mRNA_C-tenellus_contig11260.3.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig11260.3.1 vs. uniprot
Match: A0A8J2WSX8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WSX8_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 8.420e-16 Identity = 39/62 (62.90%), Postives = 42/62 (67.74%), Query Frame = 1 Query: 7 GNDPFAGSLTETLLRLHLPLNIELDITSHGVAAVKPPQNGPESSPKHSISRCNGRCVQRAGT 192 GNDP AGS TETLLRLHLPLN EL ++ PE SP HSI RC+GRCVQRAGT Sbjct: 41 GNDPSAGSPTETLLRLHLPLNSELACSN------------PEISPNHSIGRCDGRCVQRAGT 90
BLAST of mRNA_C-tenellus_contig11260.3.1 vs. uniprot
Match: F0XYK3_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYK3_AURAN) HSP 1 Score: 72.8 bits (177), Expect = 2.060e-15 Identity = 40/63 (63.49%), Postives = 41/63 (65.08%), Query Frame = 1 Query: 4 IGNDPFAGSLTETLLRLHLPLNIELDITSHGVAAVKPPQNGPESSPKHSISRCNGRCVQRAGT 192 I NDP AGS TETLLRLHLPLN EL S PE SP HSI RC+GRCVQRAGT Sbjct: 34 ISNDPSAGSPTETLLRLHLPLNSELANPS------------PEVSPNHSIGRCDGRCVQRAGT 84
BLAST of mRNA_C-tenellus_contig11260.3.1 vs. uniprot
Match: F0XYG7_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYG7_AURAN) HSP 1 Score: 71.2 bits (173), Expect = 8.360e-15 Identity = 39/61 (63.93%), Postives = 40/61 (65.57%), Query Frame = 1 Query: 10 NDPFAGSLTETLLRLHLPLNIELDITSHGVAAVKPPQNGPESSPKHSISRCNGRCVQRAGT 192 NDP AGS TETLLRLHLPLN EL S PE SP HSI RC+GRCVQRAGT Sbjct: 36 NDPSAGSPTETLLRLHLPLNSELANPS------------PEVSPNHSIGRCDGRCVQRAGT 84
BLAST of mRNA_C-tenellus_contig11260.3.1 vs. uniprot
Match: A0A6N2KFT6_SALVM (Uncharacterized protein n=1 Tax=Salix viminalis TaxID=40686 RepID=A0A6N2KFT6_SALVM) HSP 1 Score: 73.2 bits (178), Expect = 1.400e-13 Identity = 39/62 (62.90%), Postives = 46/62 (74.19%), Query Frame = 1 Query: 10 NDPFAGSLTETLLRLHLPLNIELDITSHGVAAVKPPQN-GPESSPKHSISRCNGRCVQRAGT 192 NDP AGS TETLLRL LPLN ++ TS VA+ +PP+ P +SP HSI R +GRCVQRAGT Sbjct: 1237 NDPSAGSPTETLLRLLLPLNDKVQWTSRDVASGEPPRRRDPNTSPDHSIGRSDGRCVQRAGT 1298
BLAST of mRNA_C-tenellus_contig11260.3.1 vs. uniprot
Match: A0A6A1WDF0_9ROSI (Uncharacterized protein n=1 Tax=Morella rubra TaxID=262757 RepID=A0A6A1WDF0_9ROSI) HSP 1 Score: 71.6 bits (174), Expect = 4.800e-13 Identity = 39/62 (62.90%), Postives = 43/62 (69.35%), Query Frame = 1 Query: 10 NDPFAGSLTETLLRLHLPLNIELDITSHGVAAVKPPQN-GPESSPKHSISRCNGRCVQRAGT 192 NDP AGS TETLLRL LPLN ++ TS VAA P P +SP HSI R +GRCVQRAGT Sbjct: 492 NDPSAGSPTETLLRLLLPLNDKVQWTSQNVAAANRPHRLDPNTSPDHSIGRSDGRCVQRAGT 553
BLAST of mRNA_C-tenellus_contig11260.3.1 vs. uniprot
Match: A0A2G2V2R3_CAPBA (Protein TAR1 n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2V2R3_CAPBA) HSP 1 Score: 68.9 bits (167), Expect = 3.890e-12 Identity = 40/73 (54.79%), Postives = 44/73 (60.27%), Query Frame = 1 Query: 10 NDPFAGSLTETLLRLHLPLNIELDITSHGVAAVKPP------------QNGPESSPKHSISRCNGRCVQRAGT 192 NDPFAGS TETLLRL L LN +L TS VA +PP + P SP HSI R +GRCVQRAGT Sbjct: 311 NDPFAGSPTETLLRLLLSLNDKLQWTSRDVAGSEPPTXATSRAANRPRRRDPNISPDHSIGRSDGRCVQRAGT 383
BLAST of mRNA_C-tenellus_contig11260.3.1 vs. uniprot
Match: R1BK99_EMIHU (Uncharacterized protein (Fragment) n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BK99_EMIHU) HSP 1 Score: 64.7 bits (156), Expect = 4.450e-12 Identity = 35/62 (56.45%), Postives = 41/62 (66.13%), Query Frame = 1 Query: 7 GNDPFAGSLTETLLRLHLPLNIELDITSHGVAAVKPPQNGPESSPKHSISRCNGRCVQRAGT 192 GNDP AGS TETL RL LPLN ++ S G+ + P +SP HSI R +GRCVQRAGT Sbjct: 41 GNDPSAGSPTETLSRLLLPLNDKVRTASRGLR-----RRSPGASPDHSIGRSDGRCVQRAGT 97
BLAST of mRNA_C-tenellus_contig11260.3.1 vs. uniprot
Match: A0A8K0GTJ8_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0GTJ8_9ROSA) HSP 1 Score: 67.8 bits (164), Expect = 5.690e-12 Identity = 38/62 (61.29%), Postives = 43/62 (69.35%), Query Frame = 1 Query: 10 NDPFAGSLTETLLRLHLPLNIELDITSHGVAAVKPPQ-NGPESSPKHSISRCNGRCVQRAGT 192 NDP AGS TETLLRL LPLN ++ TS VA +PP +SP HSI R +GRCVQRAGT Sbjct: 208 NDPSAGSPTETLLRLLLPLNDKVQWTSCDVAGSEPPTPTQSNTSPDHSIGRSDGRCVQRAGT 269
BLAST of mRNA_C-tenellus_contig11260.3.1 vs. uniprot
Match: A0A507BW73_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507BW73_9FUNG) HSP 1 Score: 63.9 bits (154), Expect = 1.200e-11 Identity = 37/64 (57.81%), Postives = 39/64 (60.94%), Query Frame = -2 Query: 3 YVPALCTHRPLHLLIECFGEDSGPFCGGFTAATPWEVISSSIFRGR*SRNKVSVNEPAKGSLPI 194 YVPALCTHRP L IE E SG FTA EV + FRG SRNKV+V EPA GSL I Sbjct: 31 YVPALCTHRPSLLPIEWLSETSGLSYWCFTALVFREVGQTWSFRGSKSRNKVTVGEPAVGSLHI 94
BLAST of mRNA_C-tenellus_contig11260.3.1 vs. uniprot
Match: A0A6N2K376_SALVM (Uncharacterized protein (Fragment) n=1 Tax=Salix viminalis TaxID=40686 RepID=A0A6N2K376_SALVM) HSP 1 Score: 65.9 bits (159), Expect = 5.060e-11 Identity = 35/60 (58.33%), Postives = 38/60 (63.33%), Query Frame = 2 Query: 5 SVMILLQVH*RKPCYDFTFL*ILNLI*LPTGWQP*SPRKTDRNLHQNIQSVGAMGGVYKG 184 S MIL QVH RKPCYDF+ L L L T PR+ R LH+ IQSVGA GGVYKG Sbjct: 1194 STMILPQVHLRKPCYDFSSLMFSGL--LATSPAANRPRRAIRTLHRTIQSVGATGGVYKG 1251 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11260.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig11260.3.1 >prot_C-tenellus_contig11260.3.1 ID=prot_C-tenellus_contig11260.3.1|Name=mRNA_C-tenellus_contig11260.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=65bp MIGNDPFAGSLTETLLRLHLPLNIELDITSHGVAAVKPPQNGPESSPKHSback to top mRNA from alignment at C-tenellus_contig11260:4750..4944+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig11260.3.1 ID=mRNA_C-tenellus_contig11260.3.1|Name=mRNA_C-tenellus_contig11260.3.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=195bp|location=Sequence derived from alignment at C-tenellus_contig11260:4750..4944+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig11260:4750..4944+ >mRNA_C-tenellus_contig11260.3.1 ID=mRNA_C-tenellus_contig11260.3.1|Name=mRNA_C-tenellus_contig11260.3.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=195bp|location=Sequence derived from alignment at C-tenellus_contig11260:4750..4944+ (Choristocarpus tenellus KU2346)back to top |