mRNA_C-tenellus_contig11266.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig11266.1.1
Unique NamemRNA_C-tenellus_contig11266.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig11266.1.1 vs. uniprot
Match: D7FKK5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKK5_ECTSI)

HSP 1 Score: 142 bits (359), Expect = 7.460e-37
Identity = 79/107 (73.83%), Postives = 82/107 (76.64%), Query Frame = 1
Query:   22 MRWIDTVASYLPSLIVQHLIDRMYERTDKQSSTPLAQCRTTSKELPRRQEYETVCLFADVSGFTALSEAMMMSKESGAGVEGLAKHLNSYFGQMVRIIASEGGDVFK 342
            MRWIDTVASYLPSLIV HLI R                 TT++ELP RQEY+TVCLFADVSGFTALSEAMM S E   GVEGLAKHLNSYFGQMVRIIASEGGDVFK
Sbjct:    1 MRWIDTVASYLPSLIVNHLIKR-----------------TTNEELPSRQEYDTVCLFADVSGFTALSEAMMSSSE---GVEGLAKHLNSYFGQMVRIIASEGGDVFK 87          
BLAST of mRNA_C-tenellus_contig11266.1.1 vs. uniprot
Match: F0XWN7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWN7_AURAN)

HSP 1 Score: 98.2 bits (243), Expect = 3.310e-21
Identity = 53/114 (46.49%), Postives = 69/114 (60.53%), Query Frame = 1
Query:    1 RFKRSLIMRWIDTVASYLPSLIVQHLIDRMYERTDKQSSTPLAQCRTTSKELPRRQEYETVCLFADVSGFTALSEAMMMSKESGAGVEGLAKHLNSYFGQMVRIIASEGGDVFK 342
            R +R   M+++D +ASY+PSL+V HL+D +                     +P R+ + TVCLF DVSGFT LSEAM    +SG G EGL  HLNSYF QM +II+  GGD+FK
Sbjct:  531 RARRETTMKYLDILASYVPSLVVSHLLDDL------------------EGPVPTREAFRTVCLFCDVSGFTKLSEAMA---QSGRGAEGLKTHLNSYFSQMNKIISGNGGDIFK 623          
BLAST of mRNA_C-tenellus_contig11266.1.1 vs. uniprot
Match: A0A2R5G8Z7_9STRA (Phosphodiesterase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G8Z7_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.640e-18
Identity = 53/107 (49.53%), Postives = 67/107 (62.62%), Query Frame = 1
Query:   22 MRWIDTVASYLPSLIVQHLIDRMYERTDKQSSTPLAQCRTTSKELPRRQEYETVCLFADVSGFTALSEAMMMSKESGAGVEGLAKHLNSYFGQMVRIIASEGGDVFK 342
            MR+I+ +ASYLPS++V  ++    E  ++Q+       R  S + PR   Y+  CLFADVSGFT LSE M        G E LAK LNSYF Q+V+II SEGGDVFK
Sbjct:    1 MRYIELLASYLPSVVVDEILK--LEEEERQTKE-----RYDSSQ-PRLTNYDAACLFADVSGFTKLSERMSFRYGPHVGAEHLAKQLNSYFSQLVKIINSEGGDVFK 99          
BLAST of mRNA_C-tenellus_contig11266.1.1 vs. uniprot
Match: A0A8J2SL26_9STRA (Hypothetical protein n=4 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SL26_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 1.390e-17
Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 1
Query:   22 MRWIDTVASYLPSLIVQHLIDRMYERTDKQSSTPLAQCRTTSKELPRRQEYETVCLFADVSGFTALSEAMMMSKESGAGVEGLAKHLNSYFGQMVRIIASEGGDVFK 342
            MR+++ +ASY+P ++V+HL+D                  +     P R+  ETVC+F DVSGFT L+E + ++   G G EGL K LNSYFGQ+ RI+A  GGD+FK
Sbjct:    1 MRYLEILASYVPQVVVRHLLD------------------SPDAPTPSRKTLETVCMFCDVSGFTRLTERLAIT---GEGAEGLKKTLNSYFGQLNRIVAGHGGDIFK 86          
BLAST of mRNA_C-tenellus_contig11266.1.1 vs. uniprot
Match: A0A5A8CC48_CAFRO (Phosphodiesterase n=7 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CC48_CAFRO)

HSP 1 Score: 86.3 bits (212), Expect = 5.010e-17
Identity = 50/107 (46.73%), Postives = 67/107 (62.62%), Query Frame = 1
Query:   22 MRWIDTVASYLPSLIVQHLIDRMYERTDKQSSTPLAQCRTTSKELPRRQEYETVCLFADVSGFTALSEAMMMSKESGAGVEGLAKHLNSYFGQMVRIIASEGGDVFK 342
            M++I+ +ASY+PS+IV+ L+                +    S++ PRR    TV +FADVSGFT LSEAM  ++    G E L +HLNSYF QMV+ IASEGGD+FK
Sbjct:    1 MKFIEILASYMPSIIVKDLL----------------RDEVASEKAPRRVVLPTVVMFADVSGFTKLSEAM--ARHGPEGAEYLTRHLNSYFSQMVKSIASEGGDIFK 89          
BLAST of mRNA_C-tenellus_contig11266.1.1 vs. uniprot
Match: A0A0G4IWG7_PLABS (Phosphodiesterase n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IWG7_PLABS)

HSP 1 Score: 84.7 bits (208), Expect = 1.720e-16
Identity = 52/104 (50.00%), Postives = 63/104 (60.58%), Query Frame = 1
Query:   31 IDTVASYLPSLIVQHLIDRMYERTDKQSSTPLAQCRTTSKELPRRQEYETVCLFADVSGFTALSEAMMMSKESGAGVEGLAKHLNSYFGQMVRIIASEGGDVFK 342
            ID + SY+P+ I++ L     E      S  +A         P R  YETV LFADVSGFT LSE + M    G+  E LAKHLNSYF Q+VR+IAS+GGDVFK
Sbjct:   39 IDALCSYVPASIIRFL----QENASSDKSHMVA---------PFRHSYETVVLFADVSGFTDLSERLAMKGREGS--EQLAKHLNSYFEQLVRVIASQGGDVFK 127          
BLAST of mRNA_C-tenellus_contig11266.1.1 vs. uniprot
Match: A0A482UEW8_9ARCH (Guanylate cyclase domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UEW8_9ARCH)

HSP 1 Score: 79.7 bits (195), Expect = 2.090e-16
Identity = 41/58 (70.69%), Postives = 47/58 (81.03%), Query Frame = 1
Query:  172 YETVCLFADVSGFTALSEAMMMSKESGAGVEGLAKHLNSYFGQMVRIIASEGGDVFKV 345
            + TVC+FADVSGFTALSEAM  ++    G E LAKHLNSYF QMV+IIAS GGD+FKV
Sbjct:   59 FSTVCMFADVSGFTALSEAM--ARYGPEGAEYLAKHLNSYFSQMVKIIASMGGDIFKV 114          
BLAST of mRNA_C-tenellus_contig11266.1.1 vs. uniprot
Match: A0A485LBZ0_9STRA (Aste57867_19187 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LBZ0_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 9.830e-13
Identity = 42/104 (40.38%), Postives = 66/104 (63.46%), Query Frame = 1
Query:   40 VASYLPSLIVQHL--IDRMYERTDKQSSTPLAQCRTTS-KELPRRQEYETVCLFADVSGFTALSEAMMMSKESGAGVEGLAKHLNSYFGQMVRIIASEGGDVFK 342
            +++YLP+++ +HL   + + +++  +SS+           +LP       V +FADVSGFTAL+E +     +GA  E LAKHLNSYF Q++++I+SEGGD FK
Sbjct:    7 ISAYLPAIVRRHLEASEHIKDKSPPKSSSAADDAAVVDMSDLPDTHSATVVSMFADVSGFTALTETLATRGPTGA--EYLAKHLNSYFEQLLKLISSEGGDAFK 108          
BLAST of mRNA_C-tenellus_contig11266.1.1 vs. uniprot
Match: A0A397ACA6_9STRA (Guanylate cyclase domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397ACA6_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 1.320e-12
Identity = 43/101 (42.57%), Postives = 61/101 (60.40%), Query Frame = 1
Query:   40 VASYLPSLIVQHLIDRMYERTDKQSSTPLAQCRTTSKELPRRQEYETVCLFADVSGFTALSEAMMMSKESGAGVEGLAKHLNSYFGQMVRIIASEGGDVFK 342
            +++YLP+++ + L  R                   S E+P     E V +FADVSGFTAL+E++     SGA  EGL K+LNSYF Q++++I+SEGGDVFK
Sbjct:    7 ISAYLPAIVRRRLETR------------------DSVEVPDTHSAEVVSMFADVSGFTALTESLAARGPSGA--EGLGKYLNSYFEQLLKLISSEGGDVFK 87          
BLAST of mRNA_C-tenellus_contig11266.1.1 vs. uniprot
Match: W4H524_9STRA (Uncharacterized protein n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H524_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 1.340e-12
Identity = 43/101 (42.57%), Postives = 61/101 (60.40%), Query Frame = 1
Query:   40 VASYLPSLIVQHLIDRMYERTDKQSSTPLAQCRTTSKELPRRQEYETVCLFADVSGFTALSEAMMMSKESGAGVEGLAKHLNSYFGQMVRIIASEGGDVFK 342
            +++YLP+++ + L  R                   S E+P     E V +FADVSGFTAL+E++     SGA  EGL K+LNSYF Q++++I+SEGGDVFK
Sbjct:    7 ISAYLPAIVRRRLETR------------------DSVEVPDTHNAEVVSMFADVSGFTALTESLAARGPSGA--EGLGKYLNSYFEQLLKLISSEGGDVFK 87          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11266.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKK5_ECTSI7.460e-3773.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
F0XWN7_AURAN3.310e-2146.49Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A2R5G8Z7_9STRA1.640e-1849.53Phosphodiesterase n=1 Tax=Hondaea fermentalgiana T... [more]
A0A8J2SL26_9STRA1.390e-1742.99Hypothetical protein n=4 Tax=Pelagomonas calceolat... [more]
A0A5A8CC48_CAFRO5.010e-1746.73Phosphodiesterase n=7 Tax=Cafeteria roenbergensis ... [more]
A0A0G4IWG7_PLABS1.720e-1650.00Phosphodiesterase n=1 Tax=Plasmodiophora brassicae... [more]
A0A482UEW8_9ARCH2.090e-1670.69Guanylate cyclase domain-containing protein n=1 Ta... [more]
A0A485LBZ0_9STRA9.830e-1340.38Aste57867_19187 protein n=1 Tax=Aphanomyces stella... [more]
A0A397ACA6_9STRA1.320e-1242.57Guanylate cyclase domain-containing protein (Fragm... [more]
W4H524_9STRA1.340e-1242.57Uncharacterized protein n=11 Tax=Aphanomyces astac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig11266contigC-tenellus_contig11266:3430..3899 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FKK5
PFAMsAAA_16,Guanylate_cyc,PH
Model size396
Max annot lvl2759|Eukaryota
KEGG rclassRC00295
KEGG koko:K11265
KEGG ReactionR00089,R00434
KEGG Pathwayko00230,ko04024,ko04371,ko04713,ko04714,map00230,map04024,map04371,map04713,map04714
Hectar predicted targeting categoryother localisation
Exons2
Evalue9.3e-38
EggNOG OGsCOG2114@1|root,2QPPT@2759|Eukaryota
EC4.6.1.1
DescriptionAdenylate cyclase
Cds size375
COG categoryT
BRITEko00000,ko00001,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789170.8536072-UTR-C-tenellus_contig11266:3429..34501680789170.8536072-UTR-C-tenellus_contig11266:3429..3450Choristocarpus tenellus KU2346UTRC-tenellus_contig11266 3430..3450 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789170.8673084-CDS-C-tenellus_contig11266:3450..35151680789170.8673084-CDS-C-tenellus_contig11266:3450..3515Choristocarpus tenellus KU2346CDSC-tenellus_contig11266 3451..3515 +
1680789170.87918-CDS-C-tenellus_contig11266:3589..38991680789170.87918-CDS-C-tenellus_contig11266:3589..3899Choristocarpus tenellus KU2346CDSC-tenellus_contig11266 3590..3899 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig11266.1.1prot_C-tenellus_contig11266.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig11266 3451..3899 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig11266.1.1

>prot_C-tenellus_contig11266.1.1 ID=prot_C-tenellus_contig11266.1.1|Name=mRNA_C-tenellus_contig11266.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=125bp
MRWIDTVASYLPSLIVQHLIDRMYERTDKQSSTPLAQCRTTSKELPRRQE
YETVCLFADVSGFTALSEAMMMSKESGAGVEGLAKHLNSYFGQMVRIIAS
EGGDVFKVIKKSIHYPVSTSIPSS*
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mRNA from alignment at C-tenellus_contig11266:3430..3899+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig11266.1.1 ID=mRNA_C-tenellus_contig11266.1.1|Name=mRNA_C-tenellus_contig11266.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=470bp|location=Sequence derived from alignment at C-tenellus_contig11266:3430..3899+ (Choristocarpus tenellus KU2346)
CGCTTCAAGCGATCCCTCATCATGAGGTGGATAGACACCGTCGCAAGCTA CCTTCCAAGTCTTATCGTCCAGCATCTCATCGACAGGTGATCTATGCCGT TTCCAGGCCGCCTGTGGCTGTCGAATTGATTTACCAGTGATTTTCCAATC GCGTTCCAAGGATGTACGAACGAACTGACAAACAGTCATCAACACCACTC GCACAATGCAGGACCACCAGCAAAGAGCTCCCGAGAAGGCAGGAATATGA AACGGTCTGCCTTTTCGCTGATGTATCGGGGTTTACGGCTCTGTCAGAGG CGATGATGATGTCGAAGGAGAGCGGAGCTGGGGTTGAGGGCTTAGCCAAA CATCTCAACTCGTATTTTGGACAGATGGTGCGCATCATCGCATCAGAGGG TGGCGACGTCTTCAAGGTGATAAAGAAATCCATACACTACCCCGTCTCTA CCTCCATACCATCCTCTTAA
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Coding sequence (CDS) from alignment at C-tenellus_contig11266:3430..3899+

>mRNA_C-tenellus_contig11266.1.1 ID=mRNA_C-tenellus_contig11266.1.1|Name=mRNA_C-tenellus_contig11266.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=375bp|location=Sequence derived from alignment at C-tenellus_contig11266:3430..3899+ (Choristocarpus tenellus KU2346)
ATGAGGTGGATAGACACCGTCGCAAGCTACCTTCCAAGTCTTATCGTCCA
GCATCTCATCGACAGGATGTACGAACGAACTGACAAACAGTCATCAACAC
CACTCGCACAATGCAGGACCACCAGCAAAGAGCTCCCGAGAAGGCAGGAA
TATGAAACGGTCTGCCTTTTCGCTGATGTATCGGGGTTTACGGCTCTGTC
AGAGGCGATGATGATGTCGAAGGAGAGCGGAGCTGGGGTTGAGGGCTTAG
CCAAACATCTCAACTCGTATTTTGGACAGATGGTGCGCATCATCGCATCA
GAGGGTGGCGACGTCTTCAAGGTGATAAAGAAATCCATACACTACCCCGT
CTCTACCTCCATACCATCCTCTTAA
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