mRNA_C-tenellus_contig11002.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig11002.1.1 vs. uniprot
Match: A0A7S4BH91_CHRCT (Glycine hydroxymethyltransferase n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BH91_CHRCT) HSP 1 Score: 259 bits (663), Expect = 3.580e-85 Identity = 115/150 (76.67%), Postives = 133/150 (88.67%), Query Frame = 1 Query: 1 RYSEGLPGRRYYGGNEHIDRMERLCQERALKAFRLDPEEWAVNVQPYSGSPANFAVYTALLKPHDRIMGLDLPSGGHLTHGYYNAKKKVSATSIYFESLPYEVDAETGLIDYEGLERMAKAFRPRLIIAGASAYPRDWDYARMRQVKNKI 450 +YSEG+PG RYYGGNEH+D +ERLCQ RAL + L P+EW VNVQPYSGSPANFA YTALL+PHDR+MGLDLPSGGHLTHGYYN +++VSATSIYFESLPYEVDA TGLIDY+ LE AK FRP+L+IAGASAYPRDWDYARMR++ + + Sbjct: 111 KYSEGMPGARYYGGNEHVDTLERLCQSRALALYGLSPDEWGVNVQPYSGSPANFAAYTALLQPHDRVMGLDLPSGGHLTHGYYNERRRVSATSIYFESLPYEVDASTGLIDYDALEARAKLFRPKLLIAGASAYPRDWDYARMREIADSV 260
BLAST of mRNA_C-tenellus_contig11002.1.1 vs. uniprot
Match: R1DZ60_EMIHU (Serine hydroxymethyltransferase n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DZ60_EMIHU) HSP 1 Score: 264 bits (674), Expect = 2.870e-84 Identity = 118/150 (78.67%), Postives = 136/150 (90.67%), Query Frame = 1 Query: 1 RYSEGLPGRRYYGGNEHIDRMERLCQERALKAFRLDPEEWAVNVQPYSGSPANFAVYTALLKPHDRIMGLDLPSGGHLTHGYYNAKKKVSATSIYFESLPYEVDAETGLIDYEGLERMAKAFRPRLIIAGASAYPRDWDYARMRQVKNKI 450 +YSEGLPG RYYGGNEH+D +ERLCQ RAL+ F LDP+EW VNVQPYSGSPANFA +TALL+PHDRIMGLDLPSGGHLTHGYYN +++VSATSIYFESLPYEV AETGLIDY+GLE A+ FRP+L+IAGASAYPRDWDYARMR++ + + Sbjct: 93 KYSEGLPGARYYGGNEHVDALERLCQARALELFGLDPDEWGVNVQPYSGSPANFAAFTALLEPHDRIMGLDLPSGGHLTHGYYNERRRVSATSIYFESLPYEVSAETGLIDYDGLEERARLFRPKLLIAGASAYPRDWDYARMRRIADSV 242
BLAST of mRNA_C-tenellus_contig11002.1.1 vs. uniprot
Match: A0A0M0JHA8_9EUKA (Serine hydroxymethyltransferase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JHA8_9EUKA) HSP 1 Score: 263 bits (673), Expect = 3.010e-84 Identity = 119/150 (79.33%), Postives = 135/150 (90.00%), Query Frame = 1 Query: 1 RYSEGLPGRRYYGGNEHIDRMERLCQERALKAFRLDPEEWAVNVQPYSGSPANFAVYTALLKPHDRIMGLDLPSGGHLTHGYYNAKKKVSATSIYFESLPYEVDAETGLIDYEGLERMAKAFRPRLIIAGASAYPRDWDYARMRQVKNKI 450 +YSEGLPG RYYGGNEHID +ERLCQ+RAL + L P+EW VNVQPYSGSPANFA YTALL+PHDRIMGLDLPSGGHLTHGYY+ KKK+SATSIYFESLPYEVDA TGL+DY+GLE A+ FRP+LIIAGASAYPRDWDY RMRQ+ +++ Sbjct: 84 KYSEGLPGARYYGGNEHIDAIERLCQKRALDLYGLSPDEWGVNVQPYSGSPANFAAYTALLQPHDRIMGLDLPSGGHLTHGYYSPKKKISATSIYFESLPYEVDATTGLVDYDGLEARARLFRPKLIIAGASAYPRDWDYGRMRQIADEV 233
BLAST of mRNA_C-tenellus_contig11002.1.1 vs. uniprot
Match: A0A836CDU7_9STRA (Serine hydroxymethyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDU7_9STRA) HSP 1 Score: 263 bits (672), Expect = 1.410e-83 Identity = 120/150 (80.00%), Postives = 135/150 (90.00%), Query Frame = 1 Query: 1 RYSEGLPGRRYYGGNEHIDRMERLCQERALKAFRLDPEEWAVNVQPYSGSPANFAVYTALLKPHDRIMGLDLPSGGHLTHGYYNAKKKVSATSIYFESLPYEVDAETGLIDYEGLERMAKAFRPRLIIAGASAYPRDWDYARMRQVKNKI 450 +YSEGLPG RYYGGNE ID+MERLCQ RAL+ + LDP EW VNVQPYSGSPANFAVYTALL+PHDRIMGLDLPSGGHLTHGYY+AKKK+SATSIYFESLPYEVDA TGL+DY+ + R AK FRP+L+IAGASAY RDWDYARMRQ+ + + Sbjct: 123 KYSEGLPGARYYGGNEQIDKMERLCQARALQTYNLDPSEWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGYYSAKKKISATSIYFESLPYEVDATTGLLDYDEMARRAKLFRPKLLIAGASAYSRDWDYARMRQIADDV 272
BLAST of mRNA_C-tenellus_contig11002.1.1 vs. uniprot
Match: A0A7S4BH98_CHRCT (Serine hydroxymethyltransferase n=3 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BH98_CHRCT) HSP 1 Score: 259 bits (663), Expect = 1.970e-82 Identity = 115/150 (76.67%), Postives = 133/150 (88.67%), Query Frame = 1 Query: 1 RYSEGLPGRRYYGGNEHIDRMERLCQERALKAFRLDPEEWAVNVQPYSGSPANFAVYTALLKPHDRIMGLDLPSGGHLTHGYYNAKKKVSATSIYFESLPYEVDAETGLIDYEGLERMAKAFRPRLIIAGASAYPRDWDYARMRQVKNKI 450 +YSEG+PG RYYGGNEH+D +ERLCQ RAL + L P+EW VNVQPYSGSPANFA YTALL+PHDR+MGLDLPSGGHLTHGYYN +++VSATSIYFESLPYEVDA TGLIDY+ LE AK FRP+L+IAGASAYPRDWDYARMR++ + + Sbjct: 111 KYSEGMPGARYYGGNEHVDTLERLCQSRALALYGLSPDEWGVNVQPYSGSPANFAAYTALLQPHDRVMGLDLPSGGHLTHGYYNERRRVSATSIYFESLPYEVDASTGLIDYDALEARAKLFRPKLLIAGASAYPRDWDYARMREIADSV 260
BLAST of mRNA_C-tenellus_contig11002.1.1 vs. uniprot
Match: A0A7S0H3N8_9EUKA (Serine hydroxymethyltransferase (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H3N8_9EUKA) HSP 1 Score: 249 bits (637), Expect = 6.370e-81 Identity = 113/150 (75.33%), Postives = 130/150 (86.67%), Query Frame = 1 Query: 1 RYSEGLPGRRYYGGNEHIDRMERLCQERALKAFRLDPEEWAVNVQPYSGSPANFAVYTALLKPHDRIMGLDLPSGGHLTHGYYNAKKKVSATSIYFESLPYEVDAETGLIDYEGLERMAKAFRPRLIIAGASAYPRDWDYARMRQVKNKI 450 +YSEGLPG+RYYGGNE ID+ ERLCQ RALKAF +D +EW VNVQPYSGSPANFAV+TALLKPHDRIMGLDLPSGGHLTHG+Y KKK+SATSI+FESLPY VD ETGLIDY+ LE AK F P++II GASAYPRDWDY ++R + + + Sbjct: 58 KYSEGLPGKRYYGGNEFIDQAERLCQSRALKAFHVDAKEWGVNVQPYSGSPANFAVFTALLKPHDRIMGLDLPSGGHLTHGFYTPKKKISATSIFFESLPYRVDGETGLIDYKALEAQAKLFIPKIIICGASAYPRDWDYKKLRGIADSV 207
BLAST of mRNA_C-tenellus_contig11002.1.1 vs. uniprot
Match: A0A7S0J5B3_9EUKA (Serine hydroxymethyltransferase n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J5B3_9EUKA) HSP 1 Score: 254 bits (650), Expect = 2.400e-80 Identity = 115/150 (76.67%), Postives = 131/150 (87.33%), Query Frame = 1 Query: 1 RYSEGLPGRRYYGGNEHIDRMERLCQERALKAFRLDPEEWAVNVQPYSGSPANFAVYTALLKPHDRIMGLDLPSGGHLTHGYYNAKKKVSATSIYFESLPYEVDAETGLIDYEGLERMAKAFRPRLIIAGASAYPRDWDYARMRQVKNKI 450 +YSEG+PG RYYGGNE ID +ERLCQ RAL F LDP+EW VNVQPYSGSPANFA +TALL+PHDR+MGLDLPSGGHLTHGYYN K++VSATSIYFESLPYEV +TGLIDY+ L+ AK FRPRL+IAGASAYPRDWDY RMRQ+ + + Sbjct: 123 KYSEGMPGARYYGGNEVIDEVERLCQSRALNLFGLDPDEWGVNVQPYSGSPANFAAFTALLQPHDRVMGLDLPSGGHLTHGYYNNKRRVSATSIYFESLPYEVTPDTGLIDYDALQERAKLFRPRLLIAGASAYPRDWDYERMRQIADSV 272
BLAST of mRNA_C-tenellus_contig11002.1.1 vs. uniprot
Match: A0A7S4F1F3_CHRCT (Serine hydroxymethyltransferase n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F1F3_CHRCT) HSP 1 Score: 249 bits (637), Expect = 2.780e-80 Identity = 110/146 (75.34%), Postives = 131/146 (89.73%), Query Frame = 1 Query: 1 RYSEGLPGRRYYGGNEHIDRMERLCQERALKAFRLDPEEWAVNVQPYSGSPANFAVYTALLKPHDRIMGLDLPSGGHLTHGYYNAKKKVSATSIYFESLPYEVDAETGLIDYEGLERMAKAFRPRLIIAGASAYPRDWDYARMRQV 438 +YSEG+PG RYYGGNE +D++E +C++RAL AF LD + W VNVQPYSGSPANFAVYTALL PHDR+MGLDLPSGGHLTHGYY AKKK+SATSIYFESLPY VD+ETG++DY+ +E+ A FRP++IIAGASAYPRDWDYARMR++ Sbjct: 65 KYSEGMPGARYYGGNEFVDQVENICRDRALTAFGLDSKGWGVNVQPYSGSPANFAVYTALLNPHDRVMGLDLPSGGHLTHGYYTAKKKISATSIYFESLPYHVDSETGIVDYDHMEKTAMVFRPKMIIAGASAYPRDWDYARMRKI 210
BLAST of mRNA_C-tenellus_contig11002.1.1 vs. uniprot
Match: A0A7S3HXE4_9SPIT (Serine hydroxymethyltransferase n=1 Tax=Favella ehrenbergii TaxID=182087 RepID=A0A7S3HXE4_9SPIT) HSP 1 Score: 251 bits (642), Expect = 4.290e-80 Identity = 114/150 (76.00%), Postives = 132/150 (88.00%), Query Frame = 1 Query: 1 RYSEGLPGRRYYGGNEHIDRMERLCQERALKAFRLDPEEWAVNVQPYSGSPANFAVYTALLKPHDRIMGLDLPSGGHLTHGYYNAKKKVSATSIYFESLPYEVDAETGLIDYEGLERMAKAFRPRLIIAGASAYPRDWDYARMRQVKNKI 450 +YSEG+PG RYYGGN+ ID++E LC+ RALKAF LD +W VNVQPYSGSPANFAVYTALL PHDR+MGLDLPSGGHLTHGYY AKKK+SATSIYFESLPY VD+ TGLIDY+ LE+ A +RP++IIAGASAYPRDWDYARMR + +K+ Sbjct: 24 KYSEGMPGARYYGGNQIIDQVENLCRARALKAFNLDAAKWGVNVQPYSGSPANFAVYTALLNPHDRVMGLDLPSGGHLTHGYYTAKKKISATSIYFESLPYHVDSLTGLIDYDDLEKQALVYRPKMIIAGASAYPRDWDYARMRSICDKV 173
BLAST of mRNA_C-tenellus_contig11002.1.1 vs. uniprot
Match: R1DPF5_EMIHU (Serine hydroxymethyltransferase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DPF5_EMIHU) HSP 1 Score: 251 bits (642), Expect = 1.000e-79 Identity = 114/149 (76.51%), Postives = 131/149 (87.92%), Query Frame = 1 Query: 1 RYSEGLPGRRYYGGNEHIDRMERLCQERALKAFRLDPEEWAVNVQPYSGSPANFAVYTALLKPHDRIMGLDLPSGGHLTHGYYNAKKKVSATSIYFESLPYEVDAETGLIDYEGLERMAKAFRPRLIIAGASAYPRDWDYARMRQVKNK 447 +YSEG+PG RYYGGN+ ID++E LC+ RAL AF DP +W VNVQPYSGSPANFAVYTALL PHDR+MGLDLPSGGHLTHGYY AKKK+SATSIYFESLPY VD++TGLIDY+ LE+ A FRP++IIAGASAYPRDWDYARMR + +K Sbjct: 55 KYSEGMPGARYYGGNQIIDQVENLCRSRALAAFNCDPAKWGVNVQPYSGSPANFAVYTALLTPHDRVMGLDLPSGGHLTHGYYTAKKKISATSIYFESLPYHVDSQTGLIDYDHLEKTAMVFRPKMIIAGASAYPRDWDYARMRDICDK 203 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11002.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig11002.1.1 >prot_C-tenellus_contig11002.1.1 ID=prot_C-tenellus_contig11002.1.1|Name=mRNA_C-tenellus_contig11002.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=150bp RYSEGLPGRRYYGGNEHIDRMERLCQERALKAFRLDPEEWAVNVQPYSGSback to top mRNA from alignment at C-tenellus_contig11002:584..5388- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig11002.1.1 ID=mRNA_C-tenellus_contig11002.1.1|Name=mRNA_C-tenellus_contig11002.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4805bp|location=Sequence derived from alignment at C-tenellus_contig11002:584..5388- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig11002:584..5388- >mRNA_C-tenellus_contig11002.1.1 ID=mRNA_C-tenellus_contig11002.1.1|Name=mRNA_C-tenellus_contig11002.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=450bp|location=Sequence derived from alignment at C-tenellus_contig11002:584..5388- (Choristocarpus tenellus KU2346)back to top |