQTVSFVTGSNRGIGLEISRQLLSRTKGIVVAACRNPDQAEMLHHLHRLEGNKGRLDIVQMDVIDQSSIDEAAEHVKSQHKRLDLLFNVAGILGDG-KTTPGPERSLKAIDRDWLQQTLLVNAIGPVMLTQAMAPLMLPGGGRRGGGHQGPTAPS-----VVINFSARVGSVTDNHLGGWHSYRMSKAMLNMWTKGLSLELRRKGVWAISYHPGTTDTGLSEPFQKNVRPEKLFTPAYTVGKLLDLVNSLEEEHSGGFYDFDG 1097 ++ RN DP+ V VTG++RGIGL+ + LL RTKG +VA CR+P A L L + R+DIV +D+ +QS+I++A ++ ++ R+D LFNVAG+LGDG KTTPGPERS+ +DR WL++T+ VN IGPVMLT+ ++ +++ +R +G A + VV+N SARVGS+ DN LGGW+SYRMSK+ LN T+ ++LEL+R+ WA++ HPGTT+T LS PFQ NV+ LF +TVG+LLDLV+ LE++HSGGFYD+ G Sbjct: 111 SVKRNQDPRAVFVVTGASRGIGLQFVKSLLERTKGTIVACCRSPSAATELIELRESMSSSKRIDIVALDLEEQSTIEKAGSFLREKYDRVDGLFNVAGLLGDGGKTTPGPERSISKMDRGWLEKTMAVNVIGPVMLTKELSSMIMTRR-KRQRSKEGDIADTERPIAVVVNLSARVGSIADNGLGGWYSYRMSKSALNQATRTMALELKRQSAWAVALHPGTTNTDLSRPFQANVKEGSLFPVEFTVGQLLDLVDRLEDKHSGGFYDWAG 379
BLAST of mRNA_C-tenellus_contig114.5.1 vs. uniprot
Match: A0A7S4MLR2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MLR2_9STRA) HSP 1 Score: 269 bits (687), Expect = 1.700e-82 Identity = 141/300 (47.00%), Postives = 198/300 (66.00%), Query Frame = 3 Query: 255 DVNLPVVQKIDFRITEHAILRNDDPQTVSFVTGSNRGIGLEISRQLLSRTKGIVVAACRNPDQAEMLHHLHRL--EGNKGRLDIVQMDVIDQSSIDEAAEHVKSQHKRLDLLFNVAGILGDG-KTTPGPERSLKAIDRDWLQQTLLVNAIGPVMLTQAMAPLMLPGGGR-----------RGGGHQGPTAPSVVINFSARVGSVTDNHLGGWHSYRMSKAMLNMWTKGLSLELRRKGVWAISYHPGTTDTGLSEPFQKNVRPEKLFTPAYTVGKLLDLVNSLEEEHSGGFYDFDGIRIPW 1112 D++ P + A RN DP V +TG+NRGIGL+ + +L R++G + A CR+P AE L + + R+ +V++DV DQ SI+ AA+ +++++ R+D L NVAGILGDG ++TPGPERSL IDR+W ++L VN IGPVML QA+APLM GGR G + APS+V N SARVGS++DN LGGW+SYR+SKA LN T+ ++ EL+R+G A++ HPGTTDT LS PFQ+NV +LF +TV +LLD +++L++EHSGG YD+ G +P+ Sbjct: 75 DLSTPGTPSXXXXXXDEANQRNADPHAVFVITGANRGIGLQFVKAVLDRSRGRIAACCRSPRDAEALEAVKASLPAEERERIRLVRLDVEDQMSIEGAADEIRTEYGRVDALLNVAGILGDGGESTPGPERSLGKIDREWTAKSLAVNVIGPVMLAQALAPLMRTKGGRGQRRTRRKTSDEGEEKEEQRAPSIVANLSARVGSISDNELGGWYSYRLSKAALNQATRTMAHELKRQGTRAVALHPGTTDTDLSAPFQRNVAEGRLFPVEFTVRQLLDCIDNLDDEHSGGLYDWSGRALPF 374
BLAST of mRNA_C-tenellus_contig114.5.1 vs. uniprot
Match: A0A7S3L7K7_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L7K7_9STRA) HSP 1 Score: 265 bits (677), Expect = 2.320e-81 Identity = 136/285 (47.72%), Postives = 190/285 (66.67%), Query Frame = 3 Query: 267 PVVQKIDFRITE-HAILRNDDPQTVSFVTGSNRGIGLEISRQLLSRTKGIVVAACRNPDQAEMLHHLHRLEGNKGRLDIVQMDVIDQSSIDEAAEHVKSQHKRLDLLFNVAGILGDGKTTPGPERSLKAIDRDWLQQTLLVNAIGPVMLTQAMAPLMLPGGGRR-------GGGHQGPTAPSVVINFSARVGSVTDNHLGGWHSYRMSKAMLNMWTKGLSLELRRKGVWAISYHPGTTDTGLSEPFQKNVRPEKLFTPAYTVGKLLDLVNSLEEEHSGGFYDFDG 1097 PV IDF + + RN DP+ V VTG++RGIGL+ + L ++T+G +VA CR P+QA L+ N R++++ +D+ +QSSI+ V++ + R+D+L NVAG+LGD KTTPGPERSL +DR W + +L +N IGPVM+TQ + PL+ G RR G P A VV N SARVGS++DN +GGW+SYR+SKA LN T+ ++LEL R+ VW ++ HPGTTDT LS+PFQ NV+ E LF +TV +LL +++S+ EHSGG YD+ G Sbjct: 63 PVFPDIDFSLVSMESEKRNQDPEAVFVVTGASRGIGLQFVKALTTKTQGKIVACCRKPEQATQLNEFIGTLPNPSRVEVIPLDLEEQSSIEAFGTRVRNTYNRVDILLNVAGLLGDSKTTPGPERSLARVDRKWFETSLAINLIGPVMVTQELVPLL---GQRRRPRKDNDDGTKDRPAA--VVANLSARVGSISDNRIGGWYSYRISKAGLNQATRTMALELGRQSVWCVALHPGTTDTDLSKPFQANVKKESLFPVDFTVNQLLSVIDSVHAEHSGGLYDWAG 342
BLAST of mRNA_C-tenellus_contig114.5.1 vs. uniprot
Match: A0A7S2PC45_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PC45_9STRA) HSP 1 Score: 262 bits (669), Expect = 3.530e-80 Identity = 142/280 (50.71%), Postives = 193/280 (68.93%), Query Frame = 3 Query: 297 TEHAILRNDDPQTVSFVTGSNRGIGLEISRQLLSRTKGIVVAACRNPDQAEMLHHLHRLEGNKGRLDIVQMDVIDQSSIDEAAEHVKSQHKRLDLLFNVAGILGDG-KTTPGPERSLKAIDRDWLQQTLLVNAIGPVMLTQAMAPLMLPGG-GRR------GGGHQGPTAPSVVINFSARVGSVTDNHLGGWHSYRMSKAMLNMWTKGLSLELRRKGVWAISYHPGTTDTGLSEPFQKNVRPEKLFTPAYTVGKLLDLVNSLEEEHSGGFYDFDGIRIPW 1112 T A+ RN D V VTG++RGIG E+ ++LL RTKG+VVA CRNPD E+ + E K RL ++Q+D+ Q I+ + +KS+ R+D LFNVAG+LGDG KTT GPERSL AI+R W ++ + +N IGPV+LTQA+ P+M GR+ G H+ P +VV N SARVGS++DN LGGW+SYR+SKA LN T+ ++ EL+R+G A+S HPGTTDT LS+PF KNV+ LF +TV ++LD+V++LE +HSGG YD+ G IP+ Sbjct: 72 TADALERNKDECAVMVVTGASRGIGREMVKRLLERTKGMVVACCRNPDDFEVSANE---EVFKHRLTVMQLDLEKQDQIEALTDEIKSKFNRVDALFNVAGLLGDGGKTTTGPERSLAAIERSWFEKNMAINVIGPVLLTQALTPMMRSKQRGRQQKTDDDGVPHERPQ--TVVTNLSARVGSISDNRLGGWYSYRISKAALNQATRTMAHELKRQGTLAVSLHPGTTDTDLSQPFSKNVKKGSLFPVEFTVDQILDIVDALEGKHSGGLYDWAGKAIPF 346
BLAST of mRNA_C-tenellus_contig114.5.1 vs. uniprot
Match: A0A7S2XMR2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XMR2_9STRA) HSP 1 Score: 258 bits (659), Expect = 1.420e-79 Identity = 131/268 (48.88%), Postives = 192/268 (71.64%), Query Frame = 3 Query: 315 RNDDPQTVSFVTGSNRGIGLEISRQLLSRTKGIVVAACRNPDQAEMLHHLHRLEGNKGRLDIVQMDVIDQSSIDEAAEHVKSQ-HKRLDLLFNVAGILGDGKTTPGPERSLKAIDRDWLQQTLLVNAIGPVMLTQAMAPLMLPGGGRRGGGHQGPTAPSVVINFSARVGSVTDNHLG-GWHSYRMSKAMLNMWTKGLSLELRRKGVWAISYHPGTTDTGLSEPFQKNVRPEKLFTPAYTVGKLLDLVNSLEEEHSGGFYDFDGIRIPW 1112 RN D V V+G++RG+GL+ ++ LL RT G +VA CR PDQAE L + +G+ GR+ ++ +DV DQ+SI A+ +++ H R+D L+N+AGILGD + GPER++ +++ W +Q L VN IGP+M+TQA+AP+M G++ + TA SVV+N SARVGS+ DN G GWHSYR+SKA LNM T+ L EL+R+GVW ++ +PG TDT LS+PFQK V+P+K+F +TVG+++D+V+ +EE+HSGG YD+ G +P+ Sbjct: 19 RNVDSDAVFVVSGASRGMGLQFTKDLLLRTSGTIVACCRTPDQAEELARV--ADGSSGRVLVLPLDVTDQTSIANMAKEIETTYHGRVDALYNIAGILGDPGPS-GPERNIAGMNKSWFEQNLAVNTIGPMMVTQALAPMMQTKRGKKY--VKDKTAESVVVNMSARVGSIADNQGGLGWHSYRISKAALNMGTRILGHELKRQGVWTVALYPGFTDTDLSKPFQKGVKPDKIFPVDFTVGRMIDVVDGMEEKHSGGLYDWAGQALPF 281 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig114.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig114.5.1 >prot_C-tenellus_contig114.5.1 ID=prot_C-tenellus_contig114.5.1|Name=mRNA_C-tenellus_contig114.5.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=341bp MPATPVPTSSLRGISAWGRSLPWNLRQTTGLVPSIARIDEVARGMRCASMback to top mRNA from alignment at C-tenellus_contig114:8188..11495+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig114.5.1 ID=mRNA_C-tenellus_contig114.5.1|Name=mRNA_C-tenellus_contig114.5.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3308bp|location=Sequence derived from alignment at C-tenellus_contig114:8188..11495+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig114:8188..11495+ >mRNA_C-tenellus_contig114.5.1 ID=mRNA_C-tenellus_contig114.5.1|Name=mRNA_C-tenellus_contig114.5.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1023bp|location=Sequence derived from alignment at C-tenellus_contig114:8188..11495+ (Choristocarpus tenellus KU2346)back to top |