mRNA_C-tenellus_contig1126.5.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig1126.5.1 vs. uniprot
Match: D7G1U8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U8_ECTSI) HSP 1 Score: 151 bits (381), Expect = 5.600e-42 Identity = 73/105 (69.52%), Postives = 83/105 (79.05%), Query Frame = 1 Query: 40 SANGTGEVTLKYEMYDEKFPIEDGSITAAAIDDIYCLSFAMPNCTLHLGYLSPSDHYASEAEGVGMHYLHEDPAGTFCGLEGGGTYWVYVSQDAEEEAKDRERMK 354 + G GEVTL YEMYDEKFPI+DGSI+AA ID+ YCLSF MPNCTLHLG L P+D YA E EG + YL E+P+GTF GLE G YWVYVS+D EEE +DRERMK Sbjct: 224 TGRGDGEVTLMYEMYDEKFPIKDGSISAAEIDETYCLSFVMPNCTLHLGPLGPADRYARENEGELVPYLEENPSGTFHGLEDGEVYWVYVSRDDEEEKQDRERMK 328
BLAST of mRNA_C-tenellus_contig1126.5.1 vs. uniprot
Match: A0A1V9YWC1_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YWC1_9STRA) HSP 1 Score: 114 bits (286), Expect = 7.510e-29 Identity = 57/100 (57.00%), Postives = 71/100 (71.00%), Query Frame = 1 Query: 55 GEVTLKYEMYDEKFPIEDGSITAAAIDDIYCLSFAMPNCTLHLGYLSPSDHYASEAEGVGMHYLHEDPAGTFCGLEGGGTYWVYVSQDAEEEAKDRERMK 354 G V LKYEMYDE FPI DGS T AAIDD+Y L+F MPNC +HL L P A+EA GV + Y+ E P GT+ LE G TY+VYV Q+AE+ A+D+ +M+ Sbjct: 132 GNVILKYEMYDEAFPIVDGSTTMAAIDDVYALTFVMPNCLVHLSRLDPPSKVAAEASGVDV-YIKELPEGTYQDLEAGETYYVYVEQEAEQLARDQAKMR 230
BLAST of mRNA_C-tenellus_contig1126.5.1 vs. uniprot
Match: T0R6Z3_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R6Z3_SAPDV) HSP 1 Score: 107 bits (267), Expect = 5.410e-26 Identity = 52/100 (52.00%), Postives = 66/100 (66.00%), Query Frame = 1 Query: 55 GEVTLKYEMYDEKFPIEDGSITAAAIDDIYCLSFAMPNCTLHLGYLSPSDHYASEAEGVGMHYLHEDPAGTFCGLEGGGTYWVYVSQDAEEEAKDRERMK 354 G + LKYEMY E+FPI DGS T AAIDD+Y L+F MPNC +HL P E+ Y+ EDP GT+ LE G TY+VYV Q+AE+ AKD+ +M+ Sbjct: 136 GNIILKYEMYCEEFPIIDGSTTMAAIDDVYALTFVMPNCLVHLSTYDPPTKIEIESRDPTAVYVREDPIGTYQDLEAGATYYVYVEQEAEQLAKDQAKMR 235
BLAST of mRNA_C-tenellus_contig1126.5.1 vs. uniprot
Match: A0A067D9L5_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067D9L5_SAPPC) HSP 1 Score: 106 bits (265), Expect = 6.650e-26 Identity = 52/105 (49.52%), Postives = 67/105 (63.81%), Query Frame = 1 Query: 40 SANGTGEVTLKYEMYDEKFPIEDGSITAAAIDDIYCLSFAMPNCTLHLGYLSPSDHYASEAEGVGMHYLHEDPAGTFCGLEGGGTYWVYVSQDAEEEAKDRERMK 354 +A G V LKYEMY E+FPI +GS T AAIDD+Y L+F MPNC +HL P E+ Y+ EDP GT+ LE G TY+VY Q+AE+ AKD+ +M+ Sbjct: 107 AAKRNGTVILKYEMYSEEFPIVEGSTTMAAIDDVYALTFVMPNCLIHLSRWDPPTKVEMESRDAMNVYVREDPIGTYQDLEAGETYYVYAEQEAEQLAKDQAKMR 211
BLAST of mRNA_C-tenellus_contig1126.5.1 vs. uniprot
Match: A0A1V9ZX09_9STRA (Lysosomal Cystine Transporter (LCT) Family n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZX09_9STRA) HSP 1 Score: 107 bits (268), Expect = 7.630e-25 Identity = 56/117 (47.86%), Postives = 74/117 (63.25%), Query Frame = 1 Query: 4 ISAMEEPRETTSSANGTGEVTLKYEMYDEKFPIEDGSITAAAIDDIYCLSFAMPNCTLHLGYLSPSDHYASEAEGVGMHYLHEDPAGTFCGLEGGGTYWVYVSQDAEEEAKDRERMK 354 +S+ +E + N G V LKYEMY+E FPI +GS T A IDDIY L+F MPNC +HL P+ A E+ G Y+ EDP GT+ LE TY+VYV Q+ E+ AKD+E+M+ Sbjct: 404 VSSSDEVVKAEIIKNQNGNVVLKYEMYEELFPIVNGSTTMANIDDIYALTFVMPNCLVHLSKYDPTTKLAMESTGNLDLYVKEDPVGTYQELEADCTYYVYVEQEGEQLAKDQEKMR 520
BLAST of mRNA_C-tenellus_contig1126.5.1 vs. uniprot
Match: A0A7S4SJU9_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4SJU9_9DINO) HSP 1 Score: 102 bits (254), Expect = 2.280e-24 Identity = 53/105 (50.48%), Postives = 67/105 (63.81%), Query Frame = 1 Query: 40 SANGTGEVTLKYEMYDEKFPIEDGSITAAAIDDIYCLSFAMPNCTLHLGYLSPSDHYASEAEGVGMHYLHEDPAGTFCGLEGGGTYWVYVSQDAEEEAKDRERMK 354 +A GEVT+KY MY EKF IE+ ++TAAA+D++YCLS MP C +HLG Y E Y+ EDP G+F GL G TYW YV QD E+E +D+E MK Sbjct: 96 AALANGEVTIKYSMYAEKFKIENHTLTAAAVDELYCLSDIMPGCFIHLG--EKEFGYGEEHA-----YIKEDPPGSFRGLMSGETYWCYVQQDPEQEKRDQEAMK 193
BLAST of mRNA_C-tenellus_contig1126.5.1 vs. uniprot
Match: A0A813IAW0_POLGL (Hypothetical protein (Fragment) n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813IAW0_POLGL) HSP 1 Score: 102 bits (253), Expect = 2.770e-24 Identity = 52/100 (52.00%), Postives = 65/100 (65.00%), Query Frame = 1 Query: 55 GEVTLKYEMYDEKFPIEDGSITAAAIDDIYCLSFAMPNCTLHLGYLSPSDHYASEAEGVGMHYLHEDPAGTFCGLEGGGTYWVYVSQDAEEEAKDRERMK 354 GEVT+KY MYDEKF +E+ + A ID++YCLS MP C +HLG +A E V Y+ EDP GTF GL G TYW YV QD+E+E KD+E M+ Sbjct: 96 GEVTIKYNMYDEKFKVENHMLKAEVIDELYCLSDVMPGCFIHLG----EKQFAYGEEQV---YVKEDPPGTFKGLMAGETYWCYVQQDSEQENKDQEAMR 188
BLAST of mRNA_C-tenellus_contig1126.5.1 vs. uniprot
Match: A0A2D4BJT7_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BJT7_PYTIN) HSP 1 Score: 99.0 bits (245), Expect = 1.550e-23 Identity = 50/103 (48.54%), Postives = 65/103 (63.11%), Query Frame = 1 Query: 46 NGTGEVTLKYEMYDEKFPIEDGSITAAAIDDIYCLSFAMPNCTLHLGYLSPSDHYASEAEGVGMHYLHEDPAGTFCGLEGGGTYWVYVSQDAEEEAKDRERMK 354 NG G V L YE YDE FPIEDGS T A IDD+YCLSF MPNC +HL + + + E GV + E+P G + GL TY+V V Q+A++ +D+E+ K Sbjct: 58 NGNGMVKLIYEQYDELFPIEDGSTTQANIDDVYCLSFVMPNCLVHLSHHPNVERFERENAGVFDSLVLENPRGVYQGLVKDTTYYVVVEQEADQLKRDQEKAK 160
BLAST of mRNA_C-tenellus_contig1126.5.1 vs. uniprot
Match: A0A6G0W707_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W707_9STRA) HSP 1 Score: 103 bits (256), Expect = 2.320e-23 Identity = 51/102 (50.00%), Postives = 68/102 (66.67%), Query Frame = 1 Query: 52 TGEVTLKYEMYDEKFPIEDGSITAAAIDDIYCLSFAMPNCTLHLGYLSPSDHYASEAEG-VGMHYLHEDPAGTFCGLEGGGTYWVYVSQDAEEEAKDRERMK 354 TG V LKYEMY E F IE GS+T AID+ YCLSF MPNC +HL P+ A E++G +LHE+P GT+ GL+ TY+VY+ Q+A++ A D+ M+ Sbjct: 341 TGNVVLKYEMYSESFVIEKGSMTGTAIDEAYCLSFVMPNCRIHLSMHEPAMKLALESQGDTDNVFLHEEPPGTYHGLQVDQTYYVYIEQEADQLAWDQAHMR 442
BLAST of mRNA_C-tenellus_contig1126.5.1 vs. uniprot
Match: A0A813LJX8_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813LJX8_POLGL) HSP 1 Score: 99.4 bits (246), Expect = 4.100e-23 Identity = 46/97 (47.42%), Postives = 66/97 (68.04%), Query Frame = 1 Query: 55 GEVTLKYEMYDEKFPIEDGSITAAAIDDIYCLSFAMPNCTLHLGYLSPSDHYASEAEGVGMHYLHEDPAGTFCGLEGGGTYWVYVSQDAEEEAKDRE 345 GEV+L+Y MY+E+FPI G TA AID++Y L+ MP C +HL LSP + Y ++A+ + + Y+ E+PAG F GL+ G Y+VYV +D E K +E Sbjct: 100 GEVSLRYSMYNERFPITGGQTTAKAIDEVYALTDIMPGCCIHLSSLSPEEKYRADADRLPVPYMFENPAGHFHGLQADGVYFVYVEEDDAEFLKSQE 196 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1126.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1126.5.1 >prot_C-tenellus_contig1126.5.1 ID=prot_C-tenellus_contig1126.5.1|Name=mRNA_C-tenellus_contig1126.5.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=114bp MEEPRETTSSANGTGEVTLKYEMYDEKFPIEDGSITAAAIDDIYCLSFAMback to top mRNA from alignment at C-tenellus_contig1126:13187..14122+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig1126.5.1 ID=mRNA_C-tenellus_contig1126.5.1|Name=mRNA_C-tenellus_contig1126.5.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=936bp|location=Sequence derived from alignment at C-tenellus_contig1126:13187..14122+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig1126:13187..14122+ >mRNA_C-tenellus_contig1126.5.1 ID=mRNA_C-tenellus_contig1126.5.1|Name=mRNA_C-tenellus_contig1126.5.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=342bp|location=Sequence derived from alignment at C-tenellus_contig1126:13187..14122+ (Choristocarpus tenellus KU2346)back to top |