mRNA_C-tenellus_contig10990.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10990.2.1 vs. uniprot
Match: D8LRQ6_ECTSI (Methyltransferase type 12 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRQ6_ECTSI) HSP 1 Score: 80.9 bits (198), Expect = 4.300e-17 Identity = 36/49 (73.47%), Postives = 43/49 (87.76%), Query Frame = 1 Query: 4 LAAKSQEGNEMVAQLVKSLGSALVYADPGNFETNRKLWNNYAAEWDPEA 150 L KS+ GNEMV+ LV+SLGSALVY D GNF+TNRKLW+NYAAEW+P+A Sbjct: 8 LTEKSKAGNEMVSNLVQSLGSALVYPDAGNFDTNRKLWDNYAAEWEPDA 56
BLAST of mRNA_C-tenellus_contig10990.2.1 vs. uniprot
Match: A0A7S2SUS9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUS9_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 1.680e-11 Identity = 28/43 (65.12%), Postives = 35/43 (81.40%), Query Frame = 1 Query: 16 SQEGNEMVAQLVKSLGSALVYADPGNFETNRKLWNNYAAEWDP 144 +QEG+ MV +L+KSL A+VY D GNF+TNRKLW+ YA EWDP Sbjct: 20 AQEGSPMVLELLKSLNQAVVYPDAGNFDTNRKLWDLYAGEWDP 62
BLAST of mRNA_C-tenellus_contig10990.2.1 vs. uniprot
Match: A0A0G4GCV4_9ALVE (Uncharacterized protein (Fragment) n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GCV4_9ALVE) HSP 1 Score: 62.0 bits (149), Expect = 1.800e-11 Identity = 27/44 (61.36%), Postives = 33/44 (75.00%), Query Frame = 1 Query: 13 KSQEGNEMVAQLVKSLGSALVYADPGNFETNRKLWNNYAAEWDP 144 KS++ + V LV+SLGSALVY + N ETNRKLWN YA +WDP Sbjct: 16 KSEDKSSAVLDLVRSLGSALVYPESTNIETNRKLWNQYAKQWDP 59
BLAST of mRNA_C-tenellus_contig10990.2.1 vs. uniprot
Match: A0A0G4GG79_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GG79_VITBC) HSP 1 Score: 60.5 bits (145), Expect = 2.290e-9 Identity = 25/41 (60.98%), Postives = 32/41 (78.05%), Query Frame = 1 Query: 25 GNEMVAQLVKSLGSALVYADPGNFETNRKLWNNYAAEWDPE 147 GN ++ QLV++L SA+VY+D GNFETN+KLWN YA W E Sbjct: 22 GNPLLVQLVQTLNSAVVYSDAGNFETNKKLWNEYAKSWRAE 62
BLAST of mRNA_C-tenellus_contig10990.2.1 vs. uniprot
Match: A0A835Z8T5_9STRA (Methyltransferase type 12 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8T5_9STRA) HSP 1 Score: 55.5 bits (132), Expect = 1.300e-7 Identity = 27/51 (52.94%), Postives = 37/51 (72.55%), Query Frame = 1 Query: 4 LAAKSQ-EGNEMVAQLVKSLGSALVY-ADPGNFETNRKLWNNYAAEWDPEA 150 LA ++Q + M+A L+KSLG A+VY D GN +TNRKLW+ YA+EW +A Sbjct: 8 LAERAQASASPMIANLIKSLGQAIVYYPDAGNLDTNRKLWDAYASEWSQDA 58
BLAST of mRNA_C-tenellus_contig10990.2.1 vs. uniprot
Match: A0A7S3UJ34_OXYMA (Hypothetical protein (Fragment) n=1 Tax=Oxyrrhis marina TaxID=2969 RepID=A0A7S3UJ34_OXYMA) HSP 1 Score: 51.2 bits (121), Expect = 8.420e-7 Identity = 24/43 (55.81%), Postives = 27/43 (62.79%), Query Frame = 1 Query: 22 EGNEMVAQLVKSLGSALVYADPGNFETNRKLWNNYAAEWDPEA 150 E VA LV +L A+VY D N TNRKLW+ YAA WDP A Sbjct: 11 ESQPSVAGLVDALAPAMVYTDAPNAVTNRKLWDAYAAAWDPSA 53
BLAST of mRNA_C-tenellus_contig10990.2.1 vs. uniprot
Match: A0A7S3XH85_OXYMA (Hypothetical protein (Fragment) n=1 Tax=Oxyrrhis marina TaxID=2969 RepID=A0A7S3XH85_OXYMA) HSP 1 Score: 51.2 bits (121), Expect = 1.860e-6 Identity = 24/43 (55.81%), Postives = 27/43 (62.79%), Query Frame = 1 Query: 22 EGNEMVAQLVKSLGSALVYADPGNFETNRKLWNNYAAEWDPEA 150 E VA LV +L A+VY D N TNRKLW+ YAA WDP A Sbjct: 11 ESQPSVAGLVDALAPAMVYTDAPNAVTNRKLWDAYAAAWDPSA 53 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10990.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10990.2.1 >prot_C-tenellus_contig10990.2.1 ID=prot_C-tenellus_contig10990.2.1|Name=mRNA_C-tenellus_contig10990.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=52bp MLAAKSQEGNEMVAQLVKSLGSALVYADPGNFETNRKLWNNYAAEWDPEAback to top mRNA from alignment at C-tenellus_contig10990:3379..3534- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10990.2.1 ID=mRNA_C-tenellus_contig10990.2.1|Name=mRNA_C-tenellus_contig10990.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=156bp|location=Sequence derived from alignment at C-tenellus_contig10990:3379..3534- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10990:3379..3534- >mRNA_C-tenellus_contig10990.2.1 ID=mRNA_C-tenellus_contig10990.2.1|Name=mRNA_C-tenellus_contig10990.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=156bp|location=Sequence derived from alignment at C-tenellus_contig10990:3379..3534- (Choristocarpus tenellus KU2346)back to top |