mRNA_C-tenellus_contig1110.7.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig1110.7.1 vs. uniprot
Match: D8LSF3_ECTSI (40S ribosomal protein S26 n=3 Tax=Eukaryota TaxID=2759 RepID=D8LSF3_ECTSI) HSP 1 Score: 192 bits (488), Expect = 3.850e-57 Identity = 98/106 (92.45%), Postives = 103/106 (97.17%), Query Frame = 1 Query: 1 MTVKRRNHGRNKKGRGHVLRVRCASTAKAIPKDKAIKRFIVRNIVDASSLRDIREASVFENYALPKLYIKQYYCVEAAVHQRIVRSRSSVHRRNREPPMRHRLKRD 318 MTVKRRNHGRNKKGRGHV+RVRCASTAKAIPKDKAIKRFIVRNIVDASSLRDIREASVF+NYALPKLYIKQYYCVEAAVHQRIVRSRS+ RRNR+PP+RHR KRD Sbjct: 1 MTVKRRNHGRNKKGRGHVVRVRCASTAKAIPKDKAIKRFIVRNIVDASSLRDIREASVFDNYALPKLYIKQYYCVEAAVHQRIVRSRSAETRRNRDPPVRHRPKRD 106
BLAST of mRNA_C-tenellus_contig1110.7.1 vs. uniprot
Match: A0A835YLU3_9STRA (40S ribosomal protein S26 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLU3_9STRA) HSP 1 Score: 181 bits (459), Expect = 8.130e-53 Identity = 94/106 (88.68%), Postives = 98/106 (92.45%), Query Frame = 1 Query: 1 MTVKRRNHGRNKKGRGHVLRVRCASTAKAIPKDKAIKRFIVRNIVDASSLRDIREASVFENYALPKLYIKQYYCVEAAVHQRIVRSRSSVHRRNREPPMRHRLKRD 318 MTVKRRNHGRNKKGRGHV RVRC STAKAIPKDKAIKRFIVRNIVDASSLRD+REASV+ NYALPKLYIKQYYCVEAAVHQRIVRSRS+ RRNREPP R R KR+ Sbjct: 1 MTVKRRNHGRNKKGRGHVKRVRCVSTAKAIPKDKAIKRFIVRNIVDASSLRDLREASVYANYALPKLYIKQYYCVEAAVHQRIVRSRSAEARRNREPPARVRPKRE 106
BLAST of mRNA_C-tenellus_contig1110.7.1 vs. uniprot
Match: A0A7S2SUN8_9STRA (40S ribosomal protein S26 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUN8_9STRA) HSP 1 Score: 176 bits (445), Expect = 1.390e-50 Identity = 91/102 (89.22%), Postives = 95/102 (93.14%), Query Frame = 1 Query: 1 MTVKRRNHGRNKKGRGHVLRVRCASTAKAIPKDKAIKRFIVRNIVDASSLRDIREASVFENYALPKLYIKQYYCVEAAVHQRIVRSRSSVHRRNREPPMRHR 306 MTVKRR+HGRNKKGRGHV RVRCAST KAIPKDKAIKRFIVRNIVDASS+RDIREAS FENYALPKLYIKQYY VEAAVHQRIVRSRS+ +RRNREPP R R Sbjct: 15 MTVKRRSHGRNKKGRGHVKRVRCASTGKAIPKDKAIKRFIVRNIVDASSMRDIREASAFENYALPKLYIKQYYSVEAAVHQRIVRSRSTENRRNREPPARFR 116
BLAST of mRNA_C-tenellus_contig1110.7.1 vs. uniprot
Match: A0A7S2MQP1_9STRA (40S ribosomal protein S26 n=4 Tax=Ochrophyta TaxID=2696291 RepID=A0A7S2MQP1_9STRA) HSP 1 Score: 174 bits (440), Expect = 1.060e-49 Identity = 88/100 (88.00%), Postives = 93/100 (93.00%), Query Frame = 1 Query: 1 MTVKRRNHGRNKKGRGHVLRVRCASTAKAIPKDKAIKRFIVRNIVDASSLRDIREASVFENYALPKLYIKQYYCVEAAVHQRIVRSRSSVHRRNREPPMR 300 MTVKRRNHGRNKKGRGHV RVRCAST KAIPKDKAIKRFIVRNIVDASS+RDIR+AS FE YALPK+YIKQYYC+EAAVHQRIVRSRS +RRNREPP R Sbjct: 24 MTVKRRNHGRNKKGRGHVKRVRCASTGKAIPKDKAIKRFIVRNIVDASSMRDIRDASAFEAYALPKIYIKQYYCIEAAVHQRIVRSRSIENRRNREPPAR 123
BLAST of mRNA_C-tenellus_contig1110.7.1 vs. uniprot
Match: A0A7S3K046_9STRA (40S ribosomal protein S26 n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K046_9STRA) HSP 1 Score: 171 bits (433), Expect = 5.260e-49 Identity = 85/102 (83.33%), Postives = 92/102 (90.20%), Query Frame = 1 Query: 1 MTVKRRNHGRNKKGRGHVLRVRCASTAKAIPKDKAIKRFIVRNIVDASSLRDIREASVFENYALPKLYIKQYYCVEAAVHQRIVRSRSSVHRRNREPPMRHR 306 M VKRR HGRNKKGRGHVLRVRC ST KAIPKDKAIKRF+VRNIVDASS+RDIR+AS +E+YALPKLYIKQYYC+EAAVHQRIVR RS R+NREPPMR R Sbjct: 1 MAVKRRAHGRNKKGRGHVLRVRCVSTGKAIPKDKAIKRFVVRNIVDASSMRDIRDASAYESYALPKLYIKQYYCIEAAVHQRIVRLRSRTERKNREPPMRRR 102
BLAST of mRNA_C-tenellus_contig1110.7.1 vs. uniprot
Match: A0A7S3MCB3_9STRA (40S ribosomal protein S26 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MCB3_9STRA) HSP 1 Score: 166 bits (419), Expect = 7.100e-47 Identity = 82/102 (80.39%), Postives = 93/102 (91.18%), Query Frame = 1 Query: 1 MTVKRRNHGRNKKGRGHVLRVRCASTAKAIPKDKAIKRFIVRNIVDASSLRDIREASVFENYALPKLYIKQYYCVEAAVHQRIVRSRSSVHRRNREPPMRHR 306 MTVKRRNHGRNK GRGHV RVRC STAKAIPKDKAIKRF+VRNIVD+S+LRDI+E+S +ENY LPKLYIKQYYC+EAAVHQRIVR RS++ R+NR PP+R R Sbjct: 1 MTVKRRNHGRNKHGRGHVKRVRCVSTAKAIPKDKAIKRFLVRNIVDSSALRDIKESSAYENYQLPKLYIKQYYCIEAAVHQRIVRVRSALDRKNRAPPVRVR 102
BLAST of mRNA_C-tenellus_contig1110.7.1 vs. uniprot
Match: A0A7S0GMG9_9STRA (40S ribosomal protein S26 n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GMG9_9STRA) HSP 1 Score: 163 bits (412), Expect = 7.730e-46 Identity = 84/106 (79.25%), Postives = 91/106 (85.85%), Query Frame = 1 Query: 1 MTVKRRNHGRNKKGRGHVLRVRCASTAKAIPKDKAIKRFIVRNIVDASSLRDIREASVFENYALPKLYIKQYYCVEAAVHQRIVRSRSSVHRRNREPPMRHRLKRD 318 MTVKRRNHGRNKKGRGHV RVRCAST KAIPKDKAIKRFIVRNIVDASSLRDI+EAS +++Y LPKLY+K YYCVEAAVHQRIVR RS R+ R PP R KR+ Sbjct: 1 MTVKRRNHGRNKKGRGHVKRVRCASTGKAIPKDKAIKRFIVRNIVDASSLRDIKEASAYDDYTLPKLYLKMYYCVEAAVHQRIVRGRSREGRKIRTPPPRPGFKRN 106
BLAST of mRNA_C-tenellus_contig1110.7.1 vs. uniprot
Match: A0A067D0A6_SAPPC (40S ribosomal protein S26 n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067D0A6_SAPPC) HSP 1 Score: 160 bits (406), Expect = 5.960e-45 Identity = 80/105 (76.19%), Postives = 92/105 (87.62%), Query Frame = 1 Query: 1 MTVKRRNHGRNKKGRGHVLRVRCASTAKAIPKDKAIKRFIVRNIVDASSLRDIREASVFENYALPKLYIKQYYCVEAAVHQRIVRSRSSVHRRNREPPMRHRLKR 315 MTVKRRNHGRNKKGRGHV RV C STAK IPKDKAIKRF+VRN+VDAS++RD++EASV+E+YALPK+YIK YY +EAA+HQRIVR RS R+NREPP R R KR Sbjct: 1 MTVKRRNHGRNKKGRGHVKRVHCVSTAKLIPKDKAIKRFVVRNMVDASAMRDLKEASVYESYALPKIYIKNYYSIEAAIHQRIVRVRSVDGRKNREPPARFRPKR 105
BLAST of mRNA_C-tenellus_contig1110.7.1 vs. uniprot
Match: A0A6S9R5Y9_CHRCT (40S ribosomal protein S26 n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A6S9R5Y9_CHRCT) HSP 1 Score: 161 bits (408), Expect = 7.730e-45 Identity = 83/102 (81.37%), Postives = 89/102 (87.25%), Query Frame = 1 Query: 1 MTVKRRNHGRNKKGRGHVLRVRCASTAKAIPKDKAIKRFIVRNIVDASSLRDIREASVFENYALPKLYIKQYYCVEAAVHQRIVRSRSSVHRRNREPPMRHR 306 MTVKRR HGRNKKGRGHV RVRC ST KAIPKDKAIKRFIVRNIV+AS+LRDIREAS ENY LPK+YIKQYY VEAA+HQR+VR RS RRNREPP R+R Sbjct: 14 MTVKRRAHGRNKKGRGHVNRVRCVSTGKAIPKDKAIKRFIVRNIVEASALRDIREASCIENYQLPKIYIKQYYSVEAAIHQRVVRVRSREARRNREPPQRNR 115
BLAST of mRNA_C-tenellus_contig1110.7.1 vs. uniprot
Match: A0A4D9D267_9STRA (40S ribosomal protein S26 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D267_9STRA) HSP 1 Score: 160 bits (405), Expect = 8.380e-45 Identity = 83/102 (81.37%), Postives = 88/102 (86.27%), Query Frame = 1 Query: 1 MTVKRRNHGRNKKGRGHVLRVRCASTAKAIPKDKAIKRFIVRNIVDASSLRDIREASVFENYALPKLYIKQYYCVEAAVHQRIVRSRSSVHRRNREPPMRHR 306 MTVKRRNHGRNKKGRGHV RVRCAST KA+PKDKAIKR +VR+IVD SS RDI+EA VFENY LPKLYIKQYY VEAAVHQR+VRSRS RR REPP R R Sbjct: 1 MTVKRRNHGRNKKGRGHVKRVRCASTGKAVPKDKAIKRMVVRSIVDQSSARDIKEARVFENYQLPKLYIKQYYSVEAAVHQRLVRSRSKEDRRIREPPERKR 102 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1110.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1110.7.1 >prot_C-tenellus_contig1110.7.1 ID=prot_C-tenellus_contig1110.7.1|Name=mRNA_C-tenellus_contig1110.7.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=107bp MTVKRRNHGRNKKGRGHVLRVRCASTAKAIPKDKAIKRFIVRNIVDASSLback to top mRNA from alignment at C-tenellus_contig1110:10760..13525+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig1110.7.1 ID=mRNA_C-tenellus_contig1110.7.1|Name=mRNA_C-tenellus_contig1110.7.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2766bp|location=Sequence derived from alignment at C-tenellus_contig1110:10760..13525+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig1110:10760..13525+ >mRNA_C-tenellus_contig1110.7.1 ID=mRNA_C-tenellus_contig1110.7.1|Name=mRNA_C-tenellus_contig1110.7.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=321bp|location=Sequence derived from alignment at C-tenellus_contig1110:10760..13525+ (Choristocarpus tenellus KU2346)back to top |