mRNA_C-tenellus_contig11077.1.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig11077.1.2 vs. uniprot
Match: A4S0W7_OSTLU (Histone H3 n=6 Tax=Eukaryota TaxID=2759 RepID=A4S0W7_OSTLU) HSP 1 Score: 234 bits (598), Expect = 3.100e-75 Identity = 125/136 (91.91%), Postives = 127/136 (93.38%), Query Frame = 3 Query: 108 MARTKQTARKSTGGKAPXXXXXXXXARKSAPTAGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSTAILALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 515 MARTKQTARKSTGGKAP ARKSAPT GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSTA+LALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSTAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of mRNA_C-tenellus_contig11077.1.2 vs. uniprot
Match: E1ZR66_CHLVA (Histone H3 n=10 Tax=Eukaryota TaxID=2759 RepID=E1ZR66_CHLVA) HSP 1 Score: 234 bits (597), Expect = 4.400e-75 Identity = 125/136 (91.91%), Postives = 127/136 (93.38%), Query Frame = 3 Query: 108 MARTKQTARKSTGGKAPXXXXXXXXARKSAPTAGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSTAILALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 515 MARTKQTARKSTGGKAP ARKSAPT GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+LALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of mRNA_C-tenellus_contig11077.1.2 vs. uniprot
Match: A0A7S3FY28_9SPIT (Histone H3 (Fragment) n=7 Tax=Eukaryota TaxID=2759 RepID=A0A7S3FY28_9SPIT) HSP 1 Score: 234 bits (596), Expect = 6.450e-75 Identity = 124/136 (91.18%), Postives = 127/136 (93.38%), Query Frame = 3 Query: 108 MARTKQTARKSTGGKAPXXXXXXXXARKSAPTAGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSTAILALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 515 MARTKQTARKSTGGKAP ARKSAPT GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+LALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKD+QLARRIRGERA Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA 136
BLAST of mRNA_C-tenellus_contig11077.1.2 vs. uniprot
Match: H33_ARATH (Histone H3.3 n=266 Tax=cellular organisms TaxID=131567 RepID=H33_ARATH) HSP 1 Score: 233 bits (594), Expect = 1.260e-74 Identity = 125/136 (91.91%), Postives = 126/136 (92.65%), Query Frame = 3 Query: 108 MARTKQTARKSTGGKAPXXXXXXXXARKSAPTAGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSTAILALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 515 MARTKQTARKSTGGKAP ARKSAPT GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+LALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of mRNA_C-tenellus_contig11077.1.2 vs. uniprot
Match: B8CC53_THAPS (Histone H3 n=8 Tax=cellular organisms TaxID=131567 RepID=B8CC53_THAPS) HSP 1 Score: 233 bits (594), Expect = 1.260e-74 Identity = 124/136 (91.18%), Postives = 127/136 (93.38%), Query Frame = 3 Query: 108 MARTKQTARKSTGGKAPXXXXXXXXARKSAPTAGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSTAILALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 515 MARTKQTARKSTGGKAP ARKSAPTAGGVKKPHRYRPGTVALREIRKYQKST+LLIRK PFQRLVREIAQDFKTDLRFQSTA+LALQEA+EAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTAGGVKKPHRYRPGTVALREIRKYQKSTDLLIRKAPFQRLVREIAQDFKTDLRFQSTAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of mRNA_C-tenellus_contig11077.1.2 vs. uniprot
Match: A5BX39_VITVI (Histone H3 n=5 Tax=Mesangiospermae TaxID=1437183 RepID=A5BX39_VITVI) HSP 1 Score: 233 bits (594), Expect = 1.300e-74 Identity = 125/136 (91.91%), Postives = 126/136 (92.65%), Query Frame = 3 Query: 108 MARTKQTARKSTGGKAPXXXXXXXXARKSAPTAGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSTAILALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 515 MARTKQTARKSTGGKAP ARKSAPT GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+LALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 2 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 137
BLAST of mRNA_C-tenellus_contig11077.1.2 vs. uniprot
Match: A0A7S0JMT0_9EUKA (Histone H3 n=12 Tax=Eukaryota TaxID=2759 RepID=A0A7S0JMT0_9EUKA) HSP 1 Score: 233 bits (594), Expect = 1.340e-74 Identity = 125/136 (91.91%), Postives = 126/136 (92.65%), Query Frame = 3 Query: 108 MARTKQTARKSTGGKAPXXXXXXXXARKSAPTAGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSTAILALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 515 MARTKQTARKSTGGKAP ARKSAPT GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+LALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 3 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 138
BLAST of mRNA_C-tenellus_contig11077.1.2 vs. uniprot
Match: A0A6A4NAB8_LUPAL (Histone H3 n=2 Tax=Mesangiospermae TaxID=1437183 RepID=A0A6A4NAB8_LUPAL) HSP 1 Score: 233 bits (594), Expect = 1.430e-74 Identity = 125/136 (91.91%), Postives = 126/136 (92.65%), Query Frame = 3 Query: 108 MARTKQTARKSTGGKAPXXXXXXXXARKSAPTAGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSTAILALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 515 MARTKQTARKSTGGKAP ARKSAPT GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+LALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 5 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 140
BLAST of mRNA_C-tenellus_contig11077.1.2 vs. uniprot
Match: A0A6P6TAN2_COFAR (Histone H3 n=2 Tax=lamiids TaxID=91888 RepID=A0A6P6TAN2_COFAR) HSP 1 Score: 233 bits (594), Expect = 1.430e-74 Identity = 125/136 (91.91%), Postives = 126/136 (92.65%), Query Frame = 3 Query: 108 MARTKQTARKSTGGKAPXXXXXXXXARKSAPTAGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSTAILALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 515 MARTKQTARKSTGGKAP ARKSAPT GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+LALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 5 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 140
BLAST of mRNA_C-tenellus_contig11077.1.2 vs. uniprot
Match: A0A7S1XCF9_9RHOD (Histone H3 n=5 Tax=Eukaryota TaxID=2759 RepID=A0A7S1XCF9_9RHOD) HSP 1 Score: 233 bits (594), Expect = 1.480e-74 Identity = 124/136 (91.18%), Postives = 127/136 (93.38%), Query Frame = 3 Query: 108 MARTKQTARKSTGGKAPXXXXXXXXARKSAPTAGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSTAILALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 515 MARTKQTARKSTGGKAP ARKSAP AGGVKKPHRYRPGTVALREIRKYQKST+LLIRKLPFQRLVREIAQDFKTDLRFQ+TA+LALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 6 MARTKQTARKSTGGKAPRKQLATKAARKSAPAAGGVKKPHRYRPGTVALREIRKYQKSTDLLIRKLPFQRLVREIAQDFKTDLRFQTTAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 141 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11077.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig11077.1.2 >prot_C-tenellus_contig11077.1.2 ID=prot_C-tenellus_contig11077.1.2|Name=mRNA_C-tenellus_contig11077.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=137bp MARTKQTARKSTGGKAPRKQLATKAARKSAPTAGGVKKPHRYRPGTVALRback to top mRNA from alignment at C-tenellus_contig11077:1486..3216- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig11077.1.2 ID=mRNA_C-tenellus_contig11077.1.2|Name=mRNA_C-tenellus_contig11077.1.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1731bp|location=Sequence derived from alignment at C-tenellus_contig11077:1486..3216- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig11077:1486..3216- >mRNA_C-tenellus_contig11077.1.2 ID=mRNA_C-tenellus_contig11077.1.2|Name=mRNA_C-tenellus_contig11077.1.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=411bp|location=Sequence derived from alignment at C-tenellus_contig11077:1486..3216- (Choristocarpus tenellus KU2346)back to top |