|
Homology
BLAST of mRNA_C-tenellus_contig1136.1.2 vs. uniprot
Match: D7G9D8_ECTSI (MutL protein homolog 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9D8_ECTSI) HSP 1 Score: 244 bits (623), Expect = 6.810e-62 Identity = 139/256 (54.30%), Postives = 174/256 (67.97%), Query Frame = 2
Query: 2156 LLEDFVEADPYDSCGVSNPGG--IHASQG-----AVHLLGTGLDNMPGKIHLGMQGTTDRKAERPIAGVTEASRNELKAGAGAVAITLTPEELDRAQVIGQAGRKFILLRAMTGAVLCVDQHAADERVKLEDLERQVYGPARNERNVKKFALNPAEVSPLTRTDAELVEQHRKVLVSWNFDIEVEETI----GMSFPQAKLHSVPEVCGVRLSMQDLFGFLHHLRERVEPGAKATGVRPPQIQHILNYKACHSAIR 2890
+L F+ YDSC VS+ GG +++ QG A G P K + ER I V +A ++E+ AGAGAVA+T+TPEEL A +IGQAGRKFILLRA TGAVLC+DQHAADERVKLE+LERQV+G R RNV++ L+P E +TR+DAEL+E+HR+VL SW F++ V++ G++ P L +VP VCGVRLS+QD GFLH LRE VEPG A +RPPQ+QHILNYKACHSAIR
Sbjct: 1310 VLGKFLATGDYDSCHVSDAGGAAVYSPQGPGGDRARKAGGEAEKAAPEKDS--RYNPLPGRRERQIPQVLQAGQDEVGAGAGAVAVTVTPEELSEALLIGQAGRKFILLRAKTGAVLCLDQHAADERVKLEELERQVFGEGRERRNVERLLLDPPEKLSITRSDAELLEEHREVLSSWQFEVRVDQAQQGGDGLT-PVVTLTAVPMVCGVRLSVQDFVGFLHFLRESVEPGQSARRLRPPQVQHILNYKACHSAIR 1562
BLAST of mRNA_C-tenellus_contig1136.1.2 vs. uniprot
Match: A0A6H5JXH6_9PHAE (MutL_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXH6_9PHAE) HSP 1 Score: 135 bits (339), Expect = 2.560e-32 Identity = 68/121 (56.20%), Postives = 88/121 (72.73%), Query Frame = 2
Query: 2540 QVYGPARNERNVKKFALNPAEVSPLTRTDAELVEQHRKVLVSWNFDIEVEETI----GMSFPQAKLHSVPEVCGVRLSMQDLFGFLHHLRERVEPGAKATGVRPPQIQHILNYKACHSAIR 2890
+V+G R RNV++ L+P E +TR+DAEL+E+HR+VL SW F++ V++ G++ P L +VP VCGVRLS+QD GFLH LRE VEPG A +RPPQ+QHILNYKACHSAIR
Sbjct: 15 KVFGETRERRNVERLLLDPPEKLSITRSDAELLEEHREVLSSWRFEVRVDQGQQGGDGLT-PVVTLTAVPMVCGVRLSVQDFVGFLHFLRESVEPGQSARRLRPPQVQHILNYKACHSAIR 134
BLAST of mRNA_C-tenellus_contig1136.1.2 vs. uniprot
Match: A0A662XGW8_9STRA (MutL_C domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XGW8_9STRA) HSP 1 Score: 134 bits (338), Expect = 1.670e-31 Identity = 89/234 (38.03%), Postives = 119/234 (50.85%), Query Frame = 2
Query: 2390 ITLTPEELDRAQVIGQAGRKFILLRAMT---GAVLCVDQHAADERVKLEDLERQVYGPARNERNVKKFALNPAEVSPLTRTDAELVEQHRKVLVSWNFDIEV----EETIGMSFPQAK---------LHSVPEVCGVRLSMQDLFGFLHHLRERVEPGAKATG-------VRPPQIQHILNYKACHSAIRFGDLLTNLECVELMSRLATCKLPFFCAHGRPSVVPLCVLGEQVG 3022
+ ++ L QVI Q RKFIL +A T +LC+DQHAADERV+LE LE V+GP ++RNV P + + + E + + ++ SW FD E E+ +S P LHS P+V + D FL H+ TG +RPP I +L+ +AC SAI FGD L+ +C L+ L TC+LPF CAHGRPSVVPL L G
Sbjct: 19 VKISKSVLATLQVIRQVDRKFILAKASTPRGSLLLCIDQHAADERVRLESLEAAVFGPDGSQRNVDFHEHEPPLILLMNAKERETLWGNEDLVRSWGFDFECVSCHSESSFLSDPNTPEQNREGHVLLHSTPKVEKRIANADDFREFLRHIA--------CTGGYSGYSYIRPPVITRLLHSRACRSAIMFGDWLSVGQCKALVEELKTCQLPFQCAHGRPSVVPLAELNASCG 244
BLAST of mRNA_C-tenellus_contig1136.1.2 vs. uniprot
Match: A0A7S4ULW0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4ULW0_9EUKA) HSP 1 Score: 133 bits (334), Expect = 1.360e-30 Identity = 85/231 (36.80%), Postives = 121/231 (52.38%), Query Frame = 2
Query: 2318 AERPIAGVTEASRNELKAGAGAVAITLTPEELDRAQVIGQAGRKFILLRAMTGAVLCVDQHAADERVKLEDLERQVYGPARNERNVKKFALNPAEVSPLTRTDAELVEQHRKVLVSWNFDIEVEETIGMSFPQAKLHSVPEVCGVRLSMQDLFGFLHHLRERVEPGAKATGVRPPQIQHILNYKACHSAIRFGDLLTNLECVELMSRLATCKLPFFCAHGRPSVVPLCVLG 3010
+++PI + + R +G TLT E L +VI Q +KF+L + + +L VDQHAADERV+ E LE Q++G +RN++ L+ + + + L+E+ R L SW + ++ L SVP+V V L QD FL +E + +RP +I IL KAC SAI FGD L +C ELM L+ C+ PF C HGRPSV P+ LG
Sbjct: 57 SQQPILELMDNVRRGFGSGLFKTDFTLTKEMLKSVEVINQMDQKFLLCK-IGDILLAVDQHAADERVRYEKLEDQIFGECGQKRNLQVEFLSHSISLDMNEHERYLLERFRACLESWGWSFSDLQS------NVSLFSVPKVMNVVLDHQD---FLKQFLSELEQSGGSRYLRPQKITKILQSKACRSAIMFGDTLDLQQCEELMKNLSNCRAPFTCCHGRPSVYPILDLG 277
BLAST of mRNA_C-tenellus_contig1136.1.2 vs. uniprot
Match: A0A662X288_9STRA (MutL_C domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X288_9STRA) HSP 1 Score: 136 bits (342), Expect = 5.900e-30 Identity = 95/255 (37.25%), Postives = 130/255 (50.98%), Query Frame = 2
Query: 2306 TDRKAERPIAGVTEASRNELKAGAGAVAITLTPEELDRAQVIGQAGRKFILLRAMT---GAVLCVDQHAADERVKLEDLERQVYGPARNERNVKKFALNPAEVSPLTRTDAELVEQHRKVLVSWNFDIE-VEETIGMSF------PQAK------LHSVPEVCGVRLSMQDLFGFLHHLRERVEPGAKATGVRPPQIQHILNYKACHSAIRFGDLLTNLECVELMSRLATCKLPFFCAHGRPSVVPLCVLGEQVG 3022
T + E A + S +LK G + ++ L QVI Q RKFIL++A T +LC+DQHAADERV+LE LE V+GP ++RNV PA + + + E + + ++ SW FD E V SF P+ LHS P+V + D FL H+ + + +RPP I +L+ +AC SAI FGD L+ +C L+ L TC+LPF CAHGRPSVVPL G
Sbjct: 228 TPARVEEMAAALRVGSVRDLK---GLREVKISKSVLATLQVIRQVDRKFILVKASTPRGSLLLCIDQHAADERVRLESLEAAVFGPDGSQRNVDFHEHQPALILLMNAKERETLWGNEDLVRSWGFDFECVSSQSENSFLSDRKTPEKNGEGHVLLHSTPKVEKRIANADDFREFLRHIAG-TGGYSGCSHIRPPVITRLLHSRACRSAIMFGDWLSIGQCKALVEELKTCQLPFQCAHGRPSVVPLAEFNGSSG 478
BLAST of mRNA_C-tenellus_contig1136.1.2 vs. uniprot
Match: A0A0G4IZC4_PLABS (MutL_C domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IZC4_PLABS) HSP 1 Score: 134 bits (337), Expect = 1.100e-28 Identity = 83/208 (39.90%), Postives = 120/208 (57.69%), Query Frame = 2
Query: 2399 TPEELDR-----AQVIGQAGRKFILLRAMTGAVLCVDQHAADERVKLEDLERQVYGPARNERNV-KKFALNPAEVSPLTRTDAELVEQHRKVLVSWNFDIEVEETIGMSFPQAKLHSVPEVCGVRLSMQDLFGFLHHLRERVEPGAKATGVRPPQIQHILNYKACHSAIRFGDLLTNLECVELMSRLATCKLPFFCAHGRPSVVPLCV 3004
TP LDR A+V+ Q KFI+ AV+ +DQHAADERV+LE LE ++ AR ++ + ++PA + D +L+EQ + + W F + +G+ A L VP + G RL+ +DL G++ L ++G PP+++ +L KAC SAI FGD+L+ +C L+ RLATCK PF CAHGRPSVVPL +
Sbjct: 398 TPVALDRSMLVNARVLRQVDSKFIVAVVDGNAVIVIDQHAADERVRLEQLEHEM--EARRQKAILTTMTVSPAVTLAWSSGDLDLLEQVKDRIEEWGFQV-----VGLQGRFA-LRRVPVIFGERLTSEDLLGYVRSLH--------SSGTVPPRLKSVLASKACRSAIMFGDVLSVEQCGALVGRLATCKFPFQCAHGRPSVVPLAI 589
BLAST of mRNA_C-tenellus_contig1136.1.2 vs. uniprot
Match: A0A3L6VLX3_9STRA (MutL_C domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VLX3_9STRA) HSP 1 Score: 122 bits (306), Expect = 1.190e-27 Identity = 79/206 (38.35%), Postives = 107/206 (51.94%), Query Frame = 2
Query: 2384 VAITLTPEELDRAQVIGQAGRKFILLRAMTGAVL-CVDQHAADERVKLEDLERQVYGPARNERNVKKFALNPAEVSPLTRTDAELVEQHRKVLVSWNFDIEVEETIGMSFPQAKLHSVPEVCGVRLSMQDLFGFLHHLRERVEPGAKATGVRPPQIQHILNYKACHSAIRFGDLLTNLECVELMSRLATCKLPFFCAHGRPSVVPL 2998
VAI L L V+ Q KFIL++ +L C+DQHAADERVKLE LE A R+ L+ + V L + ++V H + W F++ + + + L VP V + D F +LH L P +RPP I L+ +AC SAI FGD LT EC L+ +L+TC+LPF CAHGRPS++PL
Sbjct: 18 VAIQLPASMLQHLDVLQQVDNKFILVQCKAPLLLLCIDQHAADERVKLEALENAHLSAAFPSRS-----LDKSHVLELNDIEKQVVRCHGDSIRHWGFEVVEDGDVD----KWSLARVPVVDHREATCDDFFEYLHLLATMAAPT-----LRPPAITRFLHSRACRSAIMFGDPLTREECQTLIRQLSTCRLPFQCAHGRPSIIPL 209
BLAST of mRNA_C-tenellus_contig1136.1.2 vs. uniprot
Match: W2G1M6_PHYPR (MutL_C domain-containing protein n=2 Tax=Phytophthora parasitica TaxID=4792 RepID=W2G1M6_PHYPR) HSP 1 Score: 126 bits (317), Expect = 2.860e-27 Identity = 81/218 (37.16%), Postives = 122/218 (55.96%), Query Frame = 2
Query: 2390 ITLTPEELDRAQVIGQAGRKFILLRAMTGA---VLCVDQHAADERVKLEDLERQVYGPARNERNVKKFALNPAEVSPLTRTDAELVEQHRKVLVSWNFDIEV---EETIGMSFPQAK---------LHSVPEVCGVRLSMQDLFGFLHHLRERVEPGAKATGVRPPQIQHILNYKACHSAIRFGDLLTNLECVELMSRLATCKLPFFCAHGRPSVVPL 2998
I ++ L + QV+ Q RKFIL++A T VLC+DQHAADER++LE LE +++G + R V+ P V + + E+++Q+ ++ SW FD E E + +S + L++ P+V + D F+ L E + + +RPP I +L+ +AC SAI FGD L+ +C +L+ L TC+LPF CAHGRPSVVPL
Sbjct: 180 IKVSKSTLAKLQVVRQVDRKFILVQADTSRGKLVLCIDQHAADERIRLEQLEEEMFGRDGSLRRVEIQKHGPPLVLRVNFKEREVLKQYEGLIKSWGFDFESVTSEPELFISMHRKSELDDKTRVLLYATPKVEKRAANADDFREFIQLLASAGETYSHSQ-IRPPVITRLLHSRACRSAIMFGDHLSLGQCRDLIEDLKTCQLPFQCAHGRPSVVPL 396
BLAST of mRNA_C-tenellus_contig1136.1.2 vs. uniprot
Match: A0A5D6YA94_9STRA (MutL_C domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YA94_9STRA) HSP 1 Score: 124 bits (311), Expect = 1.470e-26 Identity = 81/222 (36.49%), Postives = 111/222 (50.00%), Query Frame = 2
Query: 2411 LDRAQVIGQAGRKFILLRAMTGA----VLCVDQHAADERVKLEDLERQVYGPARNERNVKKFALNPAEVSPLTRTDAELVEQHRKVLVSWNFDIEVEETIGMSFP----------------------QAKLHSVPEVCGVRLSMQDLFGFLHHLRERVEPGAKATGVRPPQIQHILNYKACHSAIRFGDLLTNLECVELMSRLATCKLPFFCAHGRPSVVPL 2998
L + +VI Q RKFIL R + + +LC+DQHAADERVKLE LE +++GP NE N++ ++ L +A + H ++ +W FD E S +L + P+V + D F+ L E T +RPP I +L+ +AC SAI FGD L+ +C EL+ L CKLPF CAHGRPSVVPL
Sbjct: 171 LSKLEVIRQVDRKFILARVVDESAGSLLLCIDQHAADERVKLEQLELKMFGPDGNELNIEVSTYARPQLLLLNAAEANALNLHEDIVRAWGFDFAFVEYASESARVRDGLCLGALATRVHAGAENGVYVELRTTPKVDTRCANADDFREFIRILSPH-ESYWSWTVMRPPVITRLLHSRACRSAIMFGDYLSVSQCQELVEDLRECKLPFQCAHGRPSVVPL 391
BLAST of mRNA_C-tenellus_contig1136.1.2 vs. uniprot
Match: A0A329SZP8_9STRA (MutL_C domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SZP8_9STRA) HSP 1 Score: 127 bits (320), Expect = 4.430e-26 Identity = 83/228 (36.40%), Postives = 122/228 (53.51%), Query Frame = 2
Query: 2390 ITLTPEELDRAQVIGQAGRKFILLRAMT---GAVLCVDQHAADERVKLEDLERQVYGPARNERNVKKFALNPAEVSPLTRTDAELVEQHRKVLVSWNFDIE---------VEETIGMSFPQAKLHSVPEVCGVRLSMQDLFGFLHHLRERVEPGAKATGVRPPQIQHILNYKACHSAIRFGDLLTNLECVELMSRLATCKLPFFCAHGRPSVVPLCVLGEQVGGHDLK 3037
I ++ L + QVI Q RKFIL+RA T VLC+DQHAADERV+LE LE +++G + R V+ P V + + E++ + ++ SW F E ++ + + L++ P+V + D F+ L R + +RPP I +L+ +AC SAI FGD L+ +C +L+ L TC+LPF CAHGRPSVVPL ++ DLK
Sbjct: 677 IKISKSTLAKLQVIRQVDRKFILVRAETLRGKLVLCIDQHAADERVRLEQLEEEMFGHDGSLRRVEIQEHEPPLVLRMNFKEREVLNHYEDLIRSWGFGFESITSEPESIFRKSGSVDKYRVLLYATPKVEKKAANADDFRDFIQFL-SRTGKSYPHSRIRPPVITRLLHSRACRSAIMFGDHLSLGQCRDLIEDLKTCQLPFQCAHGRPSVVPLA----EIHNADLK 899
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Stop | 1 |
Start | 1 |
Seed ortholog | 2880.D7G9D8 |
Preferred name | MLH3 |
PFAMs | DNA_mis_repair,HATPase_c,HATPase_c_3,MutL_C |
Model size | 3906 |
Max annot lvl | 2759|Eukaryota |
KEGG ko | ko:K08739 |
KEGG Pathway | ko03430,map03430 |
Hectar predicted targeting category | other localisation |
GOs | GO:0000003,GO:0000228,GO:0000280,GO:0000793,GO:0000794,GO:0000795,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003696,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005712,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007127,GO:0007131,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022402,GO:0022414,GO:0031974,GO:0031981,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0035825,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0046483,GO:0048285,GO:0050896,GO:0051321,GO:0051716,GO:0061982,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0099086,GO:0140013,GO:1901360,GO:1901363,GO:1903046,GO:1990391,GO:1990837 |
Exons | 7 |
Evalue | 9.71e-64 |
EggNOG OGs | COG0323@1|root,KOG1977@2759|Eukaryota |
Description | mismatched DNA binding |
Cds size | 2928 |
COG category | L |
BRITE | ko00000,ko00001,ko03400 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1680789174.8966897-UTR-C-tenellus_contig1136:7101..7967 | 1680789174.8966897-UTR-C-tenellus_contig1136:7101..7967 | Choristocarpus tenellus KU2346 | UTR | C-tenellus_contig1136 7102..7967 - |
1680789174.979996-UTR-C-tenellus_contig1136:14412..14524 | 1680789174.979996-UTR-C-tenellus_contig1136:14412..14524 | Choristocarpus tenellus KU2346 | UTR | C-tenellus_contig1136 14413..14524 - |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1680789174.9092712-CDS-C-tenellus_contig1136:7967..8118 | 1680789174.9092712-CDS-C-tenellus_contig1136:7967..8118 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig1136 7968..8118 - |
1680789174.9202743-CDS-C-tenellus_contig1136:8688..8810 | 1680789174.9202743-CDS-C-tenellus_contig1136:8688..8810 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig1136 8689..8810 - |
1680789174.9301002-CDS-C-tenellus_contig1136:9141..9255 | 1680789174.9301002-CDS-C-tenellus_contig1136:9141..9255 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig1136 9142..9255 - |
1680789174.937957-CDS-C-tenellus_contig1136:9721..9832 | 1680789174.937957-CDS-C-tenellus_contig1136:9721..9832 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig1136 9722..9832 - |
1680789174.951377-CDS-C-tenellus_contig1136:10406..10511 | 1680789174.951377-CDS-C-tenellus_contig1136:10406..10511 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig1136 10407..10511 - |
1680789174.9595811-CDS-C-tenellus_contig1136:10815..11059 | 1680789174.9595811-CDS-C-tenellus_contig1136:10815..11059 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig1136 10816..11059 - |
1680789174.9692779-CDS-C-tenellus_contig1136:12331..14412 | 1680789174.9692779-CDS-C-tenellus_contig1136:12331..14412 | Choristocarpus tenellus KU2346 | CDS | C-tenellus_contig1136 12332..14412 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1136.1.2 >prot_C-tenellus_contig1136.1.2 ID=prot_C-tenellus_contig1136.1.2|Name=mRNA_C-tenellus_contig1136.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=976bp
MNVLQGQQNEYPADRYSSPILPKYRSPEHLSSRGWRLNGGRHLSQEDHPQ VLRSRTDTSQVRHTRQVRKREWRQGSQKLSTQNSPALFSGGDCTGDWNEE SSEVARGGDSDSLTCLFNYAFPEKRDRSHRDQLAGKCVSHGNTTKGLVVG LGNGTGIDTRIGKKRDHGKWGSRPPPVPSLMARRRFNYQRRTVRCRGLGV TVTRPPSPSFSFLVKEVTSVAKSKSEEGPGTQINTPSRDPEEERTDERSS TVENGGEQGLAPLRESPTRSQLRTTGATSCSSPLRSTSTNPSLHEVGDLA NGSLSLPGVHPLESEDCQRDTPQLCSSLGESLPHTSDVDGLRQPPARGCK RQRVVGPTSTAANTGDITVAATTAATTPTKAQSCSAFIPISGANSCSYSL DEDCTKDNNISSQKGKRVAGNKDSEREGDADRYGEAALGSDLHNGSSQSR KKTGWEKERRRVSQIEGSAPWRVKECLSKYNARGLFIDEKAQRKPEVWQE GFRDVDRSVNEVDGTVWNKIELILGQNCEQKQEAGKSSGTVLKNIDHRVE TVPRTVGQTGTCTLDDDSKVRGRDFGKSEQIVLRPTEDNEENNEVEPLDI NSAPVLEAADKGQESNGMSELCNQSEQDELGNAKARDNAGSTSVGSSFYV AESGEGVQGKASDNDDEVGSNLDGENFAGGDLLEDFVEADPYDSCGVSNP GGIHASQGAVHLLGTGLDNMPGKIHLGMQGTTDRKAERPIAGVTEASRNE LKAGAGAVAITLTPEELDRAQVIGQAGRKFILLRAMTGAVLCVDQHAADE RVKLEDLERQVYGPARNERNVKKFALNPAEVSPLTRTDAELVEQHRKVLV SWNFDIEVEETIGMSFPQAKLHSVPEVCGVRLSMQDLFGFLHHLRERVEP GAKATGVRPPQIQHILNYKACHSAIRFGDLLTNLECVELMSRLATCKLPF FCAHGRPSVVPLCVLGEQVGGHDLK* back to topmRNA from alignment at C-tenellus_contig1136:7102..14524- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-tenellus_contig1136.1.2 ID=mRNA_C-tenellus_contig1136.1.2|Name=mRNA_C-tenellus_contig1136.1.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=7423bp|location=Sequence derived from alignment at C-tenellus_contig1136:7102..14524- (Choristocarpus tenellus KU2346) GGATGGAGGGGGGGGCAGTGAACTTGATGGTGATGAAAATAGTCCTCAAA
GATTGGAAGGGAGGACATGGGACCTTGGCAATGGCAAGCTAATTGGGCAG
GTACGTAAGCCCATGAACGTGCTACAAGGCCAGCAGAATGAGTACCCTGC
AGACCGGTATTCGAGTCCTATCCTACCCAAGTACAGGTCACCAGAGCATT
TGTCTAGTAGGGGATGGAGGCTGAATGGGGGAAGACATCTATCACAGGAG
GACCATCCTCAGGTGTTACGCAGTCGTACAGATACGTCACAGGTCAGACA
CACACGTCAAGTACGGAAGCGAGAGTGGAGACAGGGTAGTCAGAAATTAT
CTACTCAGAATTCTCCTGCCTTGTTCAGTGGGGGAGACTGTACAGGGGAC
TGGAATGAAGAGTCATCAGAGGTGGCAAGAGGTGGTGACAGTGATTCCCT
GACCTGCCTATTCAATTACGCCTTTCCAGAGAAGAGGGATAGATCTCATC
GTGATCAGCTGGCAGGAAAATGTGTATCTCATGGTAATACCACAAAGGGA
TTGGTAGTGGGTCTAGGTAATGGCACCGGGATCGATACAAGGATTGGCAA
GAAGCGTGATCATGGTAAATGGGGATCACGTCCCCCACCAGTGCCCTCCC
TTATGGCAAGAAGGCGATTCAATTACCAGCGTCGAACTGTTCGGTGCAGG
GGCCTGGGGGTGACTGTGACAAGACCACCTAGCCCATCCTTCAGCTTCCT
GGTAAAGGAGGTTACCAGTGTTGCTAAAAGCAAAAGTGAGGAAGGCCCTG
GTACCCAAATCAACACACCCTCACGTGATCCAGAAGAGGAGAGGACTGAC
GAAAGAAGTAGTACAGTTGAGAACGGTGGAGAGCAGGGATTAGCCCCTCT
ACGTGAGAGTCCAACAAGGAGCCAGTTGAGAACGACAGGTGCCACCAGCT
GCTCTTCTCCTCTAAGGTCAACCTCAACCAATCCTTCATTGCATGAGGTT
GGAGATCTTGCCAATGGTTCATTGTCTCTGCCAGGAGTCCATCCATTGGA
GAGTGAGGACTGCCAAAGAGACACCCCTCAACTATGCTCATCACTTGGAG
AGTCCCTCCCACATACTAGTGATGTGGACGGACTGAGGCAGCCACCTGCC
AGAGGTTGCAAGCGCCAAAGAGTGGTTGGGCCCACCTCGACAGCTGCCAA
CACAGGTGACATCACTGTTGCAGCCACCACCGCAGCCACTACACCAACCA
AAGCACAATCCTGTAGCGCATTCATTCCCATTAGTGGTGCAAATAGTTGC
TCTTATTCTCTGGATGAAGACTGCACAAAGGATAATAATATTAGTTCACA
GAAAGGGAAAAGAGTTGCAGGGAATAAAGATTCAGAACGGGAGGGAGATG
CAGACCGGTATGGTGAAGCTGCGCTTGGTTCAGATCTCCACAATGGTTCT
TCCCAGTCGAGGAAGAAAACTGGTTGGGAAAAGGAGAGAAGAAGGGTATC
TCAAATAGAGGGTAGTGCACCATGGAGGGTTAAGGAATGCCTCAGCAAAT
ACAATGCTCGTGGCCTGTTTATTGATGAGAAGGCACAAAGGAAACCTGAG
GTTTGGCAGGAGGGCTTCAGGGATGTGGATAGATCTGTAAATGAGGTAGA
TGGAACGGTTTGGAACAAAATAGAGTTAATTCTGGGGCAAAATTGTGAAC
AGAAGCAAGAGGCCGGCAAGTCATCAGGAACTGTGTTGAAAAACATTGAT
CATAGGGTGGAGACTGTCCCTAGAACTGTTGGGCAAACAGGCACTTGCAC
TTTGGATGATGATTCGAAAGTTAGAGGACGTGACTTTGGCAAATCTGAGC
AAATAGTGTTGAGACCTACAGAGGACAACGAGGAGAATAATGAAGTGGAG
CCTCTTGACATAAACAGTGCACCAGTACTTGAGGCTGCAGACAAGGGTCA
GGAAAGCAATGGCATGAGCGAGCTCTGCAATCAATCTGAACAGGATGAAC
TTGGTAATGCCAAGGCCAGAGACAATGCTGGTAGCACCAGTGTTGGCAGC
AGCTTCTATGTAGCTGAGTCAGGCGAAGGTGTTCAAGGCAAGGCTAGTGA
CAATGATGATGAAGTAGGTTCCAACCTGGATGGAGAAAATTTTGCTGGAG
GGGATCTGTTGGAGGACTTTGTGGAAGCAGACCCATACGACAGGTGCTAT
GCCATTGCTCTGAATGTATTGTAGAAGGTCAATTCTTGACCGATCGTAGA
CAATCCCTTATATGCCTGGTCCAATGGTCCAGAGTAGCCCACAACTGAGA
TTGAATTATTTGTGGATACATGATCAATGTTAATGAAGTTGGGTGTGTGA
AGCAAAAGGTCGTCATAAACCCCTCTCTCGACTTGTACTCAAAGTTGATC
CCTACTGTGCACCAGCCAGGTTTACTCTTAAGAACTGAACTACTACACAA
GCCTTGACAAACCCACCCCCTACCTACAACCGATGGCAAGTGTGTTGGAG
CCTAAGAAACCCCTGAGCTACTGAAAAGTTGTCAGCACTGACTACTTTCC
TGGGGCTAAGGTTTGCTGAAGTTTCAACAAAGGCTAATCCCAGGGTTCAC
CAGCTATTAGGCTTGATTAGGTTTCGTGCAAGGGTTGCTATCCTTCTAAT
CAGGGAGCTGACTACTTTCCAGTAGCTTAGAGGTCCGCTGAAGTTTCAAG
CAAACGTGAACCTCATGGGTTCAATCCCAATCATGGTTACACATCTGCCA
AAAGGCTAACACACCGCCAGGATACACAACCACACTTTAGTAACTGCCCC
ACCAAGAAAGGTAGTCCTGATTAGAGGGATAGCAGCTCTTGAGTGAAATC
TGTTCAAACCTGGCAGCTTGCAAACCCCAGGATTGGCTTTTATTGAAACT
TAAGTAACCCCTGAGCCCCGGGAAAGTAGTCAGCGCTGATGATATTCTGG
TAGCCCAGGGGTTTACTCTAGTTTCAAGAACGTGTGTTGTAACATTTGTT
CTGTAGCTCCACTTTCTTCCCCGTTTTCCACAGGCTGGCCTTCATACCCA
ACTTTCTTCTCACATTATAATGAAGGTTCTACTCTTGCTCACTACCGAAC
ATAGCATTAGTAGCTAAACAGGTTTTTAACAACTAATGATGGAAGTACAG
TCAATGAGCATAAAATGGTCAAACTCTTTAGTGGCGATTTTTCCTTGTCA
AGTGTACCAATGCGTGCTGATTGGGAAGAACATGAATGTAGTATGTTCTG
AGTATCCCACTTGTTGTGGTGTTCGCTGTGCATGGTAGTGTGAGACTAGT
TGACAATTGTTGTGACTGTGGTTTCATTTTCATTCAATCCGTATGTATGT
GCTACTGCAGCAATTCTATCATCTTGACCCTTAAACATCCCAACCCTTCA
AAGCTATGTATCTAGTTTTCTTATGGTAATTGCCCCGACCTTGACTCAAC
CAATGCAATAAACAGCTGTGGCGTATCAAATCCTGGAGGCATTCACGCAT
CCCAAGGAGCTGTTCATCTGCTTGGTACAGGACTTGACAACATGCCAGGG
AAGATTCACCTTGGCATGCAAGGGACTACAGATCGCAAGGCGGAACGCCC
AATCGCAGGTGTGACTGAGGCAAGTCGTAACGAGCTGAAGGCTGGAGCTG
GGGCTGTGGCGATCACTTTGACTCCAGAAGAGCTGGATAGGGCGCAAGTG
ATAGGGCAGGTGAGCTTGTGGGGTGGAAATTATGCCAGGTTTCCCTTATG
TGACAATGCAGAATGTTGATATTTGCTAATTATTCTTTTGTTCTCATGTA
TGGACTTGTCTCACTAAAGAAGTTGACATGTGATCTGCTCAAAAGAATGC
CCCTTCCTCCCATTTATGAACATCTATAATCCACTTCACACAAGTCTAAC
TTTAATGACGACCACTGCCAGATAAGTTTCCCAGTTATTCAGGCCATGAA
TGCTTCAGAGTTTCAGCACACAAAATTTCTGAGCAGTCCACCTACCCAAT
GCCTGGTTCCTAGGCAGGGCGCAAGTTCATTCTGCTGCGTGCCATGACAG
GAGCAGTACTTTGCGTAGATCAGCATGCTGCAGATGAAAGGGTGAAACTT
GAGGACTTGGAGAGGCAGGTGAGGATGCATGTGATTCATTGTACTAATGA
CTCAGGTTTCAGTTCGCCATTGAGGTATGCCAAGATTAGCACAACCAAGT
TGAAAGGTTAAAAGATTGGAAACATCCTATTGACTCATTTCTTTTCTTGT
GATCAATCTTGACATGACTTACTTGTTTTCCATTTGTACCTGGTATGCAT
TAAAGGTAAAATTATTTGAAGAGTGTCCAATCTCAGTATCCTGTGAGTGG
CGTATACTTTTAAACTTTTCCTTGCCATTATTTAGCCCACTCTCAATAGG
TTTTTTTATCATCAGCGAACATAGCGAAGCCAAGTGAACTGCAGCATTTT
CGGCTGGACTGGTGTTATGATATTGACCAGCCCAGAAGCCTTACGCGTAC
ACCCACCTCTGGACAGCATTCATCCTACATGTCAAGCTTCATCATGAATC
TGAGAAATGCCCCAACAGATACTGTTTCCTAGTAGAGACACTATCCTTCT
CAAATATGAAGAACTCCAATAATACACTCAAAGATTCTCTCAAGCACCGA
TATTATCCATGGAAATGGTTATCTCGACTTCAACACTCCCAGGTTTATGG
GCCAGCGCGAAATGAAAGGAACGTAAAGAAGTTTGCCTTAAATCCTGCAG
AAGTTTCACCACTCACTCGCACTGATGCTGAGCTTGTCGAGCAGCACCGC
AAAGTGGGTAATCAGTGCATTGATTTGGGGTGTGAACTCCTGTTTGATAG
AATTTGGTGGCTCAGTGGTGATGGAGTGTTAGTATCAAGGGTTGCTTTAA
CATGACTTGAACTGACAAGCATAGCAGCAAGTGGCCTTCACCCTTGTTTT
GAAATGGTGCTGTTAGAGCAGTAGTGTTGGATTTGGTACCCTTCACGATG
ATGTGACCCGCTTGTTCATTTGTTACCGCAGAGTATTTATTGCACAGGTA
TTGCACATGTTCACACCTGAAGACACGGTCTTCGCATGAACCAAGTAAGA
ATCACAAGGGGATGGCTATGGTCTGAACTTGTCAAGGTCTCACTCACGCT
GTACTGTAGGTCTACCTGATTGGTGTCTAGTACGATTTTTTTGGTATGTG
TCTGCCCACGCAAGTGCCTGTGCATGGGATCCATGTTGGTCATCCCATCA
ATTTGCCGTGACATACCAGGTGCTGGTCTCGTGGAACTTTGATATTGAGG
TGGAGGAAACAATTGGCATGTCCTTCCCACAGGCCAAGCTTCACTCTGTG
CCTGAGGTGTGCGGAGTGCGTTTGTCAATGCAGGTGTGCATGTATGTGTT
TCTGAGTGTTCCACATTTCCTTGTAGCAGCAAATAGTTGTTGGTGCACCT
TCCCATCTGCAGGTGCCCAAACCTAGACGTACAATGTCTTGGTATGGTTT
TGTATTTGTCAAAAAAAAACATTTCTGTGTGCATGAACCCCTCTGGTCAT
GTGTGAAGATTCAGAGGTATGTGTGGTTGGTTCACTGAGTCATTGTCGGT
TTGCCCACCTGTCTATTAACACATGCCTGTATTTGTCAAGCTAGCAATGA
TATTGGGACAATACAATTGCATTAGGTGAGACTCACTCTTGTGTGTTTGT
GCACAAATGTCCAGGATCTCTTTGGTTTCTTGCATCATTTGCGTGAGAGG
GTAGAACCTGGTGCAAAGGCAACAGGTGTACGACCCCCACAAATTCAACA
TATCCTCAATTACAAGGCCTGCCACTCCGCCATCAGGTAGGTCTCGATCA
TGGCAGAGCCGCTGATTGATTCGTCGAAATACAACTCCTCTGGAGTCATA
CCATTATCTGCATCTTGCCAGCGAGCAAATGCTTTGGGAGCTGGTGTGAC
TGGTTGTTCCAATGACACCATTGCCTCTGTCTTTTTTTATGTTTAATTAG
TTCTGGGTGGACTGCCTGGGTGTATGTAACCCTAAGGAGATCGTTTTGAG
TGAATAGATTATGTCAAGGTGAGTACGTGTACATGTTTCACCATTAGAAC
CTGTGCTGACAAGATTTAGGTTTCTGAATGAGTAACACAGCAAGTGAGTG
TCTCGGGCAAGGAACAGTAGAGCAGTTCAGACTTTTGACCCTCCTTCAAG
TTAAGAACACGTGGCAATAGCAGCAGGTTGTGCTTGAGGGGGTTGATACA
TCTTTCCCTCCCAGCTTGCACTCCTTGTTGACGTCCTCCTCATCTGTCTA
CCCTCTCTGTTGCCCTTGTTTCCCTCCTTTCACTCTTTCCTCCATGTCCT
CTCTCAATTTTCCTGCGCAATTTCCACTTACCCCTTTCCTTCACTGGAAC
ACACAGATTTGGTGATTTACTGACCAACCTGGAGTGTGTTGAACTAATGT
CCAGGCTTGCAACATGTAAGCTCCCCTTCTTTTGTGCCCATGGTCGACCC
AGCGTAGTTCCTTTGTGTGTCCTGGGAGAACAGGTTGGAGGACATGACTT
GAAGTGATGGGTTGTTCGTGGGAAGCTTCTGCAATCTCTTTGGAGATTGT
AAGCGATTTTTTACTTCTGATCTGTTTATTGATACTTTGGAATGGTAATG
GGAGCATTTGGAATGTTACCCATTGCTCTATTCCATATTTTTTTATTGCC
TATTTTGTGCCACATATCTTTCTTGTTACAGAAAGTGATCTAAAGAAACC
ATAAGTGTATGAGCCCCTTACTCGGTTATTGAAAACCCTGTGATGAACAG
CTAATCATTGCGGATTAGTCTTTATCACGCAATGCATGGTTGGTCAAAAT
ACCTTTACTTTGATGTGGTTGCTTGATTCAAATAATGTTCGCTCTACTTG
GAGTAACAGGCATGAATAGCAATTATATGTGTATTGGTGTGTTAGAAGGT
GTTAGAGTATATGTGCTCTAGTCAACAGGTCCATTTCAATATCTCTTTTT
TTTACTTCCGCAAAATAGATGAATGGATTGTTTGACCTTTCATACAGCAC
AATGCATCTTACTGTTTTGGAGATGCAAATTGCAGGAAGAACCTACATAG
TGTATAGGCATTGACTCTAGGCCTATCATTGCATGTTTTCAGGATAAGGT
ATGGTAACTAGAGTTTGCTTCAGACGATAGAGACATCTTGCAGGATGTTT
TCAAAAACTAAAAGTGATCAAGGAACAGAACCCACCACCCCTACTGAAGA
TGTGAATATATGCTAACATGCTTATTGCTTACATGCGACATTTCTTGCCA
ACCTGCCGAGAAGATTTTGGTGGCATTTTTTATTTAGATGCATATCTGCA
TGCGTACAGATATTGGAGTGGTGATTAATGGGTGCAGCACCTTCGATGTT
GTGACTCTGAGCCCTGCCTGCCC back to topCoding sequence (CDS) from alignment at C-tenellus_contig1136:7102..14524- >mRNA_C-tenellus_contig1136.1.2 ID=mRNA_C-tenellus_contig1136.1.2|Name=mRNA_C-tenellus_contig1136.1.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=2928bp|location=Sequence derived from alignment at C-tenellus_contig1136:7102..14524- (Choristocarpus tenellus KU2346) ATGAACGTGCTACAAGGCCAGCAGAATGAGTACCCTGCAGACCGGTATTC GAGTCCTATCCTACCCAAGTACAGGTCACCAGAGCATTTGTCTAGTAGGG GATGGAGGCTGAATGGGGGAAGACATCTATCACAGGAGGACCATCCTCAG GTGTTACGCAGTCGTACAGATACGTCACAGGTCAGACACACACGTCAAGT ACGGAAGCGAGAGTGGAGACAGGGTAGTCAGAAATTATCTACTCAGAATT CTCCTGCCTTGTTCAGTGGGGGAGACTGTACAGGGGACTGGAATGAAGAG TCATCAGAGGTGGCAAGAGGTGGTGACAGTGATTCCCTGACCTGCCTATT CAATTACGCCTTTCCAGAGAAGAGGGATAGATCTCATCGTGATCAGCTGG CAGGAAAATGTGTATCTCATGGTAATACCACAAAGGGATTGGTAGTGGGT CTAGGTAATGGCACCGGGATCGATACAAGGATTGGCAAGAAGCGTGATCA TGGTAAATGGGGATCACGTCCCCCACCAGTGCCCTCCCTTATGGCAAGAA GGCGATTCAATTACCAGCGTCGAACTGTTCGGTGCAGGGGCCTGGGGGTG ACTGTGACAAGACCACCTAGCCCATCCTTCAGCTTCCTGGTAAAGGAGGT TACCAGTGTTGCTAAAAGCAAAAGTGAGGAAGGCCCTGGTACCCAAATCA ACACACCCTCACGTGATCCAGAAGAGGAGAGGACTGACGAAAGAAGTAGT ACAGTTGAGAACGGTGGAGAGCAGGGATTAGCCCCTCTACGTGAGAGTCC AACAAGGAGCCAGTTGAGAACGACAGGTGCCACCAGCTGCTCTTCTCCTC TAAGGTCAACCTCAACCAATCCTTCATTGCATGAGGTTGGAGATCTTGCC AATGGTTCATTGTCTCTGCCAGGAGTCCATCCATTGGAGAGTGAGGACTG CCAAAGAGACACCCCTCAACTATGCTCATCACTTGGAGAGTCCCTCCCAC ATACTAGTGATGTGGACGGACTGAGGCAGCCACCTGCCAGAGGTTGCAAG CGCCAAAGAGTGGTTGGGCCCACCTCGACAGCTGCCAACACAGGTGACAT CACTGTTGCAGCCACCACCGCAGCCACTACACCAACCAAAGCACAATCCT GTAGCGCATTCATTCCCATTAGTGGTGCAAATAGTTGCTCTTATTCTCTG GATGAAGACTGCACAAAGGATAATAATATTAGTTCACAGAAAGGGAAAAG AGTTGCAGGGAATAAAGATTCAGAACGGGAGGGAGATGCAGACCGGTATG GTGAAGCTGCGCTTGGTTCAGATCTCCACAATGGTTCTTCCCAGTCGAGG AAGAAAACTGGTTGGGAAAAGGAGAGAAGAAGGGTATCTCAAATAGAGGG TAGTGCACCATGGAGGGTTAAGGAATGCCTCAGCAAATACAATGCTCGTG GCCTGTTTATTGATGAGAAGGCACAAAGGAAACCTGAGGTTTGGCAGGAG GGCTTCAGGGATGTGGATAGATCTGTAAATGAGGTAGATGGAACGGTTTG GAACAAAATAGAGTTAATTCTGGGGCAAAATTGTGAACAGAAGCAAGAGG CCGGCAAGTCATCAGGAACTGTGTTGAAAAACATTGATCATAGGGTGGAG ACTGTCCCTAGAACTGTTGGGCAAACAGGCACTTGCACTTTGGATGATGA TTCGAAAGTTAGAGGACGTGACTTTGGCAAATCTGAGCAAATAGTGTTGA GACCTACAGAGGACAACGAGGAGAATAATGAAGTGGAGCCTCTTGACATA AACAGTGCACCAGTACTTGAGGCTGCAGACAAGGGTCAGGAAAGCAATGG CATGAGCGAGCTCTGCAATCAATCTGAACAGGATGAACTTGGTAATGCCA AGGCCAGAGACAATGCTGGTAGCACCAGTGTTGGCAGCAGCTTCTATGTA GCTGAGTCAGGCGAAGGTGTTCAAGGCAAGGCTAGTGACAATGATGATGA AGTAGGTTCCAACCTGGATGGAGAAAATTTTGCTGGAGGGGATCTGTTGG AGGACTTTGTGGAAGCAGACCCATACGACAGCTGTGGCGTATCAAATCCT GGAGGCATTCACGCATCCCAAGGAGCTGTTCATCTGCTTGGTACAGGACT TGACAACATGCCAGGGAAGATTCACCTTGGCATGCAAGGGACTACAGATC GCAAGGCGGAACGCCCAATCGCAGGTGTGACTGAGGCAAGTCGTAACGAG CTGAAGGCTGGAGCTGGGGCTGTGGCGATCACTTTGACTCCAGAAGAGCT GGATAGGGCGCAAGTGATAGGGCAGGCAGGGCGCAAGTTCATTCTGCTGC GTGCCATGACAGGAGCAGTACTTTGCGTAGATCAGCATGCTGCAGATGAA AGGGTGAAACTTGAGGACTTGGAGAGGCAGGTTTATGGGCCAGCGCGAAA TGAAAGGAACGTAAAGAAGTTTGCCTTAAATCCTGCAGAAGTTTCACCAC TCACTCGCACTGATGCTGAGCTTGTCGAGCAGCACCGCAAAGTGCTGGTC TCGTGGAACTTTGATATTGAGGTGGAGGAAACAATTGGCATGTCCTTCCC ACAGGCCAAGCTTCACTCTGTGCCTGAGGTGTGCGGAGTGCGTTTGTCAA TGCAGGATCTCTTTGGTTTCTTGCATCATTTGCGTGAGAGGGTAGAACCT GGTGCAAAGGCAACAGGTGTACGACCCCCACAAATTCAACATATCCTCAA TTACAAGGCCTGCCACTCCGCCATCAGATTTGGTGATTTACTGACCAACC TGGAGTGTGTTGAACTAATGTCCAGGCTTGCAACATGTAAGCTCCCCTTC TTTTGTGCCCATGGTCGACCCAGCGTAGTTCCTTTGTGTGTCCTGGGAGA ACAGGTTGGAGGACATGACTTGAAGTGA back to top
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