mRNA_C-tenellus_contig1096.5.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig1096.5.1
Unique NamemRNA_C-tenellus_contig1096.5.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig1096.5.1 vs. uniprot
Match: D8LGK4_ECTSI (alpha-1,2-Mannosidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGK4_ECTSI)

HSP 1 Score: 645 bits (1665), Expect = 1.420e-219
Identity = 314/461 (68.11%), Postives = 376/461 (81.56%), Query Frame = 3
Query:   42 GTYSFRY--EVVGYDTDLRDGLTNTQVTTEMREESDRIGRERAAKVKAAMQHVWTNYRQYAWGWDELAPRTKKGKNPWGSMGVTLVDSLDTLWLMGMKDEFWEARDWVRDKLTFDKANSVSVFETTIRELGGLLSAYDLSGDKTFLTKAQMLGDKLLPAFNTNSGLPTSHVNFKSG-TARRSQSVLAEIGTLQVEFRYLSHATGDPKYANKVNHVFEHLAQIGGNHGLYPIYFSPTNGRSTTTQVTLGALGDSFYEYLLKVWLQGGKTESTYRDMYDRAMDGVAEVLIKKSNPSGMTFVSDWNGSRNINKMDHLVCFLAGSLALGSTTHEDPEKAERDLRLAKALAFTCYNMYSRQKTGLAPEMVNFRDGQDMVVPGNAGYYKLRPETAESLFILHQITGDPIYREWSWSIFQAIEKHCKTPNGYGSHPDVNNPSARAEDNLESFFLAETLKYLFLIQDPD 1415
            GTY F +  E    D +L+DG++    T + +EESDR GRERAAKVK AMQH W  Y Q+AWG DELAPR KKGK PWG MGVTLVDSLDTLWLMGMK+EF+ ARDWV+DKLTF  A+ VSVFETTIRELGGLLSAYDLS D+ F TKA  L D LLPAF+TN+G+PT+ V+F+S   +  S+SVLAEIGTLQVEFRYLS  TG PKYA+KVN VF+H+  +    GLYPI+ +P+NG++  +QVT GALGDSFYEYLLK WLQGGKTE+ YR MYDRAMDG+   L++KS+PSG+T+VSD +GS+N++KMDHLVCFLAG+LALGS T +DP +A+RDL+ AKALA+TCY MY RQKTGLAPEMV F  G+DMVVP  A Y  LRPETAE+L++LHQITGDPIYR+WSW+IFQA EKHC+ P  +GS P+VN+P+ + ED +ESFFLAETLKYL+LIQDPD
Sbjct:  397 GTYHFMHMQEPPKVDQNLKDGISAHDATPQSKEESDRKGRERAAKVKEAMQHAWKGYEQHAWGADELAPRAKKGKQPWGGMGVTLVDSLDTLWLMGMKEEFYRARDWVKDKLTFSHASEVSVFETTIRELGGLLSAYDLSKDEIFKTKAIELADLLLPAFDTNTGIPTARVSFRSHKNSGGSKSVLAEIGTLQVEFRYLSKITGIPKYADKVNKVFDHMYGLPSKDGLYPIFVNPSNGQTVGSQVTFGALGDSFYEYLLKAWLQGGKTETKYRTMYDRAMDGMTSKLLRKSDPSGLTYVSDLSGSKNVDKMDHLVCFLAGTLALGSKTTDDPVRADRDLKTAKALAYTCYQMYERQKTGLAPEMVTFEKGKDMVVPPKAAYNILRPETAEALYVLHQITGDPIYRDWSWNIFQAFEKHCRLPVAFGSFPNVNDPNRQPEDRMESFFLAETLKYLYLIQDPD 857          
BLAST of mRNA_C-tenellus_contig1096.5.1 vs. uniprot
Match: D7FS40_ECTSI (alpha-1,2-Mannosidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS40_ECTSI)

HSP 1 Score: 575 bits (1483), Expect = 1.160e-194
Identity = 275/477 (57.65%), Postives = 351/477 (73.58%), Query Frame = 3
Query:   81 TDLRDGLTNTQVTTEMREESDRIGRERAAKVKAAMQHVWTNYRQYAWGWDELAPRTKKGKNPWGSMGVTLVDSLDTLWLMGMKDEFWEARDWVRDKLTFDKANSVSVFETTIRELGGLLSAYDLSGDKTFLTKAQMLGDKLLPAFNTNSGLPTSHVNFKSG-TARRSQSVLAEIGTLQVEFRYLSHATGDPKYANKVNHVFEHLAQIGGNHGLYPIYFSPTNGRSTTTQVTLGALGDSFYEYLLKVWLQGGKTESTYRDMYDRAMDGVAEVLIKKSNPSGMTFVSDWNGSRNINKMDHLVCFLAGSLALGSTTHEDPEKAERDLRLAKALAFTCYNMYSRQKTGLAPEMVNFRDGQDMVVPGNAGYYKLRPETAESLFILHQITGDPIYREWSWSIFQAIEKHCKTPNGYGSHPDVNNPSARAEDNLESFFLAETLKYLFLIQDPDHIVDLTKVVFNTEAHPLRIFSET*DLRGSNQ 1508
            T   +GL   +++  MREESDR+GRERAA ++AAM  +W  Y ++AWG+DE+ P +KKG + WG MGVTLVDSLDTLWLMG+ +EF+  RDWVRD LTF++   VSVFETTIR LGGLLSA++LS D+ FL +A+ L D+L+PAF T++G+P   VN  +G T   S SVL+E+GTLQ+EFRYLSH  GD KYA      F+ LA     HGLYPI  +P  G+ T++QVT GALGDSFYEYLLKVW+QGG+ E +YR MY+ AMDGVAE+L++K+   G+T++S+WNG+R  ++MDHL CFLAG+LALG+ T  D  +A RDLR  KALA+TCY MY R  TGL+PE+V F    DM     A +Y LRPET ES F+LHQ+TGDP+YREW W IF+AIE+HC+    YGSHPDV NP   A+D++ESFF  ETLKYL+L+  PDH +DL +   NTEAHPL+IF+      G +Q
Sbjct:  275 TSTMNGLLEREISEAMREESDRLGRERAAVIRAAMDLLWKGYSEHAWGYDEVKPLSKKGSDNWGGMGVTLVDSLDTLWLMGLTEEFYNGRDWVRDHLTFNEVGMVSVFETTIRVLGGLLSAFELSRDEVFLERAKDLADRLMPAFGTSTGIPYKLVNLSNGKTGGGSYSVLSELGTLQLEFRYLSHEVGDEKYARTAMRAFDFLAGRTVPHGLYPIRINPNTGKFTSSQVTFGALGDSFYEYLLKVWMQGGRREESYRRMYEDAMDGVAELLVQKAR--GLTYLSEWNGTRRQHRMDHLACFLAGNLALGAMTSHDSRRAARDLRTGKALAYTCYQMYLRTATGLSPEVVEFNGAGDMRARDQARFYILRPETLESFFVLHQLTGDPVYREWGWEIFRAIERHCRVGVAYGSHPDVENPGLEAKDHMESFFPGETLKYLYLLMQPDHPIDLMEYTLNTEAHPLKIFTFDDAAAGRSQ 749          
BLAST of mRNA_C-tenellus_contig1096.5.1 vs. uniprot
Match: A0A7S1GA01_9STRA (alpha-1,2-Mannosidase n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GA01_9STRA)

HSP 1 Score: 566 bits (1458), Expect = 3.940e-194
Identity = 275/473 (58.14%), Postives = 343/473 (72.52%), Query Frame = 3
Query:   87 LRDGLTNTQVTTEMREESDRIGRERAAKVKAAMQHVWTNYRQYAWGWDELAPRTKKGKNPWGSMGVTLVDSLDTLWLMGMKDEFWEARDWVRDKLTFDKANSVSVFETTIRELGGLLSAYDLSGDKTFLTKAQMLGDKLLPAFNTNSGLPTSHVNFKSGTARR-----SQSVLAEIGTLQVEFRYLSHATGDPKYANKVNHVFEHLAQIGGNHGLYPIYFSPTNGRSTTTQVTLGALGDSFYEYLLKVWLQGGKTESTYRDMYDRAMDGVAEVLIKKSNPSGMTFVSDWNGSRNINKMDHLVCFLAGSLALGSTTHEDPEKAE---RDLRLAKALAFTCYNMYSRQKTGLAPEMVNFRDGQDMVVPGNAGYYKLRPETAESLFILHQITGDPIYREWSWSIFQAIEKHCKTPNGYGSHPDVNNPSARAEDNLESFFLAETLKYLFLIQDPDHIVDLTKVVFNTEAHPLRIFSE 1481
            L  G  +  +  E+  ESDR+GRERAA VKAAMQH W  Y+  AWG DEL PR+ + +N WG MG+TL+DSLDTLWLMGMKDEF EA +WV+  L F +  SVSVFET IR LGGLL+AYD+SG+K FL KA+ +G +L+PAFNT SG+P + V+  SGTA       S S+L+E+GT+QVEFRYLSHA+GD  +  K   V E L +     GLYPIY +P +G    + VT GALGDSFYEYLLKVWLQGGK E  YR+MYDRAMDG+   L+K + PS + +VSDW+G+RN++KMDHLVCF+ G LALG+ + +    A    RDL+ AKALA+TCY MY+R  TGL+ E V FR GQD V    A +Y LRPE +ESLFILHQ+TG+PIYREW W +FQAIE++ K   GYG+HPDV + +   +D +ESFFLAETLKYL+L+Q PDH V L   VFNTEAHPL ++ +
Sbjct:   56 LAAGTFSDDIAPEVMAESDRLGRERAAAVKAAMQHAWKGYKDRAWGADELKPRSGRSQNNWGGMGMTLIDSLDTLWLMGMKDEFREATEWVKAHLNFAQPRSVSVFETNIRALGGLLAAYDVSGEKVFLDKAKDIGSRLMPAFNTPSGIPMNSVHLTSGTASNPSWTGSSSILSELGTMQVEFRYLSHASGDASFGRKAEQVIETLNKHAPADGLYPIYINPRSGTPANSHVTFGALGDSFYEYLLKVWLQGGKKEGMYREMYDRAMDGMTNKLLKTTTPSNLMYVSDWDGNRNVHKMDHLVCFVPGMLALGAYSSDGTRGAGNKWRDLKNAKALAYTCYQMYARMATGLSAEYVEFRGGQDFVAAPRAPFYILRPEASESLFILHQLTGNPIYREWGWRMFQAIERYTKVEYGYGAHPDVRDTARTPDDRMESFFLAETLKYLYLLQSPDHDVSLENFVFNTEAHPLSVWGK 528          
BLAST of mRNA_C-tenellus_contig1096.5.1 vs. uniprot
Match: A0A7S3XK61_HETAK (alpha-1,2-Mannosidase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XK61_HETAK)

HSP 1 Score: 522 bits (1345), Expect = 1.060e-175
Identity = 250/458 (54.59%), Postives = 325/458 (70.96%), Query Frame = 3
Query:  138 SDRIGRERAAKVKAAMQHVWTNYRQYAWGWDELAPRTKKGKNPWGSMGVTLVDSLDTLWLMGMKDEFWEARDWVRDKLTFDKANSVSVFETTIRELGGLLSAYDLSGDKTFLTKAQMLGDKLLPAFNTNSGLPTSHVNFKSGTARR-----SQSVLAEIGTLQVEFRYLSHATGDPKYANKVNHVFEHLAQIGGNHGLYPIYFSPTNGRSTTTQVTLGALGDSFYEYLLKVWLQGGKTESTYRDMYDRAMDGVAEVLIKKSNPSGMTFVSDWNGSRNINKMDHLVCFLAGSLALGSTTHEDPE-----KAERDLRLAKALAFTCYNMYSRQKTGLAPEMVNFRDGQDMVVPGNAGYYKLRPETAESLFILHQITGDPIYREWSWSIFQAIEKHCKTPNGYGSHPDVNNPSARAEDNLESFFLAETLKYLFLIQDPDHIVDLTKVVFNTEAHPLRIFSE 1481
            SD +GR+RA  ++A  +H W  Y+ +AWG DE+ P++ +    WG M VT+VD+LDT+WLMG+KDEFWEARD+++  L+F K   VSVFETTIR LGGLLSAYDLSGDK FLTKA+ LG +L  AFNTNSG+P S V+ ++G           ++L+E+GTLQVEFRYLS ATG+ +Y  K   VFE L      +GL PIY S  +G    +++T GALGDS+YEYLLK WLQGG+ E   R+MYD A+ GV + L++++ PSG  +++D  G R  +KMDHL CF+A +LALG+  H DP+     +A RD+++AK L  TCY MY R  TGL+PE V FR GQD+V P +A +Y LRPE  E+LF L+  T D  YREWSW IFQAIEKHC+T   YG+HPDV N   + +D +ESFFLAET KYL+LIQDPD  +DL + VFNTEAHP+++F +
Sbjct:  163 SDALGRKRADAIRAGFKHAWDGYKAHAWGADEVKPQSGRRNENWGGMAVTMVDALDTIWLMGLKDEFWEARDYIKSHLSFGKTGQVSVFETTIRSLGGLLSAYDLSGDKVFLTKAEDLGGRLAKAFNTNSGIPYSTVHLQNGHGSTPGWTGGNAILSELGTLQVEFRYLSKATGNMEYGRKATKVFEQLRNKPTTNGLVPIYVSINSGNFQGSKITFGALGDSYYEYLLKTWLQGGRREGYLREMYDAAVQGVHDKLVQRTTPSGFLYLADLEGGRVKHKMDHLACFMAATLALGA--HTDPQGADSPRARRDMQVAKELGHTCYQMYRRTATGLSPEFVEFRAGQDIVNPSSASFYILRPEAVEALFYLYWFTKDHTYREWSWEIFQAIEKHCRTSIAYGAHPDVRNTGRKPDDRMESFFLAETFKYLYLIQDPDQPIDLYEYVFNTEAHPMKVFKD 618          
BLAST of mRNA_C-tenellus_contig1096.5.1 vs. uniprot
Match: A0A5A8EAJ7_CAFRO (alpha-1,2-Mannosidase n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EAJ7_CAFRO)

HSP 1 Score: 532 bits (1370), Expect = 2.570e-174
Identity = 255/477 (53.46%), Postives = 342/477 (71.70%), Query Frame = 3
Query:   87 LRDGLTNTQVTTEMREESDRIGRERAAKVKAAMQHVWTNYRQYAWGWDELAPRTKKGKNPWGSMGVTLVDSLDTLWLMGMKDEFWEARDWVRDKLTFDKANSVSVFETTIRELGGLLSAYDLSGDKTFLTKAQMLGDKLLPAFNTNSGLPTSHVNFKSGTARRS-----QSVLAEIGTLQVEFRYLSHATGDPKYANKVNHVFEHLAQIGGNHGLYPIYFSPTNGRSTTTQVTLGALGDSFYEYLLKVWLQGGKT----ESTYRDMYDRAMDGVAEVLIKKSNPSGMTFVSDWNGSRNINKMDHLVCFLAGSLALGSTTHEDP---EKAERDLRLAKALAFTCYNMYSRQKTGLAPEMVNFRDGQDMVVPGNAGYYKLRPETAESLFILHQITGDPIYREWSWSIFQAIEKHCKTPNGYGSHPDVNNPSARAEDNLESFFLAETLKYLFLIQDPDHIVDLTKVVFNTEAHPLRIFSE 1481
            L DG  +  ++ E    SD +G+ RA ++KA MQ VW  YR  AWG DEL PR+   +N WG M  T++D+LDTLW+MGM DEF EA +++RD + F    +VSVFETTIR LGGLLSAYDLSG++ +L KA+ LGD+L  +F T SG+P   +N +SG    S      S+LAE+GT+QVE RYLSHATG P Y  K  +    L +    HGLYPIY SP  G+ T  Q+T GALGDSFYEYL+KVW+QGG      +  +RDMYD AM G+ +VL+++S+PS + +V+D+NG++ ++KMDHLVCF+ G LALG+ T       +  +RDL+ AKA+A+TCY MY+RQ TG+APE V+FR+G D+VVP  A +Y LRPE AESL++LHQ+TG+PIYREW W ++Q+I+++CKT +GYG+ PDV + S  A+D +ESFFLAET+KYL+++Q PDH + L + VFNTEAHP+R F  
Sbjct:  490 LADGSFSDDISKEELLRSDEVGKGRAEQIKAGMQFVWGEYRSKAWGADELRPRSGTSQNNWGGMAFTMIDALDTLWVMGMYDEFNEATEYIRDHVHFGVPRTVSVFETTIRGLGGLLSAYDLSGERVYLEKAKDLGDRLAKSFATPSGVPMGQINLQSGQGHNSGWTGSASILAEVGTVQVEHRYLSHATGIPYYGRKAENAIHALRKHPQPHGLYPIYISPQTGQPTNRQITFGALGDSFYEYLVKVWVQGGSPIQGGDRVFRDMYDEAMQGLHDVLLQRSSPSRLQYVADFNGAQPVHKMDHLVCFVPGMLALGAWTAAGTGGAQHVQRDLQAAKAIAYTCYQMYARQATGIAPEYVDFREGADIVVPSRAPFYILRPEAAESLYVLHQLTGNPIYREWGWKMWQSIDRYCKTKHGYGAFPDVRDVSRPADDRMESFFLAETMKYLYMLQSPDHPISLERYVFNTEAHPMRRFDH 966          
BLAST of mRNA_C-tenellus_contig1096.5.1 vs. uniprot
Match: A0A7S2UB93_9STRA (alpha-1,2-Mannosidase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UB93_9STRA)

HSP 1 Score: 514 bits (1325), Expect = 1.700e-171
Identity = 262/489 (53.58%), Postives = 337/489 (68.92%), Query Frame = 3
Query:   60 YEVVGYD--TDLRDGLTNTQVTTEMREESDRIGRERAAKVKAAMQHVWTNYRQYAWGWDELAPRTKKGKNPWGSMGVTLVDSLDTLWLMGMKDEFWEARDWVRDKLTFDKANSVSVFETTIRELGGLLSAYDLSGDKTFLTKAQMLGDKLLPAFNTNSGLPTSHVNFKSGTARRS------QSVLAEIGTLQVEFRYLSHATGDPKYANKVNHVFEHLAQIGG-NHGLYPIYFSPTNG--RSTTTQVTLGALGDSFYEYLLKVWLQGGKTESTYRDMYDRAMDGVAEVLIKKSNPSGMTFVSDWNGSRNINKMDHLVCFLAGSLALGSTTHE---DPEKAERDLRLAKALAFTCYNMYSRQKTGLAPEMVNFRDGQDMVVPGNAGYYKLRPETAESLFILHQITGDPIYREWSWSIFQAIEKHCKTPNGYGSHPDVNNPSARAEDNLESFFLAETLKYLFLIQDPDHIVD-LTKVVFNTEAHPLRIFSE 1481
            Y+ +G D   + +DG T   +T E+R++SD + R R   VK AM+H W  Y+ +A+G DE+ P + +G N WG MG TLVDSLDTLWLMG+K+EFWE RDWVRD L  D  NSVSVFETTIR LGGLLSAYD SGDK FL KAQ LG +L+ AF++ SG+P   V+     +  +       ++L+E GTLQVEFRYL+ ATG  +YA K   VFE +  +   N+GL+P Y    N   +    ++T GA+GDS YEY+LK+WLQGGKTE  YR MYD AM G+ E+L++ S PS + +++D N     +KMDHLVCF+ GSL LG+ T     D E+A+RDL++ K LA+TCY MY+R KTG++PE+V F +  D      A +Y LRPET E+ FIL+ +TGDPIYREW W +FQ+IE+ CKT   YGS  DVNN     ED +ESFFLAET+KYL+L+QDPD  +D L K VFNTEAHP+RIFSE
Sbjct:  213 YKPLGADRFAEWKDGSTPYAITDEIRKQSDDLARTRRVHVKNAMKHAWKGYKAHAFGQDEVLPISGRGHNNWGGMGTTLVDSLDTLWLMGLKEEFWEGRDWVRDHLEHDHVNSVSVFETTIRSLGGLLSAYDWSGDKVFLEKAQDLGKRLVRAFDSPSGIPYGQVSLSHPESHNNLGWAGGNAILSEAGTLQVEFRYLARATGITEYATKSERVFEVMEPLQSKNNGLFPYYIKNKNKEVKFGNAKITFGAMGDSIYEYMLKIWLQGGKTEPLYRTMYDNAMQGMHEMLLQYSKPSNLAYIADQNSGNLDHKMDHLVCFMGGSLVLGAYTDPLGLDSERAQRDLKVGKQLAYTCYQMYARTKTGISPEVVRFGE-HDFSTDHGAPFYILRPETVETFFILNHLTGDPIYREWGWEVFQSIERFCKTKIAYGSLHDVNNDGQGPEDRMESFFLAETMKYLYLLQDPDTEIDILHKHVFNTEAHPVRIFSE 700          
BLAST of mRNA_C-tenellus_contig1096.5.1 vs. uniprot
Match: A0A7S4N8K7_9STRA (alpha-1,2-Mannosidase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N8K7_9STRA)

HSP 1 Score: 506 bits (1303), Expect = 1.040e-170
Identity = 254/489 (51.94%), Postives = 341/489 (69.73%), Query Frame = 3
Query:   60 YEVVGYD--TDLRDGLTNTQVTTEMREESDRIGRERAAKVKAAMQHVWTNYRQYAWGWDELAPRTKKGKNPWGSMGVTLVDSLDTLWLMGMKDEFWEARDWVRDKLTFDKAN-SVSVFETTIRELGGLLSAYDLSGDKTFLTKAQMLGDKLLPAFNTNSGLPTSHVNFKSGTARR-----SQSVLAEIGTLQVEFRYLSHATGDPKYANKVNHVFEHLAQIGGNHGLYPIYFSPTNGRST--TTQVTLGALGDSFYEYLLKVWLQGGKTESTYRDMYDRAMDGVAEVLIKKSNPSGMTFVSDWNGSRNINKMDHLVCFLAGSLALGSTTHE---DPEKAERDLRLAKALAFTCYNMYSRQKTGLAPEMVNF-RDGQDMVVPGNAGYYKLRPETAESLFILHQITGDPIYREWSWSIFQAIEKHCKTPNGYGSHPDVNNPSARAEDNLESFFLAETLKYLFLIQDPDHIVDLT-KVVFNTEAHPLRIFSE 1481
            Y  +G D   + +DG T   +T  + ++SD + R R   VK AM+H W+ Y+++A+G DE+ P++ K  + WG MG TLVDSLDTLWLMGMK+EF +ARDWVRD L  D  + S+SVFETTIR LGGLLSAYD SGDK FL KA  LG +L  +F + SG+P   VN   G A       + ++L+E  T+QVE+RYL+ ATG  +YA+K   V+E + +I  ++GLYP+Y   T  + +    +++ GA+GDSFYEY+LK+WLQGGK ES YR+MYDR++ G+ + L+ KS P+G+T+++D    R  +KMDHLVCF+ G LALG+ T     D  +A+RDL+ AK L +TCY MY+R KTG++PE V F +D  D  V  NA +Y LRPET ES F+L+Q+TGDP YREW W +FQ+IE++C+T   YGS  +VNNP A  ED +ESFFLAET+KYL+L+ DPD  VD+  K VFNTEAHP+RI  E
Sbjct:   31 YRPLGGDRFVEWKDGETPYAITPALLKQSDDLARSRRDYVKKAMEHAWSGYKKHAFGQDEVLPQSGKSHSNWGGMGTTLVDSLDTLWLMGMKEEFTQARDWVRDHLDHDHVHKSISVFETTIRSLGGLLSAYDWSGDKAFLDKANDLGARLFKSFQSPSGIPFGSVNINDGRASNFGWAGNNAILSEFTTIQVEYRYLARATGKKEYADKAERVYELMKEIEPSNGLYPLYVRNTGEKPSFANQKISFGAMGDSFYEYMLKIWLQGGKKESMYREMYDRSIQGMHDELLFKSTPTGLTYIADKVSGRVDHKMDHLVCFMGGLLALGAYTDPQGFDSTRAQRDLKTAKELTYTCYQMYARMKTGISPEFVAFGKDSNDFTVGHNAAFYILRPETVESFFVLNQLTGDPAYREWGWEVFQSIERYCRTDIAYGSLTNVNNPGAAPEDRMESFFLAETIKYLYLLFDPDTEVDIVNKHVFNTEAHPMRILPE 519          
BLAST of mRNA_C-tenellus_contig1096.5.1 vs. uniprot
Match: A0A5A8CLU8_CAFRO (alpha-1,2-Mannosidase n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CLU8_CAFRO)

HSP 1 Score: 532 bits (1370), Expect = 2.560e-170
Identity = 255/477 (53.46%), Postives = 342/477 (71.70%), Query Frame = 3
Query:   87 LRDGLTNTQVTTEMREESDRIGRERAAKVKAAMQHVWTNYRQYAWGWDELAPRTKKGKNPWGSMGVTLVDSLDTLWLMGMKDEFWEARDWVRDKLTFDKANSVSVFETTIRELGGLLSAYDLSGDKTFLTKAQMLGDKLLPAFNTNSGLPTSHVNFKSGTARRS-----QSVLAEIGTLQVEFRYLSHATGDPKYANKVNHVFEHLAQIGGNHGLYPIYFSPTNGRSTTTQVTLGALGDSFYEYLLKVWLQGGKT----ESTYRDMYDRAMDGVAEVLIKKSNPSGMTFVSDWNGSRNINKMDHLVCFLAGSLALGSTTHEDP---EKAERDLRLAKALAFTCYNMYSRQKTGLAPEMVNFRDGQDMVVPGNAGYYKLRPETAESLFILHQITGDPIYREWSWSIFQAIEKHCKTPNGYGSHPDVNNPSARAEDNLESFFLAETLKYLFLIQDPDHIVDLTKVVFNTEAHPLRIFSE 1481
            L DG  +  ++ E    SD +G+ RA ++KA MQ VW  YR  AWG DEL PR+   +N WG M  T++D+LDTLW+MGM DEF EA +++RD + F    +VSVFETTIR LGGLLSAYDLSG++ +L KA+ LGD+L  +F T SG+P   +N +SG    S      S+LAE+GT+QVE RYLSHATG P Y  K  +    L +    HGLYPIY SP  G+ T  Q+T GALGDSFYEYL+KVW+QGG      +  +RDMYD AM G+ +VL+++S+PS + +V+D+NG++ ++KMDHLVCF+ G LALG+ T       +  +RDL+ AKA+A+TCY MY+RQ TG+APE V+FR+G D+VVP  A +Y LRPE AESL++LHQ+TG+PIYREW W ++Q+I+++CKT +GYG+ PDV + S  A+D +ESFFLAET+KYL+++Q PDH + L + VFNTEAHP+R F  
Sbjct:  880 LADGSFSDDISKEELLRSDEVGKGRAEQIKAGMQFVWGEYRSKAWGADELRPRSGTSQNNWGGMAFTMIDALDTLWVMGMYDEFNEATEYIRDHVHFGVPRTVSVFETTIRGLGGLLSAYDLSGERVYLEKAKDLGDRLAKSFATPSGVPMGQINLQSGQGHNSGWTGSASILAEVGTVQVEHRYLSHATGIPYYGRKAENAIHALRKHPQPHGLYPIYISPQTGQPTNRQITFGALGDSFYEYLVKVWVQGGSPIQGGDRVFRDMYDEAMQGLHDVLLQRSSPSRLQYVADFNGAQPVHKMDHLVCFVPGMLALGAWTAAGTGGAQHVQRDLQAAKAIAYTCYQMYARQATGIAPEYVDFREGADIVVPSRAPFYILRPEAAESLYVLHQLTGNPIYREWGWKMWQSIDRYCKTKHGYGAFPDVRDVSRPADDRMESFFLAETMKYLYMLQSPDHPISLERYVFNTEAHPMRRFDH 1356          
BLAST of mRNA_C-tenellus_contig1096.5.1 vs. uniprot
Match: A0A7S2PJG9_9STRA (alpha-1,2-Mannosidase n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PJG9_9STRA)

HSP 1 Score: 510 bits (1314), Expect = 2.060e-169
Identity = 261/477 (54.72%), Postives = 331/477 (69.39%), Query Frame = 3
Query:   93 DGLTNTQVTTEMREESDRIGRERAAKVKAAMQHVWTNYRQYAWGWDELAPRTKKGKNPWGSMGVTLVDSLDTLWLMGMKDEFWEARDWVRDKLTFDKANSVSVFETTIRELGGLLSAYDLSGDKTFLTKAQMLGDKLLPAFNTNSGLPTSHVNFKSGTARR-----SQSVLAEIGTLQVEFRYLSHATGDPKYANKVNHVFEHLAQIGGNHGLY--PIYFSPTNGRS--TTTQVTLGALGDSFYEYLLKVWLQGGKTESTYRDMYDRAMDGVAEVLIKKSNPSGMTFVSD-WNGSRNINKMDHLVCFLAGSLALGSTTHE---DPEKAERDLRLAKALAFTCYNMYSRQKTGLAPEMVNFRDGQDMVVPGNAGYYKLRPETAESLFILHQITGDPIYREWSWSIFQAIEKHCKTPNGYGSHPDVNNPSARAEDNLESFFLAETLKYLFLIQDPDHIVD-LTKVVFNTEAHPLRIFSE 1481
            +G +   +T  +RE+SD + R R   V  AM+HVW NY++YA+G DEL P +KKG   WG MG TLVD+LDTLWLMGMKDEFWEARDWVRD L+ DK   VS FETTIR LGGLLSAYDLSGDK FL KA  LG KL  A++T SGLP   VN K+G A       +  ++AE  T Q+E+RYL+ ATG   YA K   VF+ L +I    GL    +     NG S  T ++ + GA  DS YEY++K+++QGG+ E  YR M+D+AM+GV E L++KS P+G+T+++D  NG R  +KMDHL CF+ GSLALG+ T     D  +A+RDL+ AKAL +TCY MY+R +TG++PE V FR G D  VP +A +Y LRPE  E+ + L  +TGDPIYREW W +FQ+IEK+CKT  GYGS  DVN PS + ED +ESFFLAETLKYL+L+ DPD  +D L K VFNTEAHP +IF+ 
Sbjct:  263 EGDSPYAMTDSLREQSDNLARSRRVHVVNAMKHVWKNYKEYAFGMDELHPISKKGTANWGGMGTTLVDALDTLWLMGMKDEFWEARDWVRDHLSHDKVGDVSGFETTIRSLGGLLSAYDLSGDKVFLEKADDLGAKLFKAYDTPSGLPKGSVNLKTGRAHNMNWNGNAYIVAEAATQQIEYRYLAKATGKEDYAKKSEKVFDILEKITPEDGLLFEKLKEGGENGASFITASKSSFGACSDSAYEYMIKIYVQGGRKEEMYRKMWDKAMNGVHEQLLQKSTPNGLTYIADRLNGGRLDHKMDHLACFMGGSLALGAYTDPSGIDSSRAKRDLKTAKALTYTCYQMYARTQTGISPEFVQFRGGNDFKVPSSAPFYILRPEVVEAFYYLSVLTGDPIYREWGWEVFQSIEKYCKTEYGYGSLHDVNEPSMKPEDRMESFFLAETLKYLYLLFDPDSEIDILNKHVFNTEAHPFKIFNN 739          
BLAST of mRNA_C-tenellus_contig1096.5.1 vs. uniprot
Match: A0A7S2KLB8_9STRA (alpha-1,2-Mannosidase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KLB8_9STRA)

HSP 1 Score: 498 bits (1282), Expect = 6.790e-168
Identity = 252/458 (55.02%), Postives = 329/458 (71.83%), Query Frame = 3
Query:  138 SDRIGRERAAKVKAAMQHVWTNYRQYAWGWDELAPRTKKGKNPWGSMGVTLVDSLDTLWLMGMKDEFWEARDWVRDKLTFDKANSVSVFETTIRELGGLLSAYDLSGDKTFLTKAQMLGDKLLPAFNTNSGLPTSHV----NFKSGTARRSQS-VLAEIGTLQVEFRYLSHATGDPKYANKVNHVFEHLAQIGGNHGLYPIYFSPTNGRS---TTTQVTLGALGDSFYEYLLKVWLQGGKTESTYRDMYDRAMDGVAEVLIKKSNPSGMTFVSDWNGSRNINKMDHLVCFLAGSLALGSTTHE---DPEKAERDLRLAKALAFTCYNMYSRQKTGLAPEMVNFRDGQDMVVPGNAGYYKLRPETAESLFILHQITGDPIYREWSWSIFQAIEKHCKTPNGYGSHPDVNNPSARAEDNLESFFLAETLKYLFLIQDPDHIVD-LTKVVFNTEAHPLRIF 1475
            +D + RER   ++ AM+H W+ YR+YAWG DEL P  K+G+N +G MG TLVDSLDTLWLMGM DEFWEARDWVRD+L  D    +SVFETTIR LGGLL+AYD SGD+ FL KA  LG +L+ AF++ SG+P  +     N    TA   +S +LAE+GTLQ+EFR+L+ ATG   YA+K N VFE +  I  +HGLYPI F    G+    +  +++ GA+GDSFYEYLLKVW+QGGK ES YRDM+DR+MDG+ + L++KS PSG+ +++D    +  +KMDHL CF+ G+LALG+ T     D  +A+RDL+  KALA+TCY MY+R  TG++PE V F  G+D+ + G+A +  LRPE  E+ F+L+Q+TGD  YREW W IFQA EKH +T  GY S P+VN+     +D +ESFF+AETLKYL+L+QDPD  +D L K VFNTEAHPLR+F
Sbjct:   14 NDTLARERREIIRDAMKHTWSGYRKYAWGKDELKPVKKEGRNNYGGMGTTLVDSLDTLWLMGMYDEFWEARDWVRDELDHDAVADISVFETTIRSLGGLLAAYDWSGDEVFLEKADDLGSRLVRAFDSPSGIPYGNTALNRNHSYNTAWTGESSILAELGTLQLEFRHLAKATGKQHYADKANKVFEVMKTIEPDHGLYPI-FVKNQGKEPIFSYDKISFGAMGDSFYEYLLKVWIQGGKAESMYRDMWDRSMDGLHKYLLQKSTPSGLYYLADLVDKKLDHKMDHLACFMGGALALGAYTDPNGLDSPRAKRDLQTGKALAYTCYQMYTRTLTGISPEFVIFSKGEDIGI-GSATHNMLRPEAVETFFVLYQLTGDYTYREWGWEIFQAFEKHSRTSAGYASIPNVNSVFREPKDQMESFFIAETLKYLYLLQDPDTPIDILDKHVFNTEAHPLRMF 469          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig1096.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGK4_ECTSI1.420e-21968.11alpha-1,2-Mannosidase n=2 Tax=Ectocarpus TaxID=287... [more]
D7FS40_ECTSI1.160e-19457.65alpha-1,2-Mannosidase n=1 Tax=Ectocarpus siliculos... [more]
A0A7S1GA01_9STRA3.940e-19458.14alpha-1,2-Mannosidase n=1 Tax=Bicosoecida sp. CB-2... [more]
A0A7S3XK61_HETAK1.060e-17554.59alpha-1,2-Mannosidase n=1 Tax=Heterosigma akashiwo... [more]
A0A5A8EAJ7_CAFRO2.570e-17453.46alpha-1,2-Mannosidase n=4 Tax=Cafeteria roenbergen... [more]
A0A7S2UB93_9STRA1.700e-17153.58alpha-1,2-Mannosidase n=1 Tax=Attheya septentriona... [more]
A0A7S4N8K7_9STRA1.040e-17051.94alpha-1,2-Mannosidase n=1 Tax=Odontella aurita Tax... [more]
A0A5A8CLU8_CAFRO2.560e-17053.46alpha-1,2-Mannosidase n=1 Tax=Cafeteria roenbergen... [more]
A0A7S2PJG9_9STRA2.060e-16954.72alpha-1,2-Mannosidase n=2 Tax=Skeletonema marinoi ... [more]
A0A7S2KLB8_9STRA6.790e-16855.02alpha-1,2-Mannosidase n=1 Tax=Leptocylindrus danic... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig1096contigC-tenellus_contig1096:4152..13607 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LGK4
Preferred nameMAN1A2
PFAMsGlyco_hydro_47
Model size1936
Max annot lvl2759|Eukaryota
KEGG koko:K01230
KEGG ReactionR05982,R06722
KEGG Pathwayko00510,ko00513,ko01100,ko04141,map00510,map00513,map01100,map04141
KEGG ModuleM00073,M00074
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0002252,GO:0002376,GO:0003674,GO:0003824,GO:0004553,GO:0004559,GO:0004571,GO:0005488,GO:0005509,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005783,GO:0005793,GO:0005794,GO:0005802,GO:0005829,GO:0006464,GO:0006486,GO:0006487,GO:0006491,GO:0006508,GO:0006511,GO:0006517,GO:0006807,GO:0006950,GO:0007275,GO:0007568,GO:0007585,GO:0008150,GO:0008152,GO:0008340,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0010033,GO:0010243,GO:0010259,GO:0010498,GO:0012505,GO:0015923,GO:0015924,GO:0016020,GO:0016021,GO:0016787,GO:0016798,GO:0019538,GO:0019941,GO:0030163,GO:0030173,GO:0030323,GO:0030324,GO:0030433,GO:0031090,GO:0031224,GO:0031228,GO:0031300,GO:0031301,GO:0031410,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0033554,GO:0034645,GO:0034976,GO:0035010,GO:0035295,GO:0036211,GO:0036503,GO:0036507,GO:0036508,GO:0042221,GO:0042493,GO:0043161,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0046872,GO:0048286,GO:0048513,GO:0048731,GO:0048856,GO:0050896,GO:0051603,GO:0051716,GO:0060541,GO:0070085,GO:0071704,GO:0072347,GO:0097708,GO:0098588,GO:0098791,GO:1901135,GO:1901137,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901698,GO:1904381
Exons11
Evalue6.1e-223
EggNOG OGsKOG2204@1|root,KOG2204@2759|Eukaryota
EC3.2.1.113
Descriptionmannosyl-oligosaccharide 1,2-alpha-mannosidase activity
Cds size1479
COG categoryG
CAZyGH47
BRITEko00000,ko00001,ko00002,ko01000,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig1096.5.1prot_C-tenellus_contig1096.5.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig1096 4601..13599 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789156.605287-UTR-C-tenellus_contig1096:4151..46001680789156.605287-UTR-C-tenellus_contig1096:4151..4600Choristocarpus tenellus KU2346UTRC-tenellus_contig1096 4152..4600 -
1680789156.7613857-UTR-C-tenellus_contig1096:13599..136071680789156.7613857-UTR-C-tenellus_contig1096:13599..13607Choristocarpus tenellus KU2346UTRC-tenellus_contig1096 13600..13607 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789156.6162927-CDS-C-tenellus_contig1096:4600..48161680789156.6162927-CDS-C-tenellus_contig1096:4600..4816Choristocarpus tenellus KU2346CDSC-tenellus_contig1096 4601..4816 -
1680789156.626178-CDS-C-tenellus_contig1096:7179..73051680789156.626178-CDS-C-tenellus_contig1096:7179..7305Choristocarpus tenellus KU2346CDSC-tenellus_contig1096 7180..7305 -
1680789156.6440134-CDS-C-tenellus_contig1096:7878..79621680789156.6440134-CDS-C-tenellus_contig1096:7878..7962Choristocarpus tenellus KU2346CDSC-tenellus_contig1096 7879..7962 -
1680789156.6574595-CDS-C-tenellus_contig1096:8519..86181680789156.6574595-CDS-C-tenellus_contig1096:8519..8618Choristocarpus tenellus KU2346CDSC-tenellus_contig1096 8520..8618 -
1680789156.6696768-CDS-C-tenellus_contig1096:9034..91401680789156.6696768-CDS-C-tenellus_contig1096:9034..9140Choristocarpus tenellus KU2346CDSC-tenellus_contig1096 9035..9140 -
1680789156.679885-CDS-C-tenellus_contig1096:9503..95951680789156.679885-CDS-C-tenellus_contig1096:9503..9595Choristocarpus tenellus KU2346CDSC-tenellus_contig1096 9504..9595 -
1680789156.6925762-CDS-C-tenellus_contig1096:9835..99881680789156.6925762-CDS-C-tenellus_contig1096:9835..9988Choristocarpus tenellus KU2346CDSC-tenellus_contig1096 9836..9988 -
1680789156.7156224-CDS-C-tenellus_contig1096:10510..106421680789156.7156224-CDS-C-tenellus_contig1096:10510..10642Choristocarpus tenellus KU2346CDSC-tenellus_contig1096 10511..10642 -
1680789156.726706-CDS-C-tenellus_contig1096:11135..113111680789156.726706-CDS-C-tenellus_contig1096:11135..11311Choristocarpus tenellus KU2346CDSC-tenellus_contig1096 11136..11311 -
1680789156.73545-CDS-C-tenellus_contig1096:12801..129911680789156.73545-CDS-C-tenellus_contig1096:12801..12991Choristocarpus tenellus KU2346CDSC-tenellus_contig1096 12802..12991 -
1680789156.7479167-CDS-C-tenellus_contig1096:13494..135991680789156.7479167-CDS-C-tenellus_contig1096:13494..13599Choristocarpus tenellus KU2346CDSC-tenellus_contig1096 13495..13599 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig1096.5.1

>prot_C-tenellus_contig1096.5.1 ID=prot_C-tenellus_contig1096.5.1|Name=mRNA_C-tenellus_contig1096.5.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=493bp
MTAEDSIGLGLGTYSFRYEVVGYDTDLRDGLTNTQVTTEMREESDRIGRE
RAAKVKAAMQHVWTNYRQYAWGWDELAPRTKKGKNPWGSMGVTLVDSLDT
LWLMGMKDEFWEARDWVRDKLTFDKANSVSVFETTIRELGGLLSAYDLSG
DKTFLTKAQMLGDKLLPAFNTNSGLPTSHVNFKSGTARRSQSVLAEIGTL
QVEFRYLSHATGDPKYANKVNHVFEHLAQIGGNHGLYPIYFSPTNGRSTT
TQVTLGALGDSFYEYLLKVWLQGGKTESTYRDMYDRAMDGVAEVLIKKSN
PSGMTFVSDWNGSRNINKMDHLVCFLAGSLALGSTTHEDPEKAERDLRLA
KALAFTCYNMYSRQKTGLAPEMVNFRDGQDMVVPGNAGYYKLRPETAESL
FILHQITGDPIYREWSWSIFQAIEKHCKTPNGYGSHPDVNNPSARAEDNL
ESFFLAETLKYLFLIQDPDHIVDLTKVVFNTEAHPLRIFSET*
back to top

mRNA from alignment at C-tenellus_contig1096:4152..13607-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig1096.5.1 ID=mRNA_C-tenellus_contig1096.5.1|Name=mRNA_C-tenellus_contig1096.5.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=9456bp|location=Sequence derived from alignment at C-tenellus_contig1096:4152..13607- (Choristocarpus tenellus KU2346)
AGAATGGGATGACAGCAGAGGATTCAATAGGGTTAGGGTTAGGGACATAC TCCTTCCGCTATGAGGTGGTTGGCTATGATACTGACCTGAGGGATGGACT TACTAACACACAGGTGAGTCGTGTCATGTTGTGTTGTGTGTACAAAAGTT GGCAATTGATTGACTAGATGCTCCTTAAGAGTATATAATTAATGTGGTGT ATTATAGTACAATGTTTGTGAGATGATGCTAGTGATAGAATCATGCTGAG GGCTACTTGCACTTCTCTAGCTACATGTCATGCATTTCATGCAGTGCACT CTTTAGTTAAGTTGTTCACTGGTACTGTATACACCTCATAGTAGTAGTAA TAGCAATTAGTATTGTGTGGGATGATAGTAATGGAGGTGATGGTGATGGT CATTATGCTGCTCTGACATATTTGTACATTCATACCACAGACTCCATGGC TAAGATTGATTCATTTTTATTTTTTGCTGACTCATACATACATACACATA TATTATGTTTATTATTTATTTTTTTTTAGATATCTACACTGAAAGCATAA CAATGTGCCTCTAGTTCAATACTCCTACACCCTGTTAACACCCTGTTCAT TGTTCTATTCATTCAGGTCACTACAGAAATGAGAGAAGAGAGTGATAGGA TAGGGAGAGAAAGAGCAGCAAAGGTGAAGGCGGCCATGCAACATGTCTGG ACTAATTACAGACAATATGCATGGGGTTGGGATGAACTCGCACCAAGGAC TAAGAAGGGAAAGAATCCATGGGGATCAATGGGAGTCACTCTTGTCGACT CGTTAGGTGAGTGGTACTATTCATGATTAGGGTTAGGGTTAGGGTTAGTT ACCATTGTTATATATATATATATATAAGTTGGCTTGTAGGTTGTGCTCTG CCCTATGTTTGGAACCGATAACTCTGTGTCAAAATAGATAGATCTTGATA TTATTATGATAATGAACTTTATTTGTTGATTTTATTGTGTGTTGATGCTC ATTGTGAGTGTCACTATCCTGCTATTTTAATATTATGTGTACAGTTTTCA TTACCTTTTCATTACTTTTAGTCCATTTAGTTTCCAGGGGGTTAAGATAC CTTCACTATTATTATTATGACATTACTATCACTATCAGTATCGGTCTTCA TAATAATGGCGGTTGCCTGTGTTTGAATGATTCAGCACTGGTGTGCACTT GATTACCTCAAGGGATAGGTTAATCAAATTGATGTTGTCATAGAGCATAC AACTTGTATCCCCCTTCAGTATCATAAAAAAATGGGTTGACTCCACAGTA AAGGAAAAAATCTCTTGCCTCCTTCCCCTATGATACATTTATGTTGACAT ACTTACGCTTATTATTATTATTATTGTATACGTGTATTGTGTTTTTATTA GTGATTCAATCTACTACTGTAGTTGATACTTAGTGTCCACCTAGTCCATA CTATTTTTGTGATACAGTGACAATGTAAGGAGTGATCTTGAGTAACAAGT GATCTTGAGTAAAAATTACAGGTTCGTGACAAGGTGACAAAAGTGATAAG GTGACACGATGTACATGATACTCAATGTAGCAAATTGATTTGGATGTACA CTGGCAATAGTTTGAAGTATCATGTGTTGTGTTCTGATGACCATCCTCAT TGTGGTTAAAGGGTTTGATTATGCTGCTGATGGAGTGTATGTGTGGTGTT GCAGTCTCTCTTCAATCCATTTAATCGCCTCCCCAAGCCAGTGTTTGGTT AAAGCCTTGAATGTGGTGCACTTGAGAAAGAGAAAGCTTGTGGAAGGGCT GACTGTTAATATTTAGCTGGTGGGATTTGGCGGGATTCCCTTCATTTGTC TTTTCCTTTTCAATTTACAATTTATTTTTTCAACTTAATTACAAAAAACA AAAGGTTGGGACTGATCAAACCGACATTTGCAGGTGACTCTAAGCCATTT GAAGGCTTGCTGTACTGCTTTGGTTTGCCCTTAACACACCAGTTGCCATA CCTACCATGTATGTTGATAATACTATTATGTATGTGAGACTTGTGACCTT TGCGGCGGCTGTTGATAATTTCACTGCAATTAACCCTACTGATTCACAAC ACTTTGGTTCTACACATACACACAACATTTCAGTGTGGTCTCTAGTGCAC TGCATCAATTTTTGTTGTCCTACCTTGAATATTCTATCCTGATTATATGT TGTACTATTTATTGATAGTGTTAATTCATACATATATATATATATATTCT TTCTCATCAGCAATGCTGTTCAAAATTATCATCTTGGAATGATTAGACAC ACTGTGGCTCATGGGCATGAAGGACGAGTTCTGGGAAGCAAGGGACTGGG TAAGGGATAAACTGACATTTGACAAAGCCAACAGTGTGAGTGTCTTTGAG ACCACCATCCGTGAGCTGGGAGGTCTCCTGTCTGCCTATGACCTCTCTGG GGACAAGACTTTCCTAACCAAGGTGTGAATTTCGATTTGATCTTGTTTAG CAATATAATAATAATATATTTGCTGTGTGGTTTTGTTTCTTCGGGGTTAG GGTTAGGGTTACGGTTAGGGTTATTTATAAGAATATGCAGTGTGGTGGAG TGGTGACAAAAGGCATCATAACTGAATAAGTAGACATTGGTGAGTTTATG AGGATAGTCATAGGACTCACAAGTGAGGGTTACCTAACATGCACTATCAT GTTGCACTGGACATACTGGAGTTGGTAGAGAGATGTCCTCCCTTTGTTAA ATAAGTGGTCCCAACTCCATACAGTCCAGGTGTTGGATCATTTTAAGAGA TAAGGCACCATGCCCTTTGCTCTTAGTTTGCCATTTGATATATATAGATA TGTGTGTTTGTCTTGTGTATGTGTTTGACTTGTGTGTGTGTGTGTGTGTG TTTGTCTTGTGTCTGATTGGTGCACGGTAGTGTATGACTGACTTGATCTT TGGAACCTCTTACAGGCCCAGATGCTAGGTGACAAGCTACTTCCTGCCTT CAATACCAACAGTGGCCTTCCCACATCACATGTTAACTTTAAAAGTGGAA CAGCAAGAAGGTCTCAGTCAGTGCTGGCAGAGATAGGGACACTACAGGTA AGAAATATTCTTAGGTATGATACTGATGGTATTGATTAACATTTCAGGAA TGAAAAGGATTAATATGTATTGTTATTTTTATTTTTTTATTATTGTTATT TATTCTCTTACAAGTAATTAGGTTTTAAGAACTATGGTTGGGAGGTTTTT GGCATTGTATGTCCATCATCCATCATGAGTGTGTGCTGCAGTATATTGAT ATTGATACGGATATTGATACAATAATACGATTTGCTGGACTGGATAGTGC ATTAGAAGAGATGTATAACCTACAAGCTTTGGTTGGTTTATATTAGTAGA ACTAGAAAACAAGTTTTAATTGATCAATAATAGCGATTTCTCTCTCTCTA TCTATCTATCTCTCAGCCATTTTCCACCATTCACTGTTAGGGTTGTTGAG GTTTGATTTGATAGCACCCTGGCCTCTTACGTCCCTTACATTGAAATCTG AAAATGTTCTGAAAGTGAAGCTTGTGCTCTCATGTTAGATGTATGTGGAC ATGTACCCTCTGAACACAGGTTGAGTTTCGATACCTGAGCCATGCCACTG GTGACCCGAAGTATGCCAACAAGGTCAATCATGTCTTTGAGCACTTAGCA CAGATCGGTGGCAATCATGGACTTTATCCAATATACTTCAGTCCGACCAA TGGCAGGTCAACCACAACACAGGTTAGTCTTCATATTCCAGACTGTAGAG GTTAGGGTTAGGGTTAGGGTTAACAGTCCAAACCTGTAGAAGGGACATGC TGTACATGTAAATTGTGATAGTGATGTGGTCAGCCCTCAGTTGGGTGTTG ATTGTCTATATGGCTATATGGTGCATTCTTTTTTCCCATTGATACGTTTT GACTGGTACAGACCATTATTTAAGCACTGTTGTTATTTGACTGTGCTTTG ACTGTTATGCAGGTCACTCTTGGAGCACTAGGTGATTCATTCTATGAGTA TCTCCTCAAGGTCTGGTTACAGGGAGGAAAGACAGAGTCCACCTACAGAG ATATGTGAGTGACCAGGATCGTCCTTGCAAAACCTCAACCCCTCCACTCC CTAACTTCTTGTCACAACAATTTCAATAATAGTATTACTAGTATTAATGA TACACTCAATTGGTATATTTTACATACAGTTTCAGGATGTGAAAAGGGAG TAAAAAAGATGATTGAAGATCAAGTCATCAGTCGTCAAACGTAAGATGTA AGATGTAAGATGAATGATTTTTTTGAAAAAATAGTTGTTCCTGTCGTACT CACTACAGGCAATACATAAGTAGTGAGGATGGCGTTTTTTCTATGACTTT TTTTTTTTCTTCAATTAACCCTAACCCTAACCTTGATTCTCGTGTGTCCT CATGTGGCATCTTTCAGGTATGACCGGGCTATGGATGGTGTGGCAGAAGT TCTGATCAAGAAGAGCAATCCCAGTGGGATGACCTTTGTCAGTGACTGGA ACGGTTCTCGAAATATTAATAAGGTATACTAATAAGGTGCACTAATTTCA AGGAATTAGGTCTTCATGTTGTAGTGCATGGATCAGTTGGGTTTGCATAG AGATTGTTGGCATGTTTGGGCATTTGTACACAATGTGTGCGTGGATATTG GCGAGTCTTTTTGAATTTCTACTTAAACCTATACTGTGCTGGCTCTGCTT TCAGATGTAGTATCTATCTAGTAGGTCAATGTTATTTTTCTCTTTAAAAT ATTTTATTTTTTGTTCCTGAACTTTTTACTGTAACCATTACATAGTGATT CGGCAGTTCATAGGATATGGAAGTCATACCTCTTGTTGTAATAATAATCA TGACAACAATGCATGGTAGTTGAGTTTAGTGTTTCAAAGTTGCTTTCTCA AGAACAACCAAAATTTATACTCCAACCCCTCTCTCACAGATGGACCATCT TGTGTGCTTCTTGGCTGGATCTTTGGCTCTAGGATCAACAACTCACGAAG ACCCTGAGAAGGCTGAGCGTGACCTACGCCTTGCCAAGGTACTAACAACA CAACACAACTCACCCCATCGTCTTCATTTATAAAAAATATATACTCCAAT TATTAATGCAGTCAAATGTGACTCATTTAAAAATTTCAACTGTGGGATCC ATTGTACTGCGTAGACTCAAAATCTGTTTCTTGAATGCACAAAGTACCAC AGTATTGTAACAAGTATGCCGAGCTGTGTAGTGCTTTTTTTGTGTCTTCT ATGTTGTAGATACTCACATGTCTGTAGACTTAATTGTCGCTGTTTTTTTG TAAACATTCAATATTGTTTCTGTACTTGACAGTTAATTCCAAGGGTAGTG AGTGCATGATTTTCCACATTTATGGTTACATTACATAATGGATGGTCTTA TAACTCTTTCTCCTTCATAACTGACAGCTAAATCTTATCATATCTTTTAT AATCCTGATAATGAAAGTGTCTAGGAATGTATTTGCCCCTAACCCTAACC CTAACCCTGGTCTGTTGCCATCGAAATCTTTTTCTCCTCAACAATGTGAA TGCTTCTACACCACCTCTACTCTACAACACACCACCACAACCCAGGCGCT GGCATTCACTTGTTACAACATGTATTCTAGACAGAAGACAGGCCTTGCTC CAGAGATGGTCAACTTCCGTGATGGGCAGGTATGTGTAATGCTCCATGCA GCCAGAAATGACTGTGGTAAATCCAATGGAGTAGCTCCATCAACGAGTAT TAACATGTCACTTGAGGCATCTTTCATGTAGCTGATTCACATCCTCTAGT GTTTTGTTGTGGCATGGCATGTGTGATGAGGCTTGGTGTTATTTAACACA TGTGTTCCCACATTTTACAACCTTATCAAAAAGATGCTGAAATGTTGCTA TGAATAACCCATGAACCTTCCATATACATACATGTCTAGTAAGACCAATG CAGAGTTTAAATCGATCACCGGTGATGCTGAAAGCTCTTTCTATGTGTCA ACTCTATCTACCCACCATATATTGAGGATGTATGTTGCACTGACTATATT TTTATTTCAAAAAACTCTCACGGTGCAAGTGCCACATTGGATGAATTTAT CATAGGAAATTATCATAGGAAATTATCATAGGAAGTTATCGTATGAAACA CAGCCTAAGTTCCAAGCTGTATTGATACATTGATCAAATCCACCCTAAAT TGTGTAGCATTGTAGTGAGCCAGTCCAACCTTCAGTACCTGGTCATTGAC AGGATATGGTGGTGCCAGGAAATGCAGGGTACTATAAACTGAGGCCAGAG ACAGCTGAGTCACTCTTTATTCTCCACCAAATCACGGGTGATCCAATCTA CCGAGAATGGAGCTGGAGTATATTTCAGGTTTGTACAACAATGAATTAAA TTCTGTCTCTAACAATAGTTTGTTAAATCCACTCAAGACTTCTTATGCTT GATTGAGTAAATTATAGCGTGTGTACAGCACAAGGTACTGAGTGTCCCAA AAGGGTTGTGAGAAACACTGCAAGTAAGTCCAAAAGGACTTGCACAACAT GTATGCACAACAAAATACGACAAGGCTTCAGATGGCTTGATTACTCTTAT AGATTAGATCAAGTGATTCACAACGAAGTGATTCACAACGAAGTGATTCA TTTAACTGTAAATACATTAAGTTAACACTGACACTGGTGCTACAGTGCTC TGGTCAAAAGGAATTAACATATGATACTTCATCCGTTTGGAATTAAATGT AACATAACTTTTGCAAGCATTGTTCTCGCTCAGGAACAATCCACATGATA AACCCTCTGGACGAGGCTTAGTTCTCATATAGATTAGGAGGTATGCAAAG TTTTATATGGTGTGCTGTTGTGACTGTGGAGGATCACCAGTGCAAAGTTG ACCTAGATGTGTTTGACAGGCTTCAAAAACCTCATGGAACTGTCAAAGTG GGTGTTTCTTGGGATGCCTAGGACAAAGCCCCCCCCCCCCCCCCATCGTT TGAGCAGCTTGCTCATCCTGTTATCACCCATTGCAGCTTGATCCCAATCT GATCCCAACTCTATCTTCAGCACAGAAGTCTGTCTGAGGTCAGGGATTGA ACACCCCAACAAAGAACAGTGTGGTGGCACGATGCCTGTAGGTGAGAGGA TGTGAGACTTGGATGCCATAGGGAAAAGTGGTGGCCATGGTGGCGGACTT TGAAATTTCCCGAATTGTCGTGTTTTATCATCTGAAGGAGTATAACAGCC AGATCACACGGGGTAAATGCGTGGACCTTGTATAAGATGTCACAAGGCGC GATGTGGCCACCGTACAAGTATCCTTGACGTTTGGGATATCTCATCAGTA TACCACACATCCTTCCACAAATGGGCAGCCAAAGCGGGGGTCTCCTTCGC CTCGTTGTGGGATATGTGCAAGCTTGAGAAGGTGAAGATCAAGTGGTGGA TTAAGCCAGTCCTCTCAGACCAGCAGAAAGTCAACAGGGTAGGTTTCATC ATCATTTAAACGCACAGGAGGGGAAGTGGGGTATTATTAGGTGTCTATTT GACTGGGTGGATGTGGATGAGAAGTGGTTTCACATCCTCATCAAAGATGA GTAAGATGTGTACCTGCATCCCACTGAGGACCCCCTCAAACCCCCACAGG CACAGAATAAGCGATACATTACAAAGGTGGTGTTTCGTGCAGCTGTGGTT CGATGGGAAAATCCGGATCTGGTCAATCATGGACACTAAGGTCACTCAGC GCTCCAAGGTGCTGGTGCCAGCTATGGTGGACGAGGAGAGGTACATATAG TTTATGATAGAGGATGTAAAGGGGGATCATGGAGGCAATCGGGAGGTGGT GGGGGATGAGATTGTCAGAGAGACCCAGCCAGCCAACTCACATGACCTCA TCACCAATGACCTGGGACTATTTCATTCCATAAAACAACTGAGGGAAGAC ATGGGGGTGACCCAACACAGAGGTGGCGGTGGAGGTCACAATGGAAGCGT TTGATGTGTGTACCCCCCCGCTAGACACTAGAGTGCGTCTGGCAGAGTCT CTTTGCAGTCTACAGTGAAGTGCTGGGGTCTAAGGTGACACTAAATTTCC CATCTTGGCAAGGGAAGTGCTAAAAGGTGGACATGCTCCCCTCGAATGGC CCAGTGGATGCGACAAAATACTGTGGTAAAATGGAATTTTGGAGGGCTTC AGGGGCAATTTCATAGATAGGTTAAGGCTGCCCCAATTTGGTTGAGATTT TGGTGGGCAAAGTTTTAGTGTCTACACAGTACACCCAGAAAATATGAACA TGGGTAAGAGAACTCTTGGAGAAGTTACGTTACTTTTAATTCACAACAGA AGTATCAATTTATGAAGGCACAACCTGCGGTCATGGCACCTTCCCTGACT GACACAACCCATTACAATATTTTCCAGTATGGTATCAGATCTGTTACCAG AGCATCATTCAACACCCTGCTATTGCTGTTGTTACACTATGCCGTTTGTT ATACCTCCCTACTCATGATGAACAAATTGTGTCCTCTACACTATCCAGTG ATTTTGTGGATTGTTCCTTTTGACATGTACATGTACACCTGGCTAACATT TCTACCGTTCATTGCTCAATAGATTGGTTTTTGTGTCAGCCCCACAGACA GGAGACCTTTTTGATCATTATGCAGTTGATCTTGTGAAGGATATACAGTC AATAAATGGATCCCTCCCCACACCCGTCTCCATTCCTCCAGGCAATTGAG AAGCACTGCAAGACACCAAATGGGTATGGCAGTCACCCTGATGTCAACAA CCCAAGTGCAAGGGCAGAGGACAACTTGGAATCTTTCTTCCTGGCAGAGA CTCTCAAATATCTCTTCCTCATTCAGGACCCTGACCATATTGTTGACCTT ACCAAAGTAGTCTTTAACACAGAAGCGCATCCCCTGCGGATCTTCTCAGA GACATGAGACTTGAGGGGTTCAAACCAGTGTTGTCTCCTCTAGGGATAGG GAGCCCTTTGTACTTGTAGATTAGCTTAAGTTCAGAGCAGCTTGTTGAAA TAGAAATATTTGAGGTGGGATGTGTGAATGAGGATATAGCACCAAGAGAA AGAGAGGATGGAAGATGTGTGATGTATATGCATAGTGTGTGTGAATTGAA CATAATATAACCCGAACCCAGGTTGGGATCTAGTCGTAGTACCTACACAC ACCTCATGAGAGTGCTCAAGTAAAAACAGCCAATTTTTGATATCGTGAAA CACTTTTGTTGACATCAGTTAGGAAAATCAAATTGGATTTTGGTGCGATT CAAAACATAACACAAGATACATCCCATACCTACCAGGACTCCTTAGTGCG TAACAGTAATTGATTGTTTTTGATGTTTGAGTTGGTACTGTTGAACTAGA CCTGAG
back to top

Coding sequence (CDS) from alignment at C-tenellus_contig1096:4152..13607-

>mRNA_C-tenellus_contig1096.5.1 ID=mRNA_C-tenellus_contig1096.5.1|Name=mRNA_C-tenellus_contig1096.5.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1479bp|location=Sequence derived from alignment at C-tenellus_contig1096:4152..13607- (Choristocarpus tenellus KU2346)
ATGACAGCAGAGGATTCAATAGGGTTAGGGTTAGGGACATACTCCTTCCG
CTATGAGGTGGTTGGCTATGATACTGACCTGAGGGATGGACTTACTAACA
CACAGGTCACTACAGAAATGAGAGAAGAGAGTGATAGGATAGGGAGAGAA
AGAGCAGCAAAGGTGAAGGCGGCCATGCAACATGTCTGGACTAATTACAG
ACAATATGCATGGGGTTGGGATGAACTCGCACCAAGGACTAAGAAGGGAA
AGAATCCATGGGGATCAATGGGAGTCACTCTTGTCGACTCGTTAGACACA
CTGTGGCTCATGGGCATGAAGGACGAGTTCTGGGAAGCAAGGGACTGGGT
AAGGGATAAACTGACATTTGACAAAGCCAACAGTGTGAGTGTCTTTGAGA
CCACCATCCGTGAGCTGGGAGGTCTCCTGTCTGCCTATGACCTCTCTGGG
GACAAGACTTTCCTAACCAAGGCCCAGATGCTAGGTGACAAGCTACTTCC
TGCCTTCAATACCAACAGTGGCCTTCCCACATCACATGTTAACTTTAAAA
GTGGAACAGCAAGAAGGTCTCAGTCAGTGCTGGCAGAGATAGGGACACTA
CAGGTTGAGTTTCGATACCTGAGCCATGCCACTGGTGACCCGAAGTATGC
CAACAAGGTCAATCATGTCTTTGAGCACTTAGCACAGATCGGTGGCAATC
ATGGACTTTATCCAATATACTTCAGTCCGACCAATGGCAGGTCAACCACA
ACACAGGTCACTCTTGGAGCACTAGGTGATTCATTCTATGAGTATCTCCT
CAAGGTCTGGTTACAGGGAGGAAAGACAGAGTCCACCTACAGAGATATGT
ATGACCGGGCTATGGATGGTGTGGCAGAAGTTCTGATCAAGAAGAGCAAT
CCCAGTGGGATGACCTTTGTCAGTGACTGGAACGGTTCTCGAAATATTAA
TAAGATGGACCATCTTGTGTGCTTCTTGGCTGGATCTTTGGCTCTAGGAT
CAACAACTCACGAAGACCCTGAGAAGGCTGAGCGTGACCTACGCCTTGCC
AAGGCGCTGGCATTCACTTGTTACAACATGTATTCTAGACAGAAGACAGG
CCTTGCTCCAGAGATGGTCAACTTCCGTGATGGGCAGGATATGGTGGTGC
CAGGAAATGCAGGGTACTATAAACTGAGGCCAGAGACAGCTGAGTCACTC
TTTATTCTCCACCAAATCACGGGTGATCCAATCTACCGAGAATGGAGCTG
GAGTATATTTCAGGCAATTGAGAAGCACTGCAAGACACCAAATGGGTATG
GCAGTCACCCTGATGTCAACAACCCAAGTGCAAGGGCAGAGGACAACTTG
GAATCTTTCTTCCTGGCAGAGACTCTCAAATATCTCTTCCTCATTCAGGA
CCCTGACCATATTGTTGACCTTACCAAAGTAGTCTTTAACACAGAAGCGC
ATCCCCTGCGGATCTTCTCAGAGACATGA
back to top