mRNA_C-tenellus_contig1104.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig1104.2.1 vs. uniprot
Match: D7FN30_ECTSI (Dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN30_ECTSI) HSP 1 Score: 304 bits (778), Expect = 7.290e-92 Identity = 153/210 (72.86%), Postives = 180/210 (85.71%), Query Frame = 2 Query: 2 RNTQVVEQMYSLLSHYDFKVPSEDMVQVDDLRTIQTQYQGEMDAAREENEEKMPDMVRDLDTNIARLNDQLVQLGAQLDEGVFTDAVHFSNPGPVLAELEKVKAKLDQVEGLEKQYSAYQALFGITVYSYKNLVKTQEKFDQMNGLWQMVNRWNEKYESWMNDSFVSLNAEEMNTEVQVFVKDSFAAHKKMNCDVTGRLKEVTQDFKAKM 631 RN QVVEQMY+LL+ YD K PSEDMVQVDDLRTIQ QYQ M++AR+E E++MPDMVRDLDTNIARLNDQLVQLGA LDEGVF DA F NPG VL EL++VK +L V+ L KQYSAYQALFGITVYSYKNL K Q+K+DQM+GLWQ ++RWNEK +SWMND F S++AE +NTEVQVFVKD+F+AHKKM+ +VT RLKE TQ+FKA++ Sbjct: 780 RNAQVVEQMYALLAQYDVKAPSEDMVQVDDLRTIQAQYQESMESARDEKEKRMPDMVRDLDTNIARLNDQLVQLGASLDEGVFVDAACFGNPGLVLTELDRVKQRLAAVDTLAKQYSAYQALFGITVYSYKNLTKAQDKYDQMDGLWQTISRWNEKSDSWMNDPFTSVDAEAVNTEVQVFVKDAFSAHKKMSSEVTSRLKEATQEFKAQL 989
BLAST of mRNA_C-tenellus_contig1104.2.1 vs. uniprot
Match: A0A6H5KIA4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIA4_9PHAE) HSP 1 Score: 266 bits (681), Expect = 7.870e-79 Identity = 140/210 (66.67%), Postives = 165/210 (78.57%), Query Frame = 2 Query: 2 RNTQVVEQMYSLLSHYDFKVPSEDMVQVDDLRTIQTQYQGEMDAAREENEEKMPDMVRDLDTNIARLNDQLVQLGAQLDEGVFTDAVHFSNPGPVLAELEKVKAKLDQVEGLEKQYSAYQALFGITVYSYKNLVKTQEKFDQMNGLWQMVNRWNEKYESWMNDSFVSLNAEEMNTEVQVFVKDSFAAHKKMNCDVTGRLKEVTQDFKAKM 631 RN QVVEQMY+LL+ YD K PSEDMVQVDDLRTIQ QYQ M++AR+E E++MPDMVRDLDTNIARLNDQLVQLGA LDEGVF DA F N G VLAEL++VK +L V+ L KQYSAYQALFGITVYSYKNL K Q+K+DQM+ LWQ ++RWNEK +SWMND F S++AE +NTE M+ +VT RLKE TQ+FKA++ Sbjct: 268 RNAQVVEQMYALLAQYDVKAPSEDMVQVDDLRTIQAQYQESMESARDEKEKRMPDMVRDLDTNIARLNDQLVQLGASLDEGVFVDATSFGNTGLVLAELDRVKQRLAAVDTLAKQYSAYQALFGITVYSYKNLSKAQDKYDQMDALWQTISRWNEKSDSWMNDPFTSVDAEAVNTE--------------MSSEVTSRLKEATQEFKAQL 463
BLAST of mRNA_C-tenellus_contig1104.2.1 vs. uniprot
Match: A0A1Z9QCI5_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Phycisphaeraceae bacterium TMED231 TaxID=1986831 RepID=A0A1Z9QCI5_9BACT) HSP 1 Score: 240 bits (613), Expect = 1.090e-69 Identity = 115/210 (54.76%), Postives = 160/210 (76.19%), Query Frame = 2 Query: 2 RNTQVVEQMYSLLSHYDFKVPSEDMVQVDDLRTIQTQYQGEMDAAREENEEKMPDMVRDLDTNIARLNDQLVQLGAQLDEGVFTDAVHFSNPGPVLAELEKVKAKLDQVEGLEKQYSAYQALFGITVYSYKNLVKTQEKFDQMNGLWQMVNRWNEKYESWMNDSFVSLNAEEMNTEVQVFVKDSFAAHKKMNCDVTGRLKEVTQDFKAKM 631 ++TQ+VEQMY LL+H++ K+ S+D+VQ+D+LR+ Q QY E +A+ +E++P+M + LD NIARLNDQLVQ+ QL+EGVF + HF +P PV++ELE V KL+ V+G KQY+A Q LFGIT Y+YKNL KTQE +D+M LW MV +WNE+YE WM+D F L+ EE+N EVQ++ K+SF+ HKK+N DVT +LK+ + +FK KM Sbjct: 560 KHTQMVEQMYQLLTHHEVKITSDDLVQLDELRSYQVQYNEETEASNTYRDERLPEMTQQLDMNIARLNDQLVQISGQLEEGVFVNVAHFDDPSPVISELEAVHQKLESVDGFAKQYTANQELFGITPYNYKNLRKTQESYDRMLTLWTMVQKWNEQYEGWMSDQFTELDVEEINKEVQLYAKESFSLHKKLNTDVTAKLKDKSVEFKNKM 769
BLAST of mRNA_C-tenellus_contig1104.2.1 vs. uniprot
Match: A0A6G0NNW5_9STRA (Dynein heavy chain 6, axonemal n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0NNW5_9STRA) HSP 1 Score: 182 bits (461), Expect = 2.840e-49 Identity = 97/210 (46.19%), Postives = 138/210 (65.71%), Query Frame = 2 Query: 2 RNTQVVEQMYSLLSHYDFKVPSEDMVQVDDLRTIQTQYQGEMDAAREENEEKMPDMVRDLDTNIARLNDQLVQLGAQLDEGVFTDAVHFSNPGPVLAELEKVKAKLDQVEGLEKQYSAYQALFGITVYSYKNLVKTQEKFDQMNGLWQMVNRWNEKYESWMNDSFVSLNAEEMNTEVQVFVKDSFAAHKKMNCDVTGRLKEVTQDFKAKM 631 +NT VV+++Y LL Y ++ SEDMVQ+DDLR++Q Y+ E +A ++ +M + LD NI RL++Q++QL QL G+F DA HF +P V +ELE VK +L Q++ L KQY+ YQ LF +T + Y NL TQE F ++ LW V +WNE Y M FV +NAE+++ +V V KD++A HKK++ DVT LK+ T DFK KM Sbjct: 744 KNTNVVDELYRLLGTYGVRISSEDMVQLDDLRSVQEGYKEETEAVDAFVASRLGEMTQQLDANIQRLDEQVLQLHNQLQGGLFIDASHFEDPSVVKSELESVKQRLTQLDELSKQYTEYQTLFNLTPFKYLNLQATQEYFGTVDSLWTAVEKWNELYLGAMTSPFVEVNAEDLSKDVAVAFKDAYALHKKLSNDVTAVLKDRTADFKLKM 953
BLAST of mRNA_C-tenellus_contig1104.2.1 vs. uniprot
Match: A0A421GEV9_9STRA (Bromo domain-containing protein n=19 Tax=Phytophthora TaxID=4783 RepID=A0A421GEV9_9STRA) HSP 1 Score: 181 bits (459), Expect = 5.370e-49 Identity = 96/210 (45.71%), Postives = 138/210 (65.71%), Query Frame = 2 Query: 2 RNTQVVEQMYSLLSHYDFKVPSEDMVQVDDLRTIQTQYQGEMDAAREENEEKMPDMVRDLDTNIARLNDQLVQLGAQLDEGVFTDAVHFSNPGPVLAELEKVKAKLDQVEGLEKQYSAYQALFGITVYSYKNLVKTQEKFDQMNGLWQMVNRWNEKYESWMNDSFVSLNAEEMNTEVQVFVKDSFAAHKKMNCDVTGRLKEVTQDFKAKM 631 +NT VV+++Y LL Y ++ SEDMVQ+DDLR++Q Y+ E +A ++ +M + LD NI RL++Q++QL QL G+F D+ HF +P V ELE VK +L Q++ L KQY+ YQALF +T + Y NL TQE F + LW V +WNE Y + M FV +NAE+++ +V V KD++A HKK++ DVT LK+ T +FK KM Sbjct: 778 KNTNVVDELYRLLGTYGVRISSEDMVQLDDLRSVQESYKEETEAVDAFVASRVGEMTQQLDANIQRLDEQVLQLHNQLQVGLFIDSSHFEDPSLVKTELESVKQRLTQLDELSKQYTEYQALFNLTPFKYLNLQATQEYFATVESLWTAVEKWNELYSNAMTSPFVEVNAEDLSKDVAVAFKDAYALHKKLSNDVTAVLKDRTAEFKLKM 987
BLAST of mRNA_C-tenellus_contig1104.2.1 vs. uniprot
Match: A0A3F2RXH9_9STRA (Bromo domain-containing protein n=8 Tax=Peronosporaceae TaxID=4777 RepID=A0A3F2RXH9_9STRA) HSP 1 Score: 181 bits (459), Expect = 5.380e-49 Identity = 96/210 (45.71%), Postives = 138/210 (65.71%), Query Frame = 2 Query: 2 RNTQVVEQMYSLLSHYDFKVPSEDMVQVDDLRTIQTQYQGEMDAAREENEEKMPDMVRDLDTNIARLNDQLVQLGAQLDEGVFTDAVHFSNPGPVLAELEKVKAKLDQVEGLEKQYSAYQALFGITVYSYKNLVKTQEKFDQMNGLWQMVNRWNEKYESWMNDSFVSLNAEEMNTEVQVFVKDSFAAHKKMNCDVTGRLKEVTQDFKAKM 631 +NT VV+++Y LL Y ++ SEDMVQ+DDLR++Q Y+ E +A ++ +M + LD NI RL++Q++QL QL G+F D+ HF +P V ELE VK +L Q++ L KQY+ YQALF +T + Y NL TQE F + LW V +WNE Y + M FV +NAE+++ +V V KD++A HKK++ DVT LK+ T +FK KM Sbjct: 864 KNTNVVDELYRLLGTYGVRISSEDMVQLDDLRSVQESYKEETEAVDAFVASRVGEMTQQLDANIQRLDEQVLQLHNQLQVGLFIDSSHFEDPSLVKTELESVKQRLTQLDELSKQYTEYQALFNLTPFKYLNLQATQEYFATVESLWTAVEKWNELYSNAMTSPFVEVNAEDLSKDVAVAFKDAYALHKKLSNDVTAVLKDRTAEFKLKM 1073
BLAST of mRNA_C-tenellus_contig1104.2.1 vs. uniprot
Match: A0A485KXX8_9STRA (Aste57867_13359 protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485KXX8_9STRA) HSP 1 Score: 180 bits (456), Expect = 1.360e-48 Identity = 96/210 (45.71%), Postives = 137/210 (65.24%), Query Frame = 2 Query: 2 RNTQVVEQMYSLLSHYDFKVPSEDMVQVDDLRTIQTQYQGEMDAAREENEEKMPDMVRDLDTNIARLNDQLVQLGAQLDEGVFTDAVHFSNPGPVLAELEKVKAKLDQVEGLEKQYSAYQALFGITVYSYKNLVKTQEKFDQMNGLWQMVNRWNEKYESWMNDSFVSLNAEEMNTEVQVFVKDSFAAHKKMNCDVTGRLKEVTQDFKAKM 631 +NT VV++MY LLS+Y ++ SEDMVQ+DDLR +Q Y+ E DA + K+ +M + LD+NIARL++Q VQL QL GVF DA +F + G VL EL+ +K +L +E + KQYS YQALF I Y+Y NL T + F+ + LW V RWN + +++ F +N EE+ +V V KD++A HKK++ DVT LK+ +FK K+ Sbjct: 735 KNTNVVDEMYRLLSNYGVRISSEDMVQLDDLRGVQESYKEETDAVELFIQGKLGEMTQQLDSNIARLDEQTVQLNEQLQTGVFIDAANFDDTGVVLGELDTIKQRLTTLEEMSKQYSEYQALFNIDTYNYINLTTTMDYFNTVETLWTSVERWNAQQSHVLHNPFADVNVEELAKDVAVAFKDAYAMHKKLSNDVTALLKDKAAEFKLKI 944
BLAST of mRNA_C-tenellus_contig1104.2.1 vs. uniprot
Match: A0A3R7A1S0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7A1S0_9STRA) HSP 1 Score: 178 bits (452), Expect = 4.550e-48 Identity = 94/210 (44.76%), Postives = 137/210 (65.24%), Query Frame = 2 Query: 2 RNTQVVEQMYSLLSHYDFKVPSEDMVQVDDLRTIQTQYQGEMDAAREENEEKMPDMVRDLDTNIARLNDQLVQLGAQLDEGVFTDAVHFSNPGPVLAELEKVKAKLDQVEGLEKQYSAYQALFGITVYSYKNLVKTQEKFDQMNGLWQMVNRWNEKYESWMNDSFVSLNAEEMNTEVQVFVKDSFAAHKKMNCDVTGRLKEVTQDFKAKM 631 +NT VV++MY LL +Y ++ SEDMVQ+DDLR++Q Y+ E DA K+ +M + LD+NIARL++Q VQL QL G F DA +F G VL EL+ VK +L Q+E L KQYS YQ LF I Y+Y NL T + ++ + LW V++WN++ + +++ FV + EE+ +V V KD++A HKK++ DVT LK+ +FK K+ Sbjct: 705 KNTNVVDEMYRLLGNYGVRISSEDMVQLDDLRSVQESYKEETDAVDVYIHGKLSEMTQQLDSNIARLDEQTVQLNEQLQTGAFIDATNFDETGIVLGELDVVKQRLGQLEELSKQYSEYQTLFNIDPYNYVNLTTTMDYYNTVEALWTAVDKWNDQQRNVLHNPFVDIQVEELAKDVAVAFKDAYAMHKKLSNDVTALLKDKAAEFKLKI 914
BLAST of mRNA_C-tenellus_contig1104.2.1 vs. uniprot
Match: A0A024U9I2_9STRA (Uncharacterized protein n=15 Tax=Aphanomyces TaxID=100860 RepID=A0A024U9I2_9STRA) HSP 1 Score: 178 bits (451), Expect = 6.370e-48 Identity = 95/210 (45.24%), Postives = 136/210 (64.76%), Query Frame = 2 Query: 2 RNTQVVEQMYSLLSHYDFKVPSEDMVQVDDLRTIQTQYQGEMDAAREENEEKMPDMVRDLDTNIARLNDQLVQLGAQLDEGVFTDAVHFSNPGPVLAELEKVKAKLDQVEGLEKQYSAYQALFGITVYSYKNLVKTQEKFDQMNGLWQMVNRWNEKYESWMNDSFVSLNAEEMNTEVQVFVKDSFAAHKKMNCDVTGRLKEVTQDFKAKM 631 +NT VV++MY LLS+Y ++ SEDMVQ+DDLR++Q Y+ E DA + K+ +M + LD+NIARL++Q VQL QL GVF D +F VL EL+ VK +L Q+E L KQYS YQ LF I Y+Y NL T + ++ + LW V +WNE+ +++ FV + EE+ +V V KD++A HKK++ DVT LK+ +FK K+ Sbjct: 708 KNTNVVDEMYRLLSNYGVRISSEDMVQLDDLRSVQESYKEETDAVEVFIQSKLSEMTQQLDSNIARLDEQTVQLNEQLQTGVFIDVTNFDETNIVLGELDVVKQRLAQLEELSKQYSEYQTLFNIDPYNYINLTTTMDYYNTVETLWTAVEKWNEQQRHVLHNPFVDIQVEELAKDVAVAFKDAYAMHKKLSNDVTALLKDKAAEFKLKI 917
BLAST of mRNA_C-tenellus_contig1104.2.1 vs. uniprot
Match: A0A5D6XHL3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XHL3_9STRA) HSP 1 Score: 177 bits (448), Expect = 1.600e-47 Identity = 94/210 (44.76%), Postives = 132/210 (62.86%), Query Frame = 2 Query: 2 RNTQVVEQMYSLLSHYDFKVPSEDMVQVDDLRTIQTQYQGEMDAAREENEEKMPDMVRDLDTNIARLNDQLVQLGAQLDEGVFTDAVHFSNPGPVLAELEKVKAKLDQVEGLEKQYSAYQALFGITVYSYKNLVKTQEKFDQMNGLWQMVNRWNEKYESWMNDSFVSLNAEEMNTEVQVFVKDSFAAHKKMNCDVTGRLKEVTQDFKAKM 631 +NT VV+++Y LL HY ++ SEDMVQ+DDLR++Q Y+ E DA + ++ DM + L+ NI RL++Q++QL QL G+F D F +P V +ELE K +L Q++ L KQYS YQ LF + Y NL TQE F + LW V WN Y + + +FV +NAEE+ +V KD++A HKK++ DVT LK+ T DFK KM Sbjct: 786 KNTNVVDELYRLLGHYGVRITSEDMVQLDDLRSVQESYRDETDAVDAFVQARVGDMAQQLEANIQRLDEQVLQLHGQLQTGLFVDPEQFEDPALVKSELEAAKQRLAQLDELAKQYSEYQVLFSQPPFQYANLTATQEFFATVEALWAAVETWNSTYRTALTSAFVDVNAEELAKDVAAAFKDAYALHKKLSNDVTAALKDRTADFKLKM 995 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1104.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig1104.2.1 >prot_C-tenellus_contig1104.2.1 ID=prot_C-tenellus_contig1104.2.1|Name=mRNA_C-tenellus_contig1104.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=202bp MYSLLSHYDFKVPSEDMVQVDDLRTIQTQYQGEMDAAREENEEKMPDMVRback to top mRNA from alignment at C-tenellus_contig1104:9134..11411+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig1104.2.1 ID=mRNA_C-tenellus_contig1104.2.1|Name=mRNA_C-tenellus_contig1104.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2278bp|location=Sequence derived from alignment at C-tenellus_contig1104:9134..11411+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig1104:9134..11411+ >mRNA_C-tenellus_contig1104.2.1 ID=mRNA_C-tenellus_contig1104.2.1|Name=mRNA_C-tenellus_contig1104.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=606bp|location=Sequence derived from alignment at C-tenellus_contig1104:9134..11411+ (Choristocarpus tenellus KU2346)back to top |