mRNA_C-tenellus_contig11114.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig11114.1.1 vs. uniprot
Match: D7FQ34_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ34_ECTSI) HSP 1 Score: 329 bits (844), Expect = 2.240e-103 Identity = 162/285 (56.84%), Postives = 208/285 (72.98%), Query Frame = 1 Query: 1 QARNRASWKTVKGFRWPFPKSPHDYIVHPKKLSESRVEILREPWVENELRGGRIQSQADDSDNNPIPG---REDFYSIPSNGKMIFGGLEPPEYDRDCDTSLIGNRSRLPRGRMKSCVNPGFFQSVHLGGDGLAKEKADTKLKEEEIWKSKVVVDNTDFLVGSFSVRDRPLQVDRAKEILQSPIKKTAFRMVRNARLPSGRRALLRPAPVSAFASEPFVDHKDFTVDLRGDDPELFVGTDPETGNRVDFETHLHRDRMKKKSHIICSRRKHPPIYEHEKLGPRWE 846 +A +RA+WKT +GF WP P++ + I HP K SESR++ LREPW+ENEL GG + A D P R +F ++PSNGK +FGGL+P +Y+R DT+LIG+RSRLPRGR + +P FF+SVHL G+GLA+EK + K + EE+W+SKVVVD+TDF VG+ +VRD PLQ DRAK+IL PI KTAF++VRNARLPSG+ A LRPAPVSAF+ EPF + +DFTV +RG+ E + DP TG++ DF LH DRMK KSH C+R KHPP+ E GPRWE Sbjct: 568 EAASRAAWKTNRGFVWPCPRTRQELITHPSKPSESRIDTLREPWIENELNGGMKEQMAGARDAGGPPELAWRREFDTVPSNGKAVFGGLKPSKYERPLDTNLIGSRSRLPRGRHQLDKDPEFFRSVHLVGEGLAREKEEEKRRTEELWRSKVVVDDTDFRVGNLNVRDTPLQTDRAKDILHPPINKTAFKIVRNARLPSGKSAPLRPAPVSAFSLEPFAEPEDFTVSIRGNHQERWAAADPVTGDKKDFFLRLHGDRMKVKSHKACARLKHPPLSPSEMKGPRWE 852
BLAST of mRNA_C-tenellus_contig11114.1.1 vs. uniprot
Match: A0A7S1U4M0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U4M0_9STRA) HSP 1 Score: 261 bits (667), Expect = 3.970e-78 Identity = 126/274 (45.99%), Postives = 183/274 (66.79%), Query Frame = 1 Query: 22 WKTVKGFRWPFPKSPHDYIVHPKKLSESRVEILREPWVENELRGGRIQSQADDSDNNPIPGREDFYSIPSNGKMIFGGLEPPEYDRDCDTSLIGNRSRLPRGRMKSCVNPGFFQSVHLGGDGLAKEKADTKLKEEEIWKSKVVVDNTDFLVGSFSVRDRPLQVDRAKEILQSPIKKTAFRMVRNARLPSGRRALLRPAPVSAFASEPFVDHKDFTVDLRGDDPELFVGTDPETGNRVDFETHLHRDRMKKKSHIICSRRKHPPIYEHEKLGPRW 843 WKT +GF +P P+ P +Y +HP + S +R+++L+EPWVENEL + + ++ P GR F + P IFGG P+Y+RD ++ +G+R+RLPRGRM +P FF SVHL GD LAKE + + +EE+W+SK+ VD+ F VG+F++RDRP+Q +R +IL +K A R+VRNA+LPSG++ R AP S F + + D +DFT+DLR DDPE F GTDP+TG + F T +HRD MK KS I S+R+ P+ + +++GP+W Sbjct: 511 WKTERGFVYPAPREPREYNIHPHRPSNARIDVLKEPWVENELHPRPVARASTPPESAP-KGRPQFNTTPC-PPQIFGGYHVPKYERDYESKHLGDRNRLPRGRMALDDDPKFFSSVHLVGDKLAKEMEEAEKAQEELWRSKIAVDDLHFHVGNFNIRDRPMQTERRNDILHGKVKNKALRIVRNAKLPSGKKIPFRQAPYSIFTRDQYKDPRDFTLDLRPDDPEHFYGTDPKTGQTLPFVTKIHRDVMKPKSQTIQSKRRIQPLTQSDRVGPKW 782
BLAST of mRNA_C-tenellus_contig11114.1.1 vs. uniprot
Match: A0A7S3YKX3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YKX3_HETAK) HSP 1 Score: 221 bits (564), Expect = 1.520e-68 Identity = 117/244 (47.95%), Postives = 155/244 (63.52%), Query Frame = 1 Query: 115 ILREPWVENEL-RGGRIQSQADDSDNNPIPGREDFYSIPSNGKMIFGGLEPPEYDRDCDTSLIGNRSRLPRGRMKSCVNPGFFQSVHLGGDGLAKEKADTKLKEEEIWKSKVVVDNTDFLVGSFSVRDRPLQVDRAKEILQSPIKKTAFRMVRNARLPSGRRALLRPAPVSAFASEPFVDHKDFTVDLRGDDPELFVGTDPETGNRVDFETHLHRDRMKKKSHIICSRRKHPPIYEHEKLGPRW 843 IL+ PWVENEL RG + DF+ + +FGGL+ P + R+ D+ L+GNRSRLPRGR+ + +P FF+SVHLGGDGL K+ + K EE +W+SKVVVD+ DF VG V+DRP QVDR +EIL P K + R+VRNARLPSG+R ++ P+S E + D KDFT DLR D+PE ++ TD TG ++ F H+HR+ K+KS + S RKHP + E GPRW Sbjct: 1 ILKGPWVENELTRGPPAREXXXXXXXXXXXAAPDFH-VDVRLPALFGGLQKPHFGREYDSRLLGNRSRLPRGRLSAGRDPAFFESVHLGGDGLEKQMEEAKRAEEALWRSKVVVDDVDFRVGRLKVKDRPAQVDRQREILDGPALKKSLRIVRNARLPSGKRVPMKAPPISINNDE-YEDPKDFTADLRADNPEFYIATDA-TGKKLPFTRHIHRNTFKEKSTVSTSSRKHPQLALAEMSGPRW 241
BLAST of mRNA_C-tenellus_contig11114.1.1 vs. uniprot
Match: A0A836CB85_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB85_9STRA) HSP 1 Score: 198 bits (503), Expect = 4.190e-54 Identity = 121/295 (41.02%), Postives = 161/295 (54.58%), Query Frame = 1 Query: 1 QARNRASWKTVKGFRWPFPKSPHDYIVHPKKLSESRVEILREPWVENELRGGR-------IQSQADDSDNNPIPGREDFYSIPSNGKMIFGGLEPPEYDRDCDT-SLIGNRSRLPRGRMKSCV--NPGFFQSVHLGGDGLA--KEKADTKLKEEEIWKSKVVVDNTDFLVGSFSVRDRPLQVDRAKEILQSPIKKTAFRMVRNARLPSGRRALLRPAPVSAFASEPFVDH-KDFTVDLRGDDPELFVGTDPETGNRVDFETHLHRDRMKKKSH-IICSRRKHPPIYEHEKLGPRW 843 + R+RA+W T GF +P P+ P +Y HPKK S SR+++LREPWVENEL GGR R +F +P+NG M+ GGL P Y R D +L R RLPRG + +PGFF SVH+ G + +E A + +E W S+VVVD+ F VG F+VRDR Q++R +IL+ P K A R VRNA LPSGR P+SA + EP+ D V++ + G R +F TH+HRDR+K +S I+ RRK P+ EK GP W Sbjct: 624 EERSRAAWLTPGGFVYPAPRPPCEYNAHPKKPSASRIDMLREPWVENELHGGRGAXXXXXXXXXXXXXXXXXXDDRPEFDCVPTNGAMLMGGLAAPAYARPFDGGALAERRGRLPRGAQVAGAQRDPGFFTSVHIAGANVEAQREAAAAAQRAKEAWLSRVVVDDLAFHVGGFNVRDRVPQIERTADILKGPPLKAALRRVRNAHLPSGRAVPFPNPPISALSLEPYADPLARRKVEVEXXXXXXXXXXXXDEGWRPEFRTHIHRDRLKPRSQTIVAGRRKIVPVALAEKRGPIW 918
BLAST of mRNA_C-tenellus_contig11114.1.1 vs. uniprot
Match: A0A8J2S3F3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S3F3_9STRA) HSP 1 Score: 172 bits (437), Expect = 4.990e-45 Identity = 117/299 (39.13%), Postives = 163/299 (54.52%), Query Frame = 1 Query: 10 NRASWKTVKGFRWPFPKSPHDYIVHPKKLSESRVEILREPWVENELRGGRIQSQADDSDNNPIPGREDFYSIPSNGKMIFGGLEPPEYDRDCDTSLIGNRSRLPRGRMK--------------SCVNPGF-----FQSVHLGGDGLAKEKADTKLKEEEIWKSKVVVDNTDFLVGSFSVRDRPLQVDRAKEILQSPIKKTAFRMVRNARLPSGRRALLRPAPVSAFASEPFVDHKDFTVDLRG-DDPELFVGTDPETGNRVDFETHLHRDRMKKKSHIICSRRKHPPIYEHEKLG-PRW 843 ++ W T +GF +P P+ P + HPK +S SR E LRE WVE EL + + D D G ++F SIP+ + FGG + P+Y+R+ ++ +GN +RLPRGRM + V P + ++SVHL D A +KA K K E W S+V+VD+ F VG F +DRP DR +IL+ P KK A ++VRNA+LPSGRR + PAP S FA+ F + + F LR PE F G +DF+T +HRD M++ S I + P+ HE G PRW Sbjct: 907 SKQKWMTSRGFVYPAPREPGTWNRHPKNVSASRAEELREEWVEGELFPDP-EGREDHPDK--WTGGKNFDSIPAFARE-FGGYQYPKYEREYNSHELGNWNRLPRGRMVDGHVPPDVSIYRRGTDVPPAYDSRTYYKSVHLEPDKAANDKA-RKDKLHEEWASRVIVDDPVFKVGGFLQKDRPDACDRTSDILKDPPKKYALKLVRNAKLPSGRRVKMTPAPFSIFATGEFKEEERFDRTLRNYGGPEDFPKD--AQGEPIDFQTRIHRDIMRRASEKILCGKTITPVEAHEVYGDPRW 1198
BLAST of mRNA_C-tenellus_contig11114.1.1 vs. uniprot
Match: A0A7S1CKA2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CKA2_9STRA) HSP 1 Score: 132 bits (333), Expect = 3.390e-34 Identity = 73/167 (43.71%), Postives = 106/167 (63.47%), Query Frame = 1 Query: 346 NPGFFQSVHLGGDGLAKEKADTKLKEEEIWKSKVVVDNTDFLVGSFSVRDRPLQVDRAKEILQSPIKKTAFRMVRNARLPSGRR-ALLRPAPVSAFASEPFVDHKDFTVDLRGDDPELFVGTDPETGNRVDFETHLHRDRMKKKSHIICSRRKHPPIYEHEKLGPRW 843 NP FF+SVHL GDGLAKE A+ KL++E+ W+ K+VVD F R+ Q+ + + +L+ P+KK A R+V +A+LPSG++ A AP S + EP+ D KDFT L+ +DP FVGTD +G + DF ++ D ++ K+ + +R PP+ E EK GPRW Sbjct: 51 NPDFFKSVHLTGDGLAKEAAEEKLRQEKEWRDKMVVDTERFQPHYSGGRES--QIAKLEGLLKGPVKKKALRIVHSAKLPSGKKTAPPVAAPPSMLSGEPYEDPKDFTTTLKPNDPTTFVGTDA-SGRQTDFSKYVRNDMLRPKAQNLLWKRGIPPLTEEEKTGPRW 214
BLAST of mRNA_C-tenellus_contig11114.1.1 vs. uniprot
Match: W2Q5K6_PHYPN (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2Q5K6_PHYPN) HSP 1 Score: 124 bits (311), Expect = 3.140e-28 Identity = 93/285 (32.63%), Postives = 136/285 (47.72%), Query Frame = 1 Query: 10 NRASWKTVKGFRWPFPKSPHDYIVHPKKLSESRVEILREPWVENELRGGRIQSQADDSDNNPIPGREDFYSIPSNGKMIFGGLEPPEYDRDCDTSLIGNRSRLPRGRMKSCVNPGFFQSVHLGGDGLAKEKADTKLKEEEIWKSKVVVDNTD--FLV-GSF--SVRDRPLQVDRAKEILQSPIKKTAFRMVRNARLPSGRRALLRPAPVSAFASEPFVD--HKDFTVDLRGDDPELFVGTDPETGNRVDFETHLHRDRMKKKSHIICSRRKHPPIYEHEKLGPRW 843 NR W T +GF +P P+ P +Y HP SE+R E LR+P+V+N + + + + P +F ++PS M+FGG T+ G VNP +F+SVHL G+GL E + KE++ W+ ++VVD FL GS RD+P Q+D+ +IL+ P R+V+NA LPSG+R L PV+ E +V F LR D FV TD +G DF + + +R++ P+ E EK G W Sbjct: 1445 NRKKWTTQRGFIYPAPRQPSEYKKHPNAPSEARCEDLRQPFVDNINHPKPVSRDSSEPGSRKCP---EFSTLPSKD-MVFGG-----------TNGDGT------------VNPDYFRSVHLCGEGLRLEMEEALKKEQDEWERRLVVDKKQLKFLAHGSICSQPRDKPSQLDKISDILRGPAHSKPIRIVKNATLPSGKRVPLEKTPVTIHNHEKYVGCVAATFASTLRPSDNNQFVATDALSGKPQDFLFPSTSNILTPPVKKFVTRKEIVPVRETEKRGLIW 1702
BLAST of mRNA_C-tenellus_contig11114.1.1 vs. uniprot
Match: A0A329SI59_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SI59_9STRA) HSP 1 Score: 119 bits (299), Expect = 1.140e-26 Identity = 93/289 (32.18%), Postives = 139/289 (48.10%), Query Frame = 1 Query: 10 NRASWKTVKGFRWPFPKSPHDYIVHPKKLSESRVEILREPWVENELRGGRIQSQADDSDNNPIPGREDFYSIPSNGKMIFGGLEPPEYDRDCDTSLIGNRSRLPRGRMKSCVNPGFFQSVHLGGDGLAKEKADTKLKEEEIWKSKVVVDNTD--FLV-GSF--SVRDRPLQVDRAKEILQSPIKKTAFRMVRNARLPSGRRALLRPAPVSAFASEPFVD--HKDFTVDLRGDDPELFVGTDPETGNRVDF----ETHLHRDRMKKKSHIICSRRKHPPIYEHEKLGPRW 843 NR W T +GF +P P+ P +Y HP SE+R E LR+P+V+N + + + + P +F ++PS MIFGG T+ G VNP +F+SVHL G+GL E + +E++ W ++VVD FL GS R++P Q+D+ +IL+ P R+V+NA LPSG+R L PV+ E +V F + LR + FV TD + DF T++ +KK +R++ P+ E EK G W Sbjct: 905 NRKKWTTQRGFVYPAPRQPSEYKKHPNAPSEARCEDLRQPFVDNINHPKPVSRDSSEPGSRKGP---EFSTLPSKD-MIFGG-----------TNGDGT------------VNPDYFRSVHLCGEGLRLEMEEALKQEQDEWDRRLVVDKKQLKFLAHGSICSQPREKPSQLDKISDILRGPAHSKPIRIVKNATLPSGKRVPLEKPPVTIHNQEEYVGCVAATFAITLRPSNSNQFVATDAMSNKPQDFLFPSTTNILTPPVKK----FITRKEIVPVQETEKRGLIW 1162
BLAST of mRNA_C-tenellus_contig11114.1.1 vs. uniprot
Match: G5AEJ4_PHYSP (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=G5AEJ4_PHYSP) HSP 1 Score: 119 bits (298), Expect = 1.490e-26 Identity = 93/288 (32.29%), Postives = 139/288 (48.26%), Query Frame = 1 Query: 10 NRASWKTVKGFRWPFPKSPHDYIVHPKKLSESRVEILREPWVENELRGGRIQSQADDSDNNPIPGREDFYSIPSNGKMIFGGLEPPEYDRDCDTSLIGNRSRLPRGRMKSCVNPGFFQSVHLGGDGLAKEKADTKLKEEEIWKSKVVVDNTD--FLV-GSFSV--RDRPLQVDRAKEILQSPIKKTAFRMVRNARLPSGRRALLRPAPVSAFASEPFVD--HKDFTVDLRGDDPELFVGTDPETGNRVDF---ETHLHRDRMKKKSHIICSRRKHPPIYEHEKLGPRW 843 +R W T +GF +P P+ P +Y H SE+R E LR+P+V+N + + + + P +F ++PS MIFGG G+ S VNP +F+SVHL G+GL E + KE+ W+ ++VVD FL G+ R++P Q+D+ +IL+ P + R+V+NA LPSG+R L APV+ E + F LR D FV TD +G DF T++ +KK +R++ P+ E EK G W Sbjct: 722 DRKKWTTQRGFIYPAPRQPAEYYKHANAPSEARCEDLRQPFVDNVNHPKPVSRDSGEPGSRKGP---EFSTLPSKD-MIFGGTN-------------GDGS----------VNPDYFRSVHLCGEGLRLEMEEALKKEQGEWERRLVVDKKQLKFLAHGNICSLPREKPSQLDKISDILKGPAQSKPIRIVKNATLPSGKRVPLEKAPVTIHNQEEYAGCVAATFASTLRPSDSNQFVATDATSGQPKDFFPSTTNILTPPVKK----FITRKEITPVRETEKRGLVW 978
BLAST of mRNA_C-tenellus_contig11114.1.1 vs. uniprot
Match: A0A6G0XFT8_9STRA (CBFD_NFYB_HMF domain-containing protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0XFT8_9STRA) HSP 1 Score: 115 bits (287), Expect = 4.470e-25 Identity = 93/288 (32.29%), Postives = 139/288 (48.26%), Query Frame = 1 Query: 10 NRASWKTVKGFRWPFPKSPHDYIVHPKKLSESRVEILREPWVENELRGGRIQSQADDSDNNPIPGREDFYSIPSNGKMIFGGLEPPEYDRDCDTSLIGNRSRLPRGRMKSCVNPGFFQSVHLGGDGLAKEKADTKLKEEEIWKSKVVVD--NTDFLVGSFSV---RDRPLQVDRAKEILQSPIKKTAFRMVRNARLPSGRRALLRPAPVSAFASEPFVDHKDFTVDLRGDDPELFVGTDPETGNRVDFE----THLHRDRMKKKSHIICSRRKHPPIYEHEKLGPRWE 846 ++A W T GF +P P+ P ++ H S +R E L PW+EN L + S+ D N + F S+PS M+FGG T+ G+ VNP +F+SVHL GDGLAKE + K KE + W K+VVD N F+ + R RP +D+ ++IL ++ R+VRNA+LPSG++ L PVS + + ++ R DP FV + G+ DF T + + K + ++ R+ P+ E EK G RW+ Sbjct: 848 SKAQWTTPGGFVYPAPRQPSEFYKHKDAPSAARCEDLHAPWIEN-LYHPQPLSRGDGG--NEDRHKVSFDSLPSKD-MVFGG-----------TNADGS------------VNPEYFKSVHLVGDGLAKEMEEAKAKEHKEWLEKIVVDHDNLRFIAHGDIMGQGRARPSALDKPQDILAGTVRSKPLRIVRNAKLPSGKQVPLHAMPVSIMNQDEYKGGAKQMIE-RDRDPSQFVARTNQ-GDPKDFFFPSITQILVPNVNKHTTLLKPRK---PLAESEKTGLRWK 1103 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11114.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig11114.1.1 >prot_C-tenellus_contig11114.1.1 ID=prot_C-tenellus_contig11114.1.1|Name=mRNA_C-tenellus_contig11114.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=282bp QARNRASWKTVKGFRWPFPKSPHDYIVHPKKLSESRVEILREPWVENELRback to top mRNA from alignment at C-tenellus_contig11114:2128..4414- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig11114.1.1 ID=mRNA_C-tenellus_contig11114.1.1|Name=mRNA_C-tenellus_contig11114.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2287bp|location=Sequence derived from alignment at C-tenellus_contig11114:2128..4414- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig11114:2128..4414- >mRNA_C-tenellus_contig11114.1.1 ID=mRNA_C-tenellus_contig11114.1.1|Name=mRNA_C-tenellus_contig11114.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=846bp|location=Sequence derived from alignment at C-tenellus_contig11114:2128..4414- (Choristocarpus tenellus KU2346)back to top |