mRNA_C-tenellus_contig11114.1.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig11114.1.1
Unique NamemRNA_C-tenellus_contig11114.1.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig11114.1.1 vs. uniprot
Match: D7FQ34_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ34_ECTSI)

HSP 1 Score: 329 bits (844), Expect = 2.240e-103
Identity = 162/285 (56.84%), Postives = 208/285 (72.98%), Query Frame = 1
Query:    1 QARNRASWKTVKGFRWPFPKSPHDYIVHPKKLSESRVEILREPWVENELRGGRIQSQADDSDNNPIPG---REDFYSIPSNGKMIFGGLEPPEYDRDCDTSLIGNRSRLPRGRMKSCVNPGFFQSVHLGGDGLAKEKADTKLKEEEIWKSKVVVDNTDFLVGSFSVRDRPLQVDRAKEILQSPIKKTAFRMVRNARLPSGRRALLRPAPVSAFASEPFVDHKDFTVDLRGDDPELFVGTDPETGNRVDFETHLHRDRMKKKSHIICSRRKHPPIYEHEKLGPRWE 846
            +A +RA+WKT +GF WP P++  + I HP K SESR++ LREPW+ENEL GG  +  A   D    P    R +F ++PSNGK +FGGL+P +Y+R  DT+LIG+RSRLPRGR +   +P FF+SVHL G+GLA+EK + K + EE+W+SKVVVD+TDF VG+ +VRD PLQ DRAK+IL  PI KTAF++VRNARLPSG+ A LRPAPVSAF+ EPF + +DFTV +RG+  E +   DP TG++ DF   LH DRMK KSH  C+R KHPP+   E  GPRWE
Sbjct:  568 EAASRAAWKTNRGFVWPCPRTRQELITHPSKPSESRIDTLREPWIENELNGGMKEQMAGARDAGGPPELAWRREFDTVPSNGKAVFGGLKPSKYERPLDTNLIGSRSRLPRGRHQLDKDPEFFRSVHLVGEGLAREKEEEKRRTEELWRSKVVVDDTDFRVGNLNVRDTPLQTDRAKDILHPPINKTAFKIVRNARLPSGKSAPLRPAPVSAFSLEPFAEPEDFTVSIRGNHQERWAAADPVTGDKKDFFLRLHGDRMKVKSHKACARLKHPPLSPSEMKGPRWE 852          
BLAST of mRNA_C-tenellus_contig11114.1.1 vs. uniprot
Match: A0A7S1U4M0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U4M0_9STRA)

HSP 1 Score: 261 bits (667), Expect = 3.970e-78
Identity = 126/274 (45.99%), Postives = 183/274 (66.79%), Query Frame = 1
Query:   22 WKTVKGFRWPFPKSPHDYIVHPKKLSESRVEILREPWVENELRGGRIQSQADDSDNNPIPGREDFYSIPSNGKMIFGGLEPPEYDRDCDTSLIGNRSRLPRGRMKSCVNPGFFQSVHLGGDGLAKEKADTKLKEEEIWKSKVVVDNTDFLVGSFSVRDRPLQVDRAKEILQSPIKKTAFRMVRNARLPSGRRALLRPAPVSAFASEPFVDHKDFTVDLRGDDPELFVGTDPETGNRVDFETHLHRDRMKKKSHIICSRRKHPPIYEHEKLGPRW 843
            WKT +GF +P P+ P +Y +HP + S +R+++L+EPWVENEL    +   +   ++ P  GR  F + P     IFGG   P+Y+RD ++  +G+R+RLPRGRM    +P FF SVHL GD LAKE  + +  +EE+W+SK+ VD+  F VG+F++RDRP+Q +R  +IL   +K  A R+VRNA+LPSG++   R AP S F  + + D +DFT+DLR DDPE F GTDP+TG  + F T +HRD MK KS  I S+R+  P+ + +++GP+W
Sbjct:  511 WKTERGFVYPAPREPREYNIHPHRPSNARIDVLKEPWVENELHPRPVARASTPPESAP-KGRPQFNTTPC-PPQIFGGYHVPKYERDYESKHLGDRNRLPRGRMALDDDPKFFSSVHLVGDKLAKEMEEAEKAQEELWRSKIAVDDLHFHVGNFNIRDRPMQTERRNDILHGKVKNKALRIVRNAKLPSGKKIPFRQAPYSIFTRDQYKDPRDFTLDLRPDDPEHFYGTDPKTGQTLPFVTKIHRDVMKPKSQTIQSKRRIQPLTQSDRVGPKW 782          
BLAST of mRNA_C-tenellus_contig11114.1.1 vs. uniprot
Match: A0A7S3YKX3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YKX3_HETAK)

HSP 1 Score: 221 bits (564), Expect = 1.520e-68
Identity = 117/244 (47.95%), Postives = 155/244 (63.52%), Query Frame = 1
Query:  115 ILREPWVENEL-RGGRIQSQADDSDNNPIPGREDFYSIPSNGKMIFGGLEPPEYDRDCDTSLIGNRSRLPRGRMKSCVNPGFFQSVHLGGDGLAKEKADTKLKEEEIWKSKVVVDNTDFLVGSFSVRDRPLQVDRAKEILQSPIKKTAFRMVRNARLPSGRRALLRPAPVSAFASEPFVDHKDFTVDLRGDDPELFVGTDPETGNRVDFETHLHRDRMKKKSHIICSRRKHPPIYEHEKLGPRW 843
            IL+ PWVENEL RG   +               DF+ +      +FGGL+ P + R+ D+ L+GNRSRLPRGR+ +  +P FF+SVHLGGDGL K+  + K  EE +W+SKVVVD+ DF VG   V+DRP QVDR +EIL  P  K + R+VRNARLPSG+R  ++  P+S    E + D KDFT DLR D+PE ++ TD  TG ++ F  H+HR+  K+KS +  S RKHP +   E  GPRW
Sbjct:    1 ILKGPWVENELTRGPPAREXXXXXXXXXXXAAPDFH-VDVRLPALFGGLQKPHFGREYDSRLLGNRSRLPRGRLSAGRDPAFFESVHLGGDGLEKQMEEAKRAEEALWRSKVVVDDVDFRVGRLKVKDRPAQVDRQREILDGPALKKSLRIVRNARLPSGKRVPMKAPPISINNDE-YEDPKDFTADLRADNPEFYIATDA-TGKKLPFTRHIHRNTFKEKSTVSTSSRKHPQLALAEMSGPRW 241          
BLAST of mRNA_C-tenellus_contig11114.1.1 vs. uniprot
Match: A0A836CB85_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB85_9STRA)

HSP 1 Score: 198 bits (503), Expect = 4.190e-54
Identity = 121/295 (41.02%), Postives = 161/295 (54.58%), Query Frame = 1
Query:    1 QARNRASWKTVKGFRWPFPKSPHDYIVHPKKLSESRVEILREPWVENELRGGR-------IQSQADDSDNNPIPGREDFYSIPSNGKMIFGGLEPPEYDRDCDT-SLIGNRSRLPRGRMKSCV--NPGFFQSVHLGGDGLA--KEKADTKLKEEEIWKSKVVVDNTDFLVGSFSVRDRPLQVDRAKEILQSPIKKTAFRMVRNARLPSGRRALLRPAPVSAFASEPFVDH-KDFTVDLRGDDPELFVGTDPETGNRVDFETHLHRDRMKKKSH-IICSRRKHPPIYEHEKLGPRW 843
            + R+RA+W T  GF +P P+ P +Y  HPKK S SR+++LREPWVENEL GGR                      R +F  +P+NG M+ GGL  P Y R  D  +L   R RLPRG   +    +PGFF SVH+ G  +   +E A    + +E W S+VVVD+  F VG F+VRDR  Q++R  +IL+ P  K A R VRNA LPSGR       P+SA + EP+ D      V++             + G R +F TH+HRDR+K +S  I+  RRK  P+   EK GP W
Sbjct:  624 EERSRAAWLTPGGFVYPAPRPPCEYNAHPKKPSASRIDMLREPWVENELHGGRGAXXXXXXXXXXXXXXXXXXDDRPEFDCVPTNGAMLMGGLAAPAYARPFDGGALAERRGRLPRGAQVAGAQRDPGFFTSVHIAGANVEAQREAAAAAQRAKEAWLSRVVVDDLAFHVGGFNVRDRVPQIERTADILKGPPLKAALRRVRNAHLPSGRAVPFPNPPISALSLEPYADPLARRKVEVEXXXXXXXXXXXXDEGWRPEFRTHIHRDRLKPRSQTIVAGRRKIVPVALAEKRGPIW 918          
BLAST of mRNA_C-tenellus_contig11114.1.1 vs. uniprot
Match: A0A8J2S3F3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S3F3_9STRA)

HSP 1 Score: 172 bits (437), Expect = 4.990e-45
Identity = 117/299 (39.13%), Postives = 163/299 (54.52%), Query Frame = 1
Query:   10 NRASWKTVKGFRWPFPKSPHDYIVHPKKLSESRVEILREPWVENELRGGRIQSQADDSDNNPIPGREDFYSIPSNGKMIFGGLEPPEYDRDCDTSLIGNRSRLPRGRMK--------------SCVNPGF-----FQSVHLGGDGLAKEKADTKLKEEEIWKSKVVVDNTDFLVGSFSVRDRPLQVDRAKEILQSPIKKTAFRMVRNARLPSGRRALLRPAPVSAFASEPFVDHKDFTVDLRG-DDPELFVGTDPETGNRVDFETHLHRDRMKKKSHIICSRRKHPPIYEHEKLG-PRW 843
            ++  W T +GF +P P+ P  +  HPK +S SR E LRE WVE EL     + + D  D     G ++F SIP+  +  FGG + P+Y+R+ ++  +GN +RLPRGRM               + V P +     ++SVHL  D  A +KA  K K  E W S+V+VD+  F VG F  +DRP   DR  +IL+ P KK A ++VRNA+LPSGRR  + PAP S FA+  F + + F   LR    PE F       G  +DF+T +HRD M++ S  I   +   P+  HE  G PRW
Sbjct:  907 SKQKWMTSRGFVYPAPREPGTWNRHPKNVSASRAEELREEWVEGELFPDP-EGREDHPDK--WTGGKNFDSIPAFARE-FGGYQYPKYEREYNSHELGNWNRLPRGRMVDGHVPPDVSIYRRGTDVPPAYDSRTYYKSVHLEPDKAANDKA-RKDKLHEEWASRVIVDDPVFKVGGFLQKDRPDACDRTSDILKDPPKKYALKLVRNAKLPSGRRVKMTPAPFSIFATGEFKEEERFDRTLRNYGGPEDFPKD--AQGEPIDFQTRIHRDIMRRASEKILCGKTITPVEAHEVYGDPRW 1198          
BLAST of mRNA_C-tenellus_contig11114.1.1 vs. uniprot
Match: A0A7S1CKA2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CKA2_9STRA)

HSP 1 Score: 132 bits (333), Expect = 3.390e-34
Identity = 73/167 (43.71%), Postives = 106/167 (63.47%), Query Frame = 1
Query:  346 NPGFFQSVHLGGDGLAKEKADTKLKEEEIWKSKVVVDNTDFLVGSFSVRDRPLQVDRAKEILQSPIKKTAFRMVRNARLPSGRR-ALLRPAPVSAFASEPFVDHKDFTVDLRGDDPELFVGTDPETGNRVDFETHLHRDRMKKKSHIICSRRKHPPIYEHEKLGPRW 843
            NP FF+SVHL GDGLAKE A+ KL++E+ W+ K+VVD   F       R+   Q+ + + +L+ P+KK A R+V +A+LPSG++ A    AP S  + EP+ D KDFT  L+ +DP  FVGTD  +G + DF  ++  D ++ K+  +  +R  PP+ E EK GPRW
Sbjct:   51 NPDFFKSVHLTGDGLAKEAAEEKLRQEKEWRDKMVVDTERFQPHYSGGRES--QIAKLEGLLKGPVKKKALRIVHSAKLPSGKKTAPPVAAPPSMLSGEPYEDPKDFTTTLKPNDPTTFVGTDA-SGRQTDFSKYVRNDMLRPKAQNLLWKRGIPPLTEEEKTGPRW 214          
BLAST of mRNA_C-tenellus_contig11114.1.1 vs. uniprot
Match: W2Q5K6_PHYPN (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2Q5K6_PHYPN)

HSP 1 Score: 124 bits (311), Expect = 3.140e-28
Identity = 93/285 (32.63%), Postives = 136/285 (47.72%), Query Frame = 1
Query:   10 NRASWKTVKGFRWPFPKSPHDYIVHPKKLSESRVEILREPWVENELRGGRIQSQADDSDNNPIPGREDFYSIPSNGKMIFGGLEPPEYDRDCDTSLIGNRSRLPRGRMKSCVNPGFFQSVHLGGDGLAKEKADTKLKEEEIWKSKVVVDNTD--FLV-GSF--SVRDRPLQVDRAKEILQSPIKKTAFRMVRNARLPSGRRALLRPAPVSAFASEPFVD--HKDFTVDLRGDDPELFVGTDPETGNRVDFETHLHRDRMKKKSHIICSRRKHPPIYEHEKLGPRW 843
            NR  W T +GF +P P+ P +Y  HP   SE+R E LR+P+V+N      +   + +  +   P   +F ++PS   M+FGG           T+  G             VNP +F+SVHL G+GL  E  +   KE++ W+ ++VVD     FL  GS     RD+P Q+D+  +IL+ P      R+V+NA LPSG+R  L   PV+    E +V      F   LR  D   FV TD  +G   DF      + +        +R++  P+ E EK G  W
Sbjct: 1445 NRKKWTTQRGFIYPAPRQPSEYKKHPNAPSEARCEDLRQPFVDNINHPKPVSRDSSEPGSRKCP---EFSTLPSKD-MVFGG-----------TNGDGT------------VNPDYFRSVHLCGEGLRLEMEEALKKEQDEWERRLVVDKKQLKFLAHGSICSQPRDKPSQLDKISDILRGPAHSKPIRIVKNATLPSGKRVPLEKTPVTIHNHEKYVGCVAATFASTLRPSDNNQFVATDALSGKPQDFLFPSTSNILTPPVKKFVTRKEIVPVRETEKRGLIW 1702          
BLAST of mRNA_C-tenellus_contig11114.1.1 vs. uniprot
Match: A0A329SI59_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SI59_9STRA)

HSP 1 Score: 119 bits (299), Expect = 1.140e-26
Identity = 93/289 (32.18%), Postives = 139/289 (48.10%), Query Frame = 1
Query:   10 NRASWKTVKGFRWPFPKSPHDYIVHPKKLSESRVEILREPWVENELRGGRIQSQADDSDNNPIPGREDFYSIPSNGKMIFGGLEPPEYDRDCDTSLIGNRSRLPRGRMKSCVNPGFFQSVHLGGDGLAKEKADTKLKEEEIWKSKVVVDNTD--FLV-GSF--SVRDRPLQVDRAKEILQSPIKKTAFRMVRNARLPSGRRALLRPAPVSAFASEPFVD--HKDFTVDLRGDDPELFVGTDPETGNRVDF----ETHLHRDRMKKKSHIICSRRKHPPIYEHEKLGPRW 843
            NR  W T +GF +P P+ P +Y  HP   SE+R E LR+P+V+N      +   + +  +   P   +F ++PS   MIFGG           T+  G             VNP +F+SVHL G+GL  E  +   +E++ W  ++VVD     FL  GS     R++P Q+D+  +IL+ P      R+V+NA LPSG+R  L   PV+    E +V      F + LR  +   FV TD  +    DF     T++    +KK      +R++  P+ E EK G  W
Sbjct:  905 NRKKWTTQRGFVYPAPRQPSEYKKHPNAPSEARCEDLRQPFVDNINHPKPVSRDSSEPGSRKGP---EFSTLPSKD-MIFGG-----------TNGDGT------------VNPDYFRSVHLCGEGLRLEMEEALKQEQDEWDRRLVVDKKQLKFLAHGSICSQPREKPSQLDKISDILRGPAHSKPIRIVKNATLPSGKRVPLEKPPVTIHNQEEYVGCVAATFAITLRPSNSNQFVATDAMSNKPQDFLFPSTTNILTPPVKK----FITRKEIVPVQETEKRGLIW 1162          
BLAST of mRNA_C-tenellus_contig11114.1.1 vs. uniprot
Match: G5AEJ4_PHYSP (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=G5AEJ4_PHYSP)

HSP 1 Score: 119 bits (298), Expect = 1.490e-26
Identity = 93/288 (32.29%), Postives = 139/288 (48.26%), Query Frame = 1
Query:   10 NRASWKTVKGFRWPFPKSPHDYIVHPKKLSESRVEILREPWVENELRGGRIQSQADDSDNNPIPGREDFYSIPSNGKMIFGGLEPPEYDRDCDTSLIGNRSRLPRGRMKSCVNPGFFQSVHLGGDGLAKEKADTKLKEEEIWKSKVVVDNTD--FLV-GSFSV--RDRPLQVDRAKEILQSPIKKTAFRMVRNARLPSGRRALLRPAPVSAFASEPFVD--HKDFTVDLRGDDPELFVGTDPETGNRVDF---ETHLHRDRMKKKSHIICSRRKHPPIYEHEKLGPRW 843
            +R  W T +GF +P P+ P +Y  H    SE+R E LR+P+V+N      +   + +  +   P   +F ++PS   MIFGG               G+ S          VNP +F+SVHL G+GL  E  +   KE+  W+ ++VVD     FL  G+     R++P Q+D+  +IL+ P +    R+V+NA LPSG+R  L  APV+    E +       F   LR  D   FV TD  +G   DF    T++    +KK      +R++  P+ E EK G  W
Sbjct:  722 DRKKWTTQRGFIYPAPRQPAEYYKHANAPSEARCEDLRQPFVDNVNHPKPVSRDSGEPGSRKGP---EFSTLPSKD-MIFGGTN-------------GDGS----------VNPDYFRSVHLCGEGLRLEMEEALKKEQGEWERRLVVDKKQLKFLAHGNICSLPREKPSQLDKISDILKGPAQSKPIRIVKNATLPSGKRVPLEKAPVTIHNQEEYAGCVAATFASTLRPSDSNQFVATDATSGQPKDFFPSTTNILTPPVKK----FITRKEITPVRETEKRGLVW 978          
BLAST of mRNA_C-tenellus_contig11114.1.1 vs. uniprot
Match: A0A6G0XFT8_9STRA (CBFD_NFYB_HMF domain-containing protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0XFT8_9STRA)

HSP 1 Score: 115 bits (287), Expect = 4.470e-25
Identity = 93/288 (32.29%), Postives = 139/288 (48.26%), Query Frame = 1
Query:   10 NRASWKTVKGFRWPFPKSPHDYIVHPKKLSESRVEILREPWVENELRGGRIQSQADDSDNNPIPGREDFYSIPSNGKMIFGGLEPPEYDRDCDTSLIGNRSRLPRGRMKSCVNPGFFQSVHLGGDGLAKEKADTKLKEEEIWKSKVVVD--NTDFLVGSFSV---RDRPLQVDRAKEILQSPIKKTAFRMVRNARLPSGRRALLRPAPVSAFASEPFVDHKDFTVDLRGDDPELFVGTDPETGNRVDFE----THLHRDRMKKKSHIICSRRKHPPIYEHEKLGPRWE 846
            ++A W T  GF +P P+ P ++  H    S +R E L  PW+EN L   +  S+ D    N    +  F S+PS   M+FGG           T+  G+            VNP +F+SVHL GDGLAKE  + K KE + W  K+VVD  N  F+     +   R RP  +D+ ++IL   ++    R+VRNA+LPSG++  L   PVS    + +       ++ R  DP  FV    + G+  DF     T +    + K + ++  R+   P+ E EK G RW+
Sbjct:  848 SKAQWTTPGGFVYPAPRQPSEFYKHKDAPSAARCEDLHAPWIEN-LYHPQPLSRGDGG--NEDRHKVSFDSLPSKD-MVFGG-----------TNADGS------------VNPEYFKSVHLVGDGLAKEMEEAKAKEHKEWLEKIVVDHDNLRFIAHGDIMGQGRARPSALDKPQDILAGTVRSKPLRIVRNAKLPSGKQVPLHAMPVSIMNQDEYKGGAKQMIE-RDRDPSQFVARTNQ-GDPKDFFFPSITQILVPNVNKHTTLLKPRK---PLAESEKTGLRWK 1103          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11114.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ34_ECTSI2.240e-10356.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1U4M0_9STRA3.970e-7845.99Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S3YKX3_HETAK1.520e-6847.95Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A836CB85_9STRA4.190e-5441.02Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8J2S3F3_9STRA4.990e-4539.13Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S1CKA2_9STRA3.390e-3443.71Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
W2Q5K6_PHYPN3.140e-2832.63Uncharacterized protein n=9 Tax=Phytophthora TaxID... [more]
A0A329SI59_9STRA1.140e-2632.18Uncharacterized protein n=1 Tax=Phytophthora cacto... [more]
G5AEJ4_PHYSP1.490e-2632.29Uncharacterized protein n=7 Tax=Phytophthora TaxID... [more]
A0A6G0XFT8_9STRA4.470e-2532.29CBFD_NFYB_HMF domain-containing protein n=2 Tax=Ap... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig11114contigC-tenellus_contig11114:2128..4414 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FQ34
PFAMsDUF4550
Model size846
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue3.67e-104
EggNOG OGs28MGN@1|root,2QU03@2759|Eukaryota
DescriptionUncharacterized protein FLJ43738-like
Cds size846
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789164.0203543-CDS-C-tenellus_contig11114:2127..25291680789164.0203543-CDS-C-tenellus_contig11114:2127..2529Choristocarpus tenellus KU2346CDSC-tenellus_contig11114 2128..2529 -
1680789164.032229-CDS-C-tenellus_contig11114:3386..35691680789164.032229-CDS-C-tenellus_contig11114:3386..3569Choristocarpus tenellus KU2346CDSC-tenellus_contig11114 3387..3569 -
1680789164.0425568-CDS-C-tenellus_contig11114:4153..44141680789164.0425568-CDS-C-tenellus_contig11114:4153..4414Choristocarpus tenellus KU2346CDSC-tenellus_contig11114 4154..4414 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig11114.1.1prot_C-tenellus_contig11114.1.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig11114 2128..4414 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig11114.1.1

>prot_C-tenellus_contig11114.1.1 ID=prot_C-tenellus_contig11114.1.1|Name=mRNA_C-tenellus_contig11114.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=282bp
QARNRASWKTVKGFRWPFPKSPHDYIVHPKKLSESRVEILREPWVENELR
GGRIQSQADDSDNNPIPGREDFYSIPSNGKMIFGGLEPPEYDRDCDTSLI
GNRSRLPRGRMKSCVNPGFFQSVHLGGDGLAKEKADTKLKEEEIWKSKVV
VDNTDFLVGSFSVRDRPLQVDRAKEILQSPIKKTAFRMVRNARLPSGRRA
LLRPAPVSAFASEPFVDHKDFTVDLRGDDPELFVGTDPETGNRVDFETHL
HRDRMKKKSHIICSRRKHPPIYEHEKLGPRWE
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mRNA from alignment at C-tenellus_contig11114:2128..4414-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig11114.1.1 ID=mRNA_C-tenellus_contig11114.1.1|Name=mRNA_C-tenellus_contig11114.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2287bp|location=Sequence derived from alignment at C-tenellus_contig11114:2128..4414- (Choristocarpus tenellus KU2346)
CAGGCAAGGAATAGAGCTTCCTGGAAGACTGTCAAAGGGTTCAGGTGGCC ATTTCCCAAGAGTCCTCATGACTACATCGTCCACCCAAAAAAACTTAGTG AGAGTCGAGTGGAGATTCTGCGTGAGCCATGGGTTGAAAACGAGCTTCGG GGGGGAAGAATCCAGTCACAGGCTGATGATTCGGACAACAATCCTATTCC TGGAAGGGAGGACTTTTACAGTATACCTTCCAACGGGAAAATGATATTTG GGGGGCTAGAGGTATGTTCTCACTGATTGGTACTTCATTTCTTTGGTATA GTGTGAGTACTTGTGGATAGGGGGGGTACAGGGGAAGGGGGGGAACACTT TTCCTTGGAAATTCTGTAGGAAAGTCGGGGCATGGCAACGTCTTCAGCAG GGCACATGATATATCCATAATAGTTTTCGGTTTGTGAGTTGATCACTTGG AGGTTGGCGTGTCCAATAGTCAACTAGGACCAGGTAGGTTAGGATTGGGT CTTTGTATTGTAGGTGCAGCGAACGTTTGAACGCTCAACATAATAGAGTG CAAAAATAGTGCCTAGTAAGAAGACATAGTTTGAAGCACTTTTTATCTTT AGAAAGCTCCACCACGGTAATCGAAACCATGGCCTTAGGACAGAGAAGAT AAGGTTGTCAATGCGATTTGGCTGACGAAGATTCTGATTTGATGGCTATT ATTGAAGCCTGTGAATATGTCACTGCTGACTTCATATCTTTGCAACTAGT ATTAGGATCCCAGCAATGCCCAACACGCTGGTGGATTGAACACATTTCTT TTTATTCATAAACCTACAACTTGCTACGCCTTCCCGTCATTGCAGCCGCC GGAATATGACAGAGATTGTGATACAAGCCTCATTGGCAATCGTTCACGCC TTCCCAGGGGACGTATGAAGTCCTGTGTAAACCCTGGATTCTTCCAAAGT GTCCACCTCGGGGGTGATGGTCTGGCAAAGGAAAAGGCCGATACCAAATT GAAGGAGGAAGAGATCTGGAAGAGCAAGGTAATGCCGTTTTCCAGGCACT GATCAAGTAGGGGCCTAAATGATTACTACCCCATCTCAAATGCTACAGAC TAGCTTTTTTTTATTATAGGGGGGTAGAGTCAGGACAAACAAGATGTTGG AATAGTCTCCAGGCACAACACACACACTCCTAATTTATCCTTCTTTCAGT GGTTTGTGGAAACGCTTGTCATGTTGGGAACTGTGTCCATTAGGTGGCTA TTCCATGACCCCGATATGTGAAAAAGTGACTTGAAATCAGAAAATAATAG GAGCCCTGAGTCATTGACTGTATCTGACCTATATTGCAAAGACAGGATAG GCTCCATGTGGAAATGGGCTACTTCCATCAAATATGATAAGTGCTGTGTG TGTGTGTTTTTGCTCTCGTAGGGACCAGATTATATATTGAGATATTTCAG GGCTAAGAGCCGGGGTTAGGGTTTAGGGTGTTGGACTGTGTATTGCGATA TCTCAACCCCACTCCACCCATCAACGATTGGCCTCTCTACCTCAGTGTAT GCCTAGCAATTACTTTTCCCATCAATAAGGCTAGGGTTATACTCAGAACT AAAATCAATATCGCCTGTTTCATGCTTGCTACTCTTGTTCCAATCATCGC TTTTCCTCAAGGAAAGCAGAAATATTCAAAGCAATTCGGTCCATACAAAA AGTATACATCACTCTTGAGCCTATGCATCTCCTAAAGGCCTACTACAAAA TATCTCGTCGCCCTTCCACCACATATTTCTACATTAATATATATAAGTAT AACATTATATAAATGTAATATATCTATGAATATAAAAATCTAAAATTTAT ATATGTGCTCGATCTCATCCGCAACCCACTGGTAGGTAGTTGTGGACAAC ACAGACTTTCTCGTGGGAAGTTTCAGTGTACGTGACCGGCCCCTTCAGGT GGATAGGGCCAAGGAAATTCTCCAATCACCCATCAAGAAGACTGCGTTTC GCATGGTCCGGAATGCTCGCCTGCCCAGTGGACGCCGCGCCCTTCTGAGA CCCGCCCCTGTTTCTGCCTTCGCCTCAGAGCCCTTTGTCGATCACAAGGA TTTCACCGTAGACCTTCGTGGGGACGACCCAGAGCTTTTTGTGGGGACAG ACCCAGAAACGGGAAATAGAGTTGACTTTGAGACACACCTACACAGGGAT CGCATGAAAAAGAAGTCGCACATCATCTGCTCCCGCAGGAAGCACCCACC AATATACGAACACGAAAAGCTGGGTCCTCGATGGGAG
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Coding sequence (CDS) from alignment at C-tenellus_contig11114:2128..4414-

>mRNA_C-tenellus_contig11114.1.1 ID=mRNA_C-tenellus_contig11114.1.1|Name=mRNA_C-tenellus_contig11114.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=846bp|location=Sequence derived from alignment at C-tenellus_contig11114:2128..4414- (Choristocarpus tenellus KU2346)
CAGGCAAGGAATAGAGCTTCCTGGAAGACTGTCAAAGGGTTCAGGTGGCC
ATTTCCCAAGAGTCCTCATGACTACATCGTCCACCCAAAAAAACTTAGTG
AGAGTCGAGTGGAGATTCTGCGTGAGCCATGGGTTGAAAACGAGCTTCGG
GGGGGAAGAATCCAGTCACAGGCTGATGATTCGGACAACAATCCTATTCC
TGGAAGGGAGGACTTTTACAGTATACCTTCCAACGGGAAAATGATATTTG
GGGGGCTAGAGCCGCCGGAATATGACAGAGATTGTGATACAAGCCTCATT
GGCAATCGTTCACGCCTTCCCAGGGGACGTATGAAGTCCTGTGTAAACCC
TGGATTCTTCCAAAGTGTCCACCTCGGGGGTGATGGTCTGGCAAAGGAAA
AGGCCGATACCAAATTGAAGGAGGAAGAGATCTGGAAGAGCAAGGTAGTT
GTGGACAACACAGACTTTCTCGTGGGAAGTTTCAGTGTACGTGACCGGCC
CCTTCAGGTGGATAGGGCCAAGGAAATTCTCCAATCACCCATCAAGAAGA
CTGCGTTTCGCATGGTCCGGAATGCTCGCCTGCCCAGTGGACGCCGCGCC
CTTCTGAGACCCGCCCCTGTTTCTGCCTTCGCCTCAGAGCCCTTTGTCGA
TCACAAGGATTTCACCGTAGACCTTCGTGGGGACGACCCAGAGCTTTTTG
TGGGGACAGACCCAGAAACGGGAAATAGAGTTGACTTTGAGACACACCTA
CACAGGGATCGCATGAAAAAGAAGTCGCACATCATCTGCTCCCGCAGGAA
GCACCCACCAATATACGAACACGAAAAGCTGGGTCCTCGATGGGAG
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