mRNA_C-tenellus_contig11123.1.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig11123.1.2 vs. uniprot
Match: A0A6H5L982_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L982_9PHAE) HSP 1 Score: 249 bits (637), Expect = 7.730e-74 Identity = 160/451 (35.48%), Postives = 236/451 (52.33%), Query Frame = 1 Query: 1 GLIEASDVRALKPICLAFKDLYDVVKSGLEVRDHSIVLLRSCLLAVNLVLDFPKTRRLPENVTEAMRKLTMEMNDMMEIISRLSGVKRKPTRNSRKLIYPSRDRNIVTDHEKSL-------QQILAVLVEASSQTDFFPSTSVVKEMASVPVGTPKLPLAFVRRESLEEGVVNNITRSNKS----HVLVGMGGWGKTVLASCLVRNEVIRSAFRDGTFWLGVGKGGKEQVSVLLQRLEKMMGLAPA-KTHEVLHQFDDVEQRVRHMSTFISKGNLKCLVVLDDVWEREVLEPFLSAGFQLLVTTRDESLILATNRRVCSQVGGMLEDEAVELLRRTCGAVGEVPKPDMQQASLIYDYLYVASDCDYSPLALSIIGSMDSLRADPLQPESWRSVHRSLADLLRVKKDSLTGALSLCFDKLGTRMHQRLCKLAVLASGVLVPADMIAHLWEQV 1317 GL+ + V L PIC AFK L + E ++ L+ C +++L K V + +R N + + RL+ R L+ +RD + D + L Q + + V A + P T EMA +P P LP AFV R L E V ++ + ++ VL G+ G GKTV AS +VR E +R +F+DG FW+ VG+ G + LL+ L + + AP+ + V H+F DVE V H+ + +GNL+CLVVLD+VW+RE++ FL GF+ LVTTRD +++ C+ V + E EA+ELL++ A +P+ + L VA DC + PLA++IIG+M S R +P PE+WR VH L + + +D + GAL++ F +L + R KL VLA GV P DM+AHLWEQV Sbjct: 51 GLLNVASVGPLMPICEAFKGLIQAAEGAAEADENLRELIAWCAFLTDVLLQHGKEVDALAPVMKPLRDFVSTTNQLAKRAKRLA-----TRRKCAALLCFARDGKQIQDFDAKLRSIWNDIQGVTILWVSAEFRAARPPKTG---EMAKIPHNAPALPPAFVERSGLVEAVAQDLAAAERATDTADVLRGIPGGGKTVAASSVVRCENVRRSFKDGIFWVQVGQVGTGNPTALLKGLAEDLAHAPSNRPRTVPHEFRDVEHVVSHLVGVLEQGNLRCLVVLDNVWDREMVPLFLRTGFRCLVTTRDVAMVPRHLWGTCTPVDMLTEAEALELLKKASRATSSIPRDEG---------LEVADDCGFLPLAIAIIGAMGSSRVNPHSPETWRGVHARLVEEPSLVQDHVGGALAVSFRELSEKARARFRKLGVLARGVRAPVDMVAHLWEQV 484
BLAST of mRNA_C-tenellus_contig11123.1.2 vs. uniprot
Match: D8LL58_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL58_ECTSI) HSP 1 Score: 228 bits (580), Expect = 4.880e-62 Identity = 155/452 (34.29%), Postives = 226/452 (50.00%), Query Frame = 1 Query: 1 GLIEASDVRALKPICLAFKDLYDVVKSGLEVRDHSIVLLRSCLLAVNLVLDFPKTRRLPENVTEAMRKLTMEMNDMMEIISRLSGVKRKPTRNSR----KLIYPSRDRNIVTDHEKSLQQI------LAVLVEASSQTDFFPSTSVVKEMASVPVGTPKLPLAFVRRESLEEGVVNNITRS----NKSHVLVGMGGWGKTVLASCLVRNEVIRSAFRDGTFWLGVGKGGKEQVSVLLQRLEKMMGLAPA-KTHEVLHQFDDVEQRVRHMSTFISKGNLKCLVVLDDVWEREVLEPFLSAGFQLLVTTRDESLILATNRRVCSQVGGMLEDEAVELLRRTCGAVGEVPKPDMQQASLIYDYLYVASDCDYSPLALSIIGSMDSLRADPLQPESWRSVHRSLADLLRVKKDSLTGALSLCFDKLGTRMHQRLCKLAVLASGVLVPADMIAHLWE 1311 GL++ + V L P+C AF L + + +EV + L+ C V + ++ K + +R + M D + L+ KR +R L+ RD V D + L+ I + +L S P + MA VP +LP AFV R L + VV ++ + N +HVL GM G GKT+ A +VR E +R +F+DG FW+ VG+ G LLQ L + + AP+ + H V H+F DVE V H+ + NL+CLVVLDDVW+ +++ FL GF LVTTRD ++I + VC++V + EA+ELL+ A +P + L VA DC + PL L+I+G+M S RADP E+WR +H L + +D + L++ F L R KL VLA G P DM+AHLWE Sbjct: 92 GLLDMASVGPLTPVCKAFTSLIEAAEGAIEVAKNLEELVSWCSFLVGVFIEHGKQE-------DNLRPIAKPMKDFVATTIELA--KRAKAMGARGKCTALLCHRRDGKQVQDFDVKLRHIWDDIQGVTLLAFYSDFRATLPPKTAY--MARVPKNAKQLPPAFVERRDLFKAVVKDLVATDRATNAAHVLRGMPGGGKTIAAKAVVRCEDVRRSFKDGIFWVQVGQVGTGNPMALLQGLARDLAHAPSHQPHTVPHEFVDVEHAVSHLEGVRKERNLRCLVVLDDVWDAQIVPLFLCGGFHSLVTTRDLAVIPRDLQGVCTEVEMLTNAEALELLKNASRATAAIPTNEG---------LKVAKDCGFLPLPLAIVGAMGSSRADPDSAETWRGIHALLQQEPELVQDPVGSVLAVSFCGLKGAARTRFRKLGVLAKGARAPVDMVAHLWE 523
BLAST of mRNA_C-tenellus_contig11123.1.2 vs. uniprot
Match: D7FH19_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH19_ECTSI) HSP 1 Score: 214 bits (546), Expect = 1.970e-57 Identity = 146/448 (32.59%), Postives = 241/448 (53.79%), Query Frame = 1 Query: 1 GLIEASDVRALKPICLAFKDLYDVVKSGLEVRDHSIVLLRSCLLAVNLVLDFPKTRRLPENVTEAMRKLTMEMNDMMEIISRLSGVKRKPTRNS----RKLIYPSRDRNIVTDHEKSLQQIL-AVLVEASSQTDFFPSTSVVKEM------------ASVPVGTPKLPLAFVRRESLEEGVVNNITRSNKS----HVLVGMGGWGKTVLASCLVRNEVIRSAFRDGTFWLGVGKGGKEQVSVLLQRLEKMMGLAPAKT-HEVLHQFDDVEQRVRHMSTFISKGNLKCLVVLDDVWEREVLEPFLSAGFQLLVTTRDESLILATNRRVCSQVGGMLEDEAVELLRRTCGAVGEVPKPDMQQASLIYDYLYVASDCDYSPLALSIIGSMDSLRADPLQPESWRSVHRSLADLLRVKKDSLTGALSLCFD----KLGTRMHQRLCKLAVLA 1266 GLI A++ L P+ + K L V+ R+ + L R C+ +LD K +PE + + + EM E + R V+ TR+S R+++ + DR+ H++ L+ +L AVL ++QT+ + +K M A +P P LP +V+R ++ E VV+++T ++S H L+GMGG GKT++AS +VR++ +R+ F+ G FW+ VG+ GK+ V++LL+ L + P T ++F E+ +RH+S+ ++ L+CLVVLD+VW EV+ F S GF +LVTTR ++I A + V ++VG M E++A+E+L + A G +P + +Q VA DC PLAL +IG++ + PL P SWR+VH+ L + + +D G L D L + ++L +AV+A Sbjct: 84 GLINAANETVLAPVFVVLKGLLGAVQGAAAAREEIVELARYCVAMSRCLLDAAKADVMPETIKSTLEEFKGEM----EAVGRF--VQTYGTRSSGCCWRRMVLNAHDRDTAAGHKRKLKDLLDAVLAGLAAQTN--QGLNQIKGMILARDPPSLGALAEIPREAPVLPTTYVQRTAMLEEVVDDLTHPHRSASATHCLLGMGGGGKTLIASSVVRDDRVRARFKRGIFWVPVGREGKD-VALLLEHLAVELSRVPTDTPRSCPNRFSGAEEALRHLSSVCAEDGLRCLVVLDNVWNVEVVNAFASTGFHVLVTTRQRAVISAVHAGVWTEVGDMSEEDALEVLSKASQADGPLPAEEARQ---------VALDCGMLPLALGMIGAL--AKDQPLDPLSWRAVHKKLQEKRAMFRDVENGKLFSTMDTSVCNLPSNQREQLQLMAVMA 511
BLAST of mRNA_C-tenellus_contig11123.1.2 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI) HSP 1 Score: 204 bits (518), Expect = 1.080e-53 Identity = 148/457 (32.39%), Postives = 234/457 (51.20%), Query Frame = 1 Query: 1 GLIEASDVRALKPICLAFKDLYDVVKSGLEVRDHSIVLLRSCLLAVNLVLDFPKTRRLPENVTEAMRKLTMEMNDMMEIISRLS-GVKRKPTRNSRKLIYPSRDRNIVTDHEKSLQQILA--VLVEASSQTDFF----PST--SVVKEMASVPVGTPKLPLA-FVRRESLEEGVVNNITRSNKS---HVLVGMGGWGKTVLASCLVRNEVIRSAFRDGTFWLGVGKGGKEQVSVLLQRLEKMMGLAPAKT-HEVLHQFDDVEQRVRHMSTFISKGNLKCLVVLDDVWEREVLEPFLSAGFQLLVTTRDESLILATNRRVCSQVGGMLEDEAVELLRRTCGAVGEVPKPDMQQASLIYDYLYVASDCDYSPLALSIIGSMDSLRADPLQPESWRSVHRSLADLLRVKK------DSLTGALSLCFDKLGTRMHQRLCKLAVLASGVLVPADMIAHLWE 1311 G++ + V L P+C AFK L + + E +D L+ C +++ + V + ++ + N++ +R + G K R D + + E+ L++I + LV+ F PS + +MA+VP G +LP + +V R +++E V + +T +S + +VGMGG GK+VLAS VR +R FR G FW+ VG+G K + LLQ L +G AP H V H D +EQ +H++ S G LVVLDDVWEREV++ F+ GF++L+TTRD S++ R+ ++G M E+EA+ELLR+T G VG+ P D++ V + C + PL L+I GSM +R L +W + + L ++ + + S+ L FD L R + K+AVLA+G L P +M+ +LWE Sbjct: 117 GVLGVASVGPLVPVCEAFKALIEAAEGAAECQDKLQSLVSQCAFLATVLIQHGRAVGPLAQVQKPIQDFVVTTNELAGFAARWAKGGK------CRAFCCHRPDLSALAGFEECLRRIGSDIALVDGLEHHQSFLAALPSLLPPSLPDMAAVPTGALELPSSSYVERAAVQE-VADGLTTPEESRAPYTVVGMGGGGKSVLASAAVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAWDVGAAPTDAPHGVPHVLDRLEQVQQHLAAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGLPAGRL--ELGDMTEEEALELLRKTSGTVGQ-PGDDVRTKMT-----KVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKVVLETSFDSLAVRKQEEFLKMAVLAAGALAPIEMLRNLWE 558
BLAST of mRNA_C-tenellus_contig11123.1.2 vs. uniprot
Match: D7G720_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI) HSP 1 Score: 201 bits (512), Expect = 7.140e-53 Identity = 144/458 (31.44%), Postives = 235/458 (51.31%), Query Frame = 1 Query: 1 GLIEASDVRALKPICLAFKDLYDVVKSGLEVRDHSIVLLRSCLLAVNLVLDFPKTRRLPENVTEAMRKLTMEMNDMMEIISRLSGVKRKPTRNS--RKLIYPSRDRNIVTDHEKSLQQILA--VLVEASSQTDFF----PST--SVVKEMASVPVGTPKLPLA-FVRRESLEEGVVNNITRSNKS---HVLVGMGGWGKTVLASCLVRNEVIRSAFRDGTFWLGVGKGGKEQVSVLLQRLEKMMGLAPAKTH-EVLHQFDDVEQRVRHMSTFISKGNLKCLVVLDDVWEREVLEPFLSAGFQLLVTTRDESLILATNRRVCSQVGGMLEDEAVELLRRTCGAVGEVPKPDMQQASLIYDYLYVASDCDYSPLALSIIGSMDSLRADPLQPESWRSVHRSLADLLRVKK------DSLTGALSLCFDKLGTRMHQRLCKLAVLASGVLVPADMIAHLWE 1311 G++ + V L P+C AFK L + + E +D L+ C +++ + + ++ + D + + L+G + + R D + + E+ L++I + LV+ F PS + +MA+VP G +LP + +V R +++E V + +T +S + +VGMGG GK+VLAS +VR +R FR G FW+ VG+G K + LLQ L + +G AP V D +EQ +H++ S G + LVVLDDVWEREV++ F+ GF++L+TTRD S++ R+ ++G + E+EA+ELLR+T GAVG+ P D++ V + C + PL L+I GSM +R L +W + + L ++ + + S+ L FD L R + K+AVLA+G L P +M+ +LWE Sbjct: 100 GVLGVASVGPLVPVCEAFKALIEAAEGAAECQDKLQSLVSQCAFLATVLIQHGRA-------VGPLAQVQKPIQDFVATTNELAGFAARWAKGGKCRAFFCHRPDLSALAGFEECLRRIRSDIALVDGLEHHQSFLAALPSLLPPSLPDMAAVPAGALELPSSSYVERAAVQE-VADGLTAPEESRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLARDVGAAPTDAPCGVPRVLDSLEQVRQHLAAVTSTGTSQRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRL--ELGDVTEEEALELLRKTSGAVGQ-PGDDVRTKMT-----KVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKVVLETSFDSLAVRKQEEFLKMAVLAAGALAPIEMLRNLWE 541
BLAST of mRNA_C-tenellus_contig11123.1.2 vs. uniprot
Match: A0A6H5KXS7_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE) HSP 1 Score: 194 bits (494), Expect = 1.460e-51 Identity = 140/442 (31.67%), Postives = 225/442 (50.90%), Query Frame = 1 Query: 1 GLIEASDVRALKPICLAFKDLYDVVKSGLEVRDHSIVLLRSCLLAVNLVLDFPKTRRLPENVTEAMRKLTMEMNDMMEIISRLSGVKRKPTRNSRKLIYPSRDRNIVTDHEKSLQQILA--VLVEASSQTDFF----PST--SVVKEMASVPVGTPKLPLA-FVRRESLEEGVVNNITRSNKS---HVLVGMGGWGKTVLASCLVRNEVIRSAFRDGTFWLGVGKGGKEQVSVLLQRLEKMMGLAPAKT-HEVLHQFDDVEQRVRHMSTFISKGNLKCLVVLDDVWEREVLEPFLSAGFQLLVTTRDESLILATNRRVCSQVGGMLEDEAVELLRRTCGAVGEVPKPDMQQASLIYDYLYVASDCDYSPLALSIIGSMDSLRADPLQPESWRSVHRSLADLLRVKK------DSLTGALSLCFDKLGTRMHQRLCKLAVLAS 1269 G+++ + V L P+C AFK L + + E + L+ C +++ + V + + + ND+ +R + + R D + + D E+ L++I + LV+ F PS + +MA+VP G +LP + +V R +++E V + +T + +VGMGG GK+VLAS +VR +R FR G FW+ VG+G K + LLQ L + MG A H V H D +EQ +H++ S G LVVLDDVWEREV++ F+ GF++L+TTRD S+++ R+ +VG M E+EA+ELLR++ GAVG+ P D++ V + C + PL L+I GSM ++ L +W+ + +L ++ + + S+ L FD L R + KLAVLA+ Sbjct: 63 GVLDVASVGPLVPVCEAFKALIEAAEGAAESQHKLQSLVSQCAFLATVLIQHGRAVGPLAQVHKPIEDFVVTTNDLAGFAARWANGGK-----CRAFFCHRPDLSALADFEECLRRIRSDIALVDGLEHHQSFLAALPSLLPPSLPDMAAVPAGALELPCSSYVERAAVQE-VADGLTSPEDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAREMGAARTDAPHTVPHVLDGLEQVKQHLAAVASTGTFPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVVVPAGRL--EVGDMTEEEALELLRKSSGAVGQ-PGDDVRTKMT-----KVVALCGHLPLVLAIAGSMSVVKGKGLTAVAWKELAENLENVAKKMRARGEQSSSINAVLETSFDSLAVRKQEEFLKLAVLAA 490
BLAST of mRNA_C-tenellus_contig11123.1.2 vs. uniprot
Match: D8LGG5_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG5_ECTSI) HSP 1 Score: 196 bits (499), Expect = 4.020e-51 Identity = 138/458 (30.13%), Postives = 233/458 (50.87%), Query Frame = 1 Query: 1 GLIEASDVRALKPICLAFKDLYDVVKSGLEVRDHSIVLLRSCLLAVNLVLDFPKTRRLPENVTEAMRKLTMEMNDMMEIISRLSGVKRKPTRNS--RKLIYPSRDRNIVTDHEKSLQQILA--VLVEASSQTDFF----PSTSVVK--EMASVPVGTPKLPLAFVRRESLEEGVVNNITRSNKS---HVLVGMGGWGKTVLASCLVRNEVIRSAFRDGTFWLGVGKGGKEQVSVLLQRLEKMMGLAPAKT-HEVLHQFDDVEQRVRHMSTFI-SKGNLKCLVVLDDVWEREVLEPFLSAGFQLLVTTRDESLILATNRRVCSQVGGMLEDEAVELLRRTCGAVGEVPKPDMQQASLIYDYLYVASDCDYSPLALSIIGSMDSLRADPLQPESWRSVHRSLADLLRVKK------DSLTGALSLCFDKLGTRMHQRLCKLAVLASGVLVPADMIAHLWE 1311 G+++ + V L P+C A K L + + E D L+ C +++ + A+ ++ + D + + L+G + ++ R D + + E+ L+ I + LV+ Q F PS + +MA+VP G LP +V R +++E V + +T + + +VG+GG GK+VLAS +VR +R FR G W+ VG+G K + LLQ L + MG+AP H V D +EQ +H++ + S G LVVLDDVWEREV++ + GF++L+TTRD S+++ RR+ +G M E+EA+ELLR+T G VG+ D + + V + C + PL L+I GSM +++ L +W + +S ++ + + ++ L FD L + + +++VLA+G L P +M+ +LWE Sbjct: 75 GVLDVASVGPLVPVCQALKALIEAAEGAAECEDKVQSLVSQCAFLATVLIQHGRA-------VGALAQVHKPIQDFVVTTNELAGFAARWAKDGKCRAFFCHRPDLSALAGFEECLRGIRSDIALVDGLEQHQLFLAALPSLRPPRLLDMAAVPAGALDLPRGYVERAAVQE-VADGLTAPEEPRAPYTVVGLGGGGKSVLASAVVRKPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREMGVAPTDAPHAVPQVLDSLEQVQQHLAAVVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDWSVVVVPARRL--DLGDMTEEEALELLRKTSGTVGQ--PGDYVRMKMTK----VVALCGHLPLVLAIAGSMSAVKGKGLTAVAWEELAKSFENVAKKMRARGQQSSAIKVVLETSFDSLAVQKQEEFLRMSVLAAGALAPIEMLRNLWE 516
BLAST of mRNA_C-tenellus_contig11123.1.2 vs. uniprot
Match: D7FUD7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD7_ECTSI) HSP 1 Score: 192 bits (487), Expect = 1.370e-49 Identity = 124/345 (35.94%), Postives = 193/345 (55.94%), Query Frame = 1 Query: 331 EKSLQQI---LAVLVEASSQ----TDFFPSTSVVKEMASVPVGTPKLP-LAFVRRESLEEGVVNNITRSNKS---HVLVGMGGWGKTVLASCLVRNEVIRSAFRDGTFWLGVGKGGKEQVSVLLQRLEKMMGLAPAKT-HEVLHQFDDVEQRVRHMSTFISKGNLKCLVVLDDVWEREVLEPFLSAGFQLLVTTRDESLILATNRRVCSQVGGMLEDEAVELLRRTCGAVGEVPKPDMQQASLIYDYLYVASDCDYSPLALSIIGSMDSLRADPLQPESWRSVHRSLADLLRVKK------DSLTGALSLCFDKLGTRMHQRLCKLAVLASGVLVPADMIAHLWE 1311 EK LQ+I + +V+A + TD P + + +MA VPVG +LP ++V R +++E V + +T + + +VG+GG GK+VLAS +VR +R FR G W+ VG+G K + LLQ L + +G AP H V H D +EQ +H++ S N LVVLDDVWEREV++ F+ GF+LL+TTRD S++ R+ ++G M E+EA+ELLR+T G V M+ ++ + C + PL L+I GSM +++ L +W + + ++ + + S+ L FD L TR + +AVLA+G L P +M+++LWE Sbjct: 10 EKKLQEIGGDVCRVVDAIAAKRIFTDILPPS--LPDMAEVPVGALELPHSSYVERAAVQE-VADGLTNPEEPRTPYTVVGIGGGGKSVLASAVVRMPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREVGAAPTDAPHGVPHALDSLEQVQQHLAAVASTRNSPRLVVLDDVWEREVVDAFVPLGFKLLLTTRDRSIVCDPAGRL--ELGDMTEEEALELLRKTSGTVDPGDDVRMKMTKVV-------ALCGHLPLVLAIAGSMSAVKGKGLTAVAWEELAKEFENVAKKMRARGQQSSSIKVVLETTFDSLATRKQKEFLMMAVLAAGALAPIEMLSNLWE 342
BLAST of mRNA_C-tenellus_contig11123.1.2 vs. uniprot
Match: D8LPV9_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPV9_ECTSI) HSP 1 Score: 188 bits (478), Expect = 1.900e-48 Identity = 114/318 (35.85%), Postives = 175/318 (55.03%), Query Frame = 1 Query: 385 DFFPSTSVVKEMASVPVGTPKLPLAFVRRESLEE--GVVNNITRSNKSHVLVGMGGWGKTVLASCLVRNEVIRSAFRDGTFWLGVGKGGKEQVSVLLQRLEKMMGLAPAKT-HEVLHQFDDVEQRVRHMSTFISKGNLKCLVVLDDVWEREVLEPFLSAGFQLLVTTRDESLILATNRRVCSQVGGMLEDEAVELLRRTCGAVGEVPKPDMQQASLIYDYLYVASDCDYSPLALSIIGSMDSLRADPLQPESWRSVHRSLADLLRV------KKDSLTGALSLCFDKLGTRMHQRLCKLAVLASGVLVPADMIAHLWE 1311 D P T + + A+VP G LP ++V R ++E G + + ++ +++VGMGG GKTVLAS LVR + FR G FW+ +G+G + + LQ L + MG AP H V H FD +EQ ++H++ +S+G+ LVVLDDVWEREV+ FL G ++LVTTRD S++ + ++G M EDEA+ELL +T G VG+ Q + + D C PL L+I GSM ++ L+ +W + ++ + + +L L F+ L R + ++AVLA G + P +M+ +LWE Sbjct: 228 DVLPPT--LPQRAAVPTGALALPRSYVERPGVQEAMGDLMDPEKALAPYMIVGMGGGGKTVLASALVRKSSVLEHFRGGIFWMEMGRGANKSLLHRLQGLAREMGAAPTDAPHGVPHVFDSLEQVMQHLAAVVSRGSSPRLVVLDDVWEREVVAAFLGVGLKVLVTTRDRSIVGVPGGLL--ELGDMAEDEALELLWKTSGTVGQPGDGVRTQMTKVVDR------CGRLPLVLAIAGSMPVVKGKGLKDGAWEELIEEFENVTTIMWEPGEESRNLDMVLGASFNALAARKREEFLRMAVLAPGAVAPFEMLRNLWE 535
BLAST of mRNA_C-tenellus_contig11123.1.2 vs. uniprot
Match: A0A6H5LJA6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJA6_9PHAE) HSP 1 Score: 182 bits (463), Expect = 4.100e-48 Identity = 113/308 (36.69%), Postives = 172/308 (55.84%), Query Frame = 1 Query: 418 MASVPVGTPKLPLAFVRRESLEEGVVNNITRSNKS---HVLVGMGGWGKTVLASCLVRNEVIRSAFRDGTFWLGVGKGGKEQVSVLLQRLEKMMGLAPAKT-HEVLHQFDDVEQRVRHMSTFISKGNLKCLVVLDDVWEREVLEPFLSAGFQLLVTTRDESLILATNRRVCSQVGGMLEDEAVELLRRTCGAVGEVPKPDMQQASLIYDYLYVASDCDYSPLALSIIGSMDSLRADPLQPESWRSVHR---SLADLLRVKKD---SLTGALSLCFDKLGTRMHQRLCKLAVLASGVLVPADMIAHLWE 1311 MA+VP G LP ++V R +++E V + + + + + +VGMGG GKT+L S +VR +R FR G FW+ VG+ K + LLQ L + M AP T H V H + +EQ +H++T S G LVVLDDVWEREV++ LS G ++LVTTRD S++ + + ++G M E+EA+ELL +T VG+ Q + + C + PL L+I GSM ++ L +W + + ++A +RV+ + S+ L FD L R + K+ VLA+G L P +M+ +LWE Sbjct: 1 MAAVPAGALTLPQSYVERAAVQE-VADGLIKPEEPRAPYAVVGMGGGGKTMLVSAVVRKSNVREHFRGGVFWMRVGRHAKNSLLSLLQGLAREMSAAPTDTPHGVPHVLESLEQVKQHLATVASAGTSPRLVVLDDVWEREVVDALLSLGLKVLVTTRDRSVVGVSGGLL--ELGDMTEEEALELLLKTSRTVGQPGHEVRTQMTKVVVL------CGHLPLVLAIAGSMSVVKGKGLTAVAWEELIKEFENVAKKMRVRGEQSSSIKVVLGTSFDALAARKQEESLKMTVLAAGALAPIEMLRNLWE 299 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11123.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig11123.1.2 >prot_C-tenellus_contig11123.1.2 ID=prot_C-tenellus_contig11123.1.2|Name=mRNA_C-tenellus_contig11123.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=447bp GLIEASDVRALKPICLAFKDLYDVVKSGLEVRDHSIVLLRSCLLAVNLVLback to top mRNA from alignment at C-tenellus_contig11123:885..2611+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig11123.1.2 ID=mRNA_C-tenellus_contig11123.1.2|Name=mRNA_C-tenellus_contig11123.1.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1727bp|location=Sequence derived from alignment at C-tenellus_contig11123:885..2611+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig11123:885..2611+ >mRNA_C-tenellus_contig11123.1.2 ID=mRNA_C-tenellus_contig11123.1.2|Name=mRNA_C-tenellus_contig11123.1.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=1341bp|location=Sequence derived from alignment at C-tenellus_contig11123:885..2611+ (Choristocarpus tenellus KU2346)back to top |