mRNA_C-tenellus_contig114.5.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig114.5.1
Unique NamemRNA_C-tenellus_contig114.5.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig114.5.1 vs. uniprot
Match: D7FPJ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPJ1_ECTSI)

HSP 1 Score: 360 bits (923), Expect = 4.170e-119
Identity = 178/277 (64.26%), Postives = 218/277 (78.70%), Query Frame = 3
Query:  282 IDFRITEHAILRNDDPQTVSFVTGSNRGIGLEISRQLLSRTKGIVVAACRNPDQAEMLHHLHRLEGNKGRLDIVQMDVIDQSSIDEAAEHVKSQHKRLDLLFNVAGILGDGKTTPGPERSLKAIDRDWLQQTLLVNAIGPVMLTQAMAPLMLPGGGRRGGGHQGPTAPSVVINFSARVGSVTDNHLGGWHSYRMSKAMLNMWTKGLSLELRRKGVWAISYHPGTTDTGLSEPFQKNVRPEKLFTPAYTVGKLLDLVNSLEEEHSGGFYDFDGIRIPW 1112
            + F  TE A  RN DP +V+FVTG+NRGIGLE++RQLL R KG VVAACR+P  A  L  L R+ GN+ RLD+V+MD+ DQ+S++ AAEHV+S + R+DLLFNVAG+LGDGK TPGPERS++A+DRDWL+ TL VN IGP+ML  A+ PL+     +   G  G   PSVV+NFSARVGS+ DN LGGWHSYRMSK+ LNM TKG+S+ELRR+ VWA SYHPGTTDTGLSEPFQ NV+PEKLFTP YTV ++L +V+S+ E+ SGGFY FDG RI W
Sbjct:   22 VKFVKTEAAARRNADPGSVAFVTGANRGIGLEVTRQLLERAKGTVVAACRDPSSAADLRALGRIAGNEKRLDMVKMDIEDQTSLETAAEHVRSTYGRVDLLFNVAGVLGDGKNTPGPERSVRAMDRDWLRHTLEVNTIGPMMLVAALTPLLESPAKK---GDDGAKPPSVVVNFSARVGSIGDNGLGGWHSYRMSKSALNMATKGISIELRRRRVWAFSYHPGTTDTGLSEPFQANVKPEKLFTPDYTVSQVLGIVDSMTEDLSGGFYAFDGSRIVW 295          
BLAST of mRNA_C-tenellus_contig114.5.1 vs. uniprot
Match: A0A836C8A3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8A3_9STRA)

HSP 1 Score: 312 bits (799), Expect = 1.810e-100
Identity = 154/268 (57.46%), Postives = 202/268 (75.37%), Query Frame = 3
Query:  315 RNDDPQTVSFVTGSNRGIGLEISRQLLSRTKGIVVAACRNPDQAEMLHHLHRLEGNKGRLDIVQMDVIDQSSIDEAAEHVKSQHK-RLDLLFNVAGILGDGKTTPGPERSLKAIDRDWLQQTLLVNAIGPVMLTQAMAP-LMLPGGGRRGGGHQGPTAPSVVINFSARVGSVTDNHLGGWHSYRMSKAMLNMWTKGLSLELRRKGVWAISYHPGTTDTGLSEPFQKNVRPEKLFTPAYTVGKLLDLVNSLEEEHSGGFYDFDGIRIPW 1112
            RN D   V  +T ++RG+GLE+++QL SRT+G V+A+CR P +A  L  L   + + GR+ ++++DV DQ+S+D AA HV + H  RLD LFNVAG+LGDG+ TPGPERSL AI RDWL+ ++ VN IGPVML QAMAP L   G GR          PSVV+NFSARVGS++DN LGGWHSYRMSK+ LN  TK ++LEL+R+G WA +YHPGTTDT LS PFQ NV+PEKLFTPA+TVG++LDL ++++++H+GGFYD+ G  + W
Sbjct:   32 RNADTGAVFLLTAASRGLGLELAKQLASRTQGHVIASCRQPSKALELQAL--AQSHPGRMTVLELDVTDQASVDAAAAHVAALHNGRLDALFNVAGLLGDGRATPGPERSLGAIQRDWLRHSMEVNVIGPVMLAQAMAPHLRTTGQGRA-------KTPSVVVNFSARVGSISDNRLGGWHSYRMSKSALNQATKCMALELKRQGTWAFAYHPGTTDTDLSRPFQANVKPEKLFTPAFTVGRMLDLCDNMDQQHTGGFYDYSGTFLLW 290          
BLAST of mRNA_C-tenellus_contig114.5.1 vs. uniprot
Match: A0A7S2UED2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UED2_9STRA)

HSP 1 Score: 284 bits (726), Expect = 6.510e-89
Identity = 141/290 (48.62%), Postives = 206/290 (71.03%), Query Frame = 3
Query:  270 VVQKIDFRIT----EHAILRNDDPQTVSFVTGSNRGIGLEISRQLLSRTKGIVVAACRNPDQAEMLHHLHRLEG-----NKGRLDIVQMDVIDQSSIDEAAEHVKSQHKRLDLLFNVAGILGDGKTTPGPERSLKAIDRDWLQQTLLVNAIGPVMLTQAMAPLMLPGGGRRGGGHQGPTAPSVVINFSARVGSVTDNHLGGWHSYRMSKAMLNMWTKGLSLELRRKGVWAISYHPGTTDTGLSEPFQKNVRPEKLFTPAYTVGKLLDLVNSLEEEHSGGFYDFDGIRIPW 1112
            V   IDF  +     +A+ RN DP  V  VTG++RGIGL+  + L+ RT+G +VA CR+P+ A  LH            ++ R++++++D+ DQ+SIDE +  +++ + R+D+L NVAG+LGDG +TPGPERSL  +DRDW+++++ VN IGPVML+QA++PLM     +RG   +   A +++ N SARVGS++DN LGGW+SYR SKA LN  T+ +S EL+RKG W I+ HPGTTDT LS+PFQ+NV+ E+LF   +TV KLLD+++S+EE++SGG YD+ G  IP+
Sbjct:   46 VYNDIDFSASTDPSSNAMKRNQDPNAVHVVTGASRGIGLQFVKSLIDRTEGKIVACCRSPENAHGLHTFLETMSLTDSLDRDRIEVLKLDIEDQTSIDELSNSIRNSYNRVDVLLNVAGLLGDGTSTPGPERSLAKLDRDWIEKSMAVNVIGPVMLSQALSPLMA--SPQRG--KEDKRATTLIANLSARVGSISDNGLGGWYSYRFSKAALNQATRTMSHELKRKGTWTIALHPGTTDTDLSKPFQRNVQAERLFPVEFTVEKLLDVMDSMEEQNSGGLYDWAGKAIPF 331          
BLAST of mRNA_C-tenellus_contig114.5.1 vs. uniprot
Match: A0A7S2HD28_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HD28_9STRA)

HSP 1 Score: 282 bits (721), Expect = 1.100e-87
Identity = 140/291 (48.11%), Postives = 199/291 (68.38%), Query Frame = 3
Query:  270 VVQKIDFRITEHAIL----RNDDPQTVSFVTGSNRGIGLEISRQLLSRTKGIVVAACRNPDQAEMLHH-LHRLEGNKGRLDIVQMDVIDQSSIDEAAEHVKSQHKRLDLLFNVAGILGDGKTTPGPERSLKAIDRDWLQQTLLVNAIGPVMLTQAMAPLMLP-----GGGRRGGGHQGPTAPSVVINFSARVGSVTDNHLGGWHSYRMSKAMLNMWTKGLSLELRRKGVWAISYHPGTTDTGLSEPFQKNVRPEKLFTPAYTVGKLLDLVNSLEEEHSGGFYDFDGIRIPW 1112
            V + ID    +  +L    RN DP  V  V GS+RGIGL+  + L+ R++G ++A CR+PD A+ L+  L        R+  +Q+DV DQ+SID AAE +K+ + R+D LFNVAGILGDGK+ PGPERSL  +DRDW+++T+ VN IGPVML+QA+AP+M+                   A SV++N SARVGS++DN LGGW+SYR SK+ LN  T+ ++ EL+R+G W ++ HPGTT+T LS+PFQ+NV+  +LF   +TVG+LLD+V+ +E+ HSGG YD+ G  +P+
Sbjct:   76 VYEDIDISADKEKLLVSSKRNGDPNAVFVVNGSSRGIGLQFVKSLVDRSQGTILACCRSPDSADKLNEFLSSSPQASQRVKTIQLDVEDQASIDAAAEEIKTSYNRVDCLFNVAGILGDGKSDPGPERSLSKLDRDWVEKTMAVNVIGPVMLSQALAPMMISKXXXXXXXXXXXXXXXXRAQSVIVNLSARVGSISDNELGGWYSYRFSKSALNQATRTMAHELKRQGTWTVALHPGTTNTDLSKPFQRNVQEGRLFPVEFTVGRLLDVVDGMEDRHSGGLYDWSGTALPF 366          
BLAST of mRNA_C-tenellus_contig114.5.1 vs. uniprot
Match: A0A448YYN6_9STRA (Uncharacterized protein n=2 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YYN6_9STRA)

HSP 1 Score: 275 bits (703), Expect = 6.130e-85
Identity = 144/295 (48.81%), Postives = 201/295 (68.14%), Query Frame = 3
Query:  270 VVQKIDFRI----TEHAILRNDDPQTVSFVTGSNRGIGLEISRQLLSRTKGIVVAACRNPDQAEMLHHLHRL--EGNKGRLDIVQMDVIDQSSIDEAAEHVKSQHKRLDLLFNVAGILGDGKTTPGPERSLKAIDRDWLQQTLLVNAIGPVMLTQAMAPLMLPGG--GRRGGGHQGPT------APSVVINFSARVGSVTDNHLGGWHSYRMSKAMLNMWTKGLSLELRRKGVWAISYHPGTTDTGLSEPFQKNVRPEKLFTPAYTVGKLLDLVNSLEEEHSGGFYDFDGIRIPW 1112
            V + +DF +    +  + +RN DP  V  V G++RGIGL+   +LLS TKG V+A CR+PD A  L  L     + ++ R++++++DV +Q SI+ +A  +K Q+ R+DLL NVAGILGDGK TPGPERS+  I+R+W+++T  VN IGPVML + +APLM      GRR       T      A  VV N SARVGS++DN LGGW+SYRMSK+ LN  T+ L+ EL+RK VW I+ HPGTTDT LS+PFQKNV+ ++LF   +TV  L+++++S+EE +SGG YD+ G  IP+
Sbjct:   76 VFEDVDFSVQGNPSSQSSIRNSDPDAVFLVNGASRGIGLQFVSKLLSDTKGRVIAGCRSPDDAPKLQDLLSTLDKKSRNRVEVIKLDVENQDSIELSAAEIKVQYGRVDLLLNVAGILGDGKNTPGPERSVAKIEREWMEKTFQVNVIGPVMLAKELAPLMTQARRTGRRKADSSDETLSEKQRAVGVVANLSARVGSISDNGLGGWYSYRMSKSALNQATRTLANELKRKSVWCIALHPGTTDTDLSKPFQKNVQKDRLFPVEFTVDSLMNVIDSMEEHNSGGLYDWAGKAIPF 370          
BLAST of mRNA_C-tenellus_contig114.5.1 vs. uniprot
Match: A0A7S2YRX8_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YRX8_9STRA)

HSP 1 Score: 272 bits (696), Expect = 1.040e-83
Identity = 137/270 (50.74%), Postives = 193/270 (71.48%), Query Frame = 3
Query:  306 AILRNDDPQTVSFVTGSNRGIGLEISRQLLSRTKGIVVAACRNPDQAEMLHHLHRLEGNKGRLDIVQMDVIDQSSIDEAAEHVKSQHKRLDLLFNVAGILGDG-KTTPGPERSLKAIDRDWLQQTLLVNAIGPVMLTQAMAPLMLPGGGRRGGGHQGPTAPS-----VVINFSARVGSVTDNHLGGWHSYRMSKAMLNMWTKGLSLELRRKGVWAISYHPGTTDTGLSEPFQKNVRPEKLFTPAYTVGKLLDLVNSLEEEHSGGFYDFDG 1097
            ++ RN DP+ V  VTG++RGIGL+  + LL RTKG +VA CR+P  A  L  L     +  R+DIV +D+ +QS+I++A   ++ ++ R+D LFNVAG+LGDG KTTPGPERS+  +DR WL++T+ VN IGPVMLT+ ++ +++    +R    +G  A +     VV+N SARVGS+ DN LGGW+SYRMSK+ LN  T+ ++LEL+R+  WA++ HPGTT+T LS PFQ NV+   LF   +TVG+LLDLV+ LE++HSGGFYD+ G
Sbjct:  111 SVKRNQDPRAVFVVTGASRGIGLQFVKSLLERTKGTIVACCRSPSAATELIELRESMSSSKRIDIVALDLEEQSTIEKAGSFLREKYDRVDGLFNVAGLLGDGGKTTPGPERSISKMDRGWLEKTMAVNVIGPVMLTKELSSMIMTRR-KRQRSKEGDIADTERPIAVVVNLSARVGSIADNGLGGWYSYRMSKSALNQATRTMALELKRQSAWAVALHPGTTNTDLSRPFQANVKEGSLFPVEFTVGQLLDLVDRLEDKHSGGFYDWAG 379          
BLAST of mRNA_C-tenellus_contig114.5.1 vs. uniprot
Match: A0A7S4MLR2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MLR2_9STRA)

HSP 1 Score: 269 bits (687), Expect = 1.700e-82
Identity = 141/300 (47.00%), Postives = 198/300 (66.00%), Query Frame = 3
Query:  255 DVNLPVVQKIDFRITEHAILRNDDPQTVSFVTGSNRGIGLEISRQLLSRTKGIVVAACRNPDQAEMLHHLHRL--EGNKGRLDIVQMDVIDQSSIDEAAEHVKSQHKRLDLLFNVAGILGDG-KTTPGPERSLKAIDRDWLQQTLLVNAIGPVMLTQAMAPLMLPGGGR-----------RGGGHQGPTAPSVVINFSARVGSVTDNHLGGWHSYRMSKAMLNMWTKGLSLELRRKGVWAISYHPGTTDTGLSEPFQKNVRPEKLFTPAYTVGKLLDLVNSLEEEHSGGFYDFDGIRIPW 1112
            D++ P          + A  RN DP  V  +TG+NRGIGL+  + +L R++G + A CR+P  AE L  +        + R+ +V++DV DQ SI+ AA+ +++++ R+D L NVAGILGDG ++TPGPERSL  IDR+W  ++L VN IGPVML QA+APLM   GGR            G   +   APS+V N SARVGS++DN LGGW+SYR+SKA LN  T+ ++ EL+R+G  A++ HPGTTDT LS PFQ+NV   +LF   +TV +LLD +++L++EHSGG YD+ G  +P+
Sbjct:   75 DLSTPGTPSXXXXXXDEANQRNADPHAVFVITGANRGIGLQFVKAVLDRSRGRIAACCRSPRDAEALEAVKASLPAEERERIRLVRLDVEDQMSIEGAADEIRTEYGRVDALLNVAGILGDGGESTPGPERSLGKIDREWTAKSLAVNVIGPVMLAQALAPLMRTKGGRGQRRTRRKTSDEGEEKEEQRAPSIVANLSARVGSISDNELGGWYSYRLSKAALNQATRTMAHELKRQGTRAVALHPGTTDTDLSAPFQRNVAEGRLFPVEFTVRQLLDCIDNLDDEHSGGLYDWSGRALPF 374          
BLAST of mRNA_C-tenellus_contig114.5.1 vs. uniprot
Match: A0A7S3L7K7_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L7K7_9STRA)

HSP 1 Score: 265 bits (677), Expect = 2.320e-81
Identity = 136/285 (47.72%), Postives = 190/285 (66.67%), Query Frame = 3
Query:  267 PVVQKIDFRITE-HAILRNDDPQTVSFVTGSNRGIGLEISRQLLSRTKGIVVAACRNPDQAEMLHHLHRLEGNKGRLDIVQMDVIDQSSIDEAAEHVKSQHKRLDLLFNVAGILGDGKTTPGPERSLKAIDRDWLQQTLLVNAIGPVMLTQAMAPLMLPGGGRR-------GGGHQGPTAPSVVINFSARVGSVTDNHLGGWHSYRMSKAMLNMWTKGLSLELRRKGVWAISYHPGTTDTGLSEPFQKNVRPEKLFTPAYTVGKLLDLVNSLEEEHSGGFYDFDG 1097
            PV   IDF +    +  RN DP+ V  VTG++RGIGL+  + L ++T+G +VA CR P+QA  L+       N  R++++ +D+ +QSSI+     V++ + R+D+L NVAG+LGD KTTPGPERSL  +DR W + +L +N IGPVM+TQ + PL+   G RR        G    P A  VV N SARVGS++DN +GGW+SYR+SKA LN  T+ ++LEL R+ VW ++ HPGTTDT LS+PFQ NV+ E LF   +TV +LL +++S+  EHSGG YD+ G
Sbjct:   63 PVFPDIDFSLVSMESEKRNQDPEAVFVVTGASRGIGLQFVKALTTKTQGKIVACCRKPEQATQLNEFIGTLPNPSRVEVIPLDLEEQSSIEAFGTRVRNTYNRVDILLNVAGLLGDSKTTPGPERSLARVDRKWFETSLAINLIGPVMVTQELVPLL---GQRRRPRKDNDDGTKDRPAA--VVANLSARVGSISDNRIGGWYSYRISKAGLNQATRTMALELGRQSVWCVALHPGTTDTDLSKPFQANVKKESLFPVDFTVNQLLSVIDSVHAEHSGGLYDWAG 342          
BLAST of mRNA_C-tenellus_contig114.5.1 vs. uniprot
Match: A0A7S2PC45_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PC45_9STRA)

HSP 1 Score: 262 bits (669), Expect = 3.530e-80
Identity = 142/280 (50.71%), Postives = 193/280 (68.93%), Query Frame = 3
Query:  297 TEHAILRNDDPQTVSFVTGSNRGIGLEISRQLLSRTKGIVVAACRNPDQAEMLHHLHRLEGNKGRLDIVQMDVIDQSSIDEAAEHVKSQHKRLDLLFNVAGILGDG-KTTPGPERSLKAIDRDWLQQTLLVNAIGPVMLTQAMAPLMLPGG-GRR------GGGHQGPTAPSVVINFSARVGSVTDNHLGGWHSYRMSKAMLNMWTKGLSLELRRKGVWAISYHPGTTDTGLSEPFQKNVRPEKLFTPAYTVGKLLDLVNSLEEEHSGGFYDFDGIRIPW 1112
            T  A+ RN D   V  VTG++RGIG E+ ++LL RTKG+VVA CRNPD  E+  +    E  K RL ++Q+D+  Q  I+   + +KS+  R+D LFNVAG+LGDG KTT GPERSL AI+R W ++ + +N IGPV+LTQA+ P+M     GR+      G  H+ P   +VV N SARVGS++DN LGGW+SYR+SKA LN  T+ ++ EL+R+G  A+S HPGTTDT LS+PF KNV+   LF   +TV ++LD+V++LE +HSGG YD+ G  IP+
Sbjct:   72 TADALERNKDECAVMVVTGASRGIGREMVKRLLERTKGMVVACCRNPDDFEVSANE---EVFKHRLTVMQLDLEKQDQIEALTDEIKSKFNRVDALFNVAGLLGDGGKTTTGPERSLAAIERSWFEKNMAINVIGPVLLTQALTPMMRSKQRGRQQKTDDDGVPHERPQ--TVVTNLSARVGSISDNRLGGWYSYRISKAALNQATRTMAHELKRQGTLAVSLHPGTTDTDLSQPFSKNVKKGSLFPVEFTVDQILDIVDALEGKHSGGLYDWAGKAIPF 346          
BLAST of mRNA_C-tenellus_contig114.5.1 vs. uniprot
Match: A0A7S2XMR2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XMR2_9STRA)

HSP 1 Score: 258 bits (659), Expect = 1.420e-79
Identity = 131/268 (48.88%), Postives = 192/268 (71.64%), Query Frame = 3
Query:  315 RNDDPQTVSFVTGSNRGIGLEISRQLLSRTKGIVVAACRNPDQAEMLHHLHRLEGNKGRLDIVQMDVIDQSSIDEAAEHVKSQ-HKRLDLLFNVAGILGDGKTTPGPERSLKAIDRDWLQQTLLVNAIGPVMLTQAMAPLMLPGGGRRGGGHQGPTAPSVVINFSARVGSVTDNHLG-GWHSYRMSKAMLNMWTKGLSLELRRKGVWAISYHPGTTDTGLSEPFQKNVRPEKLFTPAYTVGKLLDLVNSLEEEHSGGFYDFDGIRIPW 1112
            RN D   V  V+G++RG+GL+ ++ LL RT G +VA CR PDQAE L  +   +G+ GR+ ++ +DV DQ+SI   A+ +++  H R+D L+N+AGILGD   + GPER++  +++ W +Q L VN IGP+M+TQA+AP+M    G++    +  TA SVV+N SARVGS+ DN  G GWHSYR+SKA LNM T+ L  EL+R+GVW ++ +PG TDT LS+PFQK V+P+K+F   +TVG+++D+V+ +EE+HSGG YD+ G  +P+
Sbjct:   19 RNVDSDAVFVVSGASRGMGLQFTKDLLLRTSGTIVACCRTPDQAEELARV--ADGSSGRVLVLPLDVTDQTSIANMAKEIETTYHGRVDALYNIAGILGDPGPS-GPERNIAGMNKSWFEQNLAVNTIGPMMVTQALAPMMQTKRGKKY--VKDKTAESVVVNMSARVGSIADNQGGLGWHSYRISKAALNMGTRILGHELKRQGVWTVALYPGFTDTDLSKPFQKGVKPDKIFPVDFTVGRMIDVVDGMEEKHSGGLYDWAGQALPF 281          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig114.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPJ1_ECTSI4.170e-11964.26Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C8A3_9STRA1.810e-10057.46Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2UED2_9STRA6.510e-8948.62Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2HD28_9STRA1.100e-8748.11Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A448YYN6_9STRA6.130e-8548.81Uncharacterized protein n=2 Tax=Pseudo-nitzschia m... [more]
A0A7S2YRX8_9STRA1.040e-8350.74Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S4MLR2_9STRA1.700e-8247.00Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S3L7K7_9STRA2.320e-8147.72Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S2PC45_9STRA3.530e-8050.71Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2XMR2_9STRA1.420e-7948.88Hypothetical protein n=1 Tax=Attheya septentrional... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig114contigC-tenellus_contig114:8188..11495 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FPJ1
PFAMsadh_short,adh_short_C2
Model size1456
Max annot lvl2759|Eukaryota
KEGG koko:K19877
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0010033,GO:0016491,GO:0042221,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0097237,GO:0098754,GO:0110095,GO:0110096,GO:1901700,GO:1901701,GO:1990748
Exons4
Evalue1.62e-122
EggNOG OGsCOG1028@1|root,KOG1611@2759|Eukaryota
Descriptioncellular detoxification of aldehyde
Cds size1023
COG categoryIQ
BRITEko00000,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig114.5.1prot_C-tenellus_contig114.5.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig114 8280..11154 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789176.8423328-UTR-C-tenellus_contig114:8187..82791680789176.8423328-UTR-C-tenellus_contig114:8187..8279Choristocarpus tenellus KU2346UTRC-tenellus_contig114 8188..8279 +
1680789176.9020984-UTR-C-tenellus_contig114:11154..114951680789176.9020984-UTR-C-tenellus_contig114:11154..11495Choristocarpus tenellus KU2346UTRC-tenellus_contig114 11155..11495 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789176.8546839-CDS-C-tenellus_contig114:8279..85951680789176.8546839-CDS-C-tenellus_contig114:8279..8595Choristocarpus tenellus KU2346CDSC-tenellus_contig114 8280..8595 +
1680789176.8667321-CDS-C-tenellus_contig114:9235..93961680789176.8667321-CDS-C-tenellus_contig114:9235..9396Choristocarpus tenellus KU2346CDSC-tenellus_contig114 9236..9396 +
1680789176.8798277-CDS-C-tenellus_contig114:9870..101701680789176.8798277-CDS-C-tenellus_contig114:9870..10170Choristocarpus tenellus KU2346CDSC-tenellus_contig114 9871..10170 +
1680789176.8907824-CDS-C-tenellus_contig114:10908..111541680789176.8907824-CDS-C-tenellus_contig114:10908..11154Choristocarpus tenellus KU2346CDSC-tenellus_contig114 10909..11154 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig114.5.1

>prot_C-tenellus_contig114.5.1 ID=prot_C-tenellus_contig114.5.1|Name=mRNA_C-tenellus_contig114.5.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=341bp
MPATPVPTSSLRGISAWGRSLPWNLRQTTGLVPSIARIDEVARGMRCASM
TGGEDVNLPVVQKIDFRITEHAILRNDDPQTVSFVTGSNRGIGLEISRQL
LSRTKGIVVAACRNPDQAEMLHHLHRLEGNKGRLDIVQMDVIDQSSIDEA
AEHVKSQHKRLDLLFNVAGILGDGKTTPGPERSLKAIDRDWLQQTLLVNA
IGPVMLTQAMAPLMLPGGGRRGGGHQGPTAPSVVINFSARVGSVTDNHLG
GWHSYRMSKAMLNMWTKGLSLELRRKGVWAISYHPGTTDTGLSEPFQKNV
RPEKLFTPAYTVGKLLDLVNSLEEEHSGGFYDFDGIRIPW*
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mRNA from alignment at C-tenellus_contig114:8188..11495+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig114.5.1 ID=mRNA_C-tenellus_contig114.5.1|Name=mRNA_C-tenellus_contig114.5.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3308bp|location=Sequence derived from alignment at C-tenellus_contig114:8188..11495+ (Choristocarpus tenellus KU2346)
GGTTTGAACATGGCTCAACCCACTCAATCTTTTTGTTTAACGACGACAAT ACAGGTCAAAGATAGGAGAGGCATTGGTAAGAAGATCGCGATATGCCTGC CACACCAGTCCCTACCTCTAGTTTGCGAGGCATTTCGGCCTGGGGAAGAT CATTGCCGTGGAATCTGCGCCAGACCACGGGACTCGTGCCGTCCATTGCC CGCATTGACGAGGTGGCACGGGGTATGCGGTGCGCTTCAATGACTGGAGG AGAAGATGTGAACCTGCCGGTAGTACAGAAGATAGACTTCCGAATCACGG AACACGCTATTCTACGAAATGATGACCCGCAAACTGTCTCCTTTGTAACA GGGTCCAACAGAGGCATAGGCCTTGAGATCTCACGCCAACTCCTCTCCAG GACGAAAGGTGAGCCCTGGTCACGATACGTGTAGGTAGTAATACATCGCT TGCGATGTTTCAAGGGAATGGAAAGGATCGACAGTGTGAATTTTGAGTGA GGCGTTGGATCCCTGGAAAGCGTGCTCCCAATGTTCTCCCGTCCTTAAGA TATTTTCTTCGAACGAACAAGTTTTCCCTATAGAAAGGTACCTGGAGTGA CTTAACATGTTTTCTTGGAGTTCAACTCTCTGAATACTCCAGGCATGGTG CATTATCATCTAGCCAAATTGCTACTGTACATCTCTCAGTGAGGAAGTTG ATATAGAGTTGTCTATTCCTCTTGGCATGCTAGATGTGTCTCTCAGTGAT TAGAGTTTGCAACAGTGTCACAAGTCCTACTTTGATTTTCGACCCCAGTG TCTTGCTGCCCTGCCATGTGAAGCTCTTATCTTGAGAGTTTTCGCACACT ATCAATGGCTCCGCTTGCTATTCCGGTATATGTTTTCTCCAAGCCCTCAC GCGCTTGCTGCTCCCCATTACATTCCACCACAATATCTTGGATTGACTTC ATCTTGCGTTGTACTACGGAGTGTATAATGTTCGATGTCTTCCACGTCCT TTACATCATCCCTGCTCCTACATGGTTGCTTGAGGTTCCCCTGGTCAGGT ATCGTGGTAGCCGCCTGCCGTAACCCTGACCAGGCGGAGATGTTGCACCA CCTACATCGTCTTGAGGGCAACAAGGGCAGACTTGACATTGTGCAGATGG ACGTAATCGACCAGTCTAGCATAGACGAGGCAGCAGAGCATGTCAAGAGT CAGCACAAGGTGGGTTTAAACGTCAAATAGATGCCAGCAAATACGCTGTT GGTGTGAGATTTGTCTATGCAAAATGGTGTGAATTGAGGTTGTGTTGATG GATGTTGTAGTGCTCAAGCTACTTCCAGTTGTACGTATGTATCTAGGTTA CACACGCACAGCAAAGTATTGTTATAGGCTAGTCCATTCCATAATTTCCT CCCACAGACAAATTCAGGCCTTCAAAAAACTTTCAATGCAGCTTGGCCTC TTAAATTACATGTCTGTGACCAACCAGTGGTGAGAATCGGTGACCTCACT GTTAGTATTAGGTCCTGACCAGAACTGCACTACATAACCAAAATTATTGT CCCCAAACCTGAACTTTGGTACTGTGTTATCCTCCTGTCTATGCTCCTCC CCCACTGGCATGGAATCCATGTATCTATGTGGGCAATGTTGCACTACTGA CGTGTTACCTACTACGGGATTGACTCTTCGCAGCGCTTGGACCTCCTCTT CAATGTGGCAGGGATTCTTGGGGATGGAAAAACCACCCCTGGACCAGAGC GATCTCTGAAAGCAATTGATCGTGACTGGCTACAGCAAACCCTTCTTGTT AATGCCATAGGTCCAGTGATGCTCACACAAGCCATGGCGCCCTTGATGCT GCCTGGCGGAGGAAGGAGGGGAGGAGGGCATCAAGGGCCTACGGCCCCTT CTGTTGTGATTAACTTCAGTGCACGAGTAGGCTCTGTGACAGACAACCAC TTAGGTGGCTGGCATTCGTACCGTATGTCCAAGGTGATACATGTAGACAG GTATCGCTAGTCTATTGAAAAGTGTGTTGGTGTGATCTTGCCTTTTGTTC CCACCCAATCTCTTCCTTTGATCAGGAGGCTATTACGTACCAATTGCTAA GACTAGTGAGAGCAGTTTCTCCTTGCCAAAGGCTCTATCATTACGTATTG CGTCCAAAATTTTTGGAGTGCTGTGTTTTTGGAGTCCAGCTTCTGTACTT GTACATATTTTTAGTGTTGTGACAATGGGCAACAGGGTTTCTTTCACACT GCGTGGTAGAGTAAAGAAGTAAATATCCTTGGTTGCCACAGACCTCTCCC TCTCTTTTCCCTTCTCCTGTTAGTAATATATTTATTGTGCAATTGAAAAC ATGCTGCTGTGACTGGCTGGCGAAATTGACTGCAGTTACGGCTGTCCTGT ATGAGTGTATGAGTGTATGAGTGTTTTGTCATGGTACAATTGATTGGATC ATTTTGATTGGATCATTTCTACACTTGATGTTGAACTGCAGCTTCTACAC TCTTCAATTCTCTATGTGGCAGAACAAAAGCCTTCTAAGCACTTCATACA CTCCAAGGATTTTTTTTTAAAATCTTATGATGTGTGAGAGGGGCCGCAGG GTCCACAGGGGGTGTTTAAAAAAAAAAAGACTTGAGTAAGAAGGAACACT GTTGCCACCCCTCTCTAATGTGACCCTTAATTGCAACCTCTTGCATCTCT CCCCACAACCACCTTGCACAGGCGATGCTCAATATGTGGACAAAGGGTTT GTCTCTGGAACTGCGGCGTAAGGGTGTATGGGCCATTTCGTACCACCCAG GAACCACTGATACAGGGCTCTCGGAGCCATTCCAGAAGAATGTCAGACCA GAAAAGCTGTTTACTCCAGCTTACACTGTGGGAAAGTTGCTGGACCTTGT CAACTCCCTAGAAGAGGAGCACTCAGGAGGGTTCTATGACTTTGATGGGA TAAGGATTCCTTGGTAGCACCTTTGTAGAGCTCTAGCTAGGTATCATCGC CAGATTTTTTTTATCATTGGATCATAGTTCTGTCATAGTTCTGTCCTCCA GTTCGATACCTTATATTGTCGGAGGCCTATCCTATCTCATGTGATGGTGT TAGCTGGTCTTGATGACCTTGTTGGAAACGTGGTTGCTCCTCTGCGTGTG TTGCGTCCTTCACATCCAGAGCAGAAGTTGAAGGATGATATTATAAGACG ATATTTGATATCCTTAGCAGTTTTTATTTTTATTTTTTCAGTGAACTGGA TTTTGTGTAAGATTTCTGAAGTGTACATCAATAAATAATATAAAAAGAAA AGCAGAAC
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Coding sequence (CDS) from alignment at C-tenellus_contig114:8188..11495+

>mRNA_C-tenellus_contig114.5.1 ID=mRNA_C-tenellus_contig114.5.1|Name=mRNA_C-tenellus_contig114.5.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1023bp|location=Sequence derived from alignment at C-tenellus_contig114:8188..11495+ (Choristocarpus tenellus KU2346)
ATGCCTGCCACACCAGTCCCTACCTCTAGTTTGCGAGGCATTTCGGCCTG
GGGAAGATCATTGCCGTGGAATCTGCGCCAGACCACGGGACTCGTGCCGT
CCATTGCCCGCATTGACGAGGTGGCACGGGGTATGCGGTGCGCTTCAATG
ACTGGAGGAGAAGATGTGAACCTGCCGGTAGTACAGAAGATAGACTTCCG
AATCACGGAACACGCTATTCTACGAAATGATGACCCGCAAACTGTCTCCT
TTGTAACAGGGTCCAACAGAGGCATAGGCCTTGAGATCTCACGCCAACTC
CTCTCCAGGACGAAAGGTATCGTGGTAGCCGCCTGCCGTAACCCTGACCA
GGCGGAGATGTTGCACCACCTACATCGTCTTGAGGGCAACAAGGGCAGAC
TTGACATTGTGCAGATGGACGTAATCGACCAGTCTAGCATAGACGAGGCA
GCAGAGCATGTCAAGAGTCAGCACAAGCGCTTGGACCTCCTCTTCAATGT
GGCAGGGATTCTTGGGGATGGAAAAACCACCCCTGGACCAGAGCGATCTC
TGAAAGCAATTGATCGTGACTGGCTACAGCAAACCCTTCTTGTTAATGCC
ATAGGTCCAGTGATGCTCACACAAGCCATGGCGCCCTTGATGCTGCCTGG
CGGAGGAAGGAGGGGAGGAGGGCATCAAGGGCCTACGGCCCCTTCTGTTG
TGATTAACTTCAGTGCACGAGTAGGCTCTGTGACAGACAACCACTTAGGT
GGCTGGCATTCGTACCGTATGTCCAAGGCGATGCTCAATATGTGGACAAA
GGGTTTGTCTCTGGAACTGCGGCGTAAGGGTGTATGGGCCATTTCGTACC
ACCCAGGAACCACTGATACAGGGCTCTCGGAGCCATTCCAGAAGAATGTC
AGACCAGAAAAGCTGTTTACTCCAGCTTACACTGTGGGAAAGTTGCTGGA
CCTTGTCAACTCCCTAGAAGAGGAGCACTCAGGAGGGTTCTATGACTTTG
ATGGGATAAGGATTCCTTGGTAG
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