mRNA_C-tenellus_contig11158.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig11158.1.1 vs. uniprot
Match: D8LG44_ECTSI (PAP2_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG44_ECTSI) HSP 1 Score: 257 bits (656), Expect = 4.840e-79 Identity = 115/185 (62.16%), Postives = 147/185 (79.46%), Query Frame = 2 Query: 614 HLLELPLP--LSSKARDSVWRPVSDVLTVMLPFIAFVRSLFLGRNSRCKLVSDWFRLMAVTYLFRCLCVTLTSLPGPAPHCESYELYHPPANWHDVAIRLGPLVGDFRTCGDLIFSGHTAWTTITMLLIAKSFNQMPHVLYFTIRVLGVMYLLIMCACTIAGRKHYTVDIALGIMIASLTFFRFQ 1162 H++++P+ + + DS WRP+SD+LT+ LP +AF R+LF R +RC+ ++DWFRLM+VTYL RCLCVTLTSLPGPAPHCE+ Y P WHDVA RLGPL+GDFRTCGDL+FSGHTAWTT++MLL+ KSF + P ++Y ++ G +YLL M CTIAGRKHYTVD+AL ++IA LTFFRFQ Sbjct: 17 HMVQVPMLWFVFWQGVDSPWRPLSDILTLALPGLAFFRTLFFDRRTRCRFIADWFRLMSVTYLMRCLCVTLTSLPGPAPHCEALSGYDRPRGWHDVATRLGPLMGDFRTCGDLLFSGHTAWTTVSMLLLTKSFRRAPRLVYALVKSTGFLYLLTMATCTIAGRKHYTVDVALAVVIAGLTFFRFQ 201
BLAST of mRNA_C-tenellus_contig11158.1.1 vs. uniprot
Match: A0A6H5J947_9PHAE (PAP2_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J947_9PHAE) HSP 1 Score: 266 bits (679), Expect = 4.700e-75 Identity = 116/171 (67.84%), Postives = 142/171 (83.04%), Query Frame = 2 Query: 656 DSVWRPVSDVLTVMLPFIAFVRSLFLGRNSRCKLVSDWFRLMAVTYLFRCLCVTLTSLPGPAPHCESYELYHPPANWHDVAIRLGPLVGDFRTCGDLIFSGHTAWTTITMLLIAKSFNQMPHVLYFTIRVLGVMYLLIMCACTIAGRKHYTVDIALGIMIASLTFFRFQDG 1168 DS WRP+SD+LT+ LP +AF+R+LF R +RC+ ++DWFRLM+VTYL RCLCVTLTSLPGPAPHCE+ Y PP WHDVA RLGPL+GDFRTCGDL+FSGHTAWTT++MLL+ KSF + P ++Y ++ G +YLL M CTIAGRKHYTVD+AL ++IA LTFFRFQDG Sbjct: 365 DSPWRPLSDILTLALPGLAFLRTLFFDRRTRCRFIADWFRLMSVTYLMRCLCVTLTSLPGPAPHCEALSEYDPPRGWHDVATRLGPLMGDFRTCGDLLFSGHTAWTTVSMLLLTKSFRRAPRLVYAFVKAAGFLYLLTMATCTIAGRKHYTVDVALAVVIAGLTFFRFQDG 535
BLAST of mRNA_C-tenellus_contig11158.1.1 vs. uniprot
Match: D7FRP1_ECTSI (PAP2_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRP1_ECTSI) HSP 1 Score: 230 bits (587), Expect = 3.370e-66 Identity = 105/180 (58.33%), Postives = 134/180 (74.44%), Query Frame = 2 Query: 632 LPLSSKARDSVWRPVSDVLTVMLPFIAFVRSLFLGRNSRCKLVSDWFRLMAVTYLFRCLCVTLTSLPGPAPHCESYELYHPPANWHDVAIRLGPLVGDFRTCGDLIFSGHTAWTTITMLLIAKSFNQMPHVLYFTIRVLGVMYLLIMCACTIAGRKHYTVDIALGIMIASLTFFRFQDGW 1171 L + + DS WRPVSD LT +LP IA +RSLF+ R R LV+ WFRL+++ Y+ RCL + LTSLPGPAPHC LY+PP +WH++A R+G +VGDF +CGDL+FSGH A+TT+TML+ KS+ H Y + LGV+YLL MC IAGRKHYTVDI LGI++ASLTFFRF++GW Sbjct: 188 LVIPEQTLDSPWRPVSDTLTALLPGIALLRSLFMDRKQRVTLVTSWFRLVSIVYMLRCLTIGLTSLPGPAPHCRDKALYNPPVSWHEIATRMGVMVGDFSSCGDLLFSGHAAFTTLTMLIFVKSWRG--HATYRVWKALGVVYLLTMCTLAIAGRKHYTVDITLGILVASLTFFRFENGW 365
BLAST of mRNA_C-tenellus_contig11158.1.1 vs. uniprot
Match: K3X811_GLOUD (PAP2_C domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X811_GLOUD) HSP 1 Score: 183 bits (465), Expect = 4.670e-48 Identity = 88/179 (49.16%), Postives = 127/179 (70.95%), Query Frame = 2 Query: 644 SKARDSVWRPVSDVLTVMLPFIAFVRSLFLGRNSRCKLVSDWFRLMAVTYLFRCLCVTLTSLPGPAPHCESYE-LYHPPANWHDVAIRLGPLVGDFRTCGDLIFSGHTAWTTITMLLIAKSFNQMPHVLYFT-IR-VLGVMYLLIMCACTIAGRKHYTVDIALGIMIASLTFFRFQDGW 1171 ++A DS WRPVSDVLT ++P +A V++ F+ R +RC+++S +FR+ V+Y R L V+LTSLPGPAPHC LY PP W D+ R+GP+ G+F +CGDLIFSGH A+T +LL ++ +Q H + F+ +R LG ++LL + ++GRKHY+VD+ LGIMI++L FF F+ GW Sbjct: 203 AQAVDSPWRPVSDVLTAVMPVVAMVQTYFMTRANRCRVISTFFRVATVSYALRMLTVSLTSLPGPAPHCRPGSGLYFPPQTWIDIVTRVGPMYGNFNSCGDLIFSGHMAYTNSALLLYLRTMDQ--HFVRFSKLRWTLGAVFLLTLATLCVSGRKHYSVDVMLGIMISTLVFFHFEHGW 379
BLAST of mRNA_C-tenellus_contig11158.1.1 vs. uniprot
Match: A0A662Y930_9STRA (PAP2_C domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y930_9STRA) HSP 1 Score: 178 bits (451), Expect = 2.600e-46 Identity = 86/182 (47.25%), Postives = 123/182 (67.58%), Query Frame = 2 Query: 638 LSSKARDSVWRPVSDVLTVMLPFIAFVRSLFLGRNSRCKLVSDWFRLMAVTYLFRCLCVTLTSLPGPAPHCESYEL-YHPPANWHDVAIRLGPLVGDFRTCGDLIFSGHTAWTTITMLLIAKSFNQ-MPHVLYFTIR-VLGVMYLLIMCACTIAGRKHYTVDIALGIMIASLTFFRFQDGWT 1174 + +A DS WRPVSD+LT +P I +++LF+ R +RC+++S +FRL V Y R L V++TSLPGPAPHC + Y+PP W D+ R+GP+ G++ +CGDLIFSGH A+T +LL ++ ++ P IR G+ YL+++ IAGRKHYTVD+ LG+MIA+L FF F+ WT Sbjct: 175 IPEQAIDSKWRPVSDLLTAGVPVIFMLQTLFMTRANRCRIISSFFRLATVCYFLRMLTVSVTSLPGPAPHCRAGSPDYYPPTTWIDIVTRVGPIYGNYNSCGDLIFSGHMAYTNSAVLLYLRTLDRNFPGHTASKIRWACGMSYLVVLSVLCIAGRKHYTVDVVLGLMIATLVFFHFEHSWT 356
BLAST of mRNA_C-tenellus_contig11158.1.1 vs. uniprot
Match: A0A2D4CGJ0_PYTIN (Transmembrane protein, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CGJ0_PYTIN) HSP 1 Score: 177 bits (448), Expect = 7.080e-46 Identity = 84/182 (46.15%), Postives = 123/182 (67.58%), Query Frame = 2 Query: 638 LSSKARDSVWRPVSDVLTVMLPFIAFVRSLFLGRNSRCKLVSDWFRLMAVTYLFRCLCVTLTSLPGPAPHCESYE-LYHPPANWHDVAIRLGPLVGDFRTCGDLIFSGHTAWTTITMLLIAKSFNQMPHVLYFTIR--VLGVMYLLIMCACTIAGRKHYTVDIALGIMIASLTFFRFQDGWT 1174 + +A DS WRP+SD+LT +P + V++ + R +RC++++ +FR+ ++Y R V+LTSLPGPAPHC Y PP NW DV R+GP+ G++ +CGDLIFSGH A+TT +LL + ++ H F+ LGV YL+++ A ++GRKHYTVD+ LG+MIA+L FF F+ GWT Sbjct: 175 IPEQAVDSKWRPLSDILTAAVPVLFLVQAHLMTRENRCRVMNTFFRVATISYALRMCTVSLTSLPGPAPHCRPGSGNYFPPQNWIDVVTRIGPMYGNYNSCGDLIFSGHMAYTTSAVLLYLRVLDR--HFPRFSRARWALGVSYLVVLAALCVSGRKHYTVDVVLGVMIATLVFFHFEHGWT 354
BLAST of mRNA_C-tenellus_contig11158.1.1 vs. uniprot
Match: A0A835YJN4_9STRA (PAP2 superfamily C-terminal-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJN4_9STRA) HSP 1 Score: 178 bits (451), Expect = 2.380e-45 Identity = 82/156 (52.56%), Postives = 105/156 (67.31%), Query Frame = 2 Query: 746 RCKLVSDWFRLMAVTYLFRCLCVTLTSLPGPAPHCESYELYHPPANWHDVAIRLGPLVGDFRTCGDLIFSGHTAWTTITMLLIAKSFNQMPHVLYFTIRVLGVMYLLIMCACTIAGRKHYTVDIALGIMIASLTFFRFQDGWTSDDADWSLTSHML 1213 RC+++ W R +A+ Y R + LTSLPGPAPHC E YHPP WHD+AIR+GP+VGD+ TCGDLIFSGHT++TT+TML + K+F Y VLG MY+ MC +AGRKHYT+DIA+ I++ LTF RFQDGW + L+ L Sbjct: 351 RCQVLVSWLRCVALVYFLRGSTIPLTSLPGPAPHCMRAEGYHPPQGWHDIAIRMGPMVGDYTTCGDLIFSGHTSFTTMTMLCLVKTFQGRRG--YAVASVLGFMYVASMCLLALAGRKHYTIDIAIAILVTWLTFHRFQDGWAARAKGGGLSDEQL 504
BLAST of mRNA_C-tenellus_contig11158.1.1 vs. uniprot
Match: A0A024GAV1_9STRA (PAP2_C domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GAV1_9STRA) HSP 1 Score: 175 bits (444), Expect = 2.780e-45 Identity = 79/173 (45.66%), Postives = 120/173 (69.36%), Query Frame = 2 Query: 659 SVWRPVSDVLTVMLPFIAFVRSLFLGRNSRCKLVSDWFRLMAVTYLFRCLCVTLTSLPGPAPHCE-SYELYHPPANWHDVAIRLGPLVGDFRTCGDLIFSGHTAWTTITMLLIAKSFNQMPHVLYFTIR-VLGVMYLLIMCACTIAGRKHYTVDIALGIMIASLTFFRFQDGW 1171 S WRP+SD+LT ++P + FV+S +L R +RC++++ +FR+ V Y R ++LTSLPGPAPHC Y Y PP W D+ +GP+ G++++CGDLIFSGH A++T +LL + ++ H+ Y +R + V+YL + +AGRKHYTVD+ LG+MIA+L++F F+ GW Sbjct: 206 SPWRPISDILTTLVPVVFFVQSCWLSRENRCRILTSFFRIATVAYFLRMCTISLTSLPGPAPHCRPGYVEYRPPETWIDIVTSVGPIYGNYKSCGDLIFSGHMAFSTTAILLYLRVLDRY-HIGYSRLRWFIAVIYLFGLSGLLLAGRKHYTVDVILGVMIAALSYFHFEHGW 377
BLAST of mRNA_C-tenellus_contig11158.1.1 vs. uniprot
Match: F0WUI2_9STRA (Transmembrane protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WUI2_9STRA) HSP 1 Score: 175 bits (443), Expect = 3.850e-45 Identity = 80/177 (45.20%), Postives = 123/177 (69.49%), Query Frame = 2 Query: 647 KARDSVWRPVSDVLTVMLPFIAFVRSLFLGRNSRCKLVSDWFRLMAVTYLFRCLCVTLTSLPGPAPHCE-SYELYHPPANWHDVAIRLGPLVGDFRTCGDLIFSGHTAWTTITMLLIAKSFNQMPHVLYFTIR-VLGVMYLLIMCACTIAGRKHYTVDIALGIMIASLTFFRFQDGW 1171 +A S WRP+SDVLT ++P F++S +L R +RC++++ +FR+ +Y FR ++LTSLPGPAPHC Y Y PP W D+ +GP+ G++++CGDLIFSGH A++T +LL + ++ H + R ++G +YL+ + A +AGRKHYTVD+ LG++IASL++F F+ GW Sbjct: 202 QALHSPWRPISDVLTSLVPVFFFIQSFWLPRENRCRILTSFFRIGTASYFFRMCTISLTSLPGPAPHCRPGYVEYRPPETWIDIVTLVGPIYGNYKSCGDLIFSGHMAFSTTAVLLYLRVLDRY-HTGFSRARWIVGAIYLIGLSALLLAGRKHYTVDVVLGVLIASLSYFHFEHGW 377
BLAST of mRNA_C-tenellus_contig11158.1.1 vs. uniprot
Match: A0A484EEP4_BRELC (PAP2_C domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EEP4_BRELC) HSP 1 Score: 172 bits (435), Expect = 4.080e-44 Identity = 82/174 (47.13%), Postives = 118/174 (67.82%), Query Frame = 2 Query: 659 SVWRPVSDVLTVMLPFIAFVRSLFLGRNSRCKLVSDWFRLMAVTYLFRCLCVTLTSLPGPAPHCESYEL-YHPPANWHDVAIRLGPLVGDFRTCGDLIFSGHTAWTTITMLLIAKSFNQ-MPHVLYFTIR-VLGVMYLLIMCACTIAGRKHYTVDIALGIMIASLTFFRFQDGW 1171 S WRPVSD+LT LP I ++++ + R SRC++VS +FR+ + Y R L V++TSLPGPAPHC + L Y PPA W D+ R+GP+ G++ +CGDLIFSGH A+T +LL ++ ++ + IR GV YL+I+ IAGRKHYTVD+ LG++I+++ FF F+ W Sbjct: 176 SKWRPVSDILTAGLPVIFLLQTIVMSRPSRCRIVSSFFRIATICYFLRMLTVSVTSLPGPAPHCRAGNLDYFPPATWIDIVTRVGPIYGNYNSCGDLIFSGHMAYTNSAVLLYLRTLDRNFSGSMSSKIRWACGVAYLIILAVLCIAGRKHYTVDVVLGVIISTMVFFLFEHSW 349 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11158.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig11158.1.1 >prot_C-tenellus_contig11158.1.1 ID=prot_C-tenellus_contig11158.1.1|Name=mRNA_C-tenellus_contig11158.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=292bp MSRHLLELPLPLSSKARDSVWRPVSDVLTVMLPFIAFVRSLFLGRNSRCKback to top mRNA from alignment at C-tenellus_contig11158:10..2813+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig11158.1.1 ID=mRNA_C-tenellus_contig11158.1.1|Name=mRNA_C-tenellus_contig11158.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2804bp|location=Sequence derived from alignment at C-tenellus_contig11158:10..2813+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig11158:10..2813+ >mRNA_C-tenellus_contig11158.1.1 ID=mRNA_C-tenellus_contig11158.1.1|Name=mRNA_C-tenellus_contig11158.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=876bp|location=Sequence derived from alignment at C-tenellus_contig11158:10..2813+ (Choristocarpus tenellus KU2346)back to top |