mRNA_C-tenellus_contig11123.1.2 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig11123.1.2
Unique NamemRNA_C-tenellus_contig11123.1.2
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig11123.1.2 vs. uniprot
Match: A0A6H5L982_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L982_9PHAE)

HSP 1 Score: 249 bits (637), Expect = 7.730e-74
Identity = 160/451 (35.48%), Postives = 236/451 (52.33%), Query Frame = 1
Query:    1 GLIEASDVRALKPICLAFKDLYDVVKSGLEVRDHSIVLLRSCLLAVNLVLDFPKTRRLPENVTEAMRKLTMEMNDMMEIISRLSGVKRKPTRNSRKLIYPSRDRNIVTDHEKSL-------QQILAVLVEASSQTDFFPSTSVVKEMASVPVGTPKLPLAFVRRESLEEGVVNNITRSNKS----HVLVGMGGWGKTVLASCLVRNEVIRSAFRDGTFWLGVGKGGKEQVSVLLQRLEKMMGLAPA-KTHEVLHQFDDVEQRVRHMSTFISKGNLKCLVVLDDVWEREVLEPFLSAGFQLLVTTRDESLILATNRRVCSQVGGMLEDEAVELLRRTCGAVGEVPKPDMQQASLIYDYLYVASDCDYSPLALSIIGSMDSLRADPLQPESWRSVHRSLADLLRVKKDSLTGALSLCFDKLGTRMHQRLCKLAVLASGVLVPADMIAHLWEQV 1317
            GL+  + V  L PIC AFK L    +   E  ++   L+  C    +++L   K       V + +R      N + +   RL+       R    L+  +RD   + D +  L       Q +  + V A  +    P T    EMA +P   P LP AFV R  L E V  ++  + ++     VL G+ G GKTV AS +VR E +R +F+DG FW+ VG+ G    + LL+ L + +  AP+ +   V H+F DVE  V H+   + +GNL+CLVVLD+VW+RE++  FL  GF+ LVTTRD +++       C+ V  + E EA+ELL++   A   +P+ +          L VA DC + PLA++IIG+M S R +P  PE+WR VH  L +   + +D + GAL++ F +L  +   R  KL VLA GV  P DM+AHLWEQV
Sbjct:   51 GLLNVASVGPLMPICEAFKGLIQAAEGAAEADENLRELIAWCAFLTDVLLQHGKEVDALAPVMKPLRDFVSTTNQLAKRAKRLA-----TRRKCAALLCFARDGKQIQDFDAKLRSIWNDIQGVTILWVSAEFRAARPPKTG---EMAKIPHNAPALPPAFVERSGLVEAVAQDLAAAERATDTADVLRGIPGGGKTVAASSVVRCENVRRSFKDGIFWVQVGQVGTGNPTALLKGLAEDLAHAPSNRPRTVPHEFRDVEHVVSHLVGVLEQGNLRCLVVLDNVWDREMVPLFLRTGFRCLVTTRDVAMVPRHLWGTCTPVDMLTEAEALELLKKASRATSSIPRDEG---------LEVADDCGFLPLAIAIIGAMGSSRVNPHSPETWRGVHARLVEEPSLVQDHVGGALAVSFRELSEKARARFRKLGVLARGVRAPVDMVAHLWEQV 484          
BLAST of mRNA_C-tenellus_contig11123.1.2 vs. uniprot
Match: D8LL58_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL58_ECTSI)

HSP 1 Score: 228 bits (580), Expect = 4.880e-62
Identity = 155/452 (34.29%), Postives = 226/452 (50.00%), Query Frame = 1
Query:    1 GLIEASDVRALKPICLAFKDLYDVVKSGLEVRDHSIVLLRSCLLAVNLVLDFPKTRRLPENVTEAMRKLTMEMNDMMEIISRLSGVKRKPTRNSR----KLIYPSRDRNIVTDHEKSLQQI------LAVLVEASSQTDFFPSTSVVKEMASVPVGTPKLPLAFVRRESLEEGVVNNITRS----NKSHVLVGMGGWGKTVLASCLVRNEVIRSAFRDGTFWLGVGKGGKEQVSVLLQRLEKMMGLAPA-KTHEVLHQFDDVEQRVRHMSTFISKGNLKCLVVLDDVWEREVLEPFLSAGFQLLVTTRDESLILATNRRVCSQVGGMLEDEAVELLRRTCGAVGEVPKPDMQQASLIYDYLYVASDCDYSPLALSIIGSMDSLRADPLQPESWRSVHRSLADLLRVKKDSLTGALSLCFDKLGTRMHQRLCKLAVLASGVLVPADMIAHLWE 1311
            GL++ + V  L P+C AF  L +  +  +EV  +   L+  C   V + ++  K         + +R +   M D +     L+  KR     +R     L+   RD   V D +  L+ I      + +L   S      P  +    MA VP    +LP AFV R  L + VV ++  +    N +HVL GM G GKT+ A  +VR E +R +F+DG FW+ VG+ G      LLQ L + +  AP+ + H V H+F DVE  V H+     + NL+CLVVLDDVW+ +++  FL  GF  LVTTRD ++I    + VC++V  +   EA+ELL+    A   +P  +          L VA DC + PL L+I+G+M S RADP   E+WR +H  L     + +D +   L++ F  L      R  KL VLA G   P DM+AHLWE
Sbjct:   92 GLLDMASVGPLTPVCKAFTSLIEAAEGAIEVAKNLEELVSWCSFLVGVFIEHGKQE-------DNLRPIAKPMKDFVATTIELA--KRAKAMGARGKCTALLCHRRDGKQVQDFDVKLRHIWDDIQGVTLLAFYSDFRATLPPKTAY--MARVPKNAKQLPPAFVERRDLFKAVVKDLVATDRATNAAHVLRGMPGGGKTIAAKAVVRCEDVRRSFKDGIFWVQVGQVGTGNPMALLQGLARDLAHAPSHQPHTVPHEFVDVEHAVSHLEGVRKERNLRCLVVLDDVWDAQIVPLFLCGGFHSLVTTRDLAVIPRDLQGVCTEVEMLTNAEALELLKNASRATAAIPTNEG---------LKVAKDCGFLPLPLAIVGAMGSSRADPDSAETWRGIHALLQQEPELVQDPVGSVLAVSFCGLKGAARTRFRKLGVLAKGARAPVDMVAHLWE 523          
BLAST of mRNA_C-tenellus_contig11123.1.2 vs. uniprot
Match: D7FH19_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH19_ECTSI)

HSP 1 Score: 214 bits (546), Expect = 1.970e-57
Identity = 146/448 (32.59%), Postives = 241/448 (53.79%), Query Frame = 1
Query:    1 GLIEASDVRALKPICLAFKDLYDVVKSGLEVRDHSIVLLRSCLLAVNLVLDFPKTRRLPENVTEAMRKLTMEMNDMMEIISRLSGVKRKPTRNS----RKLIYPSRDRNIVTDHEKSLQQIL-AVLVEASSQTDFFPSTSVVKEM------------ASVPVGTPKLPLAFVRRESLEEGVVNNITRSNKS----HVLVGMGGWGKTVLASCLVRNEVIRSAFRDGTFWLGVGKGGKEQVSVLLQRLEKMMGLAPAKT-HEVLHQFDDVEQRVRHMSTFISKGNLKCLVVLDDVWEREVLEPFLSAGFQLLVTTRDESLILATNRRVCSQVGGMLEDEAVELLRRTCGAVGEVPKPDMQQASLIYDYLYVASDCDYSPLALSIIGSMDSLRADPLQPESWRSVHRSLADLLRVKKDSLTGALSLCFD----KLGTRMHQRLCKLAVLA 1266
            GLI A++   L P+ +  K L   V+     R+  + L R C+     +LD  K   +PE +   + +   EM    E + R   V+   TR+S    R+++  + DR+    H++ L+ +L AVL   ++QT+     + +K M            A +P   P LP  +V+R ++ E VV+++T  ++S    H L+GMGG GKT++AS +VR++ +R+ F+ G FW+ VG+ GK+ V++LL+ L   +   P  T     ++F   E+ +RH+S+  ++  L+CLVVLD+VW  EV+  F S GF +LVTTR  ++I A +  V ++VG M E++A+E+L +   A G +P  + +Q         VA DC   PLAL +IG++   +  PL P SWR+VH+ L +   + +D   G L    D     L +   ++L  +AV+A
Sbjct:   84 GLINAANETVLAPVFVVLKGLLGAVQGAAAAREEIVELARYCVAMSRCLLDAAKADVMPETIKSTLEEFKGEM----EAVGRF--VQTYGTRSSGCCWRRMVLNAHDRDTAAGHKRKLKDLLDAVLAGLAAQTN--QGLNQIKGMILARDPPSLGALAEIPREAPVLPTTYVQRTAMLEEVVDDLTHPHRSASATHCLLGMGGGGKTLIASSVVRDDRVRARFKRGIFWVPVGREGKD-VALLLEHLAVELSRVPTDTPRSCPNRFSGAEEALRHLSSVCAEDGLRCLVVLDNVWNVEVVNAFASTGFHVLVTTRQRAVISAVHAGVWTEVGDMSEEDALEVLSKASQADGPLPAEEARQ---------VALDCGMLPLALGMIGAL--AKDQPLDPLSWRAVHKKLQEKRAMFRDVENGKLFSTMDTSVCNLPSNQREQLQLMAVMA 511          
BLAST of mRNA_C-tenellus_contig11123.1.2 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI)

HSP 1 Score: 204 bits (518), Expect = 1.080e-53
Identity = 148/457 (32.39%), Postives = 234/457 (51.20%), Query Frame = 1
Query:    1 GLIEASDVRALKPICLAFKDLYDVVKSGLEVRDHSIVLLRSCLLAVNLVLDFPKTRRLPENVTEAMRKLTMEMNDMMEIISRLS-GVKRKPTRNSRKLIYPSRDRNIVTDHEKSLQQILA--VLVEASSQTDFF----PST--SVVKEMASVPVGTPKLPLA-FVRRESLEEGVVNNITRSNKS---HVLVGMGGWGKTVLASCLVRNEVIRSAFRDGTFWLGVGKGGKEQVSVLLQRLEKMMGLAPAKT-HEVLHQFDDVEQRVRHMSTFISKGNLKCLVVLDDVWEREVLEPFLSAGFQLLVTTRDESLILATNRRVCSQVGGMLEDEAVELLRRTCGAVGEVPKPDMQQASLIYDYLYVASDCDYSPLALSIIGSMDSLRADPLQPESWRSVHRSLADLLRVKK------DSLTGALSLCFDKLGTRMHQRLCKLAVLASGVLVPADMIAHLWE 1311
            G++  + V  L P+C AFK L +  +   E +D    L+  C     +++   +       V + ++   +  N++    +R + G K       R       D + +   E+ L++I +   LV+       F    PS     + +MA+VP G  +LP + +V R +++E V + +T   +S   + +VGMGG GK+VLAS  VR   +R  FR G FW+ VG+G K  +  LLQ L   +G AP    H V H  D +EQ  +H++   S G    LVVLDDVWEREV++ F+  GF++L+TTRD S++     R+  ++G M E+EA+ELLR+T G VG+ P  D++          V + C + PL L+I GSM  +R   L   +W  + + L ++ +  +       S+   L   FD L  R  +   K+AVLA+G L P +M+ +LWE
Sbjct:  117 GVLGVASVGPLVPVCEAFKALIEAAEGAAECQDKLQSLVSQCAFLATVLIQHGRAVGPLAQVQKPIQDFVVTTNELAGFAARWAKGGK------CRAFCCHRPDLSALAGFEECLRRIGSDIALVDGLEHHQSFLAALPSLLPPSLPDMAAVPTGALELPSSSYVERAAVQE-VADGLTTPEESRAPYTVVGMGGGGKSVLASAAVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAWDVGAAPTDAPHGVPHVLDRLEQVQQHLAAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGLPAGRL--ELGDMTEEEALELLRKTSGTVGQ-PGDDVRTKMT-----KVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKVVLETSFDSLAVRKQEEFLKMAVLAAGALAPIEMLRNLWE 558          
BLAST of mRNA_C-tenellus_contig11123.1.2 vs. uniprot
Match: D7G720_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI)

HSP 1 Score: 201 bits (512), Expect = 7.140e-53
Identity = 144/458 (31.44%), Postives = 235/458 (51.31%), Query Frame = 1
Query:    1 GLIEASDVRALKPICLAFKDLYDVVKSGLEVRDHSIVLLRSCLLAVNLVLDFPKTRRLPENVTEAMRKLTMEMNDMMEIISRLSGVKRKPTRNS--RKLIYPSRDRNIVTDHEKSLQQILA--VLVEASSQTDFF----PST--SVVKEMASVPVGTPKLPLA-FVRRESLEEGVVNNITRSNKS---HVLVGMGGWGKTVLASCLVRNEVIRSAFRDGTFWLGVGKGGKEQVSVLLQRLEKMMGLAPAKTH-EVLHQFDDVEQRVRHMSTFISKGNLKCLVVLDDVWEREVLEPFLSAGFQLLVTTRDESLILATNRRVCSQVGGMLEDEAVELLRRTCGAVGEVPKPDMQQASLIYDYLYVASDCDYSPLALSIIGSMDSLRADPLQPESWRSVHRSLADLLRVKK------DSLTGALSLCFDKLGTRMHQRLCKLAVLASGVLVPADMIAHLWE 1311
            G++  + V  L P+C AFK L +  +   E +D    L+  C     +++   +           + ++   + D +   + L+G   +  +    R       D + +   E+ L++I +   LV+       F    PS     + +MA+VP G  +LP + +V R +++E V + +T   +S   + +VGMGG GK+VLAS +VR   +R  FR G FW+ VG+G K  +  LLQ L + +G AP      V    D +EQ  +H++   S G  + LVVLDDVWEREV++ F+  GF++L+TTRD S++     R+  ++G + E+EA+ELLR+T GAVG+ P  D++          V + C + PL L+I GSM  +R   L   +W  + + L ++ +  +       S+   L   FD L  R  +   K+AVLA+G L P +M+ +LWE
Sbjct:  100 GVLGVASVGPLVPVCEAFKALIEAAEGAAECQDKLQSLVSQCAFLATVLIQHGRA-------VGPLAQVQKPIQDFVATTNELAGFAARWAKGGKCRAFFCHRPDLSALAGFEECLRRIRSDIALVDGLEHHQSFLAALPSLLPPSLPDMAAVPAGALELPSSSYVERAAVQE-VADGLTAPEESRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLARDVGAAPTDAPCGVPRVLDSLEQVRQHLAAVTSTGTSQRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRL--ELGDVTEEEALELLRKTSGAVGQ-PGDDVRTKMT-----KVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKVVLETSFDSLAVRKQEEFLKMAVLAAGALAPIEMLRNLWE 541          
BLAST of mRNA_C-tenellus_contig11123.1.2 vs. uniprot
Match: A0A6H5KXS7_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE)

HSP 1 Score: 194 bits (494), Expect = 1.460e-51
Identity = 140/442 (31.67%), Postives = 225/442 (50.90%), Query Frame = 1
Query:    1 GLIEASDVRALKPICLAFKDLYDVVKSGLEVRDHSIVLLRSCLLAVNLVLDFPKTRRLPENVTEAMRKLTMEMNDMMEIISRLSGVKRKPTRNSRKLIYPSRDRNIVTDHEKSLQQILA--VLVEASSQTDFF----PST--SVVKEMASVPVGTPKLPLA-FVRRESLEEGVVNNITRSNKS---HVLVGMGGWGKTVLASCLVRNEVIRSAFRDGTFWLGVGKGGKEQVSVLLQRLEKMMGLAPAKT-HEVLHQFDDVEQRVRHMSTFISKGNLKCLVVLDDVWEREVLEPFLSAGFQLLVTTRDESLILATNRRVCSQVGGMLEDEAVELLRRTCGAVGEVPKPDMQQASLIYDYLYVASDCDYSPLALSIIGSMDSLRADPLQPESWRSVHRSLADLLRVKK------DSLTGALSLCFDKLGTRMHQRLCKLAVLAS 1269
            G+++ + V  L P+C AFK L +  +   E +     L+  C     +++   +       V + +    +  ND+    +R +   +      R       D + + D E+ L++I +   LV+       F    PS     + +MA+VP G  +LP + +V R +++E V + +T        + +VGMGG GK+VLAS +VR   +R  FR G FW+ VG+G K  +  LLQ L + MG A     H V H  D +EQ  +H++   S G    LVVLDDVWEREV++ F+  GF++L+TTRD S+++    R+  +VG M E+EA+ELLR++ GAVG+ P  D++          V + C + PL L+I GSM  ++   L   +W+ +  +L ++ +  +       S+   L   FD L  R  +   KLAVLA+
Sbjct:   63 GVLDVASVGPLVPVCEAFKALIEAAEGAAESQHKLQSLVSQCAFLATVLIQHGRAVGPLAQVHKPIEDFVVTTNDLAGFAARWANGGK-----CRAFFCHRPDLSALADFEECLRRIRSDIALVDGLEHHQSFLAALPSLLPPSLPDMAAVPAGALELPCSSYVERAAVQE-VADGLTSPEDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAREMGAARTDAPHTVPHVLDGLEQVKQHLAAVASTGTFPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVVVPAGRL--EVGDMTEEEALELLRKSSGAVGQ-PGDDVRTKMT-----KVVALCGHLPLVLAIAGSMSVVKGKGLTAVAWKELAENLENVAKKMRARGEQSSSINAVLETSFDSLAVRKQEEFLKLAVLAA 490          
BLAST of mRNA_C-tenellus_contig11123.1.2 vs. uniprot
Match: D8LGG5_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG5_ECTSI)

HSP 1 Score: 196 bits (499), Expect = 4.020e-51
Identity = 138/458 (30.13%), Postives = 233/458 (50.87%), Query Frame = 1
Query:    1 GLIEASDVRALKPICLAFKDLYDVVKSGLEVRDHSIVLLRSCLLAVNLVLDFPKTRRLPENVTEAMRKLTMEMNDMMEIISRLSGVKRKPTRNS--RKLIYPSRDRNIVTDHEKSLQQILA--VLVEASSQTDFF----PSTSVVK--EMASVPVGTPKLPLAFVRRESLEEGVVNNITRSNKS---HVLVGMGGWGKTVLASCLVRNEVIRSAFRDGTFWLGVGKGGKEQVSVLLQRLEKMMGLAPAKT-HEVLHQFDDVEQRVRHMSTFI-SKGNLKCLVVLDDVWEREVLEPFLSAGFQLLVTTRDESLILATNRRVCSQVGGMLEDEAVELLRRTCGAVGEVPKPDMQQASLIYDYLYVASDCDYSPLALSIIGSMDSLRADPLQPESWRSVHRSLADLLRVKK------DSLTGALSLCFDKLGTRMHQRLCKLAVLASGVLVPADMIAHLWE 1311
            G+++ + V  L P+C A K L +  +   E  D    L+  C     +++   +          A+ ++   + D +   + L+G   +  ++   R       D + +   E+ L+ I +   LV+   Q   F    PS    +  +MA+VP G   LP  +V R +++E V + +T   +    + +VG+GG GK+VLAS +VR   +R  FR G  W+ VG+G K  +  LLQ L + MG+AP    H V    D +EQ  +H++  + S G    LVVLDDVWEREV++  +  GF++L+TTRD S+++   RR+   +G M E+EA+ELLR+T G VG+    D  +  +      V + C + PL L+I GSM +++   L   +W  + +S  ++ +  +       ++   L   FD L  +  +   +++VLA+G L P +M+ +LWE
Sbjct:   75 GVLDVASVGPLVPVCQALKALIEAAEGAAECEDKVQSLVSQCAFLATVLIQHGRA-------VGALAQVHKPIQDFVVTTNELAGFAARWAKDGKCRAFFCHRPDLSALAGFEECLRGIRSDIALVDGLEQHQLFLAALPSLRPPRLLDMAAVPAGALDLPRGYVERAAVQE-VADGLTAPEEPRAPYTVVGLGGGGKSVLASAVVRKPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREMGVAPTDAPHAVPQVLDSLEQVQQHLAAVVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDWSVVVVPARRL--DLGDMTEEEALELLRKTSGTVGQ--PGDYVRMKMTK----VVALCGHLPLVLAIAGSMSAVKGKGLTAVAWEELAKSFENVAKKMRARGQQSSAIKVVLETSFDSLAVQKQEEFLRMSVLAAGALAPIEMLRNLWE 516          
BLAST of mRNA_C-tenellus_contig11123.1.2 vs. uniprot
Match: D7FUD7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD7_ECTSI)

HSP 1 Score: 192 bits (487), Expect = 1.370e-49
Identity = 124/345 (35.94%), Postives = 193/345 (55.94%), Query Frame = 1
Query:  331 EKSLQQI---LAVLVEASSQ----TDFFPSTSVVKEMASVPVGTPKLP-LAFVRRESLEEGVVNNITRSNKS---HVLVGMGGWGKTVLASCLVRNEVIRSAFRDGTFWLGVGKGGKEQVSVLLQRLEKMMGLAPAKT-HEVLHQFDDVEQRVRHMSTFISKGNLKCLVVLDDVWEREVLEPFLSAGFQLLVTTRDESLILATNRRVCSQVGGMLEDEAVELLRRTCGAVGEVPKPDMQQASLIYDYLYVASDCDYSPLALSIIGSMDSLRADPLQPESWRSVHRSLADLLRVKK------DSLTGALSLCFDKLGTRMHQRLCKLAVLASGVLVPADMIAHLWE 1311
            EK LQ+I   +  +V+A +     TD  P +  + +MA VPVG  +LP  ++V R +++E V + +T   +    + +VG+GG GK+VLAS +VR   +R  FR G  W+ VG+G K  +  LLQ L + +G AP    H V H  D +EQ  +H++   S  N   LVVLDDVWEREV++ F+  GF+LL+TTRD S++     R+  ++G M E+EA+ELLR+T G V       M+   ++       + C + PL L+I GSM +++   L   +W  + +   ++ +  +       S+   L   FD L TR  +    +AVLA+G L P +M+++LWE
Sbjct:   10 EKKLQEIGGDVCRVVDAIAAKRIFTDILPPS--LPDMAEVPVGALELPHSSYVERAAVQE-VADGLTNPEEPRTPYTVVGIGGGGKSVLASAVVRMPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREVGAAPTDAPHGVPHALDSLEQVQQHLAAVASTRNSPRLVVLDDVWEREVVDAFVPLGFKLLLTTRDRSIVCDPAGRL--ELGDMTEEEALELLRKTSGTVDPGDDVRMKMTKVV-------ALCGHLPLVLAIAGSMSAVKGKGLTAVAWEELAKEFENVAKKMRARGQQSSSIKVVLETTFDSLATRKQKEFLMMAVLAAGALAPIEMLSNLWE 342          
BLAST of mRNA_C-tenellus_contig11123.1.2 vs. uniprot
Match: D8LPV9_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPV9_ECTSI)

HSP 1 Score: 188 bits (478), Expect = 1.900e-48
Identity = 114/318 (35.85%), Postives = 175/318 (55.03%), Query Frame = 1
Query:  385 DFFPSTSVVKEMASVPVGTPKLPLAFVRRESLEE--GVVNNITRSNKSHVLVGMGGWGKTVLASCLVRNEVIRSAFRDGTFWLGVGKGGKEQVSVLLQRLEKMMGLAPAKT-HEVLHQFDDVEQRVRHMSTFISKGNLKCLVVLDDVWEREVLEPFLSAGFQLLVTTRDESLILATNRRVCSQVGGMLEDEAVELLRRTCGAVGEVPKPDMQQASLIYDYLYVASDCDYSPLALSIIGSMDSLRADPLQPESWRSVHRSLADLLRV------KKDSLTGALSLCFDKLGTRMHQRLCKLAVLASGVLVPADMIAHLWE 1311
            D  P T  + + A+VP G   LP ++V R  ++E  G + +  ++   +++VGMGG GKTVLAS LVR   +   FR G FW+ +G+G  + +   LQ L + MG AP    H V H FD +EQ ++H++  +S+G+   LVVLDDVWEREV+  FL  G ++LVTTRD S++      +  ++G M EDEA+ELL +T G VG+       Q + + D       C   PL L+I GSM  ++   L+  +W  +     ++  +      +  +L   L   F+ L  R  +   ++AVLA G + P +M+ +LWE
Sbjct:  228 DVLPPT--LPQRAAVPTGALALPRSYVERPGVQEAMGDLMDPEKALAPYMIVGMGGGGKTVLASALVRKSSVLEHFRGGIFWMEMGRGANKSLLHRLQGLAREMGAAPTDAPHGVPHVFDSLEQVMQHLAAVVSRGSSPRLVVLDDVWEREVVAAFLGVGLKVLVTTRDRSIVGVPGGLL--ELGDMAEDEALELLWKTSGTVGQPGDGVRTQMTKVVDR------CGRLPLVLAIAGSMPVVKGKGLKDGAWEELIEEFENVTTIMWEPGEESRNLDMVLGASFNALAARKREEFLRMAVLAPGAVAPFEMLRNLWE 535          
BLAST of mRNA_C-tenellus_contig11123.1.2 vs. uniprot
Match: A0A6H5LJA6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJA6_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 4.100e-48
Identity = 113/308 (36.69%), Postives = 172/308 (55.84%), Query Frame = 1
Query:  418 MASVPVGTPKLPLAFVRRESLEEGVVNNITRSNKS---HVLVGMGGWGKTVLASCLVRNEVIRSAFRDGTFWLGVGKGGKEQVSVLLQRLEKMMGLAPAKT-HEVLHQFDDVEQRVRHMSTFISKGNLKCLVVLDDVWEREVLEPFLSAGFQLLVTTRDESLILATNRRVCSQVGGMLEDEAVELLRRTCGAVGEVPKPDMQQASLIYDYLYVASDCDYSPLALSIIGSMDSLRADPLQPESWRSVHR---SLADLLRVKKD---SLTGALSLCFDKLGTRMHQRLCKLAVLASGVLVPADMIAHLWE 1311
            MA+VP G   LP ++V R +++E V + + +  +    + +VGMGG GKT+L S +VR   +R  FR G FW+ VG+  K  +  LLQ L + M  AP  T H V H  + +EQ  +H++T  S G    LVVLDDVWEREV++  LS G ++LVTTRD S++  +   +  ++G M E+EA+ELL +T   VG+       Q + +         C + PL L+I GSM  ++   L   +W  + +   ++A  +RV+ +   S+   L   FD L  R  +   K+ VLA+G L P +M+ +LWE
Sbjct:    1 MAAVPAGALTLPQSYVERAAVQE-VADGLIKPEEPRAPYAVVGMGGGGKTMLVSAVVRKSNVREHFRGGVFWMRVGRHAKNSLLSLLQGLAREMSAAPTDTPHGVPHVLESLEQVKQHLATVASAGTSPRLVVLDDVWEREVVDALLSLGLKVLVTTRDRSVVGVSGGLL--ELGDMTEEEALELLLKTSRTVGQPGHEVRTQMTKVVVL------CGHLPLVLAIAGSMSVVKGKGLTAVAWEELIKEFENVAKKMRVRGEQSSSIKVVLGTSFDALAARKQEESLKMTVLAAGALAPIEMLRNLWE 299          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11123.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L982_9PHAE7.730e-7435.48NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LL58_ECTSI4.880e-6234.29NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7FH19_ECTSI1.970e-5732.59NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7G722_ECTSI1.080e-5332.39NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7G720_ECTSI7.140e-5331.44NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KXS7_9PHAE1.460e-5131.67NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LGG5_ECTSI4.020e-5130.13NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7FUD7_ECTSI1.370e-4935.94NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D8LPV9_ECTSI1.900e-4835.85NB-ARC and TPR repeat-containig protein n=1 Tax=Ec... [more]
A0A6H5LJA6_9PHAE4.100e-4836.69NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig11123contigC-tenellus_contig11123:885..2611 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LL58
PFAMsNB-ARC,TPR_10,TPR_12,TPR_16,TPR_4,TPR_7,TPR_8
Model size1341
Max annot lvl2759|Eukaryota
KEGG koko:K10407
KEGG Pathwayko05132,map05132
Hectar predicted targeting categoryother localisation
Exons2
Evalue8e-63
EggNOG OGsCOG0457@1|root,KOG4658@1|root,KOG1840@2759|Eukaryota,KOG4658@2759|Eukaryota
DescriptionADP binding
Cds size1341
COG categoryS
BRITEko00000,ko00001,ko03019,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789164.4353633-CDS-C-tenellus_contig11123:884..19251680789164.4353633-CDS-C-tenellus_contig11123:884..1925Choristocarpus tenellus KU2346CDSC-tenellus_contig11123 885..1925 +
1680789164.4460173-CDS-C-tenellus_contig11123:2311..26111680789164.4460173-CDS-C-tenellus_contig11123:2311..2611Choristocarpus tenellus KU2346CDSC-tenellus_contig11123 2312..2611 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig11123.1.2prot_C-tenellus_contig11123.1.2Choristocarpus tenellus KU2346polypeptideC-tenellus_contig11123 885..2611 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig11123.1.2

>prot_C-tenellus_contig11123.1.2 ID=prot_C-tenellus_contig11123.1.2|Name=mRNA_C-tenellus_contig11123.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=447bp
GLIEASDVRALKPICLAFKDLYDVVKSGLEVRDHSIVLLRSCLLAVNLVL
DFPKTRRLPENVTEAMRKLTMEMNDMMEIISRLSGVKRKPTRNSRKLIYP
SRDRNIVTDHEKSLQQILAVLVEASSQTDFFPSTSVVKEMASVPVGTPKL
PLAFVRRESLEEGVVNNITRSNKSHVLVGMGGWGKTVLASCLVRNEVIRS
AFRDGTFWLGVGKGGKEQVSVLLQRLEKMMGLAPAKTHEVLHQFDDVEQR
VRHMSTFISKGNLKCLVVLDDVWEREVLEPFLSAGFQLLVTTRDESLILA
TNRRVCSQVGGMLEDEAVELLRRTCGAVGEVPKPDMQQASLIYDYLYVAS
DCDYSPLALSIIGSMDSLRADPLQPESWRSVHRSLADLLRVKKDSLTGAL
SLCFDKLGTRMHQRLCKLAVLASGVLVPADMIAHLWEQVCSLSVCV*
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mRNA from alignment at C-tenellus_contig11123:885..2611+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig11123.1.2 ID=mRNA_C-tenellus_contig11123.1.2|Name=mRNA_C-tenellus_contig11123.1.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1727bp|location=Sequence derived from alignment at C-tenellus_contig11123:885..2611+ (Choristocarpus tenellus KU2346)
GGCCTCATTGAGGCATCTGATGTGAGAGCTCTGAAGCCAATTTGCCTGGC GTTCAAGGACTTGTATGATGTGGTGAAGTCAGGTCTCGAGGTACGAGATC ACTCCATTGTTTTGCTAAGATCGTGCTTGCTGGCGGTGAACCTTGTCCTA GATTTTCCAAAGACACGCCGACTACCCGAAAATGTGACAGAGGCCATGAG GAAACTTACTATGGAAATGAATGATATGATGGAGATTATATCGCGCTTAA GTGGGGTGAAGCGAAAGCCCACCCGTAACTCGCGAAAGCTGATATACCCA TCACGCGATAGGAATATCGTTACTGATCATGAGAAGAGTCTACAACAAAT ATTAGCCGTCTTGGTGGAAGCAAGCAGCCAGACGGATTTCTTCCCCTCCA CGTCTGTGGTGAAGGAGATGGCGAGCGTGCCAGTGGGCACACCGAAACTT CCCCTAGCTTTTGTTCGACGAGAGTCTCTGGAGGAAGGTGTGGTTAACAA CATCACCAGGTCCAACAAATCTCACGTACTAGTTGGTATGGGGGGATGGG GCAAGACTGTTTTGGCATCATGCCTGGTACGGAATGAGGTGATCCGGAGT GCATTTCGCGATGGAACGTTCTGGCTCGGTGTGGGCAAGGGGGGCAAGGA GCAGGTGTCCGTTCTCCTCCAGAGACTGGAGAAGATGATGGGATTAGCAC CAGCAAAGACCCATGAAGTCCTGCACCAGTTCGATGATGTAGAGCAAAGA GTGCGGCACATGTCCACCTTTATATCAAAGGGGAACTTGAAGTGTCTGGT TGTCCTGGATGACGTATGGGAGAGGGAGGTGCTAGAGCCCTTTCTTTCTG CCGGTTTCCAGCTGCTAGTCACCACACGTGACGAGTCATTGATTCTGGCG ACAAATCGAAGGGTTTGTTCTCAGGTTGGAGGAATGCTGGAAGATGAAGC GGTGGAATTACTGAGGAGAACCTGCGGGGCTGTGGGAGAGGTGCCCAAGC CGGATATGCAACAGGCGAGCTTGATTTATGACTATCTATATGTGCCTGTT ACCGACAATGAGCAATGCATGCCAACAGTTGATTGCATAAATTCAAGCAG GATAGAATACTCCTGCCATACTACACACTGCTCATGCCTTCAGATGATAA ACATAGTAGATGAAATAGTGGCAATCTTGCATCAAGTTGTGTTGTGCCCC TTTCGTCCAGTCTTTGTCTCCGCTCCTCCTTACCACATCTGCTAAGTGTC CTGTGGGTAGAAAGTAATGTGCATGTATTGGAGGTGGTAAGTGTGATGTA TGTTTTGTGTAAGGCACGTATGGTGTGTATTGTCGCTGGGTCTCTATCTT TGCGTCTCTTCCCATTGTCAATGGATGAAAATTGGTTCTTCTGTTGACTT TCGTTCTTGGTTTTAACCCTGATGAAGGTGGCCAGTGACTGCGACTATTC CCCTCTGGCACTTTCCATCATTGGATCCATGGATTCGCTGAGGGCTGACC CTCTACAACCAGAGTCTTGGAGGAGTGTGCACAGGAGCCTTGCAGATTTG CTTAGGGTGAAGAAAGACTCACTCACTGGAGCCCTATCTCTTTGCTTTGA CAAGCTGGGTACAAGGATGCATCAGAGATTATGCAAGCTCGCCGTGCTAG CGTCGGGCGTTCTTGTGCCTGCTGACATGATTGCACATCTATGGGAGCAG GTTTGTTCTCTTTCAGTATGTGTGTAA
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Coding sequence (CDS) from alignment at C-tenellus_contig11123:885..2611+

>mRNA_C-tenellus_contig11123.1.2 ID=mRNA_C-tenellus_contig11123.1.2|Name=mRNA_C-tenellus_contig11123.1.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=1341bp|location=Sequence derived from alignment at C-tenellus_contig11123:885..2611+ (Choristocarpus tenellus KU2346)
GGCCTCATTGAGGCATCTGATGTGAGAGCTCTGAAGCCAATTTGCCTGGC
GTTCAAGGACTTGTATGATGTGGTGAAGTCAGGTCTCGAGGTACGAGATC
ACTCCATTGTTTTGCTAAGATCGTGCTTGCTGGCGGTGAACCTTGTCCTA
GATTTTCCAAAGACACGCCGACTACCCGAAAATGTGACAGAGGCCATGAG
GAAACTTACTATGGAAATGAATGATATGATGGAGATTATATCGCGCTTAA
GTGGGGTGAAGCGAAAGCCCACCCGTAACTCGCGAAAGCTGATATACCCA
TCACGCGATAGGAATATCGTTACTGATCATGAGAAGAGTCTACAACAAAT
ATTAGCCGTCTTGGTGGAAGCAAGCAGCCAGACGGATTTCTTCCCCTCCA
CGTCTGTGGTGAAGGAGATGGCGAGCGTGCCAGTGGGCACACCGAAACTT
CCCCTAGCTTTTGTTCGACGAGAGTCTCTGGAGGAAGGTGTGGTTAACAA
CATCACCAGGTCCAACAAATCTCACGTACTAGTTGGTATGGGGGGATGGG
GCAAGACTGTTTTGGCATCATGCCTGGTACGGAATGAGGTGATCCGGAGT
GCATTTCGCGATGGAACGTTCTGGCTCGGTGTGGGCAAGGGGGGCAAGGA
GCAGGTGTCCGTTCTCCTCCAGAGACTGGAGAAGATGATGGGATTAGCAC
CAGCAAAGACCCATGAAGTCCTGCACCAGTTCGATGATGTAGAGCAAAGA
GTGCGGCACATGTCCACCTTTATATCAAAGGGGAACTTGAAGTGTCTGGT
TGTCCTGGATGACGTATGGGAGAGGGAGGTGCTAGAGCCCTTTCTTTCTG
CCGGTTTCCAGCTGCTAGTCACCACACGTGACGAGTCATTGATTCTGGCG
ACAAATCGAAGGGTTTGTTCTCAGGTTGGAGGAATGCTGGAAGATGAAGC
GGTGGAATTACTGAGGAGAACCTGCGGGGCTGTGGGAGAGGTGCCCAAGC
CGGATATGCAACAGGCGAGCTTGATTTATGACTATCTATATGTGGCCAGT
GACTGCGACTATTCCCCTCTGGCACTTTCCATCATTGGATCCATGGATTC
GCTGAGGGCTGACCCTCTACAACCAGAGTCTTGGAGGAGTGTGCACAGGA
GCCTTGCAGATTTGCTTAGGGTGAAGAAAGACTCACTCACTGGAGCCCTA
TCTCTTTGCTTTGACAAGCTGGGTACAAGGATGCATCAGAGATTATGCAA
GCTCGCCGTGCTAGCGTCGGGCGTTCTTGTGCCTGCTGACATGATTGCAC
ATCTATGGGAGCAGGTTTGTTCTCTTTCAGTATGTGTGTAA
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