mRNA_C-tenellus_contig11248.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig11248.1.1 vs. uniprot
Match: A0A448ZNT1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNT1_9STRA) HSP 1 Score: 120 bits (302), Expect = 1.310e-27 Identity = 77/216 (35.65%), Postives = 118/216 (54.63%), Query Frame = 1 Query: 100 KSVLSDQRKVNRVGFVIGHTHRRGRSGVLVDSVYDLVHLGKKWFDILRDG*GVYLHPTEDPPNPPGTQSKLLMTEVIFVAAVCHPRKQSNG-VWFDGKMRICPIMDTKVAKCSSIHRPKGKVLV-PAMMDRERYKKLMIEDVIQAVKAHMPRPEDTPSLC--RGTGQSH--TSRKGSWRKLRRRPWTTLSYKTQPANSADVNVNDLGLFHSIQQLR 729 K +L+ + K+ RV +++ H GR D + +H+ +KWF + R YL P E P ++SK MT+V+F+ A PR +N WFDGK+ I P + + AK SS++RPKG ++ P +D E YK++++E V+ A+ PR TP + + H T R+ + W ++ KTQP NS D+NV DLG F+SIQ L+ Sbjct: 234 KPLLTAKNKLKRVEWILEHIDDNGR----FDDWFKWIHIDEKWFYLKRTKQTTYLLPGEAEPKST-SKSKNHMTKVMFLCATARPRWDTNNCAWFDGKIGIWPFVVKEPAKRSSVNRPKGTLVTKPQNVDGEVYKRMLLEKVLPAIYEKWPRGSSTPEIFIQEDNAKPHKATIREEVKAAAASKGWN-ITVKTQPPNSPDMNVLDLGFFNSIQSLQ 443
BLAST of mRNA_C-tenellus_contig11248.1.1 vs. uniprot
Match: A0A6A4Z848_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z848_9STRA) HSP 1 Score: 105 bits (261), Expect = 2.850e-22 Identity = 70/223 (31.39%), Postives = 115/223 (51.57%), Query Frame = 1 Query: 73 KVKRVK*WIKSVLSDQRKVNRVGFVIGHTHRRGRSGVLVDSVYDLVHLGKKWFDILRDG*GVYLHPTEDPPNPPGTQSKLLMTEVIFVAAVCHP-RKQSNGVWFDGKMRICPIMDTKVAKCSSIHRPKGK-VLVPAMMDRERYKKLMIEDVIQAVKAHMPRPEDTPSLCRGTGQSHTSRKGSWRKLRRRPWTTLSYKTQPANSADVNVNDLGLFHSIQQLRGR 735 K+K + + K +L+D KV R+ + + G + ++ + VH+ +KWF + YL+ E P +SK +T+V+F+AAV P FDGK+ + P + AK +S +RPKG +L P ++ E Y+K+++++V+ A+KA MPR + + + ++L R T + QP NS D NV DLG F+SIQ L+ R Sbjct: 136 KLKAMSSYSKPMLTDDNKVQRMKHALSFIPTLSK-GTIFGNMNNFVHVDEKWFFLTTVKKRYYLYEDEVLPTR-FLKSKRFITKVMFLAAVARPCYDHHKKCHFDGKIGVWPFVKPVEAKRNSKNRPKGTPLLAPESVNAEVYRKMIVDNVVPAIKAKMPRQSQANIIYLQQDNASPHASVTTQRLLERGVTGIGVSNQPPNSPDFNVLDLGYFNSIQSLQSR 356
BLAST of mRNA_C-tenellus_contig11248.1.1 vs. uniprot
Match: A0A6A4Z322_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z322_9STRA) HSP 1 Score: 103 bits (258), Expect = 9.960e-22 Identity = 80/251 (31.87%), Postives = 123/251 (49.00%), Query Frame = 1 Query: 34 VSIASLWDLCKCEKVKRVK*WIKSVLSDQRKVNRVGFVIGHTHRRGRSGVLVDSVYDLVHLGKKWFDILRDG*GVYLHPTEDPPNPPGTQSKLLMTEVIFVAAVCHPR-KQSNGVWFDGKMRICPIMDTKVAKCSSIHRPKGKV-LVPAMMDRERYKKLMIEDVIQAVKAHMPRPEDTPSLC--RGTGQSHTSRKGSWRKLRRRPWT------------TLSYKTQPANSADVNVNDLGLFHSIQQLRGRH 738 + +++L D K + + +K L+D K RV + + H + + +YD VH+ +KWF+ R YL P E PP+ TQSK +T+V+F+ AV PR + +DGK+ +T A SS +RP G + L P + R YKK++I++VI A+KA P E + S+ + + H + PW ++S K QP NS D+NV DLG F +IQ L+ H Sbjct: 128 IPVSTLKDYYKRGTLVKYNSHVKPKLTDVNKTARVKWAMDFVHP---TELRFHDMYDYVHVDEKWFNATRVKSRFYLLPGETPPHRT-TQSKRFITKVMFLTAVARPRWDDAKSECWDGKIGTWHFTETVPAARSSRNRPAGTLELRPINVTRPIYKKMLIDNVIPAIKAKWP-AESSRSVVIQQDNARPHVA-----------PWDAAVVSACTSDGWSMSLKCQPPNSPDLNVLDLGFFRAIQSLQQTH 362
BLAST of mRNA_C-tenellus_contig11248.1.1 vs. uniprot
Match: W4GWE0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GWE0_9STRA) HSP 1 Score: 103 bits (256), Expect = 1.220e-21 Identity = 71/227 (31.28%), Postives = 113/227 (49.78%), Query Frame = 1 Query: 97 IKSVLSDQRKVNRVGFVIGHTHRRGRSGVLVDSVYDLVHLGKKWFDILRDG*GVYLHPTEDPPNPPGTQSKLLMTEVIFVAAVCHPRKQSNGV-WFDGKMRICPIMDTKVAKCSSIHRPKGKVLV-PAMMDRERYKKLMIEDVIQAVKAHMPR--------------PEDTPSLCRGTGQSHTSRKGSWRKLRRRPWTTLSYKTQPANSADVNVNDLGLFHSIQQLR 729 ++ +L+D K RV +V+ H H + D + + VH+ +KWF + +YL P E+PP+ +SK +T+V+F++AV PR + V WFDGK+ + A+ SS +R G ++ P + ++ Y+K++I++VI A+KA PR P P R H+ R W +S QP N D+NV DLG F +IQ L+ Sbjct: 76 VRPLLTDANKAVRVQWVMKHLHALSSAQYAFDDMMNTVHVDEKWFFATKISKKMYLAPGEEPPHRT-CKSKRYITKVMFLSAVARPRWVDDEVGWFDGKIGTWHFTERVPAERSSRNRAAGTLVTKPVSVTQDIYRKMLIDNVIPAIKAKWPRNSSRCITIQQDNARPHVPPLDARIVEACHSDR-----------WD-MSVVYQPPNHPDMNVLDLGFFRAIQSLQ 289
BLAST of mRNA_C-tenellus_contig11248.1.1 vs. uniprot
Match: A0A6A3M484_9STRA (Uncharacterized protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3M484_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 5.840e-20 Identity = 71/232 (30.60%), Postives = 113/232 (48.71%), Query Frame = 1 Query: 76 VKRVK*WIKSVLSDQRKVNRVGFVIGHTHRR-GRSGVLVDSVYDLVHLGKKWFDILRDG*GVYLHPTEDPPNPPGTQSKLLMTEVIFVAAVCHPRKQSNG-VWFDGKMRICPIMDTKVAKCSSIHRPKGKVLVPAM-MDRERYKKLMIEDVIQAVKAHMPR--------PEDTPS---LCRGTGQSHTSRKGSWRKLRRRPWTTLSYKTQPANSADVNVNDLGLFHSIQQLR 729 V+RV +K LS+ K + + + H R G + +YD++H+ +KWF++ + YL E P + +K + +V+F+AAV PR S+ FDGK+ I PI++ A SI+RPKG ++ + M R Y K++ V+ A++ P +D S L + + ++ W + K QPA S D+NV DLG FHSIQ L+ Sbjct: 119 VQRVTVRVKPTLSEDHKRRHLAYALAHVERPIGARLYRLHHMYDMIHIDEKWFNMYKATNTFYLTANETAPYT-SSPNKRYIGKVMFLAAVARPRYDSHRKCQFDGKIGIWPIVEESSALRKSINRPKGAIVTKCVNMTRSVYVKMLKTKVLPAIRTKWPGGKRRVIFIQQDNASPHVLEKDEEIAAAGKEDGW---------DIRMKCQPARSPDMNVLDLGFFHSIQSLQ 340
BLAST of mRNA_C-tenellus_contig11248.1.1 vs. uniprot
Match: A0A6A4Z9D8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z9D8_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 2.550e-19 Identity = 74/232 (31.90%), Postives = 118/232 (50.86%), Query Frame = 1 Query: 76 VKRVK*WIKSVLSDQRKVNRVGFVIGHTHRRGRSGVLV-DSVYDLVHLGKKWFDILRDG*GVYLHPTEDPPNPPGTQSKLLMTEVIFVAAVCHPRKQS-NGVWFDGKMRICPIMDTKVAKCSSIHRPKGK-VLVPAMMDRERYKKLMIEDVIQAVKAHMPRPEDTPS-LCRGTGQSHTS----------RKGSWRKLRRRPWTTLSYKTQPANSADVNVNDLGLFHSIQQLR 729 +KR +K +L+D+ K +R+ FV H R G SG + D VH+ +KWF + + YL E P +SK +T+V+F+ AV PR + N +DG++ + P + T+ A SS +R +G V P + R+ Y+ +I+ VI AV++ P + + + + H S R+G W T+S +QPA S D+NV DLG F++IQ L+ Sbjct: 1 MKRCTSRLKPMLTDKHKSDRMAFVQRHL-RTGASGKRYWHDMLDTVHIDEKWFYVTKQNRRYYLWSDEAVPTRK-CRSKKHITKVMFLTAVARPRYDARNKRMWDGRIGMWPFVKTRPALRSSKNRKRGDDVTEPFTVTRDVYRSFLIDKVIPAVRSKWPSSKKNQIWIQQDNAKPHVSVNDPAVVAAGRQGGW---------TISLCSQPAQSPDLNVLDLGYFNAIQSLQ 221
BLAST of mRNA_C-tenellus_contig11248.1.1 vs. uniprot
Match: UPI002008F387 (uncharacterized protein LOC125210222 n=2 Tax=Salvia hispanica TaxID=49212 RepID=UPI002008F387) HSP 1 Score: 97.1 bits (240), Expect = 2.840e-19 Identity = 73/245 (29.80%), Postives = 121/245 (49.39%), Query Frame = 1 Query: 13 KWAAKARVSIASLWDLCKCEKVKRVK*WIKSVLSDQRKVNRVGFVIGHTHRRGRSG-VLVDSVYDLVHLGKKWFDILRDG*GVYLHPTEDPPNPPGTQSKLLMTEVIFVAAVCHPRKQSNG-VWFDGKMRICPIMDTKVAKCSSIHRPKGKVLVPAM--MDRERYKKLMIEDVIQAVKAHMPRPEDTPS-LCRGTGQSH-TSRKGSWRKLRRRPWTTLSYKTQPANSADVNVNDLGLFHSIQQLR 729 K A K +VS + K K++ IK L+D K++R+ + + H G +L +++++VH+ +KWF + + YL P ED P +SK +T+V+F+ AV P S+G FDGK+ I P + AK S +RP+G + + +++E ++ ++ +I A+KA P + + + H TS + +QPANS D NV DLG F +IQ L+ Sbjct: 142 KLAIKMQVSKTTAGRWSKANKIRPHTNAIKPALTDANKISRMRWCLTHIQPTIAEGKLLYHAMHNIVHIDEKWFYMTKTSDRYYLLPDEDEPYR-SCKSKRFITKVMFMCAVSRPMFGSDGQTIFDGKIGIFPFTEQVPAKRKSKNRPRGTLETKPIPSVNKEAMRECLLNQIIPAIKAKWPANASKEIYIQQDNAKPHLTSSDFQFEAAASTDGFKFHLISQPANSPDTNVLDLGFFRAIQSLQ 385
BLAST of mRNA_C-tenellus_contig11248.1.1 vs. uniprot
Match: W4GF08_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GF08_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 6.310e-19 Identity = 71/250 (28.40%), Postives = 122/250 (48.80%), Query Frame = 1 Query: 19 AAKARVSIASLWDLCKCEKVKRVK*WIKSVLSDQRKVNRVGFVIGHTHRRGRSGVLVDSVYDLVHLGKKWFDILRDG*GVYLHPTEDPPNPPGTQSKLLMTEVIFVAAVCHPRKQS-NGVWFDGKMRICPIMDTKVAKCSSIHRPKGK-VLVPAMMDRERYKKLMIEDVIQAVKAHMPRP-EDTPSLCRGTGQSHTS----------RKGSWRKLRRRPWTTLSYKTQPANSADVNVNDLGLFHSIQQLR 729 A ++ +LW L + + +KR +K + +D+ K +R+ FV H + D VH+ +KWF + + YL + P +SK+ + +V+F+ AV PR + N +DG++ + P + T+ A SS +R +G V P + R+ Y +I+ VI AV++ P ++ + + + H S R+G W T+S +QPA S D+NV DLG F++IQ L+ Sbjct: 107 AESTGIARTTLWRLLQSKVMKRCTSRLKPMQTDKHKSDRMAFVQRHLRTEASGKRYWHDMLDTVHIDEKWFYVTKQNRRYYLWSDKAVPTRK-CRSKMDIMKVMFLTAVARPRYDARNKRMWDGRIGMRPFVKTRPALRSSKNRKRGDDVTEPFTVTRDVYPSFLIDKVIPAVRSKWPSSMKNQIWIQQDNAKPHVSVNDPAVIAAGRQGGW---------TISLCSQPAQSPDLNVLDLGYFNAIQSLQ 346
BLAST of mRNA_C-tenellus_contig11248.1.1 vs. uniprot
Match: W4FWJ6_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FWJ6_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 6.800e-19 Identity = 67/186 (36.02%), Postives = 95/186 (51.08%), Query Frame = 1 Query: 196 VYDLVHLGKKWFDILRDG*GVYLHPTEDPPNPPGTQSKLLMTEVIFVAAVCHPR-KQSNGVWFDGKMRICPIMDTKVAKCSSIHRPKGKV-LVPAMMDRERYKKLMIEDVIQAVKAHMPRP-EDTPSLCRGTGQSHT--SRKGSWRKLRRRPWTTLSYKTQPANSADVNVNDLGLFHSIQQLRGRH 738 +YD VH+ +KWF YL P E+PP+ TQSK +T+V+F++AV P + WFDGK+ A SS +RP G + L P + R YKK++I++VI A+KA P T + + + H S + W + K QP NS D+NV DLG F +IQ L+ H Sbjct: 1 MYDYVHVDEKWFHATPIRSRFYLLPGEEPPHR-STQSKRFITKVMFLSAVARPLWDNAKSEWFDGKIGTWHFTQHVRAARSSRNRPAGTMELRPVNVTRPVYKKMLIDNVIPAIKALWPADCSKTVFIQQDNARLHVPPSDADIIKACTSDGWA-MKLKYQPPNSPDMNVLDLGFFRAIQALQQTH 184
BLAST of mRNA_C-tenellus_contig11248.1.1 vs. uniprot
Match: I6THG9_PSEMU (Tranposase n=1 Tax=Pseudo-nitzschia multiseries TaxID=37319 RepID=I6THG9_PSEMU) HSP 1 Score: 94.7 bits (234), Expect = 1.890e-18 Identity = 74/251 (29.48%), Postives = 126/251 (50.20%), Query Frame = 1 Query: 19 AAKARVSIASLWDLCKCEKVKRVK*WIKSVLSDQRKVNRVGFVIGHTHRRGRSGVLVDSVYDLVHLGKKWFDILRDG*GVYLHPTEDPPNPPGT-QSKLLMTEVIFVAAVCHPRKQSN-GVWFDGKMRICPIMDTKVAKCSSIHRPKGKVL---VPAMMDRERYKKLMIEDVIQAVKAHMP-----RP----EDTPSLCRGTGQSHTSRKGSWRKLRRRPWTTLSYKTQPANSADVNVNDLGLFHSIQQLR 729 +A + ++ +L + K ++ R +K L+++ K RV F + G+ + +YD +H+ +KWF + YL E P P T +SK + +V+F+ AV PR ++ FDGK+ I P + + A+ +S++RP+G ++ +P++ E Y+K+M+E V+ A++ P RP ED H + + R+ R ++ TQP NS D NV DLG F SIQ L+ Sbjct: 174 SAASGIARTTLGNYVKKGQILRHSGAVKPFLTEKNKKARVEFALSLIKPDGK----FEDMYDTIHIDEKWFYLKTTNQKTYLCSGE--PEPHSTCKSKRFIEKVMFLCAVARPRHDADRNAGFDGKIGIWPFVVKEPAQRNSVNRPRGTMVTKNIPSVNAAE-YQKMMLEKVLPAIQEKFPVCWKSRPIFIQEDNAK------PHHLRSRAAVREAAREAGWNITVTTQPPNSPDFNVLDLGFFASIQALQ 411 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11248.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig11248.1.1 >prot_C-tenellus_contig11248.1.1 ID=prot_C-tenellus_contig11248.1.1|Name=mRNA_C-tenellus_contig11248.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=160bp MTEVIFVAAVCHPRKQSNGVWFDGKMRICPIMDTKVAKCSSIHRPKGKVLback to top mRNA from alignment at C-tenellus_contig11248:3..797- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig11248.1.1 ID=mRNA_C-tenellus_contig11248.1.1|Name=mRNA_C-tenellus_contig11248.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=795bp|location=Sequence derived from alignment at C-tenellus_contig11248:3..797- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig11248:3..797- >mRNA_C-tenellus_contig11248.1.1 ID=mRNA_C-tenellus_contig11248.1.1|Name=mRNA_C-tenellus_contig11248.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=480bp|location=Sequence derived from alignment at C-tenellus_contig11248:3..797- (Choristocarpus tenellus KU2346)back to top |