mRNA_C-tenellus_contig1127.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig1127.1.1 vs. uniprot
Match: A0A6H5JQX9_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQX9_9PHAE) HSP 1 Score: 419 bits (1077), Expect = 1.160e-139 Identity = 205/269 (76.21%), Postives = 237/269 (88.10%), Query Frame = 1 Query: 55 SAMESQDYVMSMKSVGKQLPGGRELFGNASLSFTHGAKIGVLGVNGSGKSTVLKILAGQDKEHDGEVWIKEGLRVKYLSQEPDLDLNLNVMDNIRIGIAEQESLVRRFEEVSVSMGDPEADLDALLAEQSELQSRIDEADAWTLQHRVDISMRKLRVPPGDSPVAQLSGGEKRRVALCRLLLEMPDIVLLDEPTNHLDAESVLWLEEYLRSFKGTVISITHDRYFLDNVASWILEVDRGVLIPYKGNYSEWLHQKQGRLDLEHTKQVSV 861 S+ E+ + V++M V KQLPGGR+LF +ASL+F GAKIGVLGVNGSGKSTVLKI+AG+DKE DG++W ++GLRVKYL QEPDLD +LNVMDNIR GIAEQE LV RFEE ++MGDP+ADLDALL EQ+ LQ++I++ADAW LQHRVDI+MRKLRVPPGDSPV QLSGGEKRRVALCRLLLE PD++LLDEPTNHLDAESV WLE+YLR+FKGTVISITHDRYFLDNVA WILEVDRG L+P++GNYS WL QKQ RLD EH+KQ V Sbjct: 163 SSTETTETVITMDGVSKQLPGGRQLFADASLTFMRGAKIGVLGVNGSGKSTVLKIIAGEDKEFDGDMWTRDGLRVKYLPQEPDLDSSLNVMDNIRRGIAEQEDLVARFEETGIAMGDPDADLDALLEEQAALQAKIEDADAWNLQHRVDIAMRKLRVPPGDSPVDQLSGGEKRRVALCRLLLEQPDVILLDEPTNHLDAESVRWLEDYLRAFKGTVISITHDRYFLDNVAGWILEVDRGSLLPFRGNYSAWLVQKQNRLDREHSKQAQV 431
BLAST of mRNA_C-tenellus_contig1127.1.1 vs. uniprot
Match: D7FX01_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX01_ECTSI) HSP 1 Score: 412 bits (1060), Expect = 2.420e-139 Identity = 201/258 (77.91%), Postives = 230/258 (89.15%), Query Frame = 1 Query: 88 MKSVGKQLPGGRELFGNASLSFTHGAKIGVLGVNGSGKSTVLKILAGQDKEHDGEVWIKEGLRVKYLSQEPDLDLNLNVMDNIRIGIAEQESLVRRFEEVSVSMGDPEADLDALLAEQSELQSRIDEADAWTLQHRVDISMRKLRVPPGDSPVAQLSGGEKRRVALCRLLLEMPDIVLLDEPTNHLDAESVLWLEEYLRSFKGTVISITHDRYFLDNVASWILEVDRGVLIPYKGNYSEWLHQKQGRLDLEHTKQVSV 861 M V KQLPGGR+LF +ASL+F GAKIGVLGVNGSGKSTVLKI+AG+DKE DG++W ++GLRVKYL QEPDLD +LNVM+NIR GIAEQE++V RFEE ++MGDP+ADLDALL EQ+ LQ++I++ADAW LQHRVDI+MRKLRVPPGDSPV QLSGGEKRRVALCRLLLE PD++LLDEPTNHLDAESV WLE+YLR+FKGTVISITHDRYFLDNVA WILEVDRG L+P+KGNYS WL QKQ RLD EH+KQ V Sbjct: 1 MDGVSKQLPGGRQLFADASLTFMRGAKIGVLGVNGSGKSTVLKIIAGEDKEFDGDMWTRDGLRVKYLPQEPDLDSSLNVMENIRRGIAEQENMVARFEETGIAMGDPDADLDALLEEQAALQAKIEDADAWNLQHRVDIAMRKLRVPPGDSPVDQLSGGEKRRVALCRLLLEQPDVILLDEPTNHLDAESVRWLEDYLRAFKGTVISITHDRYFLDNVAGWILEVDRGSLLPFKGNYSAWLVQKQNRLDREHSKQAQV 258
BLAST of mRNA_C-tenellus_contig1127.1.1 vs. uniprot
Match: A0A835ZAC8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAC8_9STRA) HSP 1 Score: 347 bits (890), Expect = 3.580e-113 Identity = 166/259 (64.09%), Postives = 209/259 (80.69%), Query Frame = 1 Query: 64 ESQDYVMSMKSVGKQLPGGRELFGNASLSFTHGAKIGVLGVNGSGKSTVLKILAGQDKEHDGEVWIKEGLRVKYLSQEPDLDLNLNVMDNIRIGIAEQESLVRRFEEVSVSMGDPEADLDALLAEQSELQSRIDEADAWTLQHRVDISMRKLRVPPGDSPVAQLSGGEKRRVALCRLLLEMPDIVLLDEPTNHLDAESVLWLEEYLRSFKGTVISITHDRYFLDNVASWILEVDRGVLIPYKGNYSEWLHQKQGRLDLE 840 +S + V+S+ V K+LPGGR LF SL+F HGAKIGVLG NG GKS+++KILAG D E DG +W + GL++ YL QEP LD +L+VM N+R+GIAEQE+L+ RF+ +S +MGDP+AD DALL EQ+ LQ+RID+ AW LQH V+I+M +L VPP +PVA LSGGE+RRVALCR+LLE PD+++LDEPTNHLDAE WLE YL++F+G VIS+THDRYFLDNVASWILE+DRG IPY+GNYS WL KQ RL++E Sbjct: 37 QSAEVVLSLVDVRKRLPGGRTLFDGVSLNFNHGAKIGVLGANGCGKSSLMKILAGLDAEFDGALWRRPGLKILYLPQEPQLDPDLDVMGNVRLGIAEQEALLARFDAISAAMGDPDADFDALLTEQAALQTRIDDLGAWALQHEVEIAMARLHVPPPRAPVASLSGGERRRVALCRMLLEKPDVLILDEPTNHLDAECTRWLETYLQAFRGMVISVTHDRYFLDNVASWILEIDRGATIPYEGNYSAWLAAKQRRLNVE 295
BLAST of mRNA_C-tenellus_contig1127.1.1 vs. uniprot
Match: A0A8K1FE21_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FE21_PYTOL) HSP 1 Score: 331 bits (849), Expect = 5.960e-107 Identity = 160/256 (62.50%), Postives = 202/256 (78.91%), Query Frame = 1 Query: 73 DYVMSMKSVGKQLPGGRELFGNASLSFTHGAKIGVLGVNGSGKSTVLKILAGQDKEHDGEVWIKEGLRVKYLSQEPDLDLNLNVMDNIRIGIAEQESLVRRFEEVSVSMGDPEADLDALLAEQSELQSRIDEADAWTLQHRVDISMRKLRVPPGDSPVAQLSGGEKRRVALCRLLLEMPDIVLLDEPTNHLDAESVLWLEEYLRSFKGTVISITHDRYFLDNVASWILEVDRGVLIPYKGNYSEWLHQKQGRLDLE 840 D+V +K VG +PGG++LF SL F GAKIGVLG NG+GKST+LKI+AG KE DGE W+K+GLRV YL+QEP LD N NV +NI G+ E L+ RF+EVS++MG+P+AD D LLAEQ+ELQ +ID + W L H V+ +M LRVPP D V LSGGE+RRVALCRLLLE PD++LLDEPTNHLDAESV WLEE+L+++KGTV+SITHDRYFLDNVA W+LE+DRG Y+GNY++WL Q++ RL+++ Sbjct: 53 DFVCHLKDVGVTIPGGKKLFERVSLGFLRGAKIGVLGPNGTGKSTLLKIIAGVRKEFDGERWVKDGLRVGYLAQEPYLDPNKNVYENIMDGLKETTDLLERFDEVSMAMGEPDADFDTLLAEQAELQDKIDHLNCWDLSHEVEKAMAALRVPPRDGDVEVLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEEFLQNYKGTVLSITHDRYFLDNVAGWVLELDRGETYAYEGNYTKWLQQRRNRLNMQ 308
BLAST of mRNA_C-tenellus_contig1127.1.1 vs. uniprot
Match: W7TRE6_9STRA (Abc transporter atp-binding protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRE6_9STRA) HSP 1 Score: 331 bits (849), Expect = 6.290e-107 Identity = 158/275 (57.45%), Postives = 212/275 (77.09%), Query Frame = 1 Query: 34 GGAKGGSSAMESQDYVMSMKSVGKQLPGGRELFGNASLSFTHGAKIGVLGVNGSGKSTVLKILAGQDKEHDGEVWIKEGLRVKYLSQEPDLDLNLNVMDNIRIGIAEQESLVRRFEEVSVSMGDPEADLDALLAEQSELQSRIDEADAWTLQHRVDISMRKLRVPPGDSPVAQLSGGEKRRVALCRLLLEMPDIVLLDEPTNHLDAESVLWLEEYLRSFKGTVISITHDRYFLDNVASWILEVDRGVLIPYKGNYSEWLHQKQGRLDLEHTKQVS 858 GG S+A + + + S+ V K LPGGR L + LSF GAKIGVLGVNGSGKS++LKI++G D+EH G VW K ++ YL+QEP LD L+V N+R+GIAEQE+LV++F+E+++ MG+ +ADLD LL EQ+ELQ RI+ D W ++HRVD M+ L +PP D+ + LSGGE+RRVALCR+LLE PD++LLDEPTNHLDA+SV WLE +L+ ++GTVI++THDRYFLDN+A W+LEVDRG L+P++GNY++WL K RLDLE K+ + Sbjct: 31 GGGSNPSNAPSTGEIICSLSDVTKVLPGGRVLLKDTRLSFFRGAKIGVLGVNGSGKSSLLKIISGVDQEHHGVVWRKPDVKFMYLAQEPQLDPALDVKGNVRLGIAEQEALVQKFDEIAMKMGETDADLDKLLEEQAELQGRIEALDCWNVEHRVDTVMKALHLPPPDASIISLSGGERRRVALCRMLLEQPDVLLLDEPTNHLDADSVAWLERFLQEYRGTVIAVTHDRYFLDNIARWVLEVDRGSLLPFQGNYTQWLEHKAARLDLERGKEAA 305
BLAST of mRNA_C-tenellus_contig1127.1.1 vs. uniprot
Match: A0A248JNM2_9PROT (Energy-dependent translational throttle protein EttA n=7 Tax=Nitrospirillum TaxID=1543705 RepID=A0A248JNM2_9PROT) HSP 1 Score: 327 bits (838), Expect = 1.100e-105 Identity = 162/260 (62.31%), Postives = 197/260 (75.77%), Query Frame = 1 Query: 61 MESQDYVMSMKSVGKQLPGGRELFGNASLSFTHGAKIGVLGVNGSGKSTVLKILAGQDKEHDGEVWIKEGLRVKYLSQEPDLDLNLNVMDNIRIGIAEQESLVRRFEEVSVSMGDPEADLDALLAEQSELQSRIDEADAWTLQHRVDISMRKLRVPPGDSPVAQLSGGEKRRVALCRLLLEMPDIVLLDEPTNHLDAESVLWLEEYLRSFKGTVISITHDRYFLDNVASWILEVDRGVLIPYKGNYSEWLHQKQGRLDLE 840 M S YV MK V K PGGR++F N LSF GAKIGVLGVNGSGKST+LKI+AG DK+++GE W +G+ V YL QEP LD N NV +N+ + + L+ RF EVS +M DP+AD DAL+AEQ+ELQ +ID ADAW ++ VDI+M LR PPGD+ V +LSGGEKRRVALC+LLL PD++LLDEPTNHLDAESV WL+ +L +KGTV+ +THDRYFLDNV WILE+DRG IPY+GNYS WL QK+ RL E Sbjct: 1 MASYQYVYVMKGVTKVYPGGRKVFENIWLSFYPGAKIGVLGVNGSGKSTLLKIMAGLDKDYNGEAWAADGVSVGYLPQEPQLDPNKNVQENVMDALGATKGLLDRFNEVSNAMADPDADFDALIAEQAELQEKIDAADAWDIERTVDIAMDALRCPPGDADVTKLSGGEKRRVALCKLLLSKPDMLLLDEPTNHLDAESVAWLQRFLADYKGTVVMVTHDRYFLDNVTGWILELDRGSGIPYEGNYSSWLEQKEKRLAQE 260
BLAST of mRNA_C-tenellus_contig1127.1.1 vs. uniprot
Match: UPI0015D4E6C7 (energy-dependent translational throttle protein EttA n=1 Tax=Azospirillum oleiclasticum TaxID=2735135 RepID=UPI0015D4E6C7) HSP 1 Score: 323 bits (829), Expect = 2.470e-104 Identity = 163/260 (62.69%), Postives = 196/260 (75.38%), Query Frame = 1 Query: 61 MESQDYVMSMKSVGKQLPGGRELFGNASLSFTHGAKIGVLGVNGSGKSTVLKILAGQDKEHDGEVWIKEGLRVKYLSQEPDLDLNLNVMDNIRIGIAEQESLVRRFEEVSVSMGDPEADLDALLAEQSELQSRIDEADAWTLQHRVDISMRKLRVPPGDSPVAQLSGGEKRRVALCRLLLEMPDIVLLDEPTNHLDAESVLWLEEYLRSFKGTVISITHDRYFLDNVASWILEVDRGVLIPYKGNYSEWLHQKQGRLDLE 840 M S YV MK + K PGG+++ N LSF GAKIGV+GVNGSGKST+LKI+AG DK+++GE W EG +V YL QEP LD + V +N+ + E +SLV RF EVS M +P+AD DALL EQ+ELQ +ID ADAW L+ VDI+M LR PPGDS V +LSGGEKRRVALC+LLLE PD++LLDEPTNHLDAESV WLE +L +KGTV+ +THDRYFLDNV WILE+DRG IPY+G YS WL QKQ RL+ E Sbjct: 1 MASYQYVYVMKGLTKVYPGGKKVLDNVWLSFYPGAKIGVIGVNGSGKSTLLKIMAGLDKDYNGEAWSAEGAKVGYLPQEPQLDPSKTVQENVLEALKETKSLVDRFNEVSNLMAEPDADFDALLTEQAELQEKIDAADAWDLERTVDIAMDALRCPPGDSSVDKLSGGEKRRVALCKLLLEKPDLLLLDEPTNHLDAESVAWLERHLEEYKGTVVLVTHDRYFLDNVTGWILELDRGQGIPYEGAYSAWLEQKQKRLEQE 260
BLAST of mRNA_C-tenellus_contig1127.1.1 vs. uniprot
Match: A0A5D6XY47_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XY47_9STRA) HSP 1 Score: 324 bits (831), Expect = 2.760e-104 Identity = 154/256 (60.16%), Postives = 200/256 (78.12%), Query Frame = 1 Query: 73 DYVMSMKSVGKQLPGGRELFGNASLSFTHGAKIGVLGVNGSGKSTVLKILAGQDKEHDGEVWIKEGLRVKYLSQEPDLDLNLNVMDNIRIGIAEQESLVRRFEEVSVSMGDPEADLDALLAEQSELQSRIDEADAWTLQHRVDISMRKLRVPPGDSPVAQLSGGEKRRVALCRLLLEMPDIVLLDEPTNHLDAESVLWLEEYLRSFKGTVISITHDRYFLDNVASWILEVDRGVLIPYKGNYSEWLHQKQGRLDLE 840 D+V ++ VG +PGG++LF SL F GAKIGVLG NGSGKS++LK++AG ++ DGE W+K+GLR+ YL QEP LD + NV +NI G+AE ++L+RRF+EVS +MG+P+AD DALLAE +ELQ +ID W L H VD +MR LRVP D+ V LSGGE+RRVALCRLLLE PD++LLDEPTNHLDAESV WLE++L+ + GTV+SITHDRYFLDNVA W+LE+DRG Y+GNY+ WL Q++ R +++ Sbjct: 50 DFVCHLRDVGVTIPGGKKLFERVSLGFLRGAKIGVLGANGSGKSSLLKVVAGVARDFDGERWVKDGLRIGYLEQEPRLDPSKNVYENIMDGLAESQALLRRFDEVSAAMGEPDADFDALLAESAELQDQIDHLGCWDLSHEVDKAMRALRVPARDADVEVLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEDFLQGYPGTVLSITHDRYFLDNVAGWVLELDRGETYAYEGNYTRWLQQRRNRFNMQ 305
BLAST of mRNA_C-tenellus_contig1127.1.1 vs. uniprot
Match: UPI001A96756E (energy-dependent translational throttle protein EttA n=1 Tax=Azospirillum sp. SYSU D00513 TaxID=2812561 RepID=UPI001A96756E) HSP 1 Score: 322 bits (826), Expect = 6.980e-104 Identity = 158/260 (60.77%), Postives = 196/260 (75.38%), Query Frame = 1 Query: 61 MESQDYVMSMKSVGKQLPGGRELFGNASLSFTHGAKIGVLGVNGSGKSTVLKILAGQDKEHDGEVWIKEGLRVKYLSQEPDLDLNLNVMDNIRIGIAEQESLVRRFEEVSVSMGDPEADLDALLAEQSELQSRIDEADAWTLQHRVDISMRKLRVPPGDSPVAQLSGGEKRRVALCRLLLEMPDIVLLDEPTNHLDAESVLWLEEYLRSFKGTVISITHDRYFLDNVASWILEVDRGVLIPYKGNYSEWLHQKQGRLDLE 840 M S YV MK + K PGG+++ N LSF G KIGVLG NG+GKST++KI+AG DK+ GE W EG +V YL QEP LD + NV +N+ +AE + L+ RF EVS M DP+AD DAL+AEQ++LQ +I+ ADAW + V+I+M LR PPGD+ V++LSGGEKRRVALC+LLLE PD++LLDEPTNHLDAESV WLE +L+ +KGTV+ +THDRYFLDNV WILE+DRG IPY+GNYS WL QKQ RLD E Sbjct: 1 MASYQYVYVMKGLTKVYPGGKKVLDNIYLSFLPGVKIGVLGANGAGKSTLMKIMAGMDKDFSGEAWSAEGAKVGYLPQEPQLDPSKNVHENVMEALAETKGLLDRFNEVSNMMADPDADFDALMAEQADLQEKIEAADAWDIDRTVEIAMDALRCPPGDADVSKLSGGEKRRVALCKLLLEKPDLLLLDEPTNHLDAESVAWLERHLQEYKGTVVLVTHDRYFLDNVTGWILELDRGSGIPYEGNYSSWLEQKQKRLDQE 260
BLAST of mRNA_C-tenellus_contig1127.1.1 vs. uniprot
Match: A0A6I7PC24_9PROT (Energy-dependent translational throttle protein EttA n=1 Tax=Geminicoccaceae bacterium TaxID=2448052 RepID=A0A6I7PC24_9PROT) HSP 1 Score: 322 bits (824), Expect = 1.390e-103 Identity = 153/260 (58.85%), Postives = 203/260 (78.08%), Query Frame = 1 Query: 61 MESQDYVMSMKSVGKQLPGGRELFGNASLSFTHGAKIGVLGVNGSGKSTVLKILAGQDKEHDGEVWIKEGLRVKYLSQEPDLDLNLNVMDNIRIGIAEQESLVRRFEEVSVSMGDPEADLDALLAEQSELQSRIDEADAWTLQHRVDISMRKLRVPPGDSPVAQLSGGEKRRVALCRLLLEMPDIVLLDEPTNHLDAESVLWLEEYLRSFKGTVISITHDRYFLDNVASWILEVDRGVLIPYKGNYSEWLHQKQGRLDLE 840 M + Y+ M+ + K PGG+++F N +L+F GAKIGVLGVNG+GKSTVLKI+AG DK+ +GE W +G+++ YLSQEP+LD + +VM N+ G+AE ++L+ RF EVS+ D +AD DAL+AEQ++LQ +ID + W ++ V+++M LR PPGD+ VA LSGGEKRRVALCRLLL PD++LLDEPTNHLDAESV WLE +L+ +KGTV++ITHDRYFLDNVA WILE+DRG IP++GNYS WL K+ RL+ E Sbjct: 1 MAAYQYIYVMRQLTKIFPGGKKIFENVTLAFLPGAKIGVLGVNGAGKSTVLKIMAGLDKDFNGEAWAADGVKIGYLSQEPELDPSKDVMGNVMEGVAETKALIDRFNEVSMHFADEDADFDALMAEQADLQEKIDAVNGWEIERTVEMAMDALRCPPGDAEVATLSGGEKRRVALCRLLLAQPDMLLLDEPTNHLDAESVAWLERFLQEYKGTVVAITHDRYFLDNVAGWILEIDRGRGIPFEGNYSAWLENKRKRLEQE 260 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1127.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1127.1.1 >prot_C-tenellus_contig1127.1.1 ID=prot_C-tenellus_contig1127.1.1|Name=mRNA_C-tenellus_contig1127.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=287bp KGGGGGRTGKGGGAKGGSSAMESQDYVMSMKSVGKQLPGGRELFGNASLSback to top mRNA from alignment at C-tenellus_contig1127:142..6199- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig1127.1.1 ID=mRNA_C-tenellus_contig1127.1.1|Name=mRNA_C-tenellus_contig1127.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=6058bp|location=Sequence derived from alignment at C-tenellus_contig1127:142..6199- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig1127:142..6199- >mRNA_C-tenellus_contig1127.1.1 ID=mRNA_C-tenellus_contig1127.1.1|Name=mRNA_C-tenellus_contig1127.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=861bp|location=Sequence derived from alignment at C-tenellus_contig1127:142..6199- (Choristocarpus tenellus KU2346)back to top |