mRNA_C-tenellus_contig11000.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig11000.2.1 vs. uniprot
Match: D7FZP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZP1_ECTSI) HSP 1 Score: 90.9 bits (224), Expect = 5.170e-20 Identity = 39/55 (70.91%), Postives = 47/55 (85.45%), Query Frame = 1 Query: 1 VVERARQEVGDEKGQLQAACYAIRFAGSVVGCLGGALLYNADEWGWGLSFQQVCL 165 VVERAR E + +GQ+QA CYAIRFAG+V+GCLGGALL+N WGWGL+F+QVCL Sbjct: 212 VVERARGEAEESRGQMQATCYAIRFAGNVIGCLGGALLFNRGAWGWGLTFRQVCL 266
BLAST of mRNA_C-tenellus_contig11000.2.1 vs. uniprot
Match: A0A836CBB7_9STRA (Folate-biopterin transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBB7_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 1.560e-18 Identity = 38/55 (69.09%), Postives = 47/55 (85.45%), Query Frame = 1 Query: 1 VVERARQEVGDEKGQLQAACYAIRFAGSVVGCLGGALLYNADEWGWGLSFQQVCL 165 VVERAR E +++GQLQA CYA+RF GSV+GCL GA++YN +WGWGLSF+QVCL Sbjct: 163 VVERARLEDTEQRGQLQATCYAVRFMGSVLGCLMGAVVYNQVQWGWGLSFRQVCL 217
BLAST of mRNA_C-tenellus_contig11000.2.1 vs. uniprot
Match: A0A7S2XY88_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY88_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 2.140e-18 Identity = 38/55 (69.09%), Postives = 41/55 (74.55%), Query Frame = 1 Query: 1 VVERARQEVGDEKGQLQAACYAIRFAGSVVGCLGGALLYNADEWGWGLSFQQVCL 165 VVER R E KGQ QA CYA+RF GSV GCLGG LLYN+ WGWGL+F QVCL Sbjct: 171 VVERGRTEEEGSKGQAQATCYAVRFGGSVAGCLGGTLLYNSTNWGWGLTFPQVCL 225
BLAST of mRNA_C-tenellus_contig11000.2.1 vs. uniprot
Match: D7G1P4_ECTSI (Biopterin transport-related protein BT1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1P4_ECTSI) HSP 1 Score: 66.6 bits (161), Expect = 1.820e-11 Identity = 28/53 (52.83%), Postives = 39/53 (73.58%), Query Frame = 1 Query: 1 VVERARQEVGDEKGQLQAACYAIRFAGSVVGCLGGALLYNADEWGWGLSFQQV 159 +VER++ E + +G +QA Y++RF GS++G G LLYN DEWGWGLS QQ+ Sbjct: 193 LVERSKHEPAETRGSMQAIGYSVRFVGSLLGSTMGLLLYNKDEWGWGLSIQQL 245
BLAST of mRNA_C-tenellus_contig11000.2.1 vs. uniprot
Match: A0A6V1WMI5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WMI5_HETAK) HSP 1 Score: 65.1 bits (157), Expect = 6.350e-11 Identity = 29/53 (54.72%), Postives = 38/53 (71.70%), Query Frame = 1 Query: 1 VVERARQEVGDEKGQLQAACYAIRFAGSVVGCLGGALLYNADEWGWGLSFQQV 159 VVER++ E DE+G +QA Y IRF GS++G GA+LYN D WGWGL+ Q+ Sbjct: 183 VVERSQHESDDERGTIQAQGYIIRFVGSILGSAMGAVLYNRDTWGWGLTTPQM 235
BLAST of mRNA_C-tenellus_contig11000.2.1 vs. uniprot
Match: A0A7S3GWJ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GWJ9_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 1.050e-10 Identity = 28/52 (53.85%), Postives = 40/52 (76.92%), Query Frame = 1 Query: 4 VERARQEVGDEKGQLQAACYAIRFAGSVVGCLGGALLYNADEWGWGLSFQQV 159 V+R+R E D++GQ+QA+ Y++RFAG V+G + GA + N D WG GL+FQQV Sbjct: 157 VQRSRFEKEDQRGQMQASFYSVRFAGGVIGAICGASVCNKDTWGVGLTFQQV 208
BLAST of mRNA_C-tenellus_contig11000.2.1 vs. uniprot
Match: D8LI15_ECTSI (Folate/biopterin transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI15_ECTSI) HSP 1 Score: 59.3 bits (142), Expect = 6.920e-9 Identity = 24/53 (45.28%), Postives = 36/53 (67.92%), Query Frame = 1 Query: 1 VVERARQEVGDEKGQLQAACYAIRFAGSVVGCLGGALLYNADEWGWGLSFQQV 159 VVE+ ++E G +QA+ Y R+ GS +G +GGA+LYN D WGWGL+ ++ Sbjct: 245 VVEKTQRESMSNMGNIQASGYIARYFGSAIGAVGGAVLYNKDTWGWGLTISEL 297 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig11000.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig11000.2.1 >prot_C-tenellus_contig11000.2.1 ID=prot_C-tenellus_contig11000.2.1|Name=mRNA_C-tenellus_contig11000.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=55bp VVERARQEVGDEKGQLQAACYAIRFAGSVVGCLGGALLYNADEWGWGLSFback to top mRNA from alignment at C-tenellus_contig11000:5101..5265- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig11000.2.1 ID=mRNA_C-tenellus_contig11000.2.1|Name=mRNA_C-tenellus_contig11000.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=165bp|location=Sequence derived from alignment at C-tenellus_contig11000:5101..5265- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig11000:5101..5265- >mRNA_C-tenellus_contig11000.2.1 ID=mRNA_C-tenellus_contig11000.2.1|Name=mRNA_C-tenellus_contig11000.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=165bp|location=Sequence derived from alignment at C-tenellus_contig11000:5101..5265- (Choristocarpus tenellus KU2346)back to top |