mRNA_C-tenellus_contig1119.2.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig1119.2.2 vs. uniprot
Match: D8LF00_ECTSI (Isochorismatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF00_ECTSI) HSP 1 Score: 158 bits (399), Expect = 9.740e-45 Identity = 80/165 (48.48%), Postives = 98/165 (59.39%), Query Frame = 1 Query: 13 GTALLIVDPQNDFHPGGSLAIPGADTDAERIASLITQHGGNIDEIFVTLDSHHKMDIAHPKFWKNSEGFA--PSPFTLITTEDIIAGRWVPVQDQYLVQYIHLQLTFGHLFIYRSTTINTKCNVSLFLYASHVENPFEEYCKTYTQQLEEGGHFTLCIWPEHCLV 501 GTALLIVDPQ DFH GG+LAI GA DAERIA L+T +IDEI VTLDSHH+MDIAHP FW + G P+PFTLI +EDI G W+PV++++ +E+C YT++LEEGG FTLC+WPEHCL+ Sbjct: 24 GTALLIVDPQADFHEGGALAIQGASDDAERIAQLVTDQSEHIDEIVVTLDSHHRMDIAHPMFWTDGRGGGSYPAPFTLIKSEDIQNGTWLPVEEEH-----------------------------------------KEHCIEYTRKLEEGGKFTLCVWPEHCLI 147
BLAST of mRNA_C-tenellus_contig1119.2.2 vs. uniprot
Match: K0S5P6_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S5P6_THAOC) HSP 1 Score: 151 bits (381), Expect = 6.580e-43 Identity = 76/162 (46.91%), Postives = 98/162 (60.49%), Query Frame = 1 Query: 16 TALLIVDPQNDFHPGGSLAIPGADTDAERIASLITQHGGNIDEIFVTLDSHHKMDIAHPKFWKNSEGFAPSPFTLITTEDIIAGRWVPVQDQYLVQYIHLQLTFGHLFIYRSTTINTKCNVSLFLYASHVENPFEEYCKTYTQQLEEGGHFTLCIWPEHCLV 501 T LL++D Q DFHPGGSLAIP A DAER A+ I +HG +I I +T+DSHHK+ IAHP FW ++EG P+PFTLIT +D+ G+W+P D L + L + + LY S E +YC YT++LE G F LCIWPEHCL+ Sbjct: 15 TTLLLIDIQKDFHPGGSLAIPTALDDAERTAAFIKKHGSSIRRIVMTMDSHHKLHIAHPCFWTDTEGNHPNPFTLITMDDVQTGKWIPRSD--LKHPVQKPLVDDEVLAQGG-------KLPANLYKSDGELDIVQYCIEYTRRLEARGRFQLCIWPEHCLI 167
BLAST of mRNA_C-tenellus_contig1119.2.2 vs. uniprot
Match: A0A7S2UAS2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UAS2_9STRA) HSP 1 Score: 147 bits (372), Expect = 7.030e-41 Identity = 81/169 (47.93%), Postives = 99/169 (58.58%), Query Frame = 1 Query: 4 STSGTALLIVDPQNDFHPGGSLAIPGADTDAERIASLITQHGGNIDEIFVTLDSHHKMDIAHPKFWKNSE--GFAPSPFTLITTEDIIAGRWVPVQDQYL-VQYIHLQLTFGHLFIYRSTTINTKCNVSLFLYASHVENPFEEYCKTYTQQLEEGGHFTLCIWPEHCLV 501 S T LL+VD QN FHPGGSLAIP AD DA RIA+LI +ID I T+DSHHK+ IAHP FW + + G P PF+LI+T DII+G+W P D L V H+ H Y +T + N L +YC YT++LE G F LCIWPEHCL+ Sbjct: 10 SNKTTTLLLVDVQNSFHPGGSLAIPTADEDAVRIATLIRSSSSSIDRIVATMDSHHKLHIAHPSFWVSGDDMGKHPDPFSLISTVDIISGKWKPRPDLVLPVGDPHVDPCIFHG--YEATVTSDGSNFDL-----------TKYCIEYTRRLEAKGRFQLCIWPEHCLI 165
BLAST of mRNA_C-tenellus_contig1119.2.2 vs. uniprot
Match: B8CG08_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CG08_THAPS) HSP 1 Score: 145 bits (367), Expect = 1.090e-40 Identity = 72/165 (43.64%), Postives = 97/165 (58.79%), Query Frame = 1 Query: 16 TALLIVDPQNDFHPGGSLAIPGADTDAERIASLITQHGGNIDEIFVTLDSHHKMDIAHPKFWKNSEGFAPSPFTLITTEDIIAGRWVPVQDQYLVQYIHLQLTFG---HLFIYRSTTINTKCNVSLFLYASHVENPFEEYCKTYTQQLEEGGHFTLCIWPEHCLV 501 T LL++D Q DFHPGGSLAIP A +DA+R A I Q+ +I I T+DSH K+ IAHP FWKN +G P+PFT+I+ ED++ G+W+P D L F H + + T +V L+ ++C YT++LE G F LCIWPEHCL+ Sbjct: 2 TTLLLIDVQKDFHPGGSLAIPTASSDAQRTAQFIRQNASSIHRIVATMDSHQKLHIAHPCFWKNDKGEHPNPFTVISNEDVVTGKWIPRSD----------LKFPVVPHGVMMDDAVLATGGDVPEKLHGEAGSLDILQWCIEYTKRLESKGRFQLCIWPEHCLI 156
BLAST of mRNA_C-tenellus_contig1119.2.2 vs. uniprot
Match: A0A7S4S579_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S579_9STRA) HSP 1 Score: 147 bits (370), Expect = 2.130e-40 Identity = 75/166 (45.18%), Postives = 100/166 (60.24%), Query Frame = 1 Query: 4 STSGTALLIVDPQNDFHPGGSLAIPGADTDAERIASLITQHGGNIDEIFVTLDSHHKMDIAHPKFWKNSEGFAPSPFTLITTEDIIAGRWVPVQDQYLVQYIHLQLTFGHLFIYRSTTINTKCNVSLFLYASHVENPFEEYCKTYTQQLEEGGHFTLCIWPEHCLV 501 ++ GT LL++D QNDFHPGGSLAIP A+ DA+RIASLI + +ID I TLDSH K+ IAHP FW +G PSPFT+I ++++ +G+W P +D V L +F I ++ L +YC YT+ LE+ G F LCIWPEHC+V Sbjct: 12 NSGGTTLLLIDVQNDFHPGGSLAIPTANEDADRIASLIRNNMSSIDRIIATLDSHRKLHIAHPAFWVGEDGKNPSPFTIIASDEVESGKWKPREDL-KVPSTELDTV---IFEKAEDVIREDGSIDLL-----------KYCIEYTRALEKKGRFQLCIWPEHCIV 162
BLAST of mRNA_C-tenellus_contig1119.2.2 vs. uniprot
Match: A0A7S0GAH6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GAH6_9STRA) HSP 1 Score: 142 bits (357), Expect = 1.900e-39 Identity = 74/173 (42.77%), Postives = 101/173 (58.38%), Query Frame = 1 Query: 7 TSGTALLIVDPQNDFHPGGSLAIPGADTDAERIASLITQ------HGGNIDEIFVTLDSHHKMDIAHPKFWKNSEGFAPSPFTLITTEDIIAGRWVPVQDQYLVQYIHLQLTFGHLFIYRSTTINTKCNVSLFLYASHVENPFE--EYCKTYTQQLEEGGHFTLCIWPEHCLV 501 T + LLI+DPQ DFHPGGSLAI AD D+ERIASLI G I+ IFVTLD+HHK+ I HP FW N +G P PFTLI++ D+ +G W+P + L + G + + +F +++ F+ ++C YT+ +E+ GHF CIWPEHCL+ Sbjct: 18 TMASTLLIIDPQKDFHPGGSLAIDKADEDSERIASLIRNSTEKDGRGSTIERIFVTLDTHHKLHIGHPCFWVNVDGNHPEPFTLISSADVESGLWIPRGN--------LHIPDGMV------------DKDIFDGGFNIDGSFDLKKHCVQYTKSVEKSGHFKHCIWPEHCLL 170
BLAST of mRNA_C-tenellus_contig1119.2.2 vs. uniprot
Match: A0A7S0TDT2_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S0TDT2_9STRA) HSP 1 Score: 142 bits (359), Expect = 3.040e-39 Identity = 68/166 (40.96%), Postives = 101/166 (60.84%), Query Frame = 1 Query: 16 TALLIVDPQNDFHPGGSLAIPGADTDAERIASLITQHGGNIDEIFVTLDSHHKMDIAHPKFWKNSEGFAPSPFTLITTEDIIAGRWVPVQDQYLVQYIHLQLTFGHLFIYRSTTINTKCNVSLFLYAS----HVENPFEEYCKTYTQQLEEGGHFTLCIWPEHCLV 501 T LL++D Q DFHPGGSLA+P AD+DAERI I Q+ +I I T+DSHH + IAHP FW + +G P+PFT+I+ ED++ GRW+P +D ++ + + + + LY++ + + +++C YT++LE G F+L IWPEHCLV Sbjct: 2 TTLLLIDCQKDFHPGGSLAVPNADSDAERITQFIHQNATSIHRIVATMDSHHPLHIAHPSFWSDGQGNLPAPFTVISMEDVVEGRWIPRED--------VKPSARESLLIEDDILLAGDGIPSELYSTDETGNRQLNMKQWCIEYTRRLEAKGKFSLMIWPEHCLV 159
BLAST of mRNA_C-tenellus_contig1119.2.2 vs. uniprot
Match: A0A7S0TFS9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S0TFS9_9STRA) HSP 1 Score: 142 bits (359), Expect = 8.320e-39 Identity = 68/166 (40.96%), Postives = 101/166 (60.84%), Query Frame = 1 Query: 16 TALLIVDPQNDFHPGGSLAIPGADTDAERIASLITQHGGNIDEIFVTLDSHHKMDIAHPKFWKNSEGFAPSPFTLITTEDIIAGRWVPVQDQYLVQYIHLQLTFGHLFIYRSTTINTKCNVSLFLYAS----HVENPFEEYCKTYTQQLEEGGHFTLCIWPEHCLV 501 T LL++D Q DFHPGGSLA+P AD+DAERI I Q+ +I I T+DSHH + IAHP FW + +G P+PFT+I+ ED++ GRW+P +D ++ + + + + LY++ + + +++C YT++LE G F+L IWPEHCLV Sbjct: 2 TTLLLIDCQKDFHPGGSLAVPNADSDAERITQFIHQNATSIHRIVATMDSHHPLHIAHPSFWSDGQGNLPAPFTVISMEDVVEGRWIPRED--------VKPSARESLLIEDDILLAGDGIPSELYSTDETGNRQLNMKQWCIEYTRRLEAKGKFSLMIWPEHCLV 159
BLAST of mRNA_C-tenellus_contig1119.2.2 vs. uniprot
Match: A0A6G0XHW0_9STRA (Isochorismatase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHW0_9STRA) HSP 1 Score: 141 bits (356), Expect = 1.500e-38 Identity = 70/166 (42.17%), Postives = 91/166 (54.82%), Query Frame = 1 Query: 4 STSGTALLIVDPQNDFHPGGSLAIPGADTDAERIASLITQHGGNIDEIFVTLDSHHKMDIAHPKFWKNSEGFAPSPFTLITTEDIIAGRWVPVQDQYLVQYIHLQLTFGHLFIYRSTTINTKCNVSLFLYASHVENPFEEYCKTYTQQLEEGGHFTLCIWPEHCLV 501 S G LLI+DPQ DFHPGGSLAIP AD DA R A+ I H +ID++ +TLDSH ++ IAH FW N +G +P PFTLIT+ED+ G+W + V +++Y YT+ LE+GG FTLCIWPEHC++ Sbjct: 16 SQGGVTLLIIDPQRDFHPGGSLAIPSADEDAGRTAAFIRNHLNDIDQLIITLDSHQRLHIAHSVFWTNEKGESPPPFTLITSEDVANGKWKARSPE----------------------------VQVYVYE-------------YTKALEQGGRFTLCIWPEHCII 140
BLAST of mRNA_C-tenellus_contig1119.2.2 vs. uniprot
Match: A0A067BU91_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BU91_SAPPC) HSP 1 Score: 139 bits (351), Expect = 1.150e-37 Identity = 69/163 (42.33%), Postives = 89/163 (54.60%), Query Frame = 1 Query: 13 GTALLIVDPQNDFHPGGSLAIPGADTDAERIASLITQHGGNIDEIFVTLDSHHKMDIAHPKFWKNSEGFAPSPFTLITTEDIIAGRWVPVQDQYLVQYIHLQLTFGHLFIYRSTTINTKCNVSLFLYASHVENPFEEYCKTYTQQLEEGGHFTLCIWPEHCLV 501 G AL I+DPQ DFHPGGSLAIP A+ DAER A+ I +H I ++ +TLDSH ++ IAH FWKN +G +P+PFTLIT+ED+ G+W P + + Y YT+ LE GG FTLCIWPEHC++ Sbjct: 21 GLALFIIDPQVDFHPGGSLAIPTANDDAERTAAFIRKHMTAITQLVITLDSHQRLHIAHGVFWKNVDGASPAPFTLITSEDVANGKWSPRAPE-----------------------------------------LQAYAYEYTKALEAGGRFTLCIWPEHCII 142 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1119.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1119.2.2 >prot_C-tenellus_contig1119.2.2 ID=prot_C-tenellus_contig1119.2.2|Name=mRNA_C-tenellus_contig1119.2.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=167bp MSTSGTALLIVDPQNDFHPGGSLAIPGADTDAERIASLITQHGGNIDEIFback to top mRNA from alignment at C-tenellus_contig1119:1062..1934+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig1119.2.2 ID=mRNA_C-tenellus_contig1119.2.2|Name=mRNA_C-tenellus_contig1119.2.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=873bp|location=Sequence derived from alignment at C-tenellus_contig1119:1062..1934+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig1119:1062..1934+ >mRNA_C-tenellus_contig1119.2.2 ID=mRNA_C-tenellus_contig1119.2.2|Name=mRNA_C-tenellus_contig1119.2.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=501bp|location=Sequence derived from alignment at C-tenellus_contig1119:1062..1934+ (Choristocarpus tenellus KU2346)back to top |