mRNA_C-tenellus_contig11266.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig11266.1.1 vs. uniprot
Match: D7FKK5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKK5_ECTSI) HSP 1 Score: 142 bits (359), Expect = 7.460e-37 Identity = 79/107 (73.83%), Postives = 82/107 (76.64%), Query Frame = 1 Query: 22 MRWIDTVASYLPSLIVQHLIDRMYERTDKQSSTPLAQCRTTSKELPRRQEYETVCLFADVSGFTALSEAMMMSKESGAGVEGLAKHLNSYFGQMVRIIASEGGDVFK 342 MRWIDTVASYLPSLIV HLI R TT++ELP RQEY+TVCLFADVSGFTALSEAMM S E GVEGLAKHLNSYFGQMVRIIASEGGDVFK Sbjct: 1 MRWIDTVASYLPSLIVNHLIKR-----------------TTNEELPSRQEYDTVCLFADVSGFTALSEAMMSSSE---GVEGLAKHLNSYFGQMVRIIASEGGDVFK 87
BLAST of mRNA_C-tenellus_contig11266.1.1 vs. uniprot
Match: F0XWN7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWN7_AURAN) HSP 1 Score: 98.2 bits (243), Expect = 3.310e-21 Identity = 53/114 (46.49%), Postives = 69/114 (60.53%), Query Frame = 1 Query: 1 RFKRSLIMRWIDTVASYLPSLIVQHLIDRMYERTDKQSSTPLAQCRTTSKELPRRQEYETVCLFADVSGFTALSEAMMMSKESGAGVEGLAKHLNSYFGQMVRIIASEGGDVFK 342 R +R M+++D +ASY+PSL+V HL+D + +P R+ + TVCLF DVSGFT LSEAM +SG G EGL HLNSYF QM +II+ GGD+FK Sbjct: 531 RARRETTMKYLDILASYVPSLVVSHLLDDL------------------EGPVPTREAFRTVCLFCDVSGFTKLSEAMA---QSGRGAEGLKTHLNSYFSQMNKIISGNGGDIFK 623
BLAST of mRNA_C-tenellus_contig11266.1.1 vs. uniprot
Match: A0A2R5G8Z7_9STRA (Phosphodiesterase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G8Z7_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 1.640e-18 Identity = 53/107 (49.53%), Postives = 67/107 (62.62%), Query Frame = 1 Query: 22 MRWIDTVASYLPSLIVQHLIDRMYERTDKQSSTPLAQCRTTSKELPRRQEYETVCLFADVSGFTALSEAMMMSKESGAGVEGLAKHLNSYFGQMVRIIASEGGDVFK 342 MR+I+ +ASYLPS++V ++ E ++Q+ R S + PR Y+ CLFADVSGFT LSE M G E LAK LNSYF Q+V+II SEGGDVFK Sbjct: 1 MRYIELLASYLPSVVVDEILK--LEEEERQTKE-----RYDSSQ-PRLTNYDAACLFADVSGFTKLSERMSFRYGPHVGAEHLAKQLNSYFSQLVKIINSEGGDVFK 99
BLAST of mRNA_C-tenellus_contig11266.1.1 vs. uniprot
Match: A0A8J2SL26_9STRA (Hypothetical protein n=4 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SL26_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 1.390e-17 Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 1 Query: 22 MRWIDTVASYLPSLIVQHLIDRMYERTDKQSSTPLAQCRTTSKELPRRQEYETVCLFADVSGFTALSEAMMMSKESGAGVEGLAKHLNSYFGQMVRIIASEGGDVFK 342 MR+++ +ASY+P ++V+HL+D + P R+ ETVC+F DVSGFT L+E + ++ G G EGL K LNSYFGQ+ RI+A GGD+FK Sbjct: 1 MRYLEILASYVPQVVVRHLLD------------------SPDAPTPSRKTLETVCMFCDVSGFTRLTERLAIT---GEGAEGLKKTLNSYFGQLNRIVAGHGGDIFK 86
BLAST of mRNA_C-tenellus_contig11266.1.1 vs. uniprot
Match: A0A5A8CC48_CAFRO (Phosphodiesterase n=7 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CC48_CAFRO) HSP 1 Score: 86.3 bits (212), Expect = 5.010e-17 Identity = 50/107 (46.73%), Postives = 67/107 (62.62%), Query Frame = 1 Query: 22 MRWIDTVASYLPSLIVQHLIDRMYERTDKQSSTPLAQCRTTSKELPRRQEYETVCLFADVSGFTALSEAMMMSKESGAGVEGLAKHLNSYFGQMVRIIASEGGDVFK 342 M++I+ +ASY+PS+IV+ L+ + S++ PRR TV +FADVSGFT LSEAM ++ G E L +HLNSYF QMV+ IASEGGD+FK Sbjct: 1 MKFIEILASYMPSIIVKDLL----------------RDEVASEKAPRRVVLPTVVMFADVSGFTKLSEAM--ARHGPEGAEYLTRHLNSYFSQMVKSIASEGGDIFK 89
BLAST of mRNA_C-tenellus_contig11266.1.1 vs. uniprot
Match: A0A0G4IWG7_PLABS (Phosphodiesterase n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IWG7_PLABS) HSP 1 Score: 84.7 bits (208), Expect = 1.720e-16 Identity = 52/104 (50.00%), Postives = 63/104 (60.58%), Query Frame = 1 Query: 31 IDTVASYLPSLIVQHLIDRMYERTDKQSSTPLAQCRTTSKELPRRQEYETVCLFADVSGFTALSEAMMMSKESGAGVEGLAKHLNSYFGQMVRIIASEGGDVFK 342 ID + SY+P+ I++ L E S +A P R YETV LFADVSGFT LSE + M G+ E LAKHLNSYF Q+VR+IAS+GGDVFK Sbjct: 39 IDALCSYVPASIIRFL----QENASSDKSHMVA---------PFRHSYETVVLFADVSGFTDLSERLAMKGREGS--EQLAKHLNSYFEQLVRVIASQGGDVFK 127
BLAST of mRNA_C-tenellus_contig11266.1.1 vs. uniprot
Match: A0A482UEW8_9ARCH (Guanylate cyclase domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UEW8_9ARCH) HSP 1 Score: 79.7 bits (195), Expect = 2.090e-16 Identity = 41/58 (70.69%), Postives = 47/58 (81.03%), Query Frame = 1 Query: 172 YETVCLFADVSGFTALSEAMMMSKESGAGVEGLAKHLNSYFGQMVRIIASEGGDVFKV 345 + TVC+FADVSGFTALSEAM ++ G E LAKHLNSYF QMV+IIAS GGD+FKV Sbjct: 59 FSTVCMFADVSGFTALSEAM--ARYGPEGAEYLAKHLNSYFSQMVKIIASMGGDIFKV 114
BLAST of mRNA_C-tenellus_contig11266.1.1 vs. uniprot
Match: A0A485LBZ0_9STRA (Aste57867_19187 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LBZ0_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 9.830e-13 Identity = 42/104 (40.38%), Postives = 66/104 (63.46%), Query Frame = 1 Query: 40 VASYLPSLIVQHL--IDRMYERTDKQSSTPLAQCRTTS-KELPRRQEYETVCLFADVSGFTALSEAMMMSKESGAGVEGLAKHLNSYFGQMVRIIASEGGDVFK 342 +++YLP+++ +HL + + +++ +SS+ +LP V +FADVSGFTAL+E + +GA E LAKHLNSYF Q++++I+SEGGD FK Sbjct: 7 ISAYLPAIVRRHLEASEHIKDKSPPKSSSAADDAAVVDMSDLPDTHSATVVSMFADVSGFTALTETLATRGPTGA--EYLAKHLNSYFEQLLKLISSEGGDAFK 108
BLAST of mRNA_C-tenellus_contig11266.1.1 vs. uniprot
Match: A0A397ACA6_9STRA (Guanylate cyclase domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397ACA6_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 1.320e-12 Identity = 43/101 (42.57%), Postives = 61/101 (60.40%), Query Frame = 1 Query: 40 VASYLPSLIVQHLIDRMYERTDKQSSTPLAQCRTTSKELPRRQEYETVCLFADVSGFTALSEAMMMSKESGAGVEGLAKHLNSYFGQMVRIIASEGGDVFK 342 +++YLP+++ + L R S E+P E V +FADVSGFTAL+E++ SGA EGL K+LNSYF Q++++I+SEGGDVFK Sbjct: 7 ISAYLPAIVRRRLETR------------------DSVEVPDTHSAEVVSMFADVSGFTALTESLAARGPSGA--EGLGKYLNSYFEQLLKLISSEGGDVFK 87
BLAST of mRNA_C-tenellus_contig11266.1.1 vs. uniprot
Match: W4H524_9STRA (Uncharacterized protein n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H524_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 1.340e-12 Identity = 43/101 (42.57%), Postives = 61/101 (60.40%), Query Frame = 1 Query: 40 VASYLPSLIVQHLIDRMYERTDKQSSTPLAQCRTTSKELPRRQEYETVCLFADVSGFTALSEAMMMSKESGAGVEGLAKHLNSYFGQMVRIIASEGGDVFK 342 +++YLP+++ + L R S E+P E V +FADVSGFTAL+E++ SGA EGL K+LNSYF Q++++I+SEGGDVFK Sbjct: 7 ISAYLPAIVRRRLETR------------------DSVEVPDTHNAEVVSMFADVSGFTALTESLAARGPSGA--EGLGKYLNSYFEQLLKLISSEGGDVFK 87 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11266.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig11266.1.1 >prot_C-tenellus_contig11266.1.1 ID=prot_C-tenellus_contig11266.1.1|Name=mRNA_C-tenellus_contig11266.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=125bp MRWIDTVASYLPSLIVQHLIDRMYERTDKQSSTPLAQCRTTSKELPRRQEback to top mRNA from alignment at C-tenellus_contig11266:3430..3899+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig11266.1.1 ID=mRNA_C-tenellus_contig11266.1.1|Name=mRNA_C-tenellus_contig11266.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=470bp|location=Sequence derived from alignment at C-tenellus_contig11266:3430..3899+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig11266:3430..3899+ >mRNA_C-tenellus_contig11266.1.1 ID=mRNA_C-tenellus_contig11266.1.1|Name=mRNA_C-tenellus_contig11266.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=375bp|location=Sequence derived from alignment at C-tenellus_contig11266:3430..3899+ (Choristocarpus tenellus KU2346)back to top |