mRNA_C-tenellus_contig11263.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig11263.1.1
Unique NamemRNA_C-tenellus_contig11263.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig11263.1.1 vs. uniprot
Match: D7FW50_ECTSI (Dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW50_ECTSI)

HSP 1 Score: 284 bits (726), Expect = 2.330e-85
Identity = 129/177 (72.88%), Postives = 152/177 (85.88%), Query Frame = 1
Query:    1 QGGKLVVYGGWANQWFSDGFTLDVGSIVGPPYAIMDLTPSNGAITGNTLLSIFGIDFINTEDIIVRFSNRKIHVDVEGTFVSQSKLTCVTPDFTESGILPGTVDVRVCLAGETFTTTKGNFTFFPVTNANMCFMFGPGILRGGVPDRETTFIIQARDSNNQDRHFGGDEFEISIFYL 531
            QGGKL++YGGWAN+WFSDGFTLDVGSIVGPPYA+MD+ P NG ITG TLL I GIDFINTED+ +RFS RK+ +DV GTFVSQ++LTC TP+FT +GI PGTVDVRVCLAGE+FTTTK  FTFFPVT+AN  FM+GP +L  GVP RET FIIQARD +N DR FGGD+F+++IF+L
Sbjct:  308 QGGKLILYGGWANRWFSDGFTLDVGSIVGPPYAVMDIIPDNGPITGETLLDIHGIDFINTEDVKIRFSYRKLFIDVRGTFVSQTRLTCSTPNFTNTGIPPGTVDVRVCLAGESFTTTKAKFTFFPVTDANFSFMYGPSLLEEGVPGRETMFIIQARDGSNHDRQFGGDQFDVNIFFL 484          
BLAST of mRNA_C-tenellus_contig11263.1.1 vs. uniprot
Match: A0A7S2QUS9_9STRA (Hypothetical protein n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QUS9_9STRA)

HSP 1 Score: 210 bits (534), Expect = 1.550e-59
Identity = 99/177 (55.93%), Postives = 132/177 (74.58%), Query Frame = 1
Query:    1 QGGKLVVYGGWANQWFSDGFTLDVGSIVGPPYAIMDLTPSNGAITGNTLLSIFGIDFINTEDIIVRFSNRKIHVDVEGTFVSQSKLTCVTPDFTESGILPGTVDVRVCLAGETFTTTKGNFTFFPVTNANMCFMFGPGILRGGVPDRETTFIIQARDSNNQDRHFGGDEFEISIFYL 531
            +G KL+++GGWAN+W++D + LDVGS+VGPPYAIMD+ P  G ITGNT + I GIDF+NT D++VRF+ +K +VDV+G + SQ+K+TCV+PD T     PG V+VRV L  ++FTTT   F+ F VT+A    M+GPGIL G   + ET FIIQARD NNQ+R  GGDEF ++I +L
Sbjct:  334 KGSKLIIFGGWANEWYNDVYMLDVGSVVGPPYAIMDIYPKLGPITGNTPIEITGIDFVNTADVVVRFATKKAYVDVKGVYSSQTKITCVSPDCTR--FPPGQVEVRVALNNDSFTTTFQPFSLFAVTDAAKSLMYGPGILSGCAVNEETMFIIQARDENNQNRTSGGDEFVVTIVHL 508          
BLAST of mRNA_C-tenellus_contig11263.1.1 vs. uniprot
Match: A0A482SZA8_9ARCH (IPT/TIG domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SZA8_9ARCH)

HSP 1 Score: 201 bits (510), Expect = 2.300e-56
Identity = 95/177 (53.67%), Postives = 128/177 (72.32%), Query Frame = 1
Query:    1 QGGKLVVYGGWANQWFSDGFTLDVGSIVGPPYAIMDLTPSNGAITGNTLLSIFGIDFINTEDIIVRFSNRKIHVDVEGTFVSQSKLTCVTPDFTESGILPGTVDVRVCLAGETFTTTKGNFTFFPVTNANMCFMFGPGILRGGVPDRETTFIIQARDSNNQDRHFGGDEFEISIFYL 531
            +G +L+++GGWA++W  D ++LDVG+IVGPPYAI D+ P+ G +TG T ++I GIDFINT +I+VRF N +  +DV G FVSQSK+ CV+P    S   PG +DVR+ L G++FTTT   F++FPVTN   C MFGPG+L G   + E +F+IQARD NNQ+R  GGDEF + I  L
Sbjct:  347 KGSRLLMFGGWADEWLGDFYSLDVGNIVGPPYAITDMYPNMGPVTGGTEVTIIGIDFINTTNIVVRFGNIRSSIDVPGVFVSQSKIVCVSP---VSKFPPGEIDVRISLEGDSFTTTFQKFSYFPVTNFVNCVMFGPGLLSGCAINEEVSFMIQARDDNNQNRTTGGDEFAVMISML 520          
BLAST of mRNA_C-tenellus_contig11263.1.1 vs. uniprot
Match: A0A812RYJ0_9DINO (ODA11 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812RYJ0_9DINO)

HSP 1 Score: 191 bits (485), Expect = 5.810e-53
Identity = 93/176 (52.84%), Postives = 127/176 (72.16%), Query Frame = 1
Query:    1 QGGKLVVYGGWANQWFSDGFTLDVGSIVGPPYAIMDLTPSNGAITGNTLLSIFGIDFINTEDIIVRFSNRKIHVDVEGTFVSQSKLTCVTPDFTESGILPGTVDVRVCLAGETFTTTKGNFTFFPVTNANMCFMFGPGILRGGVPDRETT--FIIQARDSNNQDRHFGGDEFEISI 522
            +G +LV++GGWAN WF+D +TLDVG    PPYAIMD+ P  G ITG T +++ GIDF+NT+D++VRFS +K + DV+G FVS +++T V+P F   G+  G VDVRV L G++FTTT   FTFF VT+A+ C  FGPGIL GG+  R     F+IQARD+ N+ R  G DEF++++
Sbjct:  237 KGSRLVIFGGWANDWFNDVYTLDVG----PPYAIMDMEPRMGPITGGTPVTLIGIDFVNTDDVVVRFSTKKGYEDVKGKFVSDTEITAVSPSFERLGV--GEVDVRVSLNGDSFTTTFKKFTFFSVTDASKCLAFGPGILDGGLASRSCPVYFVIQARDAMNKPRTTGEDEFDVNV 406          
BLAST of mRNA_C-tenellus_contig11263.1.1 vs. uniprot
Match: A0A1V9YGX8_9STRA (Dynein heavy chain n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YGX8_9STRA)

HSP 1 Score: 176 bits (447), Expect = 7.750e-48
Identity = 91/180 (50.56%), Postives = 119/180 (66.11%), Query Frame = 1
Query:    1 QGGKLVVYGGWANQWFSDGFTLDVGSIVGPPYAIMDLTPSNGAITGNTLLSIFGIDFINTEDIIVRFSNRKIHVDVEGTFVSQSKLTCVTPDFTESGILPGTVDVRVCLAGETFTTTKGNFTFFPVTNANMCFMFGPGILRGGVPDRETTFIIQARDSNNQDRHFGGDEFEISIFYLPED 540
            +G +L++ GGWAN WF+D F LDV S+VGPPYAI  + PS GAITG TLL+I GIDF+  + +IVRFS RK  +DV GT+V++  LT VTPD+  S   PG V VRV L G++FTTT   F FF VT+A+    +GPG+L G        F++QA D     R  GGDEF +++  L +D
Sbjct:  325 KGSRLLICGGWANFWFNDVFALDVSSVVGPPYAITGIFPSFGAITGGTLLTIEGIDFV-PKAVIVRFSCRKGTLDVSGTYVNEQTLTVVTPDY--SNFPPGDVQVRVALQGDSFTTTSQTFNFFAVTSASTTLAYGPGVLSGAATAEPVVFLLQACDGAGNFRSRGGDEFAVTVRCLADD 501          
BLAST of mRNA_C-tenellus_contig11263.1.1 vs. uniprot
Match: T0SA98_SAPDV (IPT/TIG domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0SA98_SAPDV)

HSP 1 Score: 176 bits (445), Expect = 1.440e-47
Identity = 92/180 (51.11%), Postives = 117/180 (65.00%), Query Frame = 1
Query:    1 QGGKLVVYGGWANQWFSDGFTLDVGSIVGPPYAIMDLTPSNGAITGNTLLSIFGIDFINTEDIIVRFSNRKIHVDVEGTFVSQSKLTCVTPDFTESGILPGTVDVRVCLAGETFTTTKGNFTFFPVTNANMCFMFGPGILRGGVPDRETTFIIQARDSNNQDRHFGGDEFEISIFYLPED 540
            +G +L++ GGWAN W +D F LDV  +VGPPYAI  L P+ GAITG TLL+I GIDF++   +IVRF+ RK  +DV GTFVS+  LT VTPD+  SG  PG V VRV L G++FTTT   F FF VT+A    +FGPG+L G        F++QA D     R  GGD F I++  L +D
Sbjct:  326 KGSRLLICGGWANSWLNDVFALDVSCVVGPPYAITGLFPTFGAITGGTLLTIEGIDFVS-RPVIVRFACRKGTLDVAGTFVSEEMLTVVTPDY--SGFPPGDVQVRVALQGDSFTTTSQTFNFFAVTSAATSLVFGPGVLSGAAISEPVAFVVQACDGAGNVRTRGGDAFGITVRCLADD 502          
BLAST of mRNA_C-tenellus_contig11263.1.1 vs. uniprot
Match: A0A485LTF1_9STRA (Aste57867_25292 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LTF1_9STRA)

HSP 1 Score: 174 bits (441), Expect = 4.970e-47
Identity = 89/180 (49.44%), Postives = 120/180 (66.67%), Query Frame = 1
Query:    1 QGGKLVVYGGWANQWFSDGFTLDVGSIVGPPYAIMDLTPSNGAITGNTLLSIFGIDFINTEDIIVRFSNRKIHVDVEGTFVSQSKLTCVTPDFTESGILPGTVDVRVCLAGETFTTTKGNFTFFPVTNANMCFMFGPGILRGGVPDRETTFIIQARDSNNQDRHFGGDEFEISIFYLPED 540
            +G +L+V+GGWAN WF+D F+LDV  +VGPPYAI  + PS GAITG  +L++ GIDF N + ++VRFS RK  +DV GT+V+   LT  TPDF  S   PG V +RV L G++FTTT   F FF VT+A     FG G+L GG      TF+++A D+N   R  GGDEF+++I  + +D
Sbjct:  341 KGSRLLVFGGWANLWFNDLFSLDVSCVVGPPYAITGVRPSFGAITGGLVLTLEGIDFAN-KPVVVRFSCRKGTIDVPGTYVNDQTLTATTPDF--SMFPPGDVQIRVALQGDSFTTTFQTFNFFAVTSAAKTLAFGAGVLSGGAAGEPITFLLRACDANGHHRLRGGDEFQVAIRSVGDD 517          
BLAST of mRNA_C-tenellus_contig11263.1.1 vs. uniprot
Match: A0A7S1Y1F5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1Y1F5_9STRA)

HSP 1 Score: 147 bits (370), Expect = 5.150e-42
Identity = 64/121 (52.89%), Postives = 94/121 (77.69%), Query Frame = 1
Query:   10 KLVVYGGWANQWFSDGFTLDVGSIVGPPYAIMDLTPSNGAITGNTLLSIFGIDFINTEDIIVRFSNRKIHVDVEGTFVSQSKLTCVTPDFTESGILPGTVDVRVCLAGETFTTTKGNFTFF 372
            K+VV+GGWANQW+ D + LDVG++VGPPYA+MD+ P+ G ITG T + + GIDF+NT+++++RF+++K  +DV+GTFVS + LTC +PDF+E       +DVRV L G++FTTT   +T+F
Sbjct:   29 KIVVFGGWANQWYGDVYALDVGAVVGPPYAVMDIYPAMGPITGGTEIELTGIDFVNTDNVVIRFASKKHSIDVKGTFVSSTMLTCKSPDFSEFPAQD--IDVRVALDGDSFTTTFQRYTYF 147          
BLAST of mRNA_C-tenellus_contig11263.1.1 vs. uniprot
Match: A0A2R5G0U4_9STRA (Dynein heavy chain 9, axonemal n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G0U4_9STRA)

HSP 1 Score: 154 bits (390), Expect = 3.560e-40
Identity = 80/185 (43.24%), Postives = 109/185 (58.92%), Query Frame = 1
Query:    1 QGGKLVVYGGWANQWFSDGFTLDVGSIVGPPYAIMDLTPSNGAITGNTLLSIFGIDFI---NTEDIIVRFSNRKIHV-DVEGTFVSQSKLTCVTPDFTESGILPGTV-------DVRVCLAGETFTTTKGNFTFFPVTNANMCFMFGPGILRGGVPDRETTFIIQARDSNNQDRHFGGDEFEISI 522
            +G +LV++GGWANQW  D FTLDVG +VGPPY+I+ + P  G +TG T L+I G+DF+   N   I VRF  +  ++ D  G FV+   +TC++PDF    +L G V       DVRV    ++FT T   FTF  VT A  C  +GPG++ GG P   T F++ A D     R  GGDEF + +
Sbjct:  423 KGSRLVMFGGWANQWLDDIFTLDVGCVVGPPYSILGVFPRQGPLTGGTELTISGLDFVHDPNDPRIKVRFIAKGGYILDAPGNFVNGETITCISPDF--DSLLQGDVHAAQFEVDVRVAFRDDSFTVTSQKFTFITVTVAEACLAYGPGLIDGGCPGVPTMFVVHANDVTGSQRATGGDEFVVRV 605          
BLAST of mRNA_C-tenellus_contig11263.1.1 vs. uniprot
Match: A0A5A8EH26_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EH26_CAFRO)

HSP 1 Score: 145 bits (365), Expect = 8.140e-37
Identity = 70/175 (40.00%), Postives = 102/175 (58.29%), Query Frame = 1
Query:   10 KLVVYGGWANQWFSDGFTLDVGSIVGPPYAIMDLTPSNGAITGNTLLSIFGIDFINTEDIIVRFSNRKIHVDVEGTFVSQSKLTCVTPDFTESGILPGTVDVRVCLAGETFTTTKGNFTFFPVTNANMCFMFGPGILRGGVPDRETTFIIQARDSNNQDRHFGGDEFEISIFYLP 534
            +LVV+GGWAN+W  D  +LD   IVGPPYA++ + P+ G ITG T L++ G+ F     + VRF   + H +V  T +    L CV+PD   +G+ PG   VRV + G  +T T   F  F VT+      FGPG+L G    R   FII+++D+ ++ R  GGDEF++++   P
Sbjct:  369 RLVVFGGWANRWLGDAHSLDASLIVGPPYAVLSVEPALGPITGGTTLTVKGMGFTTDMPMAVRFMLGRRHAEVSATVLDDETLECVSPDL--AGVGPGVTQVRVAVRGSPYTITGEPFQVFRVTSPASTLAFGPGVLGGLAAGRPAQFIIRSKDTGDEPRTTGGDEFDVTVSVRP 541          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11263.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FW50_ECTSI2.330e-8572.88Dynein heavy chain n=1 Tax=Ectocarpus siliculosus ... [more]
A0A7S2QUS9_9STRA1.550e-5955.93Hypothetical protein n=1 Tax=Triparma pacifica Tax... [more]
A0A482SZA8_9ARCH2.300e-5653.67IPT/TIG domain-containing protein n=1 Tax=archaeon... [more]
A0A812RYJ0_9DINO5.810e-5352.84ODA11 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A1V9YGX8_9STRA7.750e-4850.56Dynein heavy chain n=1 Tax=Achlya hypogyna TaxID=1... [more]
T0SA98_SAPDV1.440e-4751.11IPT/TIG domain-containing protein n=1 Tax=Saproleg... [more]
A0A485LTF1_9STRA4.970e-4749.44Aste57867_25292 protein n=1 Tax=Aphanomyces stella... [more]
A0A7S1Y1F5_9STRA5.150e-4252.89Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A2R5G0U4_9STRA3.560e-4043.24Dynein heavy chain 9, axonemal n=1 Tax=Hondaea fer... [more]
A0A5A8EH26_CAFRO8.140e-3740.00Uncharacterized protein n=3 Tax=Cafeteria roenberg... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig11263contigC-tenellus_contig11263:3364..4876 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FW50
Preferred nameODA-DHCA
PFAMsAAA_5,AAA_6,AAA_7,AAA_8,AAA_9,DHC_N2,Dynein_heavy,Filamin,Kelch_2,Kelch_4,Kelch_5,MT,TIG
Model size546
Max annot lvl2759|Eukaryota
KEGG koko:K10408,ko:K10706,ko:K20285
KEGG Pathwayko05016,map05016
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005623,GO:0005929,GO:0031514,GO:0042995,GO:0043226,GO:0044464,GO:0120025
Exons3
Evalue3.83e-86
EggNOG OGsCOG5245@1|root,KOG1230@1|root,KOG1230@2759|Eukaryota,KOG3595@2759|Eukaryota
Descriptiondynein light chain binding
Cds size546
COG categoryZ
BRITEko00000,ko00001,ko01000,ko03021,ko04131,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789170.6661499-CDS-C-tenellus_contig11263:3363..34471680789170.6661499-CDS-C-tenellus_contig11263:3363..3447Choristocarpus tenellus KU2346CDSC-tenellus_contig11263 3364..3447 -
1680789170.6759734-CDS-C-tenellus_contig11263:4159..44291680789170.6759734-CDS-C-tenellus_contig11263:4159..4429Choristocarpus tenellus KU2346CDSC-tenellus_contig11263 4160..4429 -
1680789170.6847289-CDS-C-tenellus_contig11263:4684..48761680789170.6847289-CDS-C-tenellus_contig11263:4684..4876Choristocarpus tenellus KU2346CDSC-tenellus_contig11263 4685..4876 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig11263.1.1prot_C-tenellus_contig11263.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig11263 3364..4876 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig11263.1.1

>prot_C-tenellus_contig11263.1.1 ID=prot_C-tenellus_contig11263.1.1|Name=mRNA_C-tenellus_contig11263.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=182bp
QGGKLVVYGGWANQWFSDGFTLDVGSIVGPPYAIMDLTPSNGAITGNTLL
SIFGIDFINTEDIIVRFSNRKIHVDVEGTFVSQSKLTCVTPDFTESGILP
GTVDVRVCLAGETFTTTKGNFTFFPVTNANMCFMFGPGILRGGVPDRETT
FIIQARDSNNQDRHFGGDEFEISIFYLPEDDP
back to top

mRNA from alignment at C-tenellus_contig11263:3364..4876-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig11263.1.1 ID=mRNA_C-tenellus_contig11263.1.1|Name=mRNA_C-tenellus_contig11263.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1513bp|location=Sequence derived from alignment at C-tenellus_contig11263:3364..4876- (Choristocarpus tenellus KU2346)
CAGGGGGGCAAGCTTGTCGTCTACGGCGGTTGGGCGAATCAATGGTTTAG CGACGGTTTCACATTGGATGTTGGATCTATAGTTGGGCCGCCCTATGCCA TCATGGACCTGACCCCTAGCAACGGGGCGATTACAGGCAACACCCTGCTG AGTATATTCGGGATCGACTTCATCAACACGGAGGACATCATCGTGAGTTG CTTATATCCTTGGACCTATTCTTTCTTGCACATACCATCGTAGCTTTCTC AAAGGTCAACTTCTTGTCTTCCTCATCGAGTATTACAAATCGCGCAAATA CAACGCATCCATGGCATGGAGAGCAAATTCAGTTACACTACCAGAACTGC TGCTCACTGCTTCATAAGATTTAACAACGGAGGCTTTGAGACCTACCTAC TGTCCAAGCACCTCTCCGTCCCATTCTTGACTCCCCCCCCCTTCCAGGTA AGATTCTCGAACCGGAAGATACATGTGGATGTGGAGGGCACATTTGTGAG TCAGTCAAAGCTGACTTGTGTCACGCCTGACTTCACCGAGTCAGGGATCC TTCCGGGAACAGTCGACGTTCGTGTTTGTCTAGCAGGGGAGACTTTCACC ACTACCAAGGGAAACTTCACCTTCTTCCCCGTAACAAATGCCAATATGTG CTTTATGTTCGGACCAGGAATCCTGCGAGGGGGTGTTCCTGATCGGGAGA CTACCTTCATCATTCAGGTGCAACGTCTACATACCTCCTTGGATACTTAA TGTCTGGCGTTCCTTAAGAGTACTCTGCTGCTGGGAGTGGTATTGGTGTC GATACTGTTTTTATGGGGTTGGCCTCCCACTCACTGAATCATCTTGACGT GGGAAGGTGCGGCACCTGAAAGGGACCCATAGTATCCTAGAGGGTGAGGG GTGGGGGGGGAGACCAGGTTGTCTATTCGGAGCTTGATGGACTTTTGAAA AATATCTCAGTATGAATCCTGTTTTGAGTTTCCTTAAGATTTGGTCCAGG CAGCGGGATGGAAAAAGAAGATGCATCCAGACGAAGGAAACATCCCTTTT GATCTGACACGATAACTCGTATGACATGAAAATTACTGCAGAGAGGATGC ATTAACTCCCGTCTAGGATACTATGGACGTGAAACCGTGATGGCAACGGT ATGACAAGAGCACAAGTCTGTTGTAAGAGTTCGAGTTGAGTGTAATGGGT TCTATTACATACAGGCCCAAGCATACTTAGGCACTTTCTATCTGTTAGGG TTAGGGTTAGGGCTGAGCCTCATAGAATACTTGATTTTGTCCCCTTAATT AATGCAAGCAATACATGTTGCGCACGCAATGCTACACCCGAGCCTTTGTC CTGTTCACATGTTGGTAATGCTGCTGTATCAGACTGACCTGGTATACTCT ACCTTGTATGTTTCACATTTTTGTTATAGGCAAGGGATAGCAATAATCAA GATCGTCACTTTGGAGGAGATGAGTTTGAAATAAGTATTTTTTACCTGCC TGAAGATGACCCA
back to top

Coding sequence (CDS) from alignment at C-tenellus_contig11263:3364..4876-

>mRNA_C-tenellus_contig11263.1.1 ID=mRNA_C-tenellus_contig11263.1.1|Name=mRNA_C-tenellus_contig11263.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=546bp|location=Sequence derived from alignment at C-tenellus_contig11263:3364..4876- (Choristocarpus tenellus KU2346)
CAGGGGGGCAAGCTTGTCGTCTACGGCGGTTGGGCGAATCAATGGTTTAG
CGACGGTTTCACATTGGATGTTGGATCTATAGTTGGGCCGCCCTATGCCA
TCATGGACCTGACCCCTAGCAACGGGGCGATTACAGGCAACACCCTGCTG
AGTATATTCGGGATCGACTTCATCAACACGGAGGACATCATCGTAAGATT
CTCGAACCGGAAGATACATGTGGATGTGGAGGGCACATTTGTGAGTCAGT
CAAAGCTGACTTGTGTCACGCCTGACTTCACCGAGTCAGGGATCCTTCCG
GGAACAGTCGACGTTCGTGTTTGTCTAGCAGGGGAGACTTTCACCACTAC
CAAGGGAAACTTCACCTTCTTCCCCGTAACAAATGCCAATATGTGCTTTA
TGTTCGGACCAGGAATCCTGCGAGGGGGTGTTCCTGATCGGGAGACTACC
TTCATCATTCAGGCAAGGGATAGCAATAATCAAGATCGTCACTTTGGAGG
AGATGAGTTTGAAATAAGTATTTTTTACCTGCCTGAAGATGACCCA
back to top