mRNA_C-tenellus_contig1112.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig1112.1.1
Unique NamemRNA_C-tenellus_contig1112.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
[Close]
BLAST of mRNA_C-tenellus_contig1112.1.1 vs. uniprot
Match: A0A8K1CNQ3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNQ3_PYTOL)

HSP 1 Score: 139 bits (349), Expect = 3.090e-29
Identity = 82/203 (40.39%), Postives = 106/203 (52.22%), Query Frame = 1 
Query: 3010 VLSQQLEEEDKECSVCSNPLSCDGDPIILCDGLGCRMAVHASCYGVDNIPKEDWLCEPCVHALSAHGGDGIGSRSSSDPKLALNLLGLRPKCALCQHRGGALKQSECGQWAHVVCVLWTPEL---LTRGASVRPITLSTLDADRANLMCSICRGI-GDAVVQCAHPPCLKAVHPFCAQR--ASLLLEEEGVGGGFELR-CRMH 3597
            V +Q+ EE+D+ C++CS   S + DPI+ C G  C +AVH  CYG+  +P +DW C+ C         DG  S                 +CALC  RGGA ++S CGQW HV C LW PEL    T G  +    LS LD +R  L CS+C    G  +VQCAH  CL A H  CA+   ASL+  E+  G    L  CR+H
Sbjct: 1161 VGTQREEEDDECCAICSEHESYEDDPIVFCGG--CNVAVHQFCYGIPRLPTDDWFCDFCASQ------DGSSSA----------------RCALCPLRGGAFRRSSCGQWVHVQCYLWIPELKFKYTSGGLLSLGVLSRLDPERKTLECSLCHSTQGRGLVQCAHKRCLTAFHVSCARHGDASLVQMEQDDGQTLFLTYCRLH 1339
[Close]
BLAST of mRNA_C-tenellus_contig1112.1.1 vs. uniprot
Match: A0A5D6XND3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XND3_9STRA)

HSP 1 Score: 134 bits (338), Expect = 6.480e-28
Identity = 83/199 (41.71%), Postives = 107/199 (53.77%), Query Frame = 1 
Query: 3046 CSVCSNPLSCDGDPIILCDGLGCRMAVHASCYGVDNIPKEDWLCEPCVHALSAHGGDGIGSRSSSDPKLALNLLGLRPKCALCQHRGGALKQSECGQWAHVVCVLWTPELLTRGASVRPI----TLSTLDADRANLMCSICRGI-GDAVVQCAHPPCLKAVHPFCAQRASL-LLEEEGVGGG---FELRCRMHSEVRRQ 3615
            CSVC    S + DPI+ CDG  C + VH  CYG+  +P   W C+ C    + H      SR+S+ P          P CALC  RGGA+K ++CG WAHV C +W PEL  R A+ R +    +L+ LD DRA L C++C    G  V+QCA+  CL A H  CA  A   L++EE  GGG   F   C +H   RRQ
Sbjct: 1411 CSVCLEVESYEDDPIVYCDG--CELGVHQFCYGIAALPSGSWFCDSCA---TTHP-----SRASTTPAF---FKPRAPSCALCPLRGGAMKPTQCGHWAHVQCFMWLPEL--RLATDREVLALGSLANLDPDRATLECTLCHSRKGRGVIQCAYKRCLAAFHVSCAAFAQYALVQEEQDGGGDTLFLAYCPLHG--RRQ 1592
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BLAST of mRNA_C-tenellus_contig1112.1.1 vs. uniprot
Match: A0A8D2P1M0_ZOSLA (Uncharacterized protein n=1 Tax=Zosterops lateralis melanops TaxID=1220523 RepID=A0A8D2P1M0_ZOSLA)

HSP 1 Score: 119 bits (299), Expect = 1.140e-26
Identity = 68/182 (37.36%), Postives = 89/182 (48.90%), Query Frame = 1 
Query: 3046 CSVCSNPLSCDGDPIILCDGLGCRMAVHASCYGVDNIPKEDWLCEPCVHALSAHGGDGIGSRSSSDPKLALNLLGLRPKCALCQHRGGALKQSECGQWAHVVCVLWTPELLTRGAS-VRPITLSTLDADRANLMCSICRGIG-------DAVVQCAHPPCLKAVHPFCAQRASLLLEEEGVG 3567
            C VCS+      +P++ CDG GC +AVH +CYG+  +P   W C  C                 S  + A      R +C LC H+ GALK+++ G WAHVVC L+ PE+     S + PI L ++  DR N  C IC   G        A + C    C +A H  CAQ A LL EEEG G
Sbjct:    8 CCVCSDERGWAENPLVYCDGHGCNVAVHQACYGIVQVPTGPWFCRKC----------------ESQERAA------RVRCELCPHKDGALKRTDNGGWAHVVCALYIPEVQFANVSTMEPIVLQSVPHDRYNKTCYICDEQGRESKAATGACMTCNKHGCRQAFHVTCAQFAGLLCEEEGNG 167
[Close]
BLAST of mRNA_C-tenellus_contig1112.1.1 vs. uniprot
Match: UPI0006D8E3E0 (protein AF-17-like n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=UPI0006D8E3E0)

HSP 1 Score: 117 bits (294), Expect = 2.690e-26
Identity = 66/181 (36.46%), Postives = 89/181 (49.17%), Query Frame = 1 
Query: 3046 CSVCSNPLSCDGDPIILCDGLGCRMAVHASCYGVDNIPKEDWLCEPCVHALSAHGGDGIGSRSSSDPKLALNLLGLRPKCALCQHRGGALKQSECGQWAHVVCVLWTPELLTRGA-SVRPITLSTLDADRANLMCSICRGIG-------DAVVQCAHPPCLKAVHPFCAQRASLLLEEEGV 3564
            C VCS+      +P++ CDG GC +AVH +CYG+  +P   W C  C                 S  + A      R +C LC H+ GALK+++ G WAHVVC L+ PE+      ++ PI L  +  DR N  C IC   G        A + C    C +A H  CAQ A+LL EEEG+
Sbjct:    8 CCVCSDERGWAENPLVYCDGHGCSVAVHQACYGIVQVPTGPWFCRKC----------------ESQERAA------RVRCELCPHKDGALKRTDNGGWAHVVCALYIPEVQFANVFTMEPIVLQYVTHDRYNKTCYICEEQGRESKAASGACMTCNWHGCRQAFHVTCAQMANLLCEEEGL 166
[Close]
BLAST of mRNA_C-tenellus_contig1112.1.1 vs. uniprot
Match: UPI001F07364F (protein AF-10 n=1 Tax=Hypomesus transpacificus TaxID=137520 RepID=UPI001F07364F)

HSP 1 Score: 119 bits (299), Expect = 2.950e-26
Identity = 67/192 (34.90%), Postives = 94/192 (48.96%), Query Frame = 1 
Query: 3010 VLSQQLEEEDKECSVCSNPLSCDGDPIILCDGLGCRMAVHASCYGVDNIPKEDWLCEPCVHALSAHGGDGIGSRSSSDPKLALNLLGLRPKCALCQHRGGALKQSECGQWAHVVCVLWTPEL-LTRGASVRPITLSTLDADRANLMCSICRGIG-------DAVVQCAHPPCLKAVHPFCAQRASLLLEEEG 3561
            +L   ++E    C VCS+      +P++ CDG GC +AVH +CYG+  +P   W C  C                 S  + A      R +C LC H+ GALK+++ G WAHVVC L+ PE+     +++ PI L ++  DR N  C IC   G        A + C    C +A H  CAQ A LL EE+G
Sbjct:   14 ILVNNMKEMIGGCCVCSDERGWAENPLVYCDGHGCNVAVHQACYGIVQVPTGPWFCRKC----------------ESQERAA------RVRCELCPHKDGALKRTDNGGWAHVVCALYIPEVEFANVSTMEPIVLQSVPHDRYNKTCYICEDQGRESKAASGACMTCNKHGCRQAFHVTCAQFAGLLCEEQG 183
[Close]
BLAST of mRNA_C-tenellus_contig1112.1.1 vs. uniprot
Match: A0A6P5CSQ4_BOSIN (protein AF-10-like n=2 Tax=Laurasiatheria TaxID=314145 RepID=A0A6P5CSQ4_BOSIN)

HSP 1 Score: 120 bits (300), Expect = 4.230e-26
Identity = 70/193 (36.27%), Postives = 94/193 (48.70%), Query Frame = 1 
Query: 3013 LSQQLEEEDKECSVCSNPLSCDGDPIILCDGLGCRMAVHASCYGVDNIPKEDWLCEPCVHALSAHGGDGIGSRSSSDPKLALNLLGLRPKCALCQHRGGALKQSECGQWAHVVCVLWTPELLTRGAS-VRPITLSTLDADRANLMCSICRGIG-------DAVVQCAHPPCLKAVHPFCAQRASLLLEEEGVG 3567
            +S  ++E    C VCS+      +P++ CDG GC +AVH +CYG+  +P   W C  C                 S  + A      R +C LC H+ GALK+++ G WAHVVC L+ PE+     S + PI L ++  DR N  C IC   G        A + C    C +A H  CAQ A LL EEEG G
Sbjct:   14 VSHSMKEMIGGCCVCSDERGWAENPLVYCDGHGCSVAVHQACYGIVQVPTGPWFCRKC----------------ESQERAA------RVRCELCPHKDGALKRTDNGGWAHVVCALYIPEVQFANVSTMEPIVLQSVPHDRYNKTCYICDEQGRESKAATGACMTCNKHGCRQAFHVTCAQFAGLLCEEEGNG 184
[Close]
BLAST of mRNA_C-tenellus_contig1112.1.1 vs. uniprot
Match: A0A6I9P609_9TELE (protein AF-10-like n=1 Tax=Notothenia coriiceps TaxID=8208 RepID=A0A6I9P609_9TELE)

HSP 1 Score: 118 bits (296), Expect = 8.330e-26
Identity = 65/180 (36.11%), Postives = 89/180 (49.44%), Query Frame = 1 
Query: 3046 CSVCSNPLSCDGDPIILCDGLGCRMAVHASCYGVDNIPKEDWLCEPCVHALSAHGGDGIGSRSSSDPKLALNLLGLRPKCALCQHRGGALKQSECGQWAHVVCVLWTPEL-LTRGASVRPITLSTLDADRANLMCSICRGIG-------DAVVQCAHPPCLKAVHPFCAQRASLLLEEEG 3561
            C VCS+      +P++ CDG GC +AVH +CYG+  +P   W C  C                 S  + A      R +C LC H+ GALK+++ G WAHVVC L+ PE+     +++ PI L ++  DR N  C IC   G        A + C    C +A H  CAQ A LL EE+G
Sbjct:   26 CCVCSDERGWAENPLVYCDGHGCNVAVHQACYGIVQVPTGPWFCRKC----------------ESQERAA------RVRCELCPHKDGALKRTDNGGWAHVVCALYIPEVEFANVSTMEPIVLQSVPHDRYNKTCYICEDQGRESKAATGACMTCNKHGCRQAFHVTCAQFAGLLCEEQG 183
[Close]
BLAST of mRNA_C-tenellus_contig1112.1.1 vs. uniprot
Match: A0A668T0P7_OREAU (Uncharacterized protein n=1 Tax=Oreochromis aureus TaxID=47969 RepID=A0A668T0P7_OREAU)

HSP 1 Score: 117 bits (294), Expect = 1.090e-25
Identity = 65/180 (36.11%), Postives = 87/180 (48.33%), Query Frame = 1 
Query: 3046 CSVCSNPLSCDGDPIILCDGLGCRMAVHASCYGVDNIPKEDWLCEPCVHALSAHGGDGIGSRSSSDPKLALNLLGLRPKCALCQHRGGALKQSECGQWAHVVCVLWTPEL-LTRGASVRPITLSTLDADRANLMCSICRGIG-------DAVVQCAHPPCLKAVHPFCAQRASLLLEEEG 3561
            C VCS+      +P++ CDG GC +AVH +CYG+  +P   W C  C                 S  + A      R +C LC H+ GALK+++ G WAHVVC L+ PE+      ++ PI L  +  +R N  C IC   G        A + C    C +A H  CAQ A LL EEEG
Sbjct:    8 CCVCSDERGWAENPLVYCDGHGCSVAVHQACYGIVQVPTGPWFCRKC----------------ESQERAA------RVRCELCPHKDGALKRTDSGGWAHVVCALYIPEVQFANVLTMEPIILQYVPHERYNKTCYICEDHGRESKAACGACMTCNRQGCRQAFHVTCAQMAGLLCEEEG 165
[Close]
BLAST of mRNA_C-tenellus_contig1112.1.1 vs. uniprot
Match: A0A674DQ95_SALTR (MLLT10 histone lysine methyltransferase DOT1L cofactor n=4 Tax=Salmoninae TaxID=504568 RepID=A0A674DQ95_SALTR)

HSP 1 Score: 120 bits (301), Expect = 1.280e-25
Identity = 68/194 (35.05%), Postives = 95/194 (48.97%), Query Frame = 1 
Query: 3004 NRVLSQQLEEEDKECSVCSNPLSCDGDPIILCDGLGCRMAVHASCYGVDNIPKEDWLCEPCVHALSAHGGDGIGSRSSSDPKLALNLLGLRPKCALCQHRGGALKQSECGQWAHVVCVLWTPEL-LTRGASVRPITLSTLDADRANLMCSICRGIG-------DAVVQCAHPPCLKAVHPFCAQRASLLLEEEG 3561
            N  L+  ++E    C VCS+      +P++ CDG GC +AVH +CYG+  +P   W C  C                 S  + A      R +C LC H+ GALK+++ G WAHVVC L+ PE+     +++ PI L ++  DR N  C IC   G        A + C    C +A H  CAQ A LL EE+G
Sbjct:   12 NDFLANNMKEMIGGCCVCSDERGWAENPLVYCDGHGCNVAVHQACYGIVQVPTGPWFCRKC----------------ESQERAA------RVRCELCPHKDGALKRTDNGGWAHVVCALYIPEVEFANVSTMEPIVLQSVPHDRYNKKCYICEDQGRESKAATGACMTCNKHGCRQAFHVTCAQFAGLLCEEQG 183
[Close]
BLAST of mRNA_C-tenellus_contig1112.1.1 vs. uniprot
Match: A0A2D4FZ05_MICCO (Uncharacterized protein (Fragment) n=1 Tax=Micrurus corallinus TaxID=54390 RepID=A0A2D4FZ05_MICCO)

HSP 1 Score: 117 bits (292), Expect = 1.490e-25
Identity = 65/179 (36.31%), Postives = 86/179 (48.04%), Query Frame = 1 
Query: 3046 CSVCSNPLSCDGDPIILCDGLGCRMAVHASCYGVDNIPKEDWLCEPCVHALSAHGGDGIGSRSSSDPKLALNLLGLRPKCALCQHRGGALKQSECGQWAHVVCVLWTPEL-LTRGASVRPITLSTLDADRANLMCSICRGIG-------DAVVQCAHPPCLKAVHPFCAQRASLLLEEE 3558
            C VCS+      +P++ CDG GC +AVH +CYG+  +P   W C  C                 S  + A      R +C LC H+ GALK+++ G WAHVVC L+ PE+      ++ PI L  +  DR N  C IC   G        A + C    C +A H  CAQ A LL EEE
Sbjct:    8 CCVCSDERGWAENPLVYCDGHGCNVAVHQACYGIVQVPTGPWFCRKC----------------ESQERAA------RVRCELCPHKDGALKRTDSGGWAHVVCALYIPEVQFANVLTMEPIVLQYVPHDRFNKTCYICEEQGRESKAASGACMTCNRHGCRQAFHVTCAQMAGLLCEEE 164
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1112.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8K1CNQ3_PYTOL3.090e-2940.39Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XND3_9STRA6.480e-2841.71Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A8D2P1M0_ZOSLA1.140e-2637.36Uncharacterized protein n=1 Tax=Zosterops laterali... [more]
UPI0006D8E3E02.690e-2636.46protein AF-17-like n=1 Tax=Latimeria chalumnae Tax... [more]
UPI001F07364F2.950e-2634.90protein AF-10 n=1 Tax=Hypomesus transpacificus Tax... [more]
A0A6P5CSQ4_BOSIN4.230e-2636.27protein AF-10-like n=2 Tax=Laurasiatheria TaxID=31... [more]
A0A6I9P609_9TELE8.330e-2636.11protein AF-10-like n=1 Tax=Notothenia coriiceps Ta... [more]
A0A668T0P7_OREAU1.090e-2536.11Uncharacterized protein n=1 Tax=Oreochromis aureus... [more]
A0A674DQ95_SALTR1.280e-2535.05MLLT10 histone lysine methyltransferase DOT1L cofa... [more]
A0A2D4FZ05_MICCO1.490e-2536.31Uncharacterized protein (Fragment) n=1 Tax=Micruru... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig1112contigC-tenellus_contig1112:2..3813 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FP48
Preferred nameFANCM
PFAMsDEAD,ERCC4,FANCM-MHF_bd,Helicase_C,ResIII,zf-HC5HC2H_2
Model size3813
Max annot lvl2759|Eukaryota
KEGG koko:K10896
KEGG Pathwayko03460,map03460
KEGG ModuleM00413
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000018,GO:0000019,GO:0000280,GO:0000712,GO:0000724,GO:0000725,GO:0003674,GO:0003678,GO:0003682,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007059,GO:0007127,GO:0007131,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009892,GO:0009987,GO:0010605,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0022402,GO:0022414,GO:0031297,GO:0031323,GO:0031324,GO:0031974,GO:0031981,GO:0032392,GO:0032508,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0035825,GO:0036297,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043240,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045003,GO:0045005,GO:0045132,GO:0045910,GO:0045934,GO:0045950,GO:0046483,GO:0048285,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051276,GO:0051304,GO:0051307,GO:0051321,GO:0051716,GO:0060255,GO:0061982,GO:0065007,GO:0070013,GO:0070035,GO:0071103,GO:0071704,GO:0071821,GO:0071840,GO:0080090,GO:0090304,GO:0098813,GO:0140013,GO:0140097,GO:1901360,GO:1901576,GO:1903046
Exons1
Evalue1.81e-42
EggNOG OGsCOG1111@1|root,COG5141@1|root,KOG0354@2759|Eukaryota,KOG0955@2759|Eukaryota
Descriptionchromatin organization
Cds size3810
COG categoryP
BRITEko00000,ko00001,ko00002,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789164.159961-CDS-C-tenellus_contig1112:3..38131680789164.159961-CDS-C-tenellus_contig1112:3..3813Choristocarpus tenellus KU2346CDSC-tenellus_contig1112 4..3813 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig1112.1.1prot_C-tenellus_contig1112.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig1112 4..3813 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig1112.1.1

>prot_C-tenellus_contig1112.1.1 ID=prot_C-tenellus_contig1112.1.1|Name=mRNA_C-tenellus_contig1112.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=1270bp
KCGLARGKSKYKDSSGASGRGRNMAVGIGYENKDKPGDEKDELFWSAQKR
KGVKYDRKLVSCPDDRGALMTGKPKSSRRKGVETAKSGTGGVSGRVKVKG
GAKVQNKADSVAPKACQEDVEGGNTTGGDPHSASREICDGVGKLQENPER
EWADKGGVGIGVDECRRNRSVGSCEEVPEPSDDVQNTQINSGGQTQNETQ
TQTQIGSHPCGTETVGEKCIHSAADLQAGSSDAAQVGSSNTSDCGSSGSQ
GRWQCGCGCIVKAHRKACGMCGAFPSRESLYQSSPTPPSSPISTQVPCPA
SGPVSAPGPTPREREKCENERAVVQEKISQSSSLLLSQSNVDQYGIRWEC
GCGCRMKADRLVCSLCGEPKPLLAGTPCSSPDSSGRVVGDSVSATIASQR
YGADNGDRESSDTIGKGDEQASAQHCNIASLCSRTNKKLAVEVEELSSDS
TIQKVVSQGGNGVRCRSRSGDEGERATHGDENVHRRRNAKPPGESGQVPT
ARCERVDVAVPEECLEMDPFEVDGVCKSLNGEKSSCNNHNYNRGMSSNSW
SEAISTGIDGKVLLGEEILNQKQSQSQSDDDDGLQEIFPSLRHFEADTTG
VGGVTKHTSEVMAWDGGCSGLLQGLRTGTNEARSSNETAVIPQPISSPLI
SVPPTLGAPWSPPCKKIKGIKEDSSWASNLSSLALPDHEPTPNTALSGEL
WKRESHNTTMISGCKRLLKVVSTSDQQEGSSSSLLCDPSTVDSPLSSNTG
PNSVVSIPRHCSEGKISGMKGMDESNPALFASVSVATSAVATCNAPKLAG
GTDLVSRQGPKKGMFVDTQGAPEGDCHSTGTAPHDDKRGQRFTSGSFPPP
HGSGPKPDEMSSDVKCKDNDCAALGQSCSDDDRYGTVGGVGGSAAKHLLK
YPLLCPSYHHVCNSNIKSKEVQIEGEEAEIDSLLYHDAEMETATCTDASS
GVGRPEEACSEGSCEFRSCRESAALVAREDAKEGNGCGEALDGGQDGGRK
NNRVLSQQLEEEDKECSVCSNPLSCDGDPIILCDGLGCRMAVHASCYGVD
NIPKEDWLCEPCVHALSAHGGDGIGSRSSSDPKLALNLLGLRPKCALCQH
RGGALKQSECGQWAHVVCVLWTPELLTRGASVRPITLSTLDADRANLMCS
ICRGIGDAVVQCAHPPCLKAVHPFCAQRASLLLEEEGVGGGFELRCRMHS
EVRRQELEEAEATAAASSGVSLTDLEGKGCKGQPLVSSCQDSNNCNQGGA
APGGLRERSKPHHYHGVEVD
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mRNA from alignment at C-tenellus_contig1112:2..3813-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig1112.1.1 ID=mRNA_C-tenellus_contig1112.1.1|Name=mRNA_C-tenellus_contig1112.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3812bp|location=Sequence derived from alignment at C-tenellus_contig1112:2..3813- (Choristocarpus tenellus KU2346)
AAATGTGGACTGGCAAGGGGTAAGAGCAAGTACAAGGATAGTAGTGGCGC
CAGTGGGAGAGGCAGGAATATGGCAGTTGGCATAGGCTATGAGAATAAGG
ACAAACCTGGTGACGAAAAAGATGAGCTATTTTGGTCGGCTCAGAAGCGA
AAGGGGGTGAAGTATGACAGAAAATTAGTTTCATGCCCAGATGATAGGGG
TGCGTTGATGACAGGGAAGCCTAAATCGAGCAGGAGGAAGGGGGTGGAAA
CTGCTAAATCTGGGACTGGGGGTGTCTCAGGTAGGGTCAAGGTCAAGGGT
GGGGCTAAGGTTCAGAACAAGGCAGACTCTGTTGCTCCCAAAGCTTGCCA
GGAAGATGTAGAGGGAGGCAACACTACTGGAGGAGATCCTCATTCTGCTA
GCAGAGAAATATGCGACGGGGTTGGGAAGTTACAAGAAAACCCTGAGAGG
GAATGGGCTGATAAAGGGGGAGTGGGAATCGGGGTGGATGAGTGTAGGAG
GAACCGAAGTGTTGGTAGTTGTGAGGAAGTGCCAGAGCCTAGTGATGATG
TACAAAATACACAGATCAACTCAGGTGGTCAAACACAGAATGAGACCCAG
ACCCAGACTCAGATTGGGTCACATCCTTGTGGTACAGAAACTGTTGGTGA
GAAGTGCATACACTCTGCTGCTGACCTGCAGGCTGGGTCTTCAGATGCTG
CCCAGGTTGGGAGCAGCAACACCAGTGACTGTGGCAGCTCTGGCTCACAG
GGAAGGTGGCAGTGTGGCTGCGGCTGCATTGTCAAGGCACATCGTAAAGC
ATGTGGGATGTGCGGGGCTTTCCCATCTAGAGAATCATTGTACCAGTCCA
GCCCCACCCCACCCTCCAGCCCTATCTCGACTCAGGTCCCTTGCCCTGCC
TCTGGCCCTGTTTCTGCACCTGGTCCAACCCCCCGAGAAAGGGAGAAATG
TGAGAATGAGAGGGCTGTAGTGCAGGAGAAAATAAGTCAATCATCAAGCC
TGCTGTTGTCACAGAGTAATGTTGACCAGTATGGAATCCGATGGGAGTGT
GGCTGTGGGTGCCGGATGAAGGCTGACCGACTTGTTTGCTCTTTGTGTGG
TGAGCCTAAACCATTATTGGCAGGGACCCCTTGTTCCTCTCCTGACAGTA
GTGGCAGGGTTGTAGGTGATAGTGTCAGTGCCACCATTGCATCACAAAGA
TATGGTGCTGATAATGGTGATAGGGAGAGCAGTGACACAATAGGGAAAGG
TGATGAGCAGGCAAGTGCTCAACACTGTAACATAGCCAGCTTATGTTCAA
GGACAAACAAGAAGTTAGCTGTTGAGGTTGAGGAGTTATCCTCAGACTCG
ACAATCCAGAAGGTTGTAAGTCAAGGTGGAAATGGGGTTAGGTGTAGAAG
CAGGAGTGGTGATGAAGGAGAGAGGGCAACCCATGGGGATGAGAATGTGC
ATCGAAGACGGAATGCAAAGCCTCCAGGTGAAAGCGGTCAGGTCCCAACT
GCTAGGTGTGAGAGGGTAGATGTGGCAGTTCCTGAGGAGTGCTTGGAAAT
GGACCCCTTTGAGGTAGATGGGGTGTGCAAGAGTCTAAATGGGGAAAAAT
CTTCATGCAACAATCACAACTATAACAGAGGCATGAGCAGCAATTCTTGG
AGTGAGGCAATAAGCACAGGTATTGATGGTAAAGTTCTTCTTGGAGAGGA
GATTTTAAATCAAAAACAGAGCCAAAGTCAGAGTGACGATGATGATGGCT
TGCAAGAGATTTTCCCTTCCCTCAGACACTTTGAGGCCGACACAACTGGT
GTAGGAGGTGTCACAAAGCACACAAGTGAAGTCATGGCATGGGATGGAGG
CTGCAGTGGTCTGTTGCAAGGTCTTCGGACTGGCACCAATGAGGCAAGAA
GCAGCAATGAGACTGCAGTAATTCCACAACCAATTTCCTCCCCCCTCATA
TCAGTACCACCTACTCTTGGAGCACCTTGGTCACCTCCGTGTAAGAAAAT
CAAGGGTATCAAAGAGGATTCTTCTTGGGCAAGCAATCTGTCCTCATTGG
CACTTCCTGATCATGAACCAACTCCAAACACTGCTCTGTCTGGTGAACTT
TGGAAAAGGGAGTCTCACAACACAACCATGATCTCTGGATGTAAACGCTT
GCTAAAGGTGGTGAGTACTTCTGATCAGCAAGAGGGGTCATCATCATCCC
TTTTGTGTGATCCCTCTACAGTGGATAGTCCGTTGAGCTCTAACACAGGG
CCCAACAGTGTGGTATCTATTCCTCGCCATTGCAGTGAGGGAAAAATAAG
TGGGATGAAGGGTATGGACGAATCCAATCCTGCGTTGTTTGCCTCTGTTT
CTGTTGCCACCAGTGCCGTTGCTACTTGCAATGCACCCAAATTGGCAGGG
GGGACAGACCTAGTCAGTCGTCAAGGGCCAAAGAAGGGCATGTTTGTTGA
TACTCAAGGTGCCCCAGAAGGTGACTGTCATAGTACTGGGACTGCACCTC
ATGATGATAAAAGGGGACAACGCTTTACCAGTGGATCATTTCCACCCCCA
CATGGAAGCGGACCAAAACCTGATGAGATGTCTTCTGATGTTAAGTGCAA
GGACAATGATTGTGCAGCTCTTGGGCAGTCATGTAGTGATGATGATAGGT
ATGGAACGGTAGGAGGGGTGGGGGGAAGCGCAGCAAAACACTTGCTGAAA
TATCCACTCCTTTGCCCTAGCTATCACCATGTGTGTAATAGTAACATAAA
GAGCAAGGAGGTGCAGATAGAGGGAGAAGAGGCTGAGATCGACAGCCTAT
TGTACCATGATGCAGAGATGGAGACAGCTACTTGCACTGATGCTTCTTCT
GGGGTAGGAAGACCCGAGGAGGCGTGCAGTGAAGGCAGTTGTGAATTTCG
TAGCTGTAGGGAGTCAGCAGCACTTGTGGCCAGGGAGGATGCTAAAGAAG
GCAATGGATGTGGTGAAGCACTGGATGGAGGACAGGACGGAGGAAGGAAA
AACAATCGTGTACTCTCCCAGCAGTTAGAGGAGGAAGATAAAGAGTGCAG
TGTGTGCAGCAACCCTTTGTCATGTGATGGTGACCCCATCATTCTTTGTG
ATGGATTGGGGTGCAGAATGGCAGTTCACGCCAGCTGCTATGGGGTGGAT
AACATCCCAAAGGAAGACTGGTTGTGCGAACCATGTGTACATGCCCTCAG
TGCCCATGGAGGTGATGGTATTGGCAGCAGAAGCAGTAGTGACCCCAAAC
TTGCCCTTAATCTGTTGGGTCTTAGACCCAAGTGTGCCCTGTGCCAGCAC
CGAGGGGGTGCGCTCAAGCAGTCTGAGTGTGGGCAGTGGGCACATGTTGT
ATGTGTGTTATGGACACCGGAGCTACTTACACGTGGAGCGTCTGTCCGTC
CAATAACACTGTCAACACTAGATGCTGACCGGGCCAACCTGATGTGCTCC
ATTTGCCGTGGTATTGGGGACGCTGTAGTGCAATGTGCTCATCCACCTTG
CTTGAAGGCCGTACACCCCTTCTGCGCACAGAGGGCATCTCTCTTGCTGG
AGGAGGAAGGGGTAGGAGGTGGCTTTGAGCTCAGGTGCCGAATGCACTCC
GAAGTGAGGCGACAAGAGTTAGAAGAGGCTGAGGCAACTGCTGCAGCATC
ATCAGGGGTGTCATTGACCGACTTGGAGGGAAAAGGTTGTAAAGGTCAAC
CACTTGTGTCATCATGCCAGGACTCAAACAACTGCAACCAAGGTGGGGCA
GCACCTGGAGGGTTGAGGGAAAGGAGCAAGCCCCATCACTACCATGGGGT
GGAGGTGGATGA
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Coding sequence (CDS) from alignment at C-tenellus_contig1112:2..3813-

>mRNA_C-tenellus_contig1112.1.1 ID=mRNA_C-tenellus_contig1112.1.1|Name=mRNA_C-tenellus_contig1112.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=3810bp|location=Sequence derived from alignment at C-tenellus_contig1112:2..3813- (Choristocarpus tenellus KU2346)
AAATGTGGACTGGCAAGGGGTAAGAGCAAGTACAAGGATAGTAGTGGCGC
CAGTGGGAGAGGCAGGAATATGGCAGTTGGCATAGGCTATGAGAATAAGG
ACAAACCTGGTGACGAAAAAGATGAGCTATTTTGGTCGGCTCAGAAGCGA
AAGGGGGTGAAGTATGACAGAAAATTAGTTTCATGCCCAGATGATAGGGG
TGCGTTGATGACAGGGAAGCCTAAATCGAGCAGGAGGAAGGGGGTGGAAA
CTGCTAAATCTGGGACTGGGGGTGTCTCAGGTAGGGTCAAGGTCAAGGGT
GGGGCTAAGGTTCAGAACAAGGCAGACTCTGTTGCTCCCAAAGCTTGCCA
GGAAGATGTAGAGGGAGGCAACACTACTGGAGGAGATCCTCATTCTGCTA
GCAGAGAAATATGCGACGGGGTTGGGAAGTTACAAGAAAACCCTGAGAGG
GAATGGGCTGATAAAGGGGGAGTGGGAATCGGGGTGGATGAGTGTAGGAG
GAACCGAAGTGTTGGTAGTTGTGAGGAAGTGCCAGAGCCTAGTGATGATG
TACAAAATACACAGATCAACTCAGGTGGTCAAACACAGAATGAGACCCAG
ACCCAGACTCAGATTGGGTCACATCCTTGTGGTACAGAAACTGTTGGTGA
GAAGTGCATACACTCTGCTGCTGACCTGCAGGCTGGGTCTTCAGATGCTG
CCCAGGTTGGGAGCAGCAACACCAGTGACTGTGGCAGCTCTGGCTCACAG
GGAAGGTGGCAGTGTGGCTGCGGCTGCATTGTCAAGGCACATCGTAAAGC
ATGTGGGATGTGCGGGGCTTTCCCATCTAGAGAATCATTGTACCAGTCCA
GCCCCACCCCACCCTCCAGCCCTATCTCGACTCAGGTCCCTTGCCCTGCC
TCTGGCCCTGTTTCTGCACCTGGTCCAACCCCCCGAGAAAGGGAGAAATG
TGAGAATGAGAGGGCTGTAGTGCAGGAGAAAATAAGTCAATCATCAAGCC
TGCTGTTGTCACAGAGTAATGTTGACCAGTATGGAATCCGATGGGAGTGT
GGCTGTGGGTGCCGGATGAAGGCTGACCGACTTGTTTGCTCTTTGTGTGG
TGAGCCTAAACCATTATTGGCAGGGACCCCTTGTTCCTCTCCTGACAGTA
GTGGCAGGGTTGTAGGTGATAGTGTCAGTGCCACCATTGCATCACAAAGA
TATGGTGCTGATAATGGTGATAGGGAGAGCAGTGACACAATAGGGAAAGG
TGATGAGCAGGCAAGTGCTCAACACTGTAACATAGCCAGCTTATGTTCAA
GGACAAACAAGAAGTTAGCTGTTGAGGTTGAGGAGTTATCCTCAGACTCG
ACAATCCAGAAGGTTGTAAGTCAAGGTGGAAATGGGGTTAGGTGTAGAAG
CAGGAGTGGTGATGAAGGAGAGAGGGCAACCCATGGGGATGAGAATGTGC
ATCGAAGACGGAATGCAAAGCCTCCAGGTGAAAGCGGTCAGGTCCCAACT
GCTAGGTGTGAGAGGGTAGATGTGGCAGTTCCTGAGGAGTGCTTGGAAAT
GGACCCCTTTGAGGTAGATGGGGTGTGCAAGAGTCTAAATGGGGAAAAAT
CTTCATGCAACAATCACAACTATAACAGAGGCATGAGCAGCAATTCTTGG
AGTGAGGCAATAAGCACAGGTATTGATGGTAAAGTTCTTCTTGGAGAGGA
GATTTTAAATCAAAAACAGAGCCAAAGTCAGAGTGACGATGATGATGGCT
TGCAAGAGATTTTCCCTTCCCTCAGACACTTTGAGGCCGACACAACTGGT
GTAGGAGGTGTCACAAAGCACACAAGTGAAGTCATGGCATGGGATGGAGG
CTGCAGTGGTCTGTTGCAAGGTCTTCGGACTGGCACCAATGAGGCAAGAA
GCAGCAATGAGACTGCAGTAATTCCACAACCAATTTCCTCCCCCCTCATA
TCAGTACCACCTACTCTTGGAGCACCTTGGTCACCTCCGTGTAAGAAAAT
CAAGGGTATCAAAGAGGATTCTTCTTGGGCAAGCAATCTGTCCTCATTGG
CACTTCCTGATCATGAACCAACTCCAAACACTGCTCTGTCTGGTGAACTT
TGGAAAAGGGAGTCTCACAACACAACCATGATCTCTGGATGTAAACGCTT
GCTAAAGGTGGTGAGTACTTCTGATCAGCAAGAGGGGTCATCATCATCCC
TTTTGTGTGATCCCTCTACAGTGGATAGTCCGTTGAGCTCTAACACAGGG
CCCAACAGTGTGGTATCTATTCCTCGCCATTGCAGTGAGGGAAAAATAAG
TGGGATGAAGGGTATGGACGAATCCAATCCTGCGTTGTTTGCCTCTGTTT
CTGTTGCCACCAGTGCCGTTGCTACTTGCAATGCACCCAAATTGGCAGGG
GGGACAGACCTAGTCAGTCGTCAAGGGCCAAAGAAGGGCATGTTTGTTGA
TACTCAAGGTGCCCCAGAAGGTGACTGTCATAGTACTGGGACTGCACCTC
ATGATGATAAAAGGGGACAACGCTTTACCAGTGGATCATTTCCACCCCCA
CATGGAAGCGGACCAAAACCTGATGAGATGTCTTCTGATGTTAAGTGCAA
GGACAATGATTGTGCAGCTCTTGGGCAGTCATGTAGTGATGATGATAGGT
ATGGAACGGTAGGAGGGGTGGGGGGAAGCGCAGCAAAACACTTGCTGAAA
TATCCACTCCTTTGCCCTAGCTATCACCATGTGTGTAATAGTAACATAAA
GAGCAAGGAGGTGCAGATAGAGGGAGAAGAGGCTGAGATCGACAGCCTAT
TGTACCATGATGCAGAGATGGAGACAGCTACTTGCACTGATGCTTCTTCT
GGGGTAGGAAGACCCGAGGAGGCGTGCAGTGAAGGCAGTTGTGAATTTCG
TAGCTGTAGGGAGTCAGCAGCACTTGTGGCCAGGGAGGATGCTAAAGAAG
GCAATGGATGTGGTGAAGCACTGGATGGAGGACAGGACGGAGGAAGGAAA
AACAATCGTGTACTCTCCCAGCAGTTAGAGGAGGAAGATAAAGAGTGCAG
TGTGTGCAGCAACCCTTTGTCATGTGATGGTGACCCCATCATTCTTTGTG
ATGGATTGGGGTGCAGAATGGCAGTTCACGCCAGCTGCTATGGGGTGGAT
AACATCCCAAAGGAAGACTGGTTGTGCGAACCATGTGTACATGCCCTCAG
TGCCCATGGAGGTGATGGTATTGGCAGCAGAAGCAGTAGTGACCCCAAAC
TTGCCCTTAATCTGTTGGGTCTTAGACCCAAGTGTGCCCTGTGCCAGCAC
CGAGGGGGTGCGCTCAAGCAGTCTGAGTGTGGGCAGTGGGCACATGTTGT
ATGTGTGTTATGGACACCGGAGCTACTTACACGTGGAGCGTCTGTCCGTC
CAATAACACTGTCAACACTAGATGCTGACCGGGCCAACCTGATGTGCTCC
ATTTGCCGTGGTATTGGGGACGCTGTAGTGCAATGTGCTCATCCACCTTG
CTTGAAGGCCGTACACCCCTTCTGCGCACAGAGGGCATCTCTCTTGCTGG
AGGAGGAAGGGGTAGGAGGTGGCTTTGAGCTCAGGTGCCGAATGCACTCC
GAAGTGAGGCGACAAGAGTTAGAAGAGGCTGAGGCAACTGCTGCAGCATC
ATCAGGGGTGTCATTGACCGACTTGGAGGGAAAAGGTTGTAAAGGTCAAC
CACTTGTGTCATCATGCCAGGACTCAAACAACTGCAACCAAGGTGGGGCA
GCACCTGGAGGGTTGAGGGAAAGGAGCAAGCCCCATCACTACCATGGGGT
GGAGGTGGAT
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